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EP1627078A1 - Procede d'immobilisation covalente de biomolecules de sonde sur des surfaces organiques - Google Patents

Procede d'immobilisation covalente de biomolecules de sonde sur des surfaces organiques

Info

Publication number
EP1627078A1
EP1627078A1 EP04738552A EP04738552A EP1627078A1 EP 1627078 A1 EP1627078 A1 EP 1627078A1 EP 04738552 A EP04738552 A EP 04738552A EP 04738552 A EP04738552 A EP 04738552A EP 1627078 A1 EP1627078 A1 EP 1627078A1
Authority
EP
European Patent Office
Prior art keywords
probe biomolecules
probe
biomolecules
organic
nucleic acid
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP04738552A
Other languages
German (de)
English (en)
Inventor
Holger Dr. Klapproth
Jürgen Rühe
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Individual
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of EP1627078A1 publication Critical patent/EP1627078A1/fr
Withdrawn legal-status Critical Current

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Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/54353—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals with ligand attached to the carrier via a chemical coupling agent

Definitions

  • the invention relates to a method for the covalent immobilization of probe biomolecules on organic surfaces such as polymer surfaces or surfaces of inorganic substrates modified with self-assembled monolayers using photoreactive crosslinkers with which the probe biomolecules are covalently immobilized on an organic surface, or on soluble polymers or Copolymers are covalently bound, which are then covalently immobilized on an organic surface.
  • SAMs self-assembled monolayers
  • SAMs bifunctional molecules
  • Linker « has been developed, via which sample molecules are specifically coupled or conjugated to the surface of the solid support, on which the detection is then also carried out with the aid of suitable markings (for example radioactive, colored, fluorescent).
  • bioconjugation conjugation of biological molecules
  • oligo- nucleotides or antibodies for example oligo- nucleotides or antibodies
  • bio-chips conjugation of biological molecules
  • the coupling to the carrier surface can take place directly or indirectly.
  • An example of an indirect coupling is the coupling of a nucleic acid sequence to be detected by hybridization to an immobilized, complementary oligonucleotide as a probe. In this case the use of the probe still has the advantage of the natural specificity of the interaction of biological macromolecules.
  • linkers are coupled to the sample or probe molecules via a suitable further functional group, for example an amino or epoxy group.
  • Suitable bifunctional linkers for coupling a large number of sample or probe molecules, in particular also of biological origin, to a large number of support surfaces are well known to the person skilled in the art, cf. for example, “Bioconjugate Techniques” by G. T. Hermanson, Academic Press 1996.
  • a disadvantage of these reactive (and therefore sensitive) surfaces is their often limited shelf life (a few weeks), so that they have to be stored in the absence of air.
  • the immobilization of, for example, nucleic acids on non-reactive polymer or plastic / plastic surfaces (e.g. as probes for the production of sensor / bio-chips) using conventional methods is complicated and requires a great deal of effort.
  • the object of the invention is therefore to provide a simple and quick method for the covalent immobilization of probe biomolecules on organic surfaces such as polymer surfaces or inorganic substrates modified with organic substances.
  • this object is achieved by a method for the covalent immobilization of probe biomolecules on organic surfaces such as polymer surfaces, in which
  • a probe biomolecule is provided, directly or indirectly via a spacer, with one or more photoreactive group (s) (“photocrosslinker”) (this can be terminally or laterally bound or an integral part of the chain of the biomolecule), and
  • reaction product from (a) is applied to an organic surface such as a polymer surface (for example by printing) and is covalently immobilized thereon by irradiation with light of a suitable wavelength (for example UV light), or the reaction product from (a ) is bound to a soluble (eg water-soluble) polymer or copolymer, which is then immobilized on a surface consisting of organic molecules, such as a polymer surface.
  • an organic surface such as a polymer surface (for example by printing) and is covalently immobilized thereon by irradiation with light of a suitable wavelength (for example UV light), or the reaction product from (a ) is bound to a soluble (eg water-soluble) polymer or copolymer, which is then immobilized on a surface consisting of organic molecules, such as a polymer surface.
  • this object is achieved by a process for the covalent immobilization of probe biomolecules on organic surfaces such as polymer surfaces, in which a) a soluble (for example water-soluble) polymer or copolymer with reactive groups is produced and, after the polymerization, oligomers or polymers with or several photoreactive group (s) (the photoreactive group can be terminally or laterally bound or be an integral part of the chain) and probe or receptor biomolecules (to which a target biomolecule to be detected can bind) are covalently bound, or
  • reaction product from (a) or (b) is applied to an organic surface such as a polymer surface (e.g. by printing) and is covalently immobilized thereon by irradiation with light (e.g. UV light) of a suitable wavelength.
  • organic surface such as a polymer surface (e.g. by printing) and is covalently immobilized thereon by irradiation with light (e.g. UV light) of a suitable wavelength.
  • light e.g. UV light
  • the advantage of the invention lies in the possibility of printing a viscous medium, for example the reaction product of steps (a) or (b) of the alternative process defined above, on inactive surfaces (for example silanized glass substrates or substrates made of commercially available plastics) is very easy to immobilize, namely by irradiation with light of a suitable wavelength.
  • this process significantly increases the amount of analyte that can be coupled, since it is a pseudo-three-dimensional one Matrix is built.
  • Classic problems of three-dimensional matrices such as, for example, gradient effects of the medium when printing on polymer gels, are additionally solved in this way.
  • Reactive surfaces are, for example, surfaces with epoxy, aldehyde or amino functions. Reactive surfaces often have a limited shelf life (a few weeks) and must be stored in an air-tight environment. No reactive surface means that supports made of e.g. polystyrene or polymethyl methacrylate (PMMA) can be used, which are stable for years. Another advantage is that, for example, the polymer surfaces do not have to be hydrophilized by upstream process steps, such as plasma processes, since the accessibility of the surface, for example in the alternative embodiment of the method according to the invention defined above, is established by the coupled (swellable, wettable) copolymer. Apart from this, the surface properties of the substrate (eg the sensor surface) can also be controlled very precisely in a simple manner.
  • An example of an important surface property that can be easily checked using the method described here is wettability.
  • a further advantage is the simplified analysis, since in principle only that the volume of the drop applied has to be determined and the number of immobilized probes results directly therefrom. This is not a trivial undertaking in the prior art methods for binding DNA to SAMs, for example.
  • the invention further relates to an organic surface such as a polymer surface with covalently immobilized thereon, preferably with pattern formation (for example by printing) Probe biomolecules, which can be obtained by a method defined above.
  • the invention further specifies the use of an organic surface such as a polymer surface with probe biomolecules immobilized thereon with pattern formation as a sensor chip and, according to a further embodiment, also relates to a medical or diagnostic instrument that an organic surface according to the invention such as a polymer surface or a thus obtained sensor chip.
  • the photoreactive group (s) can be selected from benzophenone or derivatives thereof, anthraquinone or derivatives thereof and thymidine or derivatives thereof.
  • Suitable reactive groups are, for example, epoxy, carboxy, active ester, isocyanate, maleimide, isothiocyanate and azlactone groups.
  • the soluble polymer or copolymer with reactive groups e.g. by copolymerization of
  • the photoreactive oligomers or polymers are covalently bound in step (a) 5'-amino modified oligothymidine and the probe biomolecules formed by covalent binding of 5 'amino modified probe biomolecules.
  • the amino modification can be a primary amino group.
  • the photoreactive oligomers or polymers and the probe or receptor biomolecules in no way have to be modified in the same way, for example 5′-amino modified, in order to be able to be covalently bound to the soluble polymer or copolymer.
  • the alternative method according to the invention is only particularly simple to carry out.
  • the group used for the modification is not subject to any particular restrictions, but is selected in accordance with the practical circumstances. For example, carboxy or thio modification is also possible.
  • 5'-aryl-modified oligothymidine and 5'-aryl or 3 '-modified probe biomolecules are copolymerized with one or more acrylate (s) or methacrylet (s) in step (b).
  • 4-methacryloyloxybenzophenone and 5'-aryl- or 3'-modified probe biomolecules are copolymerized with one or more acrylate (s) or methacrylate (s) in step (b).
  • the photoreactive group (s) is ultraviolet reactive.
  • the methods are used directly or indirectly with photoreactive groups.
  • Suitable organic surfaces for the process according to the invention are e.g. Polymer surfaces such as surfaces made of cycloolefin copolymers (COCs), polystyrene, polyethylene, polypropylene or polymethyl methacrylate (PMMA, plexiglass).
  • COC cycloolefin copolymers
  • PMMA polymethyl methacrylate
  • a suitable COC is, for example, that sold by Ticona under the trade name »Topas «.
  • the process according to the invention is suitable for any organic surface, depending on the photoreactive groups used.
  • Surfaces coated with organic molecules, such as inorganic substrates coated with self-assembled monolayers (SAMs), are therefore also suitable. These SAMs themselves can be completely unreactive and can therefore consist, for example, of pure alkylsilanes.
  • the probe biomolecule can, for example, be a partner of a specifically interacting system of complementary binding partners (receptor / ligand).
  • a specifically interacting system of complementary binding partners can, for example, on the interaction of a nucleic acid with a complementary nucleic acid, the interaction of a peptide nucleic acid (PNA) with a nucleic acid, the enzyme / substrate, receptor / effector, lectin / - Sugar, antibody / antigen, avidin / biotin or streptavidin / biotin interaction are based.
  • PNA peptide nucleic acid
  • nucleic acid can be a DNA or RNA, e.g. an oligonucleotide or an aptamer or also a so-called »LNA « as offered at www.proligo.com or a single polymerizable DNA as offered under the trade name »Acrydite « at www.mosaic-technologies.com.
  • PNAs Peptide nucleic acids
  • the antibody can be, for example, a polyclonal, monoclonal, chimeric or "single-chain” antibody or a functional fragment or derivative (by "functional” it is meant that the fragment / derivative bind an antigen can act without such immunogenicity) of such an antibody.
  • a suitable copolymer can be obtained, for example, by copolymerizing methacrylic acid and glycidyl methacrylate in a 1:20 (mol / mol) mixture by adding 1% AIBN (azobisisobutyronitrile) in a solution of the monomers in a suitable solvent (e.g. 10% (v / v) monomers in chloroform) are prepared.
  • AIBN azobisisobutyronitrile
  • the resulting copolymer can be separated by precipitation with diethyl ether.
  • a photoreactive side group can be inserted, for example, by adding 5'-amino-modified oligothymidine.
  • amino-modified nucleic acid such as DNA can now be bound to unreacted glycidyl residues or added simultaneously with the oligothymidine, so that a competitive reaction takes place between the oligothymidine and the nucleic acid / DNA.
  • the amino-modified nucleic acid / DNA can be coupled to the polymer, for example in an aqueous sodium phosphate solution at pH 9.
  • the copolymer substituted in this way can now be measured (to determine the DNA content) and printed on almost any organic polymer surface as a substrate.
  • the polymer is immobilized via UV radiation at 260 nm.
  • a copolymer is formed from a UV reactive group monomer, a reactive monomer and a hydrophilic (non-reactive) monomer.
  • a UV reactive group monomer For example, 4-methacryloyloxybenzophenone, glycidoxymethacrylate and methacrylic acid.
  • a 50 nm thick layer of this polymer is produced on a PMMA substrate.
  • the polymer is immobilized here exclusively via a photo-induced coupling reaction between the benzophenone groups contained in the polymer and the substrate, triggered by UV radiation at 300 nm.

Landscapes

  • Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Biomedical Technology (AREA)
  • Chemical & Material Sciences (AREA)
  • Hematology (AREA)
  • Urology & Nephrology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Cell Biology (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)

Abstract

L'invention concerne un procédé d'immobilisation covalente de biomolécules de sonde sur des surfaces organiques au moyen d'agents réticulants photoréactifs permettant d'immobiliser les biomolécules de sonde de façon covalente sur une surface organique, ou de lier lesdites biomolécules de façon covalente à des polymères ou des copolymères solubles qui sont ensuite immobilisés de façon covalente sur une surface organique.
EP04738552A 2003-05-22 2004-05-24 Procede d'immobilisation covalente de biomolecules de sonde sur des surfaces organiques Withdrawn EP1627078A1 (fr)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
DE10323685A DE10323685A1 (de) 2003-05-22 2003-05-22 Verfahren zur kovalenten Immobilisierung von Sonden-Biomolekülen an organischen Oberflächen
PCT/DE2004/001083 WO2004104223A1 (fr) 2003-05-22 2004-05-24 Procede d'immobilisation covalente de biomolecules de sonde sur des surfaces organiques

Publications (1)

Publication Number Publication Date
EP1627078A1 true EP1627078A1 (fr) 2006-02-22

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EP04738552A Withdrawn EP1627078A1 (fr) 2003-05-22 2004-05-24 Procede d'immobilisation covalente de biomolecules de sonde sur des surfaces organiques

Country Status (4)

Country Link
US (1) US20070154888A1 (fr)
EP (1) EP1627078A1 (fr)
DE (2) DE10323685A1 (fr)
WO (1) WO2004104223A1 (fr)

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US20050153309A1 (en) 2003-12-22 2005-07-14 David Hoon Method and apparatus for in vivo surveillance of circulating biological components
EP2236524B1 (fr) 2009-03-30 2015-09-16 SuSoS AG Promoteur d'adhésion à base d'une macromolécule functionalisée comprenant des groupes photoréactifs
SG10202012275PA (en) 2016-06-09 2021-01-28 Haimachek Inc Collector for detection and reversible capturing of cells from body fluids in vivo
KR102247290B1 (ko) * 2018-07-27 2021-04-30 주식회사 엘지화학 바인더 수지, 감광성 수지 조성물, 감광재, 컬러필터 및 디스플레이 장치
KR102216766B1 (ko) * 2018-11-23 2021-02-16 주식회사 엘지화학 감광성 수지 조성물, 감광재, 컬러필터 및 디스플레이 장치
WO2021168511A1 (fr) * 2020-02-25 2021-09-02 Commonwealth Scientific And Industrial Research Organisation Dispositif microfluidique pour l'étude des interactions de substances avec des cellules
DE102020001916B3 (de) 2020-03-24 2021-08-12 Ava Lifescience Gmbh Mikropartikel für bioanalytische Untersuchungen und Verfahren zum Herstellen eines solchen Mikropartikels

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WO1999008717A2 (fr) * 1997-08-15 1999-02-25 Surmodics, Inc. Polymeres reactifs latents avec fractions biologiquement actives

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CA2217053C (fr) * 1995-04-07 2010-11-30 Mogens Havsteen Jacobsen Procede d'immobilisation photochimique de ligands a l'aide de quinones
AU730633B2 (en) * 1996-05-29 2001-03-08 Phillip Belgrader Detection of nucleic acid sequence differences using coupled ligase detection and polymerase chain reactions
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AU5805900A (en) * 1999-07-07 2001-01-30 Exiqon A/S Synthesis of stable quinone and photoreactive ketone phosphoramidite reagents for solid phase synthesis of photoreactive-oligomer conjugates
CA2335377C (fr) * 2001-03-05 2010-12-14 Bioneer Corporation Micropuce biomoleculaire et processus de fabrication connexe
DE60235491D1 (de) * 2001-11-28 2010-04-08 Bio Rad Laboratories Paralleles scoring von polymorphismen mittels amplifikation und fehlerkorrektur
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US7354706B2 (en) * 2003-09-09 2008-04-08 The Regents Of The University Of Colorado, A Body Corporate Use of photopolymerization for amplification and detection of a molecular recognition event
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WO1999008717A2 (fr) * 1997-08-15 1999-02-25 Surmodics, Inc. Polymeres reactifs latents avec fractions biologiquement actives

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Also Published As

Publication number Publication date
DE10323685A1 (de) 2004-12-09
US20070154888A1 (en) 2007-07-05
DE112004001421D2 (de) 2006-04-13
WO2004104223A1 (fr) 2004-12-02

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