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Fix conda lock path
#4612JulianFlesch opened Nov 13, 2026Contributor
2
add nf-core completion command to set up shell tab completion
#4609mashehu opened Nov 12, 2026Member
3
modules lint: fail when a meta.yml conda lock_file does not exist
#4608pinin4fjords opened Nov 11, 2026Member3 tasks done
2
10BC8
add records and types to templates and meta.yml generator
#4602mashehu opened Nov 9, 2026Member
5
add architecture as parameter to nf-core pipelines download
#4601mashehu opened Nov 9, 2026Member 5.0.0
1
template: include container configs in nextflow.config
#4600mashehu opened Nov 9, 2026Member
1
convert pixi lock files to conda-lock files
#4599mashehu opened Nov 9, 2026Member 5.0.0
1
add type hints to commands
#4594mashehu opened Nov 5, 2026Member
16
limit get_wf_files to only consider files not ignored by git
#4593mashehu opened Nov 5, 2026Member
5
fix: allow underscores in GitHub username validation
#4582swastiktawate opened Nov 2, 2026
1
Update pre-commit hooks
#4577renovate[bot] opened Nov 1, 2026Bot1 task
2
Fix argument names in validate_file_md5, get_commit_info and init_mod_name docstrings
#4566mmporong opened Oct 28, 20261 of 4 tasks
2
Lock file maintenance
#4562renovate[bot] opened Oct 26, 2026Bot1 task
2
fix(modules): support container builds for installed nf-core modules
#4551Daesun-Ryu opened Oct 24, 20262 of 4 tasks
2
fix(component): fix included component names for external orgs
#4531prototaxites opened Oct 20, 2026Contributor1 of 4 tasks 4.3.0
1
Experimental: scaffold AWS full test output snapshots
#4524adamrtalbot opened Oct 16, 2026Contributor3 of 4 tasks
1
Overhaul pipeline template docs structure
#4522jfy133 opened Oct 16, 2026Member4 tasks
3
Resolve template merge conflicts in nf-core pipelines sync
#4519paulinefx opened Oct 15, 2026
4
Add ${params.XXX} and ${projectDir} interpolation when comparing schema and config default params values.
#4505LouisLeNezet opened Oct 8, 2026Contributor4 tasks 4.3.0
5
Add -w/--fail-warned to nf-core pipelines schema lint
#4503qiaobochi040726-source opened Oct 8, 2026 4.3.0
1
refractor: add nf-schema comment to the plugin import and sample sheet channel generation
#4497rarestpreet opened Oct 6, 20262 of 4 tasks 4.3.0
Add a pre-commit hook that disallows the .view() operator
#4496prototaxites opened Oct 5, 2026Contributor4 tasks
7
fix(lint): respect ignore_configs for multiqc_config's export_plots check
#4492jtremblay opened Oct 2, 20261 of 4 tasks
6
Skip included names that are not installed components when recreating installed_by
#4491pinin4fjords opened Oct 2, 2026Member4 tasks done
7
Template: add metro-map workflow diagram feature
#4478ewels opened Sep 21, 2026Member4 of 5 tasks 4.3.0
3

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All pull requests

Fix conda lock path

add `nf-core completion` command to set up shell tab completion

modules lint: fail when a meta.yml conda lock_file does not exist

add records and types to templates and meta.yml generator

add architecture as parameter to `nf-core pipelines download`

template: include container configs in nextflow.config

convert pixi lock files to conda-lock files

add type hints to commands

limit get_wf_files to only consider files not ignored by git

fix: allow underscores in GitHub username validation

Update pre-commit hooks

Fix argument names in validate_file_md5, get_commit_info and init_mod_name docstrings

Lock file maintenance

fix(modules): support container builds for installed nf-core modules

fix(component): fix included component names for external orgs

Experimental: scaffold AWS full test output snapshots

Overhaul pipeline template docs structure

Resolve template merge conflicts in `nf-core pipelines sync`

Add `${params.XXX}` and `${projectDir}` interpolation when comparing schema and config default params values.

Add -w/--fail-warned to nf-core pipelines schema lint

refractor: add nf-schema comment to the plugin import and sample sheet channel generation

Add a pre-commit hook that disallows the .view() operator

fix(lint): respect ignore_configs for multiqc_config's export_plots check

Skip included names that are not installed components when recreating installed_by

Template: add metro-map workflow diagram feature

Pull requests