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rna-splicing

Here are 5 public repositories matching this topic...

GuangyuWangLab2021 / cellDancer

Predict RNA velocity through deep learning

transcriptomics single-cell-genomics single-cell-rna-seq rna-velocity-estimation rna-velocity cell-fate rna-splicing rna-splicing-analysis

Updated Dec 12, 2023
Jupyter Notebook

pyrovelocity

pinellolab / pyrovelocity

𝒫robabilistic modeling of RNA velocity ⬱

probabilistic-programming transcriptomics pyro probabilistic-models single-cell-genomics single-cell-rna-seq rna-velocity-estimation multiomics deep-generative-model developmental-trajectories rna-velocity rna-splicing single-cell-multiomics cell-fate-determination rna-splicing-analysis

Updated Nov 12, 2024
Python

Xinglab / IRIS

IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening

rna-seq immunotherapy neoantigen rna-splicing tumor-antigen

Updated Aug 20, 2024
Python

jalwillcox / Calculate-PSI

A script used to calculate percent spliced-in (PSI) values from bulk RNA sequencing data.

rna-seq rnaseq psi rna-seq-analysis bulk-rna-seq splicing rna-splicing percent-spliced-in rna-splicing-analysis

Updated May 27, 2022
Shell

SoniaRuiz / introverse

A database of introns and alternative splicing events across human tissues

database sqlite-database alternative-splicing transcriptomics introns rna-splicing recount3 gtexv8 novel-annotation

Updated Jul 8, 2023
HTML

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