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Rebranding (name change)
#102 · jblachly opened on Aug 31, 2021
4

GFF3Reader can't handle with comment lines in middle of file
blachlylab/dhtslib#140 · opened on Jan 7, 2023
VCFRecord.filter doesn't return correct set of filters
blachlylab/dhtslib#139 · opened on Aug 30, 2022
2
Rework reader/writers to use HtslibIterator and HtslibFile across dhtslib
blachlylab/dhtslib#133 · opened on Feb 23, 2022
Update bindings to htslib 1.15
blachlylab/dhtslib#132 · opened on Feb 23, 2022 · v0.14.2+htslib-1.15
bam_aux_update_int fails non-deterministically
blachlylab/dhtslib#127 · opened on Dec 31, 2021
Version check warning
blachlylab/dhtslib#120 · opened on Oct 22, 2021
1
Update bindings to htslib 1.14
blachlylab/dhtslib#118 · opened on Oct 22, 2021 · v0.14.1+htslib-1.14
Get valid coordinates from Interval
blachlylab/dhtslib#115 · opened on Oct 1, 2021 · v0.14.1+htslib-1.14
1
GFF3 coordinate offsets don't make sense
blachlylab/dhtslib#112 · opened on Oct 1, 2021 · v0.14.1+htslib-1.14
3
Convert integration unit tests to true unit tests
blachlylab/dhtslib#106 · opened on Sep 7, 2021
Rebranding (name change)
blachlylab/dhtslib#102 · opened on Aug 31, 2021
4
Interval (and Coordinate) should probably include contig name
blachlylab/dhtslib#101 · opened on Aug 31, 2021
Functional style Optional and Result return types
blachlylab/dhtslib#99 · opened on Aug 25, 2021
htslib unittests
blachlylab/dhtslib#97 · opened on Aug 25, 2021
1
rust-htslib read_pos
blachlylab/dhtslib#91 · opened on Aug 3, 2021
2
Documentation: HTML output and github pages/hosted
blachlylab/dhtslib#67 · opened on Apr 21, 2021
4
Areas for performance improvement
blachlylab/dhtslib#65 · opened on Apr 21, 2021
2
Separate unit tests and integration tests
blachlylab/dhtslib#60 · opened on Mar 8, 2021
2
Centralized (compiler) warnings
blachlylab/dhtslib#56 · opened on Dec 22, 2020
Windows compatibility
blachlylab/dhtslib#38 · opened on Feb 22, 2020
7
tagvalue null pointer
blachlylab/dhtslib#33 · opened on Nov 2, 2019
8
Documentation: source level
blachlylab/dhtslib#21 · opened on Mar 9, 2019
1
Expose pileup in dhtslib.sam.SAMFile
blachlylab/dhtslib#8 · opened on Jan 22, 2019
1

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Issues

Issues

GFF3Reader can't handle with comment lines in middle of file

VCFRecord.filter doesn't return correct set of filters

Rework reader/writers to use HtslibIterator and HtslibFile across dhtslib

Update bindings to htslib 1.15

bam_aux_update_int fails non-deterministically

Version check warning

Update bindings to htslib 1.14

Get valid coordinates from Interval

GFF3 coordinate offsets don't make sense

Convert integration unit tests to true unit tests

Rebranding (name change)

`Interval` (and `Coordinate`) should probably include contig name

Functional style `Optional` and `Result` return types

htslib unittests

rust-htslib `read_pos`

Documentation: HTML output and github pages/hosted

Areas for performance improvement

Separate unit tests and integration tests

Centralized (compiler) warnings

Windows compatibility

tagvalue null pointer

Documentation: source level

Expose pileup in dhtslib.sam.SAMFile