| Tools and data services registry: a community effort to document bioinformatics resources J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ... Nucleic acids research 44 (D1), D38-D47, 2016 | 206 | 2016 |
| The complexity of multiple sequence alignment with SP-score that is a metric P Bonizzoni, G Della Vedova Theoretical Computer Science 259 (1-2), 63-79, 2001 | 190 | 2001 |
| Analysis of bacterial community composition by oligonucleotide fingerprinting of rRNA genes L Valinsky, G Della Vedova, AJ Scupham, S Alvey, A Figueroa, B Yin, ... Applied and Environmental Microbiology 68 (7), 3243-3250, 2002 | 179 | 2002 |
| The haplotyping problem: an overview of computational models and solutions P Bonizzoni, G Della Vedova, R Dondi, J Li Journal of Computer Science and Technology 18 (6), 675-688, 2003 | 162 | 2003 |
| Oligonucleotide fingerprinting of rRNA genes for analysis of fungal community composition L Valinsky, G Della Vedova, T Jiang, J Borneman Applied and Environmental Microbiology 68 (12), 5999-6004, 2002 | 121 | 2002 |
| Reconciling a gene tree to a species tree under the duplication cost model P Bonizzoni, G Della Vedova, R Dondi Theoretical computer science 347 (1-2), 36-53, 2005 | 120* | 2005 |
| Probe selection algorithms with applications in the analysis of microbial communities J Borneman, M Chrobak, G Della Vedova, A Figueroa, T Jiang ISMB (Supplement of Bioinformatics), 39-48, 2001 | 111 | 2001 |
| Computational graph pangenomics: a tutorial on data structures and their applications JA Baaijens, P Bonizzoni, C Boucher, G Della Vedova, Y Pirola, R Rizzi, ... Natural computing 21 (1), 81-108, 2022 | 74 | 2022 |
| On the approximation of correlation clustering and consensus clustering P Bonizzoni, G Della Vedova, R Dondi, T Jiang Journal of Computer and System Sciences 74 (5), 671-696, 2008 | 73* | 2008 |
| Overlap graphs and de Bruijn graphs: data structures for de novo genome assembly in the big data era R Rizzi, S Beretta, M Patterson, Y Pirola, M Previtali, G Della Vedova, ... Quantitative Biology 7 (4), 278-292, 2019 | 67 | 2019 |
| Inferring cancer progression from Single-Cell Sequencing while allowing mutation losses S Ciccolella, C Ricketts, M Soto Gomez, M Patterson, D Silverbush, ... Bioinformatics 37 (3), 326-333, 2021 | 60 | 2021 |
| ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events L Denti, R Rizzi, S Beretta, GD Vedova, M Previtali, P Bonizzoni BMC bioinformatics 19 (1), 444, 2018 | 57 | 2018 |
| Experimenting an approximation algorithm for the LCS P Bonizzoni, G Della Vedova, G Mauri Discrete Applied Mathematics 110 (1), 13-24, 2001 | 53 | 2001 |
| Exemplar longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, G Fertin, R Rizzi, S Vialette IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (4), 535-543, 2007 | 44 | 2007 |
| The k-Anonymity Problem Is Hard P Bonizzoni, G Della Vedova, R Dondi International Symposium on Fundamentals of Computation Theory, 26-37, 2009 | 43* | 2009 |
| Variants of constrained longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, Y Pirola Information Processing Letters 110 (20), 877-881, 2010 | 40 | 2010 |
| Beyond perfect phylogeny: Multisample phylogeny reconstruction via ilp P Bonizzoni, S Ciccolella, G Della Vedova, M Soto Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017 | 32 | 2017 |
| Triplet-based similarity score for fully multilabeled trees with poly-occurring labels S Ciccolella, G Bernardini, L Denti, P Bonizzoni, M Previtali, ... Bioinformatics 37 (2), 178-184, 2021 | 31 | 2021 |
| User‐only design to assess drug effectiveness in clinical practice: application to bisphosphonates and secondary prevention of fractures G Corrao, A Ghirardi, G Segafredo, A Zambon, G Della Vedova, F Lapi, ... Pharmacoepidemiology and drug safety 23 (8), 859-867, 2014 | 30 | 2014 |
| Modeling alternative splicing variants from RNA-Seq data with isoform graphs S Beretta, P Bonizzoni, GD Vedova, Y Pirola, R Rizzi Journal of Computational Biology 21 (1), 16-40, 2014 | 29* | 2014 |
Paola BonizzoniUniversity of Milano Bicocca Department of Informatics, Systems and CommunicationVerified email at unimib.it
