Python library to handle Gene Ontology (GO) terms
Gene set variation analysis
Differential expression analysis for single-cell RNA-seq data.
A Snakemake workflow and MrBiomics module for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, pycisTarget and RcisTarget.
mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
Gene Set Clustering based on Functional annotation
Julia implementation of the next generation GSEA 🏔️
A Tidy Framework to Hack Gene Expression Signatures
Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
piano - An R/Bioconductor package for gene set analysis
Flexible gene set enrichment analysis
This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
Package to gather gene information, annotations, and functions
A library for differential expression and gene set enrichment analysis based on hydra and pydantic.
Integration of pathway-related information from MSigDB in BEL
Assessing dIfferential expression, dispersion, distribution analyses on TCGA tumour-normal RNA-seq datasets
Experimental version of data package associated with chipenrich
AskoR pipeline: analysis of gene expression data, using edgeR.
Testing, development environment for a new project of KN BIBS
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