| Nextstrain: real-time tracking of pathogen evolution J Hadfield, C Megill, SM Bell, J Huddleston, B Potter, C Callender, ... Bioinformatics 34 (23), 4121-4123, 2018 | 3662 | 2018 |
| Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples J Quick, ND Grubaugh, ST Pullan, IM Claro, AD Smith, K Gangavarapu, ... Nature protocols 12 (6), 1261-1276, 2017 | 1317 | 2017 |
| Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty G Baele, P Lemey, T Bedford, A Rambaut, MA Suchard, AV Alekseyenko Molecular biology and evolution 29 (9), 2157-2167, 2012 | 1225 | 2012 |
| The early spread and epidemic ignition of HIV-1 in human populations NR Faria, A Rambaut, MA Suchard, G Baele, T Bedford, MJ Ward, ... science 346 (6205), 56-61, 2014 | 1154 | 2014 |
| Persistent HIV-1 replication maintains the tissue reservoir during therapy R Lorenzo-Redondo, HR Fryer, T Bedford, EY Kim, J Archer, ... Nature 530 (7588), 51-56, 2016 | 791* | 2016 |
| Establishment and cryptic transmission of Zika virus in Brazil and the Americas NR Faria, J Quick, IM Claro, J Theze, JG de Jesus, M Giovanetti, ... Nature 546 (7658), 406-410, 2017 | 706 | 2017 |
| Global circulation patterns of seasonal influenza viruses vary with antigenic drift T Bedford, S Riley, IG Barr, S Broor, M Chadha, NJ Cox, RS Daniels, ... Nature 523 (7559), 217-220, 2015 | 669 | 2015 |
| Viral phylodynamics EM Volz, K Koelle, T Bedford PLoS computational biology 9 (3), e1002947, 2013 | 579 | 2013 |
| SARS-CoV-2 variants in patients with immunosuppression L Corey, C Beyrer, MS Cohen, NL Michael, T Bedford, M Rolland New England Journal of Medicine 385 (6), 562-566, 2021 | 532 | 2021 |
| Genetic diversity and protective efficacy of the RTS, S/AS01 malaria vaccine DE Neafsey, M Juraska, T Bedford, D Benkeser, C Valim, A Griggs, ... New England Journal of Medicine 373 (21), 2025-2037, 2015 | 530 | 2015 |
| Virus genomes reveal factors that spread and sustained the Ebola epidemic G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ... Nature 544 (7650), 309-315, 2017 | 528 | 2017 |
| Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2 P Lemey, A Rambaut, T Bedford, N Faria, F Bielejec, G Baele, CA Russell, ... PLoS pathogens 10 (2), e1003932, 2014 | 482 | 2014 |
| Integrating influenza antigenic dynamics with molecular evolution T Bedford, MA Suchard, P Lemey, G Dudas, V Gregory, AJ Hay, ... elife 3, e01914, 2014 | 469 | 2014 |
| Genomic epidemiology reveals multiple introductions of Zika virus into the United States ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ... Nature 546 (7658), 401-405, 2017 | 408 | 2017 |
| Ebola virus epidemiology, transmission, and evolution during seven months in Sierra Leone DJ Park, G Dudas, S Wohl, A Goba, SLM Whitmer, KG Andersen, ... Cell 161 (7), 1516-1526, 2015 | 366 | 2015 |
| Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus C Happi, I Adetifa, P Mbala, R Njouom, E Nakoune, A Happi, N Ndodo, ... PLoS Biology 20 (8), e3001769, 2022 | 350 | 2022 |
| Cryptic transmission of SARS-CoV-2 in Washington state T Bedford, AL Greninger, P Roychoudhury, LM Starita, M Famulare, ... Science 370 (6516), 571-575, 2020 | 325 | 2020 |
| SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse F Konings, MD Perkins, JH Kuhn, MJ Pallen, EJ Alm, BN Archer, ... Nature microbiology 6 (7), 821-823, 2021 | 324 | 2021 |
| Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California X Deng, W Gu, S Federman, L Du Plessis, OG Pybus, NR Faria, C Wang, ... Science 369 (6503), 582-587, 2020 | 324* | 2020 |
| MERS-CoV spillover at the camel-human interface G Dudas, LM Carvalho, A Rambaut, T Bedford elife 7, e31257, 2018 | 317 | 2018 |
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
