RU2612875C1 - Means for human tyrosyl-dna-phosphodiesterase 1 enzyme inhibition - Google Patents
Means for human tyrosyl-dna-phosphodiesterase 1 enzyme inhibition Download PDFInfo
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- 101000760764 Homo sapiens Tyrosyl-DNA phosphodiesterase 1 Proteins 0.000 title abstract description 5
- 102000046366 human TDP1 Human genes 0.000 title abstract description 4
- 230000005764 inhibitory process Effects 0.000 title 1
- ZYGHJZDHTFUPRJ-UHFFFAOYSA-N coumarin Chemical class C1=CC=C2OC(=O)C=CC2=C1 ZYGHJZDHTFUPRJ-UHFFFAOYSA-N 0.000 claims abstract description 5
- 230000002401 inhibitory effect Effects 0.000 claims description 5
- 102100024579 Tyrosyl-DNA phosphodiesterase 1 Human genes 0.000 claims description 4
- 101710205182 Tyrosyl-DNA phosphodiesterase 1 Proteins 0.000 claims description 3
- 230000001747 exhibiting effect Effects 0.000 claims 1
- 230000000694 effects Effects 0.000 abstract description 9
- 239000002246 antineoplastic agent Substances 0.000 abstract description 5
- 229940041181 antineoplastic drug Drugs 0.000 abstract description 3
- 238000011161 development Methods 0.000 abstract description 2
- 239000002532 enzyme inhibitor Substances 0.000 abstract 1
- 239000000126 substance Substances 0.000 abstract 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 32
- 150000001875 compounds Chemical class 0.000 description 22
- 101100483248 Drosophila melanogaster gkt gene Proteins 0.000 description 18
- 101150041808 TDP1 gene Proteins 0.000 description 18
- 239000003112 inhibitor Substances 0.000 description 10
- CPELXLSAUQHCOX-UHFFFAOYSA-M Bromide Chemical compound [Br-] CPELXLSAUQHCOX-UHFFFAOYSA-M 0.000 description 7
- 230000015572 biosynthetic process Effects 0.000 description 7
- 238000001460 carbon-13 nuclear magnetic resonance spectrum Methods 0.000 description 6
- 239000000706 filtrate Substances 0.000 description 6
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 6
- 239000000047 product Substances 0.000 description 6
- 238000000425 proton nuclear magnetic resonance spectrum Methods 0.000 description 6
- 238000003756 stirring Methods 0.000 description 6
- 238000003786 synthesis reaction Methods 0.000 description 6
- 206010028980 Neoplasm Diseases 0.000 description 5
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 4
- 101150041570 TOP1 gene Proteins 0.000 description 4
- 201000011510 cancer Diseases 0.000 description 4
- 238000006243 chemical reaction Methods 0.000 description 4
- 238000001953 recrystallisation Methods 0.000 description 4
- KMRMUZKLFIEVAO-UHFFFAOYSA-N 7,7-dimethylbicyclo[3.1.1]hept-3-ene-4-carbaldehyde Chemical compound C1C2C(C)(C)C1CC=C2C=O KMRMUZKLFIEVAO-UHFFFAOYSA-N 0.000 description 3
- KLWPJMFMVPTNCC-UHFFFAOYSA-N Camptothecin Natural products CCC1(O)C(=O)OCC2=C1C=C3C4Nc5ccccc5C=C4CN3C2=O KLWPJMFMVPTNCC-UHFFFAOYSA-N 0.000 description 3
- 102000004190 Enzymes Human genes 0.000 description 3
- 108090000790 Enzymes Proteins 0.000 description 3
- KMRMUZKLFIEVAO-RKDXNWHRSA-N Myrtenal Natural products C1[C@H]2C(C)(C)[C@@H]1CC=C2C=O KMRMUZKLFIEVAO-RKDXNWHRSA-N 0.000 description 3
- 108091034117 Oligonucleotide Proteins 0.000 description 3
- 229940127093 camptothecin Drugs 0.000 description 3
- VSJKWCGYPAHWDS-UHFFFAOYSA-N dl-camptothecin Natural products C1=CC=C2C=C(CN3C4=CC5=C(C3=O)COC(=O)C5(O)CC)C4=NC2=C1 VSJKWCGYPAHWDS-UHFFFAOYSA-N 0.000 description 3
- 238000001228 spectrum Methods 0.000 description 3
- -1 (1R, 5S) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl Chemical group 0.000 description 2
- KMRMUZKLFIEVAO-IUCAKERBSA-N (1s,5r)-6,6-dimethylbicyclo[3.1.1]hept-3-ene-4-carbaldehyde Chemical compound C1[C@@H]2C(C)(C)[C@H]1CC=C2C=O KMRMUZKLFIEVAO-IUCAKERBSA-N 0.000 description 2
- KDCGOANMDULRCW-UHFFFAOYSA-N 7H-purine Chemical compound N1=CNC2=NC=NC2=C1 KDCGOANMDULRCW-UHFFFAOYSA-N 0.000 description 2
- HBAQYPYDRFILMT-UHFFFAOYSA-N 8-[3-(1-cyclopropylpyrazol-4-yl)-1H-pyrazolo[4,3-d]pyrimidin-5-yl]-3-methyl-3,8-diazabicyclo[3.2.1]octan-2-one Chemical class C1(CC1)N1N=CC(=C1)C1=NNC2=C1N=C(N=C2)N1C2C(N(CC1CC2)C)=O HBAQYPYDRFILMT-UHFFFAOYSA-N 0.000 description 2
- FKLJPTJMIBLJAV-UHFFFAOYSA-N Compound IV Chemical compound O1N=C(C)C=C1CCCCCCCOC1=CC=C(C=2OCCN=2)C=C1 FKLJPTJMIBLJAV-UHFFFAOYSA-N 0.000 description 2
- 108020004414 DNA Proteins 0.000 description 2
- 102000053602 DNA Human genes 0.000 description 2
- 230000005778 DNA damage Effects 0.000 description 2
- 231100000277 DNA damage Toxicity 0.000 description 2
- 230000033616 DNA repair Effects 0.000 description 2
- MHAJPDPJQMAIIY-UHFFFAOYSA-N Hydrogen peroxide Chemical compound OO MHAJPDPJQMAIIY-UHFFFAOYSA-N 0.000 description 2
- 206010020751 Hypersensitivity Diseases 0.000 description 2
- 108020004682 Single-Stranded DNA Proteins 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- 230000004071 biological effect Effects 0.000 description 2
- VSJKWCGYPAHWDS-FQEVSTJZSA-N camptothecin Chemical compound C1=CC=C2C=C(CN3C4=CC5=C(C3=O)COC(=O)[C@]5(O)CC)C4=NC2=C1 VSJKWCGYPAHWDS-FQEVSTJZSA-N 0.000 description 2
- 210000004027 cell Anatomy 0.000 description 2
- 229940079593 drug Drugs 0.000 description 2
- 239000003814 drug Substances 0.000 description 2
- 239000003480 eluent Substances 0.000 description 2
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 description 2
- 108020004707 nucleic acids Proteins 0.000 description 2
- 102000039446 nucleic acids Human genes 0.000 description 2
- 150000007523 nucleic acids Chemical class 0.000 description 2
- GHMLBKRAJCXXBS-UHFFFAOYSA-N resorcinol Chemical compound OC1=CC=CC(O)=C1 GHMLBKRAJCXXBS-UHFFFAOYSA-N 0.000 description 2
- 238000010898 silica gel chromatography Methods 0.000 description 2
- 238000012360 testing method Methods 0.000 description 2
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 1
- ZJHZBDRZEZEDGB-UHFFFAOYSA-N 4-[5-(4-carbamimidoylphenyl)furan-2-yl]benzenecarboximidamide Chemical compound C1=CC(C(=N)N)=CC=C1C1=CC=C(C=2C=CC(=CC=2)C(N)=N)O1 ZJHZBDRZEZEDGB-UHFFFAOYSA-N 0.000 description 1
- IUWBZHKQPZGCOQ-LIRRHRJNSA-N 7-[[(1R,5S)-6,6-dimethyl-2-bicyclo[3.1.1]hept-2-enyl]methoxy]-2,3-dihydro-1H-cyclopenta[c]chromen-4-one Chemical compound CC1([C@H]2CC=C([C@@H]1C2)COC=1C=CC=2C3=C(C(OC=2C=1)=O)CCC3)C IUWBZHKQPZGCOQ-LIRRHRJNSA-N 0.000 description 1
- RKJQDNPEMZVHJE-YOEHRIQHSA-N 7-[[(1R,5S)-6,6-dimethyl-2-bicyclo[3.1.1]hept-2-enyl]methoxy]-4-methylchromen-2-one Chemical compound CC1([C@H]2CC=C([C@@H]1C2)COC1=CC=C2C(=CC(OC2=C1)=O)C)C RKJQDNPEMZVHJE-YOEHRIQHSA-N 0.000 description 1
- IUWBZHKQPZGCOQ-AUUYWEPGSA-N 7-[[(1S,5R)-6,6-dimethyl-2-bicyclo[3.1.1]hept-2-enyl]methoxy]-2,3-dihydro-1H-cyclopenta[c]chromen-4-one Chemical compound CC1([C@@H]2CC=C([C@H]1C2)COC=1C=CC=2C3=C(C(OC=2C=1)=O)CCC3)C IUWBZHKQPZGCOQ-AUUYWEPGSA-N 0.000 description 1
- RKJQDNPEMZVHJE-RHSMWYFYSA-N 7-[[(1S,5R)-6,6-dimethyl-2-bicyclo[3.1.1]hept-2-enyl]methoxy]-4-methylchromen-2-one Chemical compound CC1([C@@H]2CC=C([C@H]1C2)COC1=CC=C2C(=CC(OC2=C1)=O)C)C RKJQDNPEMZVHJE-RHSMWYFYSA-N 0.000 description 1
- 108010006654 Bleomycin Proteins 0.000 description 1
- 206010059866 Drug resistance Diseases 0.000 description 1
- 241000588724 Escherichia coli Species 0.000 description 1
- 238000005481 NMR spectroscopy Methods 0.000 description 1
- 102000004861 Phosphoric Diester Hydrolases Human genes 0.000 description 1
- 108090001050 Phosphoric Diester Hydrolases Proteins 0.000 description 1
- BPEGJWRSRHCHSN-UHFFFAOYSA-N Temozolomide Chemical compound O=C1N(C)N=NC2=C(C(N)=O)N=CN21 BPEGJWRSRHCHSN-UHFFFAOYSA-N 0.000 description 1
- 101710183280 Topoisomerase Proteins 0.000 description 1
- 150000004718 beta keto acids Chemical class 0.000 description 1
- 229960001561 bleomycin Drugs 0.000 description 1
- OYVAGSVQBOHSSS-UAPAGMARSA-O bleomycin A2 Chemical compound N([C@H](C(=O)N[C@H](C)[C@@H](O)[C@H](C)C(=O)N[C@@H]([C@H](O)C)C(=O)NCCC=1SC=C(N=1)C=1SC=C(N=1)C(=O)NCCC[S+](C)C)[C@@H](O[C@H]1[C@H]([C@@H](O)[C@H](O)[C@H](CO)O1)O[C@@H]1[C@H]([C@@H](OC(N)=O)[C@H](O)[C@@H](CO)O1)O)C=1N=CNC=1)C(=O)C1=NC([C@H](CC(N)=O)NC[C@H](N)C(N)=O)=NC(N)=C1C OYVAGSVQBOHSSS-UAPAGMARSA-O 0.000 description 1
- 239000003795 chemical substances by application Substances 0.000 description 1
- 238000002512 chemotherapy Methods 0.000 description 1
- 235000001671 coumarin Nutrition 0.000 description 1
- 150000004775 coumarins Chemical class 0.000 description 1
- 230000006378 damage Effects 0.000 description 1
- 238000009510 drug design Methods 0.000 description 1
- 150000002148 esters Chemical class 0.000 description 1
- DNJIEGIFACGWOD-UHFFFAOYSA-N ethyl mercaptane Natural products CCS DNJIEGIFACGWOD-UHFFFAOYSA-N 0.000 description 1
- VJJPUSNTGOMMGY-MRVIYFEKSA-N etoposide Chemical compound COC1=C(O)C(OC)=CC([C@@H]2C3=CC=4OCOC=4C=C3[C@@H](O[C@H]3[C@@H]([C@@H](O)[C@@H]4O[C@H](C)OC[C@H]4O3)O)[C@@H]3[C@@H]2C(OC3)=O)=C1 VJJPUSNTGOMMGY-MRVIYFEKSA-N 0.000 description 1
- 229960005420 etoposide Drugs 0.000 description 1
- 125000000623 heterocyclic group Chemical group 0.000 description 1
- 210000005260 human cell Anatomy 0.000 description 1
- 230000001771 impaired effect Effects 0.000 description 1
- 230000005865 ionizing radiation Effects 0.000 description 1
- 238000011813 knockout mouse model Methods 0.000 description 1
- 238000004949 mass spectrometry Methods 0.000 description 1
- 238000005259 measurement Methods 0.000 description 1
- 230000007246 mechanism Effects 0.000 description 1
- MBABOKRGFJTBAE-UHFFFAOYSA-N methyl methanesulfonate Chemical compound COS(C)(=O)=O MBABOKRGFJTBAE-UHFFFAOYSA-N 0.000 description 1
- 230000011987 methylation Effects 0.000 description 1
- 238000007069 methylation reaction Methods 0.000 description 1
- 229930003658 monoterpene Natural products 0.000 description 1
- 150000002773 monoterpene derivatives Chemical class 0.000 description 1
- 230000035772 mutation Effects 0.000 description 1
- 230000004770 neurodegeneration Effects 0.000 description 1
- 208000015122 neurodegenerative disease Diseases 0.000 description 1
- YBVNFKZSMZGRAD-UHFFFAOYSA-N pentamidine isethionate Chemical compound OCCS(O)(=O)=O.OCCS(O)(=O)=O.C1=CC(C(=N)N)=CC=C1OCCCCCOC1=CC=C(C(N)=N)C=C1 YBVNFKZSMZGRAD-UHFFFAOYSA-N 0.000 description 1
- 230000000144 pharmacologic effect Effects 0.000 description 1
- 239000013612 plasmid Substances 0.000 description 1
- 239000011541 reaction mixture Substances 0.000 description 1
- 230000022983 regulation of cell cycle Effects 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 230000001629 suppression Effects 0.000 description 1
- 229960004964 temozolomide Drugs 0.000 description 1
- 230000001225 therapeutic effect Effects 0.000 description 1
- 210000004881 tumor cell Anatomy 0.000 description 1
- DGVVWUTYPXICAM-UHFFFAOYSA-N β‐Mercaptoethanol Chemical compound OCCS DGVVWUTYPXICAM-UHFFFAOYSA-N 0.000 description 1
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
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- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C13/00—Cyclic hydrocarbons containing rings other than, or in addition to, six-membered aromatic rings
- C07C13/28—Polycyclic hydrocarbons or acyclic hydrocarbon derivatives thereof
- C07C13/32—Polycyclic hydrocarbons or acyclic hydrocarbon derivatives thereof with condensed rings
- C07C13/39—Polycyclic hydrocarbons or acyclic hydrocarbon derivatives thereof with condensed rings with a bicyclo ring system containing seven carbon atoms
- C07C13/42—Polycyclic hydrocarbons or acyclic hydrocarbon derivatives thereof with condensed rings with a bicyclo ring system containing seven carbon atoms with a bicycloheptene ring structure
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- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D311/00—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings
- C07D311/02—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings ortho- or peri-condensed with carbocyclic rings or ring systems
- C07D311/04—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring
- C07D311/22—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring with oxygen or sulfur atoms directly attached in position 4
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- C07D311/02—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings ortho- or peri-condensed with carbocyclic rings or ring systems
- C07D311/94—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings ortho- or peri-condensed with carbocyclic rings or ring systems condensed with rings other than six-membered or with ring systems containing such rings
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- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/335—Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin
- A61K31/35—Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin having six-membered rings with one oxygen as the only ring hetero atom
- A61K31/352—Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin having six-membered rings with one oxygen as the only ring hetero atom condensed with carbocyclic rings, e.g. methantheline
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Abstract
Description
Изобретение относится к молекулярной биологии, биохимии и биотехнологии, конкретно к соединениям, представляющим собой производные хроменона общей формулы I:The invention relates to molecular biology, biochemistry and biotechnology, specifically to compounds representing chromenone derivatives of the general formula I:
где, n=1 или 2,where, n = 1 or 2,
или II:or II:
у которых выявлена биологическая активность, заключающаяся в способности ингибировать действие фермента тирозил-ДНК-фосфодиэстеразы 1 человека (Tdp1).in which biological activity has been identified, consisting in the ability to inhibit the action of the enzyme tyrosyl DNA phosphodiesterase 1 person (Tdp1).
В последние годы ведутся активные поиски ингибиторов фермента тирозил-ДНК-фосфодиэстеразы 1 (Tdp1), который рассматривается как перспективный фермент-мишень при создании лекарственных препаратов для лечения онкологических и нейродегенеративных заболеваний [Cortes Ledesma, 2009].In recent years, active searches have been made for inhibitors of the enzyme tyrosyl DNA phosphodiesterase 1 (Tdp1), which is considered as a promising target enzyme in the development of drugs for the treatment of cancer and neurodegenerative diseases [Cortes Ledesma, 2009].
Tdp1 относится к классу фосфодиэстераз - ферментов, расщепляющих фосфодиэфирные связи [Interthal, 2001]. Tdp1 играет важную роль в удалении повреждений ДНК, создаваемых топоизомеразой 1 (Top1) в присутствии ее ингибитора камптотецина. Таким образом, Tdp1 противостоит ингибиторам Top1, которые являются достаточно эффективными противоопухолевыми препаратами [см. обзоры Pommier, 2010; Pommier, 2006]. Предполагается, что именно Tdp1 ответственна за лекарственную устойчивость некоторых видов рака [Dexheimer, 2008; Beretta, 2010]. Эта гипотеза подтверждается рядом исследований: мыши, нокаутные по Tdp1, и человеческие клеточные линии, имеющие мутацию SCAN1, гиперчувствительны к камптотецину [El-Khamisy, 2009; Das, 2009; Katyal, 2007; Hirano, 2007]. И, наоборот, в клетках с повышенным уровнем экспрессии Tdp1 камптотецин и этопозид вызывают меньше повреждений ДНК [Barthelmes, 2004; Nivens, 2004]. Таким образом, сочетание препаратов, воздействующих на Top1 и Tdp1, может существенно повысить эффективность химиотерапии. Терапевтическим эффектом ингибиторов Tdp1 может быть селективное увеличение активности ингибиторов Top1 в опухолях с нарушениями в процессах репарации ДНК и контроля клеточного цикла.Tdp1 belongs to the class of phosphodiesterases - enzymes that break down phosphodiester bonds [Interthal, 2001]. Tdp1 plays an important role in removing DNA damage caused by topoisomerase 1 (Top1) in the presence of its camptothecin inhibitor. Thus, Tdp1 resists Top1 inhibitors, which are quite effective antitumor drugs [see Pommier 2010 reviews Pommier, 2006]. Tdp1 is believed to be responsible for the drug resistance of certain types of cancer [Dexheimer, 2008; Beretta, 2010]. This hypothesis is supported by a number of studies: Tdp1 knockout mice and human cell lines having the SCAN1 mutation are hypersensitive to camptothecin [El-Khamisy, 2009; Das, 2009; Katyal, 2007; Hirano, 2007]. Conversely, in cells with increased Tdp1 expression, camptothecin and etoposide cause less DNA damage [Barthelmes, 2004; Nivens, 2004]. Thus, a combination of drugs acting on Top1 and Tdp1 can significantly increase the effectiveness of chemotherapy. The therapeutic effect of Tdp1 inhibitors can be a selective increase in the activity of Top1 inhibitors in tumors with impaired DNA repair and cell cycle control.
Кроме того, показано, что подавление активности Tdp1 делает опухолевые клетки гиперчувствительными к противораковом препаратам с другими механизмами действия: темозоломиду (метилирование пуринов) [Alagoz, 2013], метилметансульфонату (образование апуриновых/апиримидиновых сайтов), блеомицину (одноцепочечные/двухцепочечные разрывы с 3'-фосфогликолятами), перекиси водорода и ионизирующему излучению (разрывы и др. виды повреждений) [Murai, 2012].In addition, it was shown that suppression of Tdp1 activity makes tumor cells hypersensitive to anticancer drugs with other mechanisms of action: temozolomide (purine methylation) [Alagoz, 2013], methyl methanesulfonate (formation of apurine / apyrimidine sites), bleomycin (single-chain / double-chain breaks from 3 ' -phosphoglycolates), hydrogen peroxide and ionizing radiation (tears and other types of damage) [Murai, 2012].
В литературе описано немного ингибиторов Tdp1, и, как правило, они обладают умеренным ингибирующим действием (в диапазоне 100-1 мкМ) [Antony, 2007; Nguyen, 2012; Dexheimer, 2008; Zakharenko, 2015].A few Tdp1 inhibitors have been described in the literature, and as a rule, they have a moderate inhibitory effect (in the range of 100-1 μM) [Antony, 2007; Nguyen, 2012; Dexheimer, 2008; Zakharenko, 2015].
Наиболее близким к заявляемому средству – прототипом - является фурамидин, представляющий собой гетероциклический диамидин [Antony, 2007] общей формулы III:Closest to the claimed agent - the prototype - is furamidine, which is a heterocyclic diamidine [Antony, 2007] of the general formula III:
Недостатком известного средства являются неудовлетворительные ингибиторные характеристики (IС50 для одноцепочечной ДНК порядка 100 мкМ).A disadvantage of the known means is unsatisfactory inhibitory characteristics (IC 50 for single-stranded DNA of the order of 100 μm).
Задачей изобретения является создание более эффективного ингибитора Tdp1.An object of the invention is to provide a more effective Tdp1 inhibitor.
Поставленная техническая задача решается применением соединений, представляющих собой производные хроменона общей формулы I или II, у которых выявлена биологическая активность, заключающаяся в подавлении активности Tdp1.The stated technical problem is solved by the use of compounds representing chromenone derivatives of the general formula I or II, in which the biological activity of suppressing the activity of Tdp1 is revealed.
Соединения I и II могут быть синтезированы взаимодействием бромида IV с замещенными кумаринами V и VI в соответствии со следующей схемой:Compounds I and II can be synthesized by the reaction of bromide IV with substituted coumarins V and VI in accordance with the following scheme:
Соединение IV может быть синтезировано, например, из монотерпеноида миртеналя VII в соответствии со следующей схемой:Compound IV can be synthesized, for example, from monoterpenoid Myrtenal VII in accordance with the following scheme:
Для получения обоих энантиомеров соединения IV в качестве исходных соединений использовались (+)- и (-)-миртеналь (VII).To obtain both enantiomers of compound IV, (+) - and (-) - myrtenal (VII) were used as starting compounds.
Соединения Va, b и VI могут быть синтезированы, например, взаимодействием резорцина VIII с эфирами соответствующих β-кетокислот по следующей схеме:Compounds Va, b and VI can be synthesized, for example, by reacting resorcinol VIII with esters of the corresponding β-keto acids according to the following scheme:
Структура полученных соединений I и II подтверждена данными ЯМР-спектроскопии и масс-спектрометрии.The structure of the obtained compounds I and II was confirmed by NMR spectroscopy and mass spectrometry.
Результаты тестирования соединений Ia (n=1), Ib (n=2) и II приведены в таблице.The test results of compounds Ia (n = 1), Ib (n = 2) and II are shown in the table.
Технический результат: получен класс эффективных ингибиторов Tdp1 с хорошими ингибирующими характеристиками (IС50 для одноцепочечной ДНК от 0.13 до 1.6 мкМ).Technical result: a class of effective Tdp1 inhibitors with good inhibitory characteristics was obtained (IC 50 for single-stranded DNA from 0.13 to 1.6 μM).
В случае соединений Ia и II производные (+)-миртеналя оказались более активны, чем соответствующие (-)-энантиомеры, в то же время оба энантиомера соединения Ib проявили одинаковую активность.In the case of compounds Ia and II, derivatives of (+) - myrtenal were more active than the corresponding (-) - enantiomers, at the same time, both enantiomers of compound Ib showed the same activity.
Соединения общей формулы I и II, после проведения углубленных фармакологических исследований, могут использоваться для дальнейшей разработки новых высокоэффективных противораковых средств.Compounds of the general formula I and II, after conducting in-depth pharmacological studies, can be used to further develop new highly effective anti-cancer agents.
Ниже приводятся конкретные примеры реализации заявляемого технического решения.The following are specific examples of the implementation of the proposed technical solution.
Пример 1. Синтез 7-(((1R,5S)-6,6-диметилбицикло[3.1.1]гепт-2-ен-2-ил)метокси)-2,3-дигидроциклопента[с]хромен-4(1H)-она ((-)-Iа)Example 1. Synthesis of 7 - (((1R, 5S) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl) methoxy) -2,3-dihydrocyclopenta [c] chromene-4 (1H ) -one ((-) - Ia)
К 0.101 г (0.5 ммоль) соединения Va в 5 мл этанола прибавили 0.104 г (0.75 ммоль) K2СО3 и 0.161 г (0.75 ммоль) бромида (-)-IV при 25°С и перемешивании. Перемешивали при комнатной температуре 15 минут, затем нагревали при 80°С в течение 5 часов. Горячий раствор отфильтровали, фильтрат выдерживали при -10°С в течение 48 часов. Продукт (-)-Iа выделили перекристаллизацией из этанола, выход составил 0.067 г (40%).To 0.101 g (0.5 mmol) of compound Va in 5 ml of ethanol was added 0.104 g (0.75 mmol) of K 2 CO 3 and 0.161 g (0.75 mmol) of bromide (-) - IV at 25 ° С with stirring. Stirred at room temperature for 15 minutes, then heated at 80 ° C for 5 hours. The hot solution was filtered, the filtrate was kept at -10 ° C for 48 hours. The product (-) - Ia was isolated by recrystallization from ethanol, the yield was 0.067 g (40%).
Тпл=145°С, =-20.5 (EtOH, с=0.5). Спектр ЯМР 1Н (CDCl3, δ, м. д, J, Hz): 0.80 (с, 3Н, С22Н3); 1.16 (д, 1H, 2J=8.6, Н20а); 1,28 (с, 3Н, С21Н3); 2.10 (ддддд, 1Н, J17,19=J17,20s=5.6, J17,16a=J17,16s=2.9, J17,15=1.3, Н17); 2.13-2.20 (м, 2Н, 2Н11); 2.20 (ддд, 1Н, J19,17=J19,20s=5.6, J19,15=1.4, Н19); 2.25 (д. м, 1Н, 2J=18.0, H16s); 2.32 (д. м, 1Н, 2J=18.0, Н16а); 2.40 (ддд, 1Н, 2J=8.6, J20s,17=J20s,19=5.6, H20s); 2.84-2.88 (м, 2Н, 2Н10); 2.99-3.03 (м, 2Н, 2Н12); 4.42 (д. м, 1Н, 2J=12.4, другие J≤2.0, Н13); 4.44 (д. м, 1Н, 2J=12.4, другие J≤2.0, Н13'); 5.60-5.63 (м, 1Н, Н15), 6.82 (дд, 1Н, J7,6=8.6, J7,9=2.4, Н7); 6.85 (д, 1Н, J9,7=2.4, Н9); 7.29 (д, 1Н, J6,7=8.6, Н6). Спектр ЯМР 13С (CDCl3), δ, м. д.: 155.60 (с, С1); 160.48 (с, С2); 124.28 (с, С3); 156.23 (с, С4); 112.21 (с, С5); 125.28 (д, С6); 112.85 (д, С7); 161.29 (с, С8); 101.67 (д, С9); 30.24 (т, С10); 22.47 (т, С11); 31.93 (т, С12); 71.00 (т, С13); 143.07 (с, С14); 121.22 (д, С15); 31.17 (т, С16); 40.69 (д, С17); 37.99 (с, С18); 43.07 (д, С19); 31,39 (т, С20); 26.01 (к, С21); 20.97 (к, С22). Найдено: m/z=336.1722 [М]+ (С22Н24O3)+ Вычислено: m/z=336.1720.T PL = 145 ° C, = -20.5 (EtOH, s = 0.5). 1 H NMR spectrum (CDCl 3 , δ, ppm, J, Hz): 0.80 (s, 3H, C 22 H 3 ); 1.16 (d, 1H, 2 J = 8.6, H 20a ); 1.28 (s, 3H, C 21 H 3 ); 2.10 (ddddd, 1H, J 17.19 = J 17.20s = 5.6, J 17.16a = J 17.16s = 2.9, J 17.15 = 1.3, H 17 ); 2.13-2.20 (m, 2H, 2H 11 ); 2.20 (ddd, 1H, J 19.17 = J 19.20 s = 5.6, J 19.15 = 1.4, H 19 ); 2.25 (dm, 1H, 2 J = 18.0, H 16s ); 2.32 (dm, 1H, 2 J = 18.0, H 16a ); 2.40 (ddd, 1H, 2 J = 8.6, J 20s, 17 = J 20s, 19 = 5.6, H 20s ); 2.84-2.88 (m, 2H, 2H 10 ); 2.99-3.03 (m, 2H, 2H 12 ); 4.42 (d. M, 1H, 2 J = 12.4, other J≤2.0, H 13 ); 4.44 (d. M, 1H, 2 J = 12.4, others J≤2.0, H 13 ' ); 5.60-5.63 (m, 1H, H 15 ), 6.82 (dd, 1H, J 7.6 = 8.6, J 7.9 = 2.4, H 7 ); 6.85 (d, 1H, J 9.7 = 2.4, H 9 ); 7.29 (d, 1H, J 6.7 = 8.6, H 6 ). 13 C NMR spectrum (CDCl 3 ), δ, ppm: 155.60 (s, C 1 ); 160.48 (s, C 2 ); 124.28 (s, C 3 ); 156.23 (s, C 4 ); 112.21 (s, C 5 ); 125.28 (d, C 6 ); 112.85 (d, C 7 ); 161.29 (s, C 8 ); 101.67 (d, C 9 ); 30.24 (t, C 10 ); 22.47 (t, C 11 ); 31.93 (t, C 12 ); 71.00 (t, C 13 ); 143.07 (s, C 14 ); 121.22 (d, C 15 ); 31.17 (t, C 16 ); 40.69 (d, C 17 ); 37.99 (s, C 18 ); 43.07 (d, C 19 ); 31.39 (t, C 20 ); 26.01 (q, C 21 ); 20.97 (q, C 22 ). Found: m / z = 336.1722 [M] + (C 22 H 24 O 3 ) + Calculated: m / z = 336.1720.
Пример 2. Синтез 7-(((1S,5R)-6,6-диметилбицикло[3.1.1]гепт-2-ен-2-ил)метокси)-2,3-дигидроциклопента[с]хромен-4(1H)-она ((+)-Ia)Example 2. Synthesis of 7 - (((1S, 5R) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl) methoxy) -2,3-dihydrocyclopenta [c] chromene-4 (1H ) -one ((+) - Ia)
К 0.101 г (0.5 ммоль) соединения Va в 5 мл этанола прибавили 0.104 г (0.75 ммоль) K2CO3 и 0.161 г (0.75 ммоль) бромида (+)-IV при 25°С и перемешивании. Перемешивали при комнатной температуре 15 минут, затем нагревали при 80°С в течение 5 часов. Горячий раствор отфильтровали, фильтрат выдерживали при -10°С в течение 48 часов. Продукт (+)-Ia выделили перекристаллизацией из этанола, выход составил 0.093 г (55%).To 0.101 g (0.5 mmol) of compound Va in 5 ml of ethanol were added 0.104 g (0.75 mmol) of K 2 CO 3 and 0.161 g (0.75 mmol) of bromide (+) - IV at 25 ° С with stirring. Stirred at room temperature for 15 minutes, then heated at 80 ° C for 5 hours. The hot solution was filtered, the filtrate was kept at -10 ° C for 48 hours. The product (+) - Ia was isolated by recrystallization from ethanol, the yield was 0.093 g (55%).
Тпл=140°С. =+27.6 (EtOH, с=0.65). Спектры ЯМР 1Н и 13С соединения (+)-Ia соответствуют спектрам энантиомера (-)-Ia. Найдено: m/z=336.1718 [М]+ (С22Н24O3)+ Вычислено: m/z=336.1720. Mp = 140 ° C. = + 27.6 (EtOH, s = 0.65). 1 H and 13 C NMR spectra of the compound (+) - Ia correspond to the spectra of the enantiomer (-) - Ia. Found: m / z = 336.1718 [M] + (C 22 H 24 O 3 ) + Calculated: m / z = 336.1720.
Пример 3. Синтез 3-(((1R,5S)-6,6-диметилбицикло[3.1.1]гепт-2-ен-2-ил)метокси)-7,8,9,10-тетрагидро-6H-бензо[с]хромен-6-она ((-)-Ib)Example 3. Synthesis of 3 - (((1R, 5S) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl) methoxy) -7,8,9,10-tetrahydro-6H-benzo [s] chromen-6-one ((-) - Ib)
К 0.108 г (0.5 ммоль) соединения Vb в 5 мл этанола прибавили 0.104 г (0.75 ммоль) K2СО3 и 0.161 г (0.75 ммоль) бромида (-)-IV при 25°С и перемешивании. Перемешивали при комнатной температуре 15 минут, затем нагревали при 80°С в течение 5 часов. Горячий раствор отфильтровали, фильтрат выдерживали при -10°С в течение 48 часов. Продукт (-)-Ib выделили перекристаллизацией из этанола, выход составил 0.067 г (38%).To 0.108 g (0.5 mmol) of compound Vb in 5 ml of ethanol were added 0.104 g (0.75 mmol) of K 2 CO 3 and 0.161 g (0.75 mmol) of bromide (-) - IV at 25 ° С with stirring. Stirred at room temperature for 15 minutes, then heated at 80 ° C for 5 hours. The hot solution was filtered, the filtrate was kept at -10 ° C for 48 hours. The product (-) - Ib was isolated by recrystallization from ethanol, the yield was 0.067 g (38%).
Тпл=110°С. =-25.0 (EtOH, с=0.75). Спектр ЯМР 1Н (CDCl3, δ, м. д, J, Hz): 0.80 (с, 3Н, С23Н3); 1.16 (д, 1Н, 2J=8.7, Н21а); 1,27 (с, 3Н, С22Н3); 1.74-1.85 (м, 4Н, 2Н11, 2Н12); 2.09 (ддддд, 1Н, J18,20=J18,21s=5.6, J18,17a=J18,17s=2.8, J18,16=1.3, Н18); 2.20 (ддд, 1Н, J20,18=J20,21s=5.6, J20,16=1.4 Н20); 2.24 (д. м, 1Н, 2J=18.0, H17s); 2.32 (д. м, 1Н, 2J=18.0, Н17а); 2.39 (ддд, 1Н, 2J=8.7, J21s,18=J21s,20=5.6, H21s); 2.53 (т. м, 2Н, J10,11=6.3, 2Н10); 2.72 (т. м, 2Н, J13,12=6.3, 2Н13); 4.41 (д. м, 1Н, 2J=12.4, другие J≤2.0, Н14); 4.43 (д. м, 1Н, 2J=12.4, другие J≤2.0, Н14); 5.59-5.62 (м, 1H, Н16), 6.79 (д, 1Н, J9,7=2.4, Н9); 6.81 (дд, 1H, J7,6=8.7, J7,9=2.4, Н7); 7.40 (д, 1H, J6,7=8.7, Н6). Спектр ЯМР 13С (CDCl3), δ, м. д.: 153.30 (с, С1); 162.12 (с, С2); 120.29 (с, С3); 147.17 (с, С4); 113.54 (с, С5); 123.79 (д, С6); 112.62 (д, С7); 160.69 (с, С8); 101.49 (д, С9); 23.72 (т, С10); 21.60 (т, С11); 21.29 (т, С12); 25.10 (т, С13); 70.93 (т, С14); 143.12 (с, С15); 121.12 (д, С16); 31,16 (т, С17); 40.69 (д, С18); 37.98 (с, С19); 43.06 (д, С20); 31.38 (т, С21); 26.01 (к, С22), 20.96 (к, С23). Найдено: m/z=350.1875 [М]+ (С23Н26O3)+ Вычислено: m/z=350.1877. Mp = 110 ° C. = -25.0 (EtOH, s = 0.75). 1 H NMR spectrum (CDCl 3 , δ, ppm, J, Hz): 0.80 (s, 3H, C 23 H 3 ); 1.16 (d, 1H, 2 J = 8.7, H 21a ); 1.27 (s, 3H, C 22 H 3 ); 1.74-1.85 (m, 4H, 2H 11 , 2H 12 ); 2.09 (ddddd, 1H, J 18.20 = J 18.21 s = 5.6, J 18.17 a = J 18.17 s = 2.8, J 18.16 = 1.3, H 18 ); 2.20 (ddd, 1H, J 20.18 = J 20.21 s = 5.6, J 20.16 = 1.4 H 20 ); 2.24 ( dm , 1H, 2 J = 18.0, H 17s ); 2.32 (dm, 1H, 2 J = 18.0, H 17a ); 2.39 (ddd, 1H, 2 J = 8.7, J 21s, 18 = J 21s, 20 = 5.6, H 21s ); 2.53 (t, m, 2H, J 10.11 = 6.3, 2H 10 ); 2.72 (t, m, 2H, J 13.12 = 6.3, 2H 13 ); 4.41 (d. M, 1H, 2 J = 12.4, other J≤2.0, H 14 ); 4.43 (d. M, 1H, 2 J = 12.4, others J≤2.0, H 14 ); 5.59-5.62 (m, 1H, H 16 ), 6.79 (d, 1H, J 9.7 = 2.4, H 9 ); 6.81 (dd, 1H, J 7.6 = 8.7, J 7.9 = 2.4, H 7 ); 7.40 (d, 1H, J 6.7 = 8.7, H 6 ). 13 C NMR spectrum (CDCl 3 ), δ, ppm: 153.30 (s, C 1 ); 162.12 (s, C 2 ); 120.29 (s, C 3 ); 147.17 (s, C 4 ); 113.54 (s, C 5 ); 123.79 (d, C 6 ); 112.62 (d, C 7 ); 160.69 (s, C 8 ); 101.49 (d, C 9 ); 23.72 (t, C 10 ); 21.60 (t, C 11 ); 21.29 (t, C 12 ); 25.10 (t, C 13 ); 70.93 (t, C 14 ); 143.12 (s, C 15 ); 121.12 (d, C 16 ); 31.16 (t, C 17 ); 40.69 (d, C 18 ); 37.98 (s, C 19 ); 43.06 (d, C 20 ); 31.38 (t, C 21 ); 26.01 (q, C 22 ), 20.96 (q, C 23 ). Found: m / z = 350.1875 [M] + (C 23 H 26 O 3 ) + Calculated: m / z = 350.1877.
Пример 4. Синтез 3-(((1S,5R)-6,6-диметилбицикло[3.1.1]гепт-2-ен-2-ил)метокси)-7,8,9,10-тетрагидро-6H-бензо[с]хромен-6-она ((+)-Ib)Example 4. Synthesis of 3 - (((1S, 5R) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl) methoxy) -7,8,9,10-tetrahydro-6H-benzo [s] chromen-6-one ((+) - Ib)
К 0.108 г (0.5 ммоль) соединения Vb в 5 мл этанола прибавили 0.104 г (0.75 ммоль) K2СO3 и 0.161 г (0.75 ммоль) бромида (+)-IV при 25°С и перемешивании. Перемешивали при комнатной температуре 15 минут, затем нагревали при 80°С в течение 5 часов. Горячий раствор отфильтровали, фильтрат выдерживали при -10°С в течение 48 часов. Продукт (+)-Ib выделили перекристаллизацией из этанола, выход составил 0.067 г (38%).To 0.108 g (0.5 mmol) of compound Vb in 5 ml of ethanol were added 0.104 g (0.75 mmol) of K 2 CO 3 and 0.161 g (0.75 mmol) of bromide (+) - IV at 25 ° С with stirring. Stirred at room temperature for 15 minutes, then heated at 80 ° C for 5 hours. The hot solution was filtered, the filtrate was kept at -10 ° C for 48 hours. The product (+) - Ib was isolated by recrystallization from ethanol, the yield was 0.067 g (38%).
=+32.6 (EtOH, с=0.65). Спектры ЯМР 1Н и 13С соединения (+)-Ib соответствуют спектрам энантиомера (-)-Ib. Найдено: m/z=350.1872 [М]+ (С23Н26О3)+ Вычислено: m/z=350.1876. = + 32.6 (EtOH, s = 0.65). 1 H and 13 C NMR spectra of the compound (+) - Ib correspond to the spectra of the enantiomer (-) - Ib. Found: m / z = 350.1872 [M] + (C 23 H 26 O 3 ) + Calculated: m / z = 350.1876.
Пример 5. Синтез 7-(((1R,5S)-6,6-диметилбицикло[3.1.1]гепт-2-ен-2-ил)метокси)-4-метил-2H-хромен-2-она ((-)-II)Example 5. Synthesis of 7 - (((1R, 5S) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl) methoxy) -4-methyl-2H-chromen-2-one (( -) - II)
К 0.108 г (0.5 ммоль) соединения VI в 5 мл этанола прибавили 0.104 г (0.75 ммоль) K2СO3 и 0.132 г (0.75 ммоль) бромида (-)-IV при 25°С и перемешивании. Перемешивали при комнатной температуре 15 минут, затем нагревали при 80°С в течение 5 часов. Горячий раствор отфильтровали, фильтрат выдерживали при -10°С в течение 48 часов, упарили. Продукт (-)-II выделили колоночной хроматографией на силикагеле, элюент - раствор, содержащий от 25 до 100% хлороформа в гексане. Выход составил 0.084 г (54%).To 0.108 g (0.5 mmol) of compound VI in 5 ml of ethanol was added 0.104 g (0.75 mmol) of K 2 CO 3 and 0.132 g (0.75 mmol) of bromide (-) - IV at 25 ° С with stirring. Stirred at room temperature for 15 minutes, then heated at 80 ° C for 5 hours. The hot solution was filtered, the filtrate was kept at -10 ° C for 48 hours, and evaporated. The product (-) - II was isolated by silica gel column chromatography, and the eluent was a solution containing 25 to 100% chloroform in hexane. The yield was 0.084 g (54%).
Тпл=70°С. =-36 (EtOH, с=0.8). Спектр ЯМР 1Н (CDCl3, δ, м. д, J, Hz): 0.80 (с, 3Н, С20Н3); 1.17 (д, 1Н, 2J=8.7, Н18а); 1,28 (с, 3Н, С19Н3); 2.08-2.13 (м, 1Н, Н15); 2.20 (ддд, 1Н, J17,15=J17,18s=5.6, J17,13=1.4, Н17); 2.25 (д. м, 1Н, 2J=18.0, H14s); 2.33 (д. м, 1Н, 2J=18.0, Н14а); 2.35 (д, 3Н, J10,3=1.2, С10Н3); 2.40 (ддд, 1H, 2J=8.7, J18s,17=J18s,17=5.6, H18s); 4.43 (д. м, 1H, 2J=12.4, другие J≤2.0, Н11); 4.45 (д. м, 1Н, 2J=12.4, другие J≤2.0, Н11'); 5.60-5.63 (м, 1Н, Н13), 6.10 (к 1H, J3,10=1.2, Н3); 6.80 (д, 1H, J9,7=2.4, Н9); 6.83 (дд, 1Н, J7,6=8.7, J7,9=2.4, Н7); 7.44 (д, 1Н, J6,7=8.7, Н6). Спектр ЯМР 13С (CDCl3), δ, м. д.: 155.10 (с, С1); 161.28 (с, С2); 111.74 (с, С3); 152.44 (с, С4); 113.37 (с, С5); 125.21 (д, С6); 112.91 (д, С7); 161.96 (с, С8); 101.75 (д, С9); 18.51 (к, С10); 71.06 (т, С11); 142.96 (с, С12); 121.30 (д, С13); 31.18 (т, С14); 40.70 (д, С15); 37.99 (с, С16); 43.10 (д, С17); 31.39 (т, С18); 26.01 (к, С19); 20.96 (к, С20). Найдено: m/z=310.1564 [М]+ (С20Н22О3)+ Вычислено: m/z=310.1563. Mp = 70 ° C. = -36 (EtOH, c = 0.8). 1 H NMR Spectrum (CDCl 3 , δ, ppm, J, Hz): 0.80 (s, 3H, C 20 H 3 ); 1.17 (d, 1H, 2 J = 8.7, H 18a ); 1.28 (s, 3H, C 19 H 3 ); 2.08-2.13 (m, 1H, H 15 ); 2.20 (ddd, 1H, J 17.15 = J 17.18 s = 5.6, J 17.13 = 1.4, H 17 ); 2.25 (dm, 1H, 2 J = 18.0, H 14s ); 2.33 (d. M, 1H, 2 J = 18.0, H 14a ); 2.35 (d, 3H, J 10.3 = 1.2, C 10 H 3 ); 2.40 (ddd, 1H, 2 J = 8.7, J 18s, 17 = J 18s, 17 = 5.6, H 18s ); 4.43 (d. M, 1H, 2 J = 12.4, other J≤2.0, H 11 ); 4.45 (d. M, 1H, 2 J = 12.4, other J≤2.0, H 11 ' ); 5.60-5.63 (m, 1H, H 13 ), 6.10 (q 1H, J 3.10 = 1.2, H 3 ); 6.80 (d, 1H, J 9.7 = 2.4, H 9 ); 6.83 (dd, 1H, J 7.6 = 8.7, J 7.9 = 2.4, H 7 ); 7.44 (d, 1H, J 6.7 = 8.7, H 6 ). 13 C NMR spectrum (CDCl 3 ), δ, ppm: 155.10 (s, C 1 ); 161.28 (s, C 2 ); 111.74 (s, C 3 ); 152.44 (s, C 4 ); 113.37 (s, C 5 ); 125.21 (d, C 6 ); 112.91 (d, C 7 ); 161.96 (s, C 8 ); 101.75 (d, C 9 ); 18.51 (q, C 10 ); 71.06 (t, C 11 ); 142.96 (s, C 12 ); 121.30 (d, C 13 ); 31.18 (t, C 14 ); 40.70 (d, C 15 ); 37.99 (s, C 16 ); 43.10 (d, C 17 ); 31.39 (t, C 18 ); 01/26 (q, C 19 ); 20.96 (q, C 20 ). Found: m / z = 310.1564 [M] + (C 20 H 22 O 3 ) + Calculated: m / z = 310.1563.
Пример 6. Синтез 7-(((1S,5R)-6,6-диметилбицикло[3.1.1]гепт-2-ен-2-ил)метокси)-4-метил-2H-хромен-2-она ((+)-II)Example 6. Synthesis of 7 - (((1S, 5R) -6,6-dimethylbicyclo [3.1.1] hept-2-en-2-yl) methoxy) -4-methyl-2H-chromen-2-one (( +) - II)
К 0.108 г (0.5 ммоль) соединения VI в 5 мл этанола прибавили 0.104 г (0.75 ммоль) K2СO3 и 0.132 г (0.75 ммоль) бромида (+)-IV при 25°С и перемешивании. Перемешивали при комнатной температуре 15 минут, затем нагревали при 80°С в течение 5 часов. Горячий раствор отфильтровали, фильтрат выдерживали при -10°С в течение 48 часов, упарили. Продукт (+)-II выделили колоночной хроматографией на силикагеле, элюент - раствор, содержащий от 25 до 100% хлороформа в гексане. Выход составил 0.047 г (30%).To 0.108 g (0.5 mmol) of compound VI in 5 ml of ethanol was added 0.104 g (0.75 mmol) of K 2 CO 3 and 0.132 g (0.75 mmol) of bromide (+) - IV at 25 ° С with stirring. Stirred at room temperature for 15 minutes, then heated at 80 ° C for 5 hours. The hot solution was filtered, the filtrate was kept at -10 ° C for 48 hours, and evaporated. Product (+) - II was isolated by silica gel column chromatography, and the eluent was a solution containing from 25 to 100% chloroform in hexane. The yield was 0.047 g (30%).
=+36 (EtOH, с=0.8). Тпл=85°С. Спектры ЯМР 1Н и 13С соединения (+)-II соответствует спектрам энантиомера (-)-П. Найдено: m/z=310.1559 [М]+ (С20Н22О3)+ Вычислено: m/z=310.1563, = + 36 (EtOH, c = 0.8). Mp = 85 ° C. 1 H and 13 C NMR spectra of the compound (+) - II correspond to the spectra of the enantiomer (-) - P. Found: m / z = 310.1559 [M] + (C 20 H 22 O 3 ) + Calculated: m / z = 310.1563,
Пример 7. Исследование влияния предлагаемых соединений на активность Tdp1Example 7. The study of the effect of the proposed compounds on the activity of Tdp1
Рекомбинантная тирозил-ДНК-фосфодиэстераза 1 человека (КФ 3.1.4.) была экспрессирована в системе Escherichia coli (плазмида рЕТ 16B-Tdp1 любезно предоставлена доктором Кальдекотт К.У., Университет Сассекса, Великобритания) и выделена, как описано [Interthal, 2001].Recombinant human tyrosyl DNA phosphodiesterase 1 (EC 3.1.4.) Was expressed in the Escherichia coli system (plasmid pET 16B-Tdp1 kindly provided by Dr. Caldecott K.U., University of Sussex, UK) and isolated as described [Interthal, 2001 ].
В качестве тест-системы для определения ингибирующих свойств предлагаемых соединений использована реакция удаления тушителя флуоресценции Black Hole Quencher 1 (BHQ1) с 3'-конца олигонуклеотида, катализируемая Tdp1. На 5'-конце олигонуклеотида находится (5,6)-FAM - флуорофор, интенсивность флуоресценции которого возрастает при удалении тушителя. Для измерения флуоресценции использовался флуориметр POLARstar OPTIMA производства BMG LABTECH.As a test system for determining the inhibitory properties of the proposed compounds, the reaction of removing the Black Hole Quencher 1 fluorescence quencher (BHQ1) from the 3'-end of the oligonucleotide catalyzed by Tdp1 was used. At the 5'-end of the oligonucleotide is (5,6) -FAM - a fluorophore, the fluorescence intensity of which increases with the removal of the quencher. To measure fluorescence, a POLARstar OPTIMA fluorometer manufactured by BMG LABTECH was used.
Реакционные смеси объемом 200 мкл содержали буфер (50 мМ Tris-HCl, рН 8.0; 50 мМ NaCl; 7 мМ меркаптоэтанол), 50 нМ олигонуклеотид и различные концентрации ингибиторов. Реакция запускалась добавлением Tdp1 до конечной концентрации 1.3 нМ. Измерения проводились в линейном диапазоне зависимости скорости реакции от времени (до 8 минут) через каждые 55 секунд. Влияние предлагаемых соединений оценивали по величине IC50 (концентрация ингибитора, при которой активность фермента снижена наполовину). Обсчет значений IC50 проводился с помощью программы MARS Data Analisys 2.0 (BMG LABTECH).200 μl reaction mixtures contained a buffer (50 mM Tris-HCl, pH 8.0; 50 mM NaCl; 7 mM mercaptoethanol), 50 nM oligonucleotide, and various inhibitor concentrations. The reaction was started by adding Tdp1 to a final concentration of 1.3 nM. The measurements were carried out in a linear range of the reaction rate versus time (up to 8 minutes) every 55 seconds. The effect of the proposed compounds was evaluated by the value of IC 50 (the concentration of the inhibitor at which the enzyme activity is reduced by half). The calculation of IC 50 values was carried out using the MARS Data Analisys 2.0 program (BMG LABTECH).
Величины IC50 для изученных соединений приведены в таблице.IC 50 values for the compounds studied are shown in the table.
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| RU2787352C1 (en) * | 2022-03-21 | 2023-01-09 | Федеральное государственное бюджетное учреждение науки Новосибирский институт органической химии им. Н.Н. Ворожцова Сибирского отделения Российской академии наук (НИОХ СО РАН) | Derivatives of 7-hydroxycoumarin containing monoterpenoid residues as inhibitors of respiratory syncytial virus (rsv) reproduction |
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| RU2527269C2 (en) * | 2008-09-29 | 2014-08-27 | Cертрис Фармасьютикалз, Инк. | Chromenone analogues as sirtuin modulators |
| RU2013147736A (en) * | 2011-04-13 | 2015-05-20 | Астразенека Аб | CHROMENONIC COMPOUNDS AS PI3-KINASE INHIBITORS FOR TREATMENT OF CANCER |
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| RU2787352C1 (en) * | 2022-03-21 | 2023-01-09 | Федеральное государственное бюджетное учреждение науки Новосибирский институт органической химии им. Н.Н. Ворожцова Сибирского отделения Российской академии наук (НИОХ СО РАН) | Derivatives of 7-hydroxycoumarin containing monoterpenoid residues as inhibitors of respiratory syncytial virus (rsv) reproduction |
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