| The protein folding network F Rao, A Caflisch Journal of molecular biology 342 (1), 299-306, 2004 | 444 | 2004 |
| Wordom: a program for efficient analysis of molecular dynamics simulations M Seeber, M Cecchini, F Rao, G Settanni, A Caflisch Bioinformatics 23 (19), 2625-2627, 2007 | 317 | 2007 |
| Wordom: A user‐friendly program for the analysis of molecular structures, trajectories, and free energy surfaces M Seeber, A Felline, F Raimondi, S Muff, R Friedman, F Rao, A Caflisch, ... Journal of computational chemistry 32 (6), 1183-1194, 2011 | 283 | 2011 |
| Replica exchange molecular dynamics simulations of amyloid peptide aggregation M Cecchini, F Rao, M Seeber, A Caflisch The Journal of chemical physics 121, 10748, 2004 | 251 | 2004 |
| Local modularity measure for network clusterizations S Muff, F Rao, A Caflisch Physical Review E 72 (5), 056107, 2005 | 231 | 2005 |
| Complex network analysis of free-energy landscapes D Gfeller, P De Los Rios, A Caflisch, F Rao Proceedings of the National Academy of Sciences 104 (6), 1817, 2007 | 205 | 2007 |
| Replica exchange molecular dynamics simulations of reversible folding F Rao, A Caflisch The Journal of chemical physics 119, 4035, 2003 | 126 | 2003 |
| Networks in cell biology M Buchanan, G Caldarelli, P De Los Rios, F Rao, M Vendruscolo Cambridge University Press, 2010 | 99 | 2010 |
| The quest for self-consistency in hydrogen bond definitions D Prada-Gracia, R Shevchuk, F Rao The Journal of chemical physics 139 (8), 2013 | 93 | 2013 |
| Three-Dimensional Infrared Spectroscopy of Isotope-Substituted Liquid Water Reveals Heterogeneous Dynamics S Garrett-Roe, F Perakis, F Rao, P Hamm The Journal of Physical Chemistry B, 2011 | 89 | 2011 |
| Φ-Value analysis by molecular dynamics simulations of reversible folding G Settanni, F Rao, A Caflisch Proceedings of the National Academy of Sciences of the United States of …, 2005 | 86 | 2005 |
| Protein dynamics investigated by inherent structure analysis F Rao, M Karplus Proceedings of the National Academy of Sciences 107 (20), 9152, 2010 | 75 | 2010 |
| Quantum mechanics of excitation transport in photosynthetic complexes: a key issues review F Levi, S Mostarda, F Rao, F Mintert Reports on Progress in Physics 78 (8), 082001, 2015 | 71 | 2015 |
| On the rich-club effect in dense and weighted networks V Zlatic, G Bianconi, A Diaz-Guilera, D Garlaschelli, F Rao, G Caldarelli The European Physical Journal B-Condensed Matter and Complex Systems 67 (3 …, 2009 | 69 | 2009 |
| Taxonomy and clustering in collaborative systems: The case of the on-line encyclopedia Wikipedia A Capocci, F Rao, G Caldarelli EPL (Europhysics Letters) 81, 28006, 2008 | 59 | 2008 |
| Estimation of protein folding probability from equilibrium simulations F Rao, G Settanni, E Guarnera, A Caflisch The Journal of chemical physics 122, 184901, 2005 | 53 | 2005 |
| Structural Inhomogeneity of Water by Complex Network Analysis F Rao, S Garrett-Roe, P Hamm The Journal of Physical Chemistry B, 2010 | 50 | 2010 |
| Beyond the Binding Site: The Role of the β2–β3 Loop and Extra-Domain Structures in PDZ Domains S Mostarda, D Gfeller, F Rao PLoS Computational Biology 8 (3), e1002429, 2012 | 49 | 2012 |
| Uncovering the topology of configuration space networks D Gfeller, DM de Lachapelle, P De Los Rios, G Caldarelli, F Rao Physical Review E 76 (2), 026113, 2007 | 45 | 2007 |
| Topological dynamics in supramolecular rotors CA Palma, J Bjork, F Rao, D Kühne, F Klappenberger, JV Barth Nano letters 14 (8), 4461-4468, 2014 | 40 | 2014 |
Amedeo CaflischDepartment of Biochemistry, University of ZurichVerified email at bioc.uzh.ch
