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WO2012016172A3 - Genetically modified microbes producing increased levels of acetyl-coa derived compounds - Google Patents

Genetically modified microbes producing increased levels of acetyl-coa derived compounds Download PDF

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Publication number
WO2012016172A3
WO2012016172A3 PCT/US2011/045947 US2011045947W WO2012016172A3 WO 2012016172 A3 WO2012016172 A3 WO 2012016172A3 US 2011045947 W US2011045947 W US 2011045947W WO 2012016172 A3 WO2012016172 A3 WO 2012016172A3
Authority
WO
WIPO (PCT)
Prior art keywords
acetyl
genetically modified
derived compounds
increased levels
coa derived
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/US2011/045947
Other languages
French (fr)
Other versions
WO2012016172A2 (en
Inventor
Darren Platt
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Amyris Inc
Original Assignee
Amyris Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Amyris Inc filed Critical Amyris Inc
Publication of WO2012016172A2 publication Critical patent/WO2012016172A2/en
Publication of WO2012016172A3 publication Critical patent/WO2012016172A3/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/37—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi
    • C07K14/39—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi from yeasts
    • C07K14/395—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi from yeasts from Saccharomyces
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/52—Genes encoding for enzymes or proenzymes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P17/00—Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P5/00—Preparation of hydrocarbons or halogenated hydrocarbons
    • C12P5/007—Preparation of hydrocarbons or halogenated hydrocarbons containing one or more isoprene units, i.e. terpenes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P7/00—Preparation of oxygen-containing organic compounds
    • C12P7/64—Fats; Fatty oils; Ester-type waxes; Higher fatty acids, i.e. having at least seven carbon atoms in an unbroken chain bound to a carboxyl group; Oxidised oils or fats

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Biomedical Technology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Mycology (AREA)
  • Biophysics (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Medicinal Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Oil, Petroleum & Natural Gas (AREA)
  • Physics & Mathematics (AREA)
  • Plant Pathology (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

Provided herein are genetically modified microorganisms that produce increased amounts of acetyl-CoA derived compounds in industrial fermentation processes, and methods for making and using the same.
PCT/US2011/045947 2010-07-30 2011-07-29 Genetically modified microbes producing increased levels of acetyl-coa derived compounds Ceased WO2012016172A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US36954710P 2010-07-30 2010-07-30
US61/369,547 2010-07-30

Publications (2)

Publication Number Publication Date
WO2012016172A2 WO2012016172A2 (en) 2012-02-02
WO2012016172A3 true WO2012016172A3 (en) 2012-06-14

Family

ID=45530749

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2011/045947 Ceased WO2012016172A2 (en) 2010-07-30 2011-07-29 Genetically modified microbes producing increased levels of acetyl-coa derived compounds

Country Status (1)

Country Link
WO (1) WO2012016172A2 (en)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3741865B1 (en) 2014-09-18 2024-03-13 Genomatica, Inc. Non-natural microbial organisms with improved energetic efficiency
CA3084263A1 (en) 2017-12-07 2019-06-13 Zymergen Inc. Engineered biosynthetic pathways for production of (6e)-8-hydroxygeraniol by fermentation
CN111868047A (en) 2017-12-21 2020-10-30 齐默尔根公司 Nepeta hemiacetal oxidoreductase, Nepeta hemiacetal synthase, and nepetalactone-producing microorganisms
KR102343479B1 (en) * 2020-06-23 2021-12-27 한국생명공학연구원 Pichia ciferrii mutant strains Having Enhanced Spingoid Base and Sphingolipid Production And Preparation Method of the same
CN116926092B (en) * 2022-10-28 2024-04-26 昆明理工大学 Pantothenate kinase gene RkPank and application thereof

Non-Patent Citations (9)

* Cited by examiner, † Cited by third party
Title
"Production of Renewable Fuels and Chemicals in Genetically Engineered Saccharomyces cerevisiae.", BENJAMIN. POSTER 577B., July 2010 (2010-07-01), pages 220, Retrieved from the Internet <URL:http://www.yeast-meet.org/2010/pdf/book.pdf> [retrieved on 20120404] *
"UniProtKB/Swiss-Prot Direct Submission P38806.1.", CHROMATIN MODIFICATION-RELATED PROTEIN YNG2., 15 June 2010 (2010-06-15), Retrieved from the Internet <URL:http://www.ncbi.nlm.nih.gov/protein/731685?sat=138,satkey=55405> [retrieved on 20120404] *
LIN ET AL.: "A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation.", GENES & DEV., vol. 22, no. 15, 2008, pages 2062 - 2074 *
NOURANI ET AL.: "Recruitment of the NuA4 complex poises the PH05 promoter for chromatin remodeling and activation.", EMBO J., vol. 23, no. 13, 2004, pages 2597 - 2607 *
NOURANI ET AL.: "Role of an ING1 growth regulator in transcriptional activation and targeted histone acetylation by the NuA4 complex.", MOL CELL BIOL., vol. 21, no. 22, 2001, pages 7629 - 7640 *
RO ET AL.: "Production of the antimalarial drug precursor artemisinic acid in engineered yeast.", NATURE, vol. 440, no. 7086, 2006, pages 940 - 943 *
SELLECK ET AL.: "Recombinant protein complex expression in E. coli.", CURR PROTOC PROTEIN SCI., 2008 *
SELLECK ET AL.: "The Saccharomyces cerevisiae Piccolo NuA4 histone acetyltransferase complex requires the Enhancer of Polycomb A domain and chromodomain to acetylate nucleosomes.", MOL CELL BIOL, vol. 25, 2005, pages 5535 - 5542 *
ZHOU ET AL.: "SWR1 Complex Poises Heterochromatin Boundaries for Antisilencing Activity Propagation.", MOLECULAR AND CELLULAR BIOLOGY, vol. 30, no. 10, May 2010 (2010-05-01), pages 2391 - 2400 *

Also Published As

Publication number Publication date
WO2012016172A2 (en) 2012-02-02

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