| The center for expanded data annotation and retrieval MA Musen, CA Bean, KH Cheung, M Dumontier, KA Durante, O Gevaert, ... Journal of the American Medical Informatics Association 22 (6), 1148-1152, 2015 | 153 | 2015 |
| NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation M Martínez-Romero, C Jonquet, MJ O'Connor, J Graybeal, A Pazos, ... Journal of Biomedical Semantics 8 (21), 1-22, 2017 | 135 | 2017 |
| Artificial intelligence techniques for colorectal cancer drug metabolism: ontologies and complex networks M Martínez-Romero, JM Vázquez-Naya, J R. Rabunal, S Pita-Fernández, ... Current drug metabolism 11 (4), 347-368, 2010 | 94 | 2010 |
| The CEDAR workbench: an ontology-assisted environment for authoring metadata that describe scientific experiments RS Gonçalves, MJ O’Connor, M Martínez-Romero, AL Egyedi, D Willrett, ... International Semantic Web Conference, 103-110, 2017 | 69 | 2017 |
| Ontologies of drug discovery and design for neurology, cardiology and oncology J M. Vazquez-Naya, M Martinez-Romero, A B. Porto-Pazos, F Novoa, ... Current pharmaceutical design 16 (24), 2724-2736, 2010 | 60 | 2010 |
| Improving ontology alignment through genetic algorithms JMV Naya, MM Romero, JP Loureiro, CR Munteanu, AP Sierra Soft computing methods for practical environment solutions: Techniques and …, 2010 | 60 | 2010 |
| Modeling community standards for metadata as templates makes data FAIR MA Musen, MJ O’Connor, E Schultes, M Martínez-Romero, J Hardi, ... Scientific Data 9 (1), 696, 2022 | 59 | 2022 |
| The iOSC3 system: using ontologies and SWRL rules for intelligent supervision and care of patients with acute cardiac disorders M Martínez-Romero, JM Vázquez-Naya, J Pereira, M Pereira, A Pazos, ... Computational and Mathematical Methods in Medicine 2013 (Special Issue on …, 2013 | 39 | 2013 |
| Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases M Martínez-Romero, MJ O'Connor, AL Egyedi, D Willrett, J Hardi, ... Database 2019 (2019), 2019 | 38 | 2019 |
| BiOSS: A system for biomedical ontology selection M Martínez-Romero, JM Vázquez-Naya, J Pereira, A Pazos Computer methods and programs in biomedicine 114 (1), 125-140, 2014 | 32 | 2014 |
| An approach for the automatic recommendation of ontologies using collaborative knowledge M Martínez-Romero, J Vázquez-Naya, C Munteanu, J Pereira, A Pazos Knowledge-Based and Intelligent Information and Engineering Systems, 74-81, 2010 | 28* | 2010 |
| Fast and accurate metadata authoring using ontology-based recommendations M Martínez-Romero, MJ O’Connor, RD Shankar, M Panahiazar, D Willrett, ... AMIA Annual Symposium Proceedings 2017, 1272, 2018 | 24 | 2018 |
| Extracting diagnostic knowledge from MedLine Plus: a comparison between MetaMap and cTAKES Approaches A Rodríguez-González, R Costumero, M Martinez-Romero, MD Wilkinson, ... Current Bioinformatics 13 (6), 573-582, 2018 | 22 | 2018 |
| Diagnostic knowledge extraction from medlineplus: an application for infectious diseases A Rodríguez-González, M Martínez-Romero, R Costumero, MD Wilkinson, ... 9th International Conference on Practical Applications of Computational …, 2015 | 21 | 2015 |
| The CAIRR pipeline for submitting standards-compliant B and T cell receptor repertoire sequencing studies to the National Center for Biotechnology Information Repositories SAC Bukhari, MJ O’Connor, M Martínez-Romero, AL Egyedi, D Willrett, ... Frontiers in immunology 9, 1877, 2018 | 19 | 2018 |
| An open repository model for acquiring knowledge about scientific experiments MJ O’Connor, M Martínez-Romero, AL Egyedi, D Willrett, J Graybeal, ... European Knowledge Acquisition Workshop, 762-777, 2016 | 19 | 2016 |
| CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata SAC Bukhari, M Martínez-Romero, MJ O’Connor, AL Egyedi, D Willrett, ... BMC bioinformatics 19 (1), 268, 2018 | 18 | 2018 |
| Ontology alignment techniques MM Romero, JMV Naya, JP Loureiro, N Ezquerra Encyclopedia of Artificial Intelligence, 1290-1295, 2009 | 17 | 2009 |
| Unleashing the value of Common Data Elements through the CEDAR Workbench M O'Connor, D Warzel, M Martínez-Romero, J Hardi, D Willrett, A Efekhari, ... AMIA 2019 Annual Symposium, 2019 | 16 | 2019 |
| Metadata in the BioSample online repository are impaired by numerous anomalies RS Gonçalves, MJ O'Connor, M Martínez-Romero, J Graybeal, MA Musen 1st International Workshop SemSci 2017 (Enabling Open Semantic Science), co …, 2017 | 15 | 2017 |
Mark MusenStanford Medicine Professor of Biomedical Informatics Research, Stanford UniversityVerified email at stanford.edu
