| SQWRL: a query language for OWL MJ O’Connor, AK Das OWL: Experiences and Directions (OWLED), 6th International Workshop, 2009 | 498 | 2009 |
| Supporting rule system interoperability on the semantic web with SWRL M O’connor, H Knublauch, S Tu, B Grosof, M Dean, W Grosso, M Musen International semantic web conference, 974-986, 2005 | 425 | 2005 |
| Advances and prospects for the human BioMolecular atlas Program (HuBMAP) S Jain, L Pei, JM Spraggins, M Angelo, JP Carson, N Gehlenborg, F Ginty, ... Nature cell biology 25 (8), 1089-1100, 2023 | 153 | 2023 |
| The center for expanded data annotation and retrieval MA Musen, CA Bean, KH Cheung, M Dumontier, KA Durante, O Gevaert, ... Journal of the American Medical Informatics Association 22 (6), 1148-1152, 2015 | 152 | 2015 |
| Writing rules for the semantic web using SWRL and Jess M O’connor, H Knublauch, S Tu, M Musen Protégé With Rules WS, Madrid, 2005 | 143 | 2005 |
| Translating research into practice: organizational issues in implementing automated decision support for hypertension in three medical centers MK Goldstein, RW Coleman, SW Tu, RD Shankar, MJ O'Connor, ... Journal of the American Medical Informatics Association 11 (5), 368-376, 2004 | 136 | 2004 |
| NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation M Martínez-Romero, C Jonquet, MJ O’connor, J Graybeal, A Pazos, ... Journal of biomedical semantics 8 (1), 21, 2017 | 135 | 2017 |
| A method for representing and querying temporal information in OWL MJ O’Connor, AK Das International joint conference on biomedical engineering systems and …, 2010 | 135 | 2010 |
| Mapping master: a flexible approach for mapping spreadsheets to OWL MJ O’connor, C Halaschek-Wiener, MA Musen International Semantic Web Conference, 194-208, 2010 | 134 | 2010 |
| Implementing clinical practice guidelines while taking account of changing evidence: ATHENA DSS, an easily modifiable decision-support system for managing hypertension in … MK Goldstein, BB Hoffman, RW Coleman, MA Musen, SW Tu, A Advani, ... Proceedings of the AMIA Symposium, 300, 2000 | 131 | 2000 |
| Datamaster–a plug-in for importing schemas and data from relational databases into protege C Nyulas, M O’connor, S Tu 10th international Protégé conference, 15-18, 2007 | 102 | 2007 |
| Patient safety in guideline-based decision support for hypertension management: ATHENA DSS MK Goldstein, BB Hoffman, RW Coleman, SW Tu, RD Shankar, ... Journal of the American Medical Informatics Association 9 (Supplement_6 …, 2002 | 81 | 2002 |
| Ontology-centered syndromic surveillance for bioterrorism M Crubézy, M O'Connor, Z Pincus, MA Musen, DL Buckeridge IEEE Intelligent Systems 20 (5), 26-35, 2005 | 75 | 2005 |
| The Chronus II temporal database mediator MJ O'Connor, SW Tu, MA Musen Proceedings of the AMIA Symposium, 567, 2002 | 71 | 2002 |
| The CEDAR workbench: an ontology-assisted environment for authoring metadata that describe scientific experiments RS Gonçalves, MJ O’Connor, M Martínez-Romero, AL Egyedi, D Willrett, ... International Semantic Web Conference, 103-110, 2017 | 69 | 2017 |
| Automated tracking of quantitative assessments of tumor burden in clinical trials DL Rubin, D Willrett, MJ O'Connor, C Hage, C Kurtz, DA Moreira Translational oncology 7 (1), 23-35, 2014 | 68 | 2014 |
| Modeling community standards for metadata as templates makes data FAIR MA Musen, MJ O’Connor, E Schultes, M Martínez-Romero, J Hardi, ... Scientific Data 9 (1), 696, 2022 | 59 | 2022 |
| Understanding detection performance in public health surveillance: modeling aberrancy-detection algorithms DL Buckeridge, A Okhmatovskaia, S Tu, M O'Connor, C Nyulas, ... Journal of the American Medical Informatics Association 15 (6), 760-769, 2008 | 57 | 2008 |
| Developing a Web-based application using OWL and SWRL MJ O’Connor, R Shankar, C Nyulas, S Tu, A Das AAAI Spring Symposium, 2008 | 57 | 2008 |
| Knowledge-based bioterrorism surveillance DL Buckeridge, J Graham, MJ O'Connor, MK Choy, SW Tu, MA Musen Proceedings of the AMIA Symposium, 76, 2002 | 56 | 2002 |
Mark MusenStanford Medicine Professor of Biomedical Informatics Research, Stanford UniversityVerified email at stanford.edu
