| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project E Birney, JA Stamatoyannopoulos, A Dutta, R Guigó, TR Gingeras, ... Nature 447 (7146), 799-816, 2007 | 6252 | 2007 |
| ViennaRNA Package 2.0 R Lorenz, SH Bernhart, C Höner zu Siederdissen, H Tafer, C Flamm, ... Algorithms for molecular biology 6 (1), 26, 2011 | 5895 | 2011 |
| RNA folding at elementary step resolution C Flamm, W Fontana, IL Hofacker, P Schuster Rna 6 (3), 325-338, 2000 | 430 | 2000 |
| The expansion of the metazoan microRNA repertoire J Hertel, M Lindemeyer, K Missal, C Fried, A Tanzer, C Flamm, ... BMC genomics 7 (1), 25, 2006 | 391 | 2006 |
| Partition function and base pairing probabilities of RNA heterodimers SH Bernhart, H Tafer, U Mückstein, C Flamm, PF Stadler, IL Hofacker Algorithms for Molecular Biology 1 (1), 3, 2006 | 374 | 2006 |
| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 305 | 2020 |
| ViennaRNA package 2.0. algorithms R Lorenz, SH Bernhart, C Höner zu Siederdissen, H Tafer, C Flamm, ... Mol Biol 6 (1), 26, 2011 | 261 | 2011 |
| Barrier trees of degenerate landscapes C Flamm, IL Hofacker, PF Stadler, MT Wolfinger Oldenbourg Wissenschaftsverlag GmbH 216 (2), 155, 2002 | 251 | 2002 |
| Design of multistable RNA molecules C Flamm, IL Hofacker, S Maurer-Stroh, PF Stadler, M Zehl Rna 7 (2), 254-265, 2001 | 224 | 2001 |
| Inverse problems in systems biology HW Engl, C Flamm, P Kügler, J Lu, S Müller, P Schuster Inverse Problems 25 (12), 123014, 2009 | 198 | 2009 |
| Automatic detection of conserved RNA structure elements in complete RNA virus genomes IL Hofacker, M Fekete, C Flamm, MA Huynen, S Rauscher, PE Stolorz, ... Nucleic acids research 26 (16), 3825-3836, 1998 | 190 | 1998 |
| Noisy: identification of problematic columns in multiple sequence alignments AWM Dress, C Flamm, G Fritzsch, S Grünewald, M Kruspe, SJ Prohaska, ... Algorithms for Molecular Biology 3 (1), 7, 2008 | 186 | 2008 |
| A graph-based toy model of chemistry G Benkö, C Flamm, PF Stadler Journal of Chemical Information and Computer Sciences 43 (4), 1085-1093, 2003 | 156 | 2003 |
| The SBML ODE Solver Library: a native API for symbolic and fast numerical analysis of reaction networks R Machné, A Finney, S Müller, J Lu, S Widder, C Flamm Bioinformatics 22 (11), 1406-1407, 2006 | 145 | 2006 |
| Secondary structure of the 3'-noncoding region of flavivirus genomes: comparative analysis of base pairing probabilities. S Rauscher, C Flamm, CW Mandl, FX Heinz, PF Stadler Rna 3 (7), 779-791, 1997 | 143 | 1997 |
| Efficient computation of RNA folding dynamics MT Wolfinger, WA Svrcek-Seiler, C Flamm, IL Hofacker, PF Stadler Journal of Physics A: Mathematical and General 37 (17), 4731, 2004 | 140 | 2004 |
| A generalized model of the repressilator S Müller, J Hofbauer, L Endler, C Flamm, S Widder, P Schuster Journal of mathematical biology 53 (6), 905-937, 2006 | 137 | 2006 |
| Folding kinetics of large RNAs M Geis, C Flamm, MT Wolfinger, A Tanzer, IL Hofacker, M Middendorf, ... Journal of molecular biology 379 (1), 160-173, 2008 | 109 | 2008 |
| A software package for chemically inspired graph transformation JL Andersen, C Flamm, D Merkle, PF Stadler International conference on graph transformation, 73-88, 2016 | 100 | 2016 |
| Evolutionary patterns of non-coding RNAs AF Bompfünewerer, C Flamm, C Fried, G Fritzsch, IL Hofacker, ... Theory in Biosciences 123 (4), 301-369, 2005 | 100 | 2005 |
Peter F StadlerProfessor of Bioinformatics, Univ. LeipzigVerified email at bioinf.uni-leipzig.de
