| The haplotyping problem: an overview of computational models and solutions P Bonizzoni, G Della Vedova, R Dondi, J Li Journal of Computer Science and Technology 18 (6), 675-688, 2003 | 162 | 2003 |
| Reconciling a gene tree to a species tree under the duplication cost model P Bonizzoni, GD Vedova, R Dondi Theoretical computer science 347 (1), 36-53, 2005 | 101 | 2005 |
| Stimulating knowledge discovery and sharing A Agostini, S Albolino, G De Michelis, F De Paoli, R Dondi Proceedings of the 2003 ACM International Conference on Supporting Group …, 2003 | 87 | 2003 |
| A novel method for signal transduction network inference from indirect experimental evidence R Albert, B DasGupta, R Dondi, S Kachalo, E Sontag, A Zelikovsky, ... Journal of Computational Biology 14 (7), 927-949, 2007 | 68 | 2007 |
| Kernel methods: support vector machines I Zoppis, G Mauri, R Dondi Encyclopedia of Bioinformatics and Computational Biology: ABC of …, 2019 | 61 | 2019 |
| HapCol: accurate and memory-efficient haplotype assembly from long reads Y Pirola, S Zaccaria, R Dondi, GW Klau, N Pisanti, P Bonizzoni Bioinformatics 32 (11), 1610-1617, 2016 | 59 | 2016 |
| On the approximation of correlation clustering and consensus clustering P Bonizzoni, G Della Vedova, R Dondi, T Jiang Journal of Computer and System Sciences 74 (5), 671-696, 2008 | 44 | 2008 |
| Exemplar longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, G Fertin, R Rizzi, S Vialette IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (4), 535-543, 2007 | 44 | 2007 |
| On the minimum error correction problem for haplotype assembly in diploid and polyploid genomes P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Journal of Computational Biology 23 (9), 718-736, 2016 | 43 | 2016 |
| The link between orthology relations and gene trees: a correction perspective M Lafond, R Dondi, N El-Mabrouk Algorithms for Molecular Biology 11 (1), 4, 2016 | 41 | 2016 |
| Variants of constrained longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, Y Pirola Information Processing Letters 110 (20), 877-881, 2010 | 40 | 2010 |
| Complexity issues in vertex-colored graph pattern matching R Dondi, G Fertin, S Vialette Journal of Discrete Algorithms 9 (1), 82-99, 2011 | 38 | 2011 |
| The binary perfect phylogeny with persistent characters P Bonizzoni, C Braghin, R Dondi, G Trucco Theoretical computer science 454, 51-63, 2012 | 37 | 2012 |
| Computational methods for resting-state EEG of patients with disorders of consciousness S Corchs, G Chioma, R Dondi, F Gasparini, S Manzoni, ... Frontiers in neuroscience 13, 807, 2019 | 33 | 2019 |
| Maximum motif problem in vertex-colored graphs R Dondi, G Fertin, S Vialette Annual Symposium on Combinatorial Pattern Matching, 221-235, 2009 | 33 | 2009 |
| Inferring (biological) signal transduction networks via transitive reductions of directed graphs R Albert, B DasGupta, R Dondi, E Sontag Algorithmica 51 (2), 129-159, 2008 | 31 | 2008 |
| Temporal networks in biology and medicine: a survey on models, algorithms, and tools MM Hosseinzadeh, M Cannataro, PH Guzzi, R Dondi Network Modeling Analysis in Health Informatics and Bioinformatics 12 (1), 10, 2022 | 30 | 2022 |
| Correlation clustering and consensus clustering P Bonizzoni, G Della Vedova, R Dondi, T Jiang International Symposium on Algorithms and Computation, 226-235, 2005 | 30 | 2005 |
| Polytomy refinement for the correction of dubious duplications in gene trees M Lafond, C Chauve, R Dondi, N El-Mabrouk Bioinformatics 30 (17), i519-i526, 2014 | 28 | 2014 |
| Top-k overlapping densest subgraphs: approximation algorithms and computational complexity R Dondi, MM Hosseinzadeh, G Mauri, I Zoppis Journal of Combinatorial Optimization 41 (1), 80-104, 2021 | 27 | 2021 |
Gianluca Della VedovaUniversità degli Studi di Milano-BicoccaVerified email at dellavedova.org
