| Extracellular vesicles from human‐induced pluripotent stem cell‐derived neural stem cells alleviate proinflammatory cascades within disease‐associated microglia in Alzheimer's … LN Madhu, M Kodali, R Upadhya, S Rao, Y Somayaji, S Attaluri, B Shuai, ... Journal of Extracellular Vesicles 13 (11), e12519, 2024 | 33 | 2024 |
| Single-nucleus transcriptomics of epicardial adipose tissue from female pigs reveals effects of exercise training on resident innate and adaptive immune cells I Ahmad, S Gupta, P Faulkner, D Mullens, M Thomas, SP Sytha, I Ivanov, ... Cell Communication and Signaling 22 (1), 243, 2024 | 9* | 2024 |
| Exploring cell-to-cell variability and functional insights through differentially variable gene analysis V Gatlin, S Gupta, S Romero, RS Chapkin, JJ Cai npj Systems Biology and Applications 11 (1), 29, 2025 | 7 | 2025 |
| Intranasally Administered EVs from hiPSC-derived NSCs Alter the Transcriptomic Profile of Activated Microglia and Conserve Brain Function in an Alzheimer’s Model LN Madhu, M Kodali, R Upadhya, S Rao, B Shuai, Y Somayaji, S Attaluri, ... BioRxiv, 2024.01. 18.576313, 2024 | 5 | 2024 |
| Quantum annealing for enhanced feature selection in single-cell RNA sequencing data analysis S Romero, S Gupta, V Gatlin, RS Chapkin, JJ Cai Quantum Machine Intelligence 7 (2), 114, 2025 | 2 | 2025 |
| Gene function revealed at the moment of stochastic gene silencing S Gupta, JJ Cai Communications Biology 8 (1), 88, 2025 | 2 | 2025 |
| STAT1-Mediated Regulation of IL-17A/CEBPB/NF-κB Axis in HIV-1 Infected Human Cerebral Organoids Reveals Therapeutic Targets for Neuroprotection K Chennakesavan, M Samikkannu, S Gupta, O Israel Tayo, A Acharya, ... bioRxiv, 2025.12. 30.697044, 2025 | | 2025 |
| Exercise decreases the number and modifies the transcriptome of M1 macrophages and CD8+ T cells in nonoccluded epicardial adipose tissue of female pigs I Ahmad, S Gupta, M Thomas, JJ Cai, CL Heaps, AE Newell-Fugate American Journal of Physiology-Cell Physiology 329 (6), C1689-C1705, 2025 | | 2025 |
| CONSTRUCTING GENE REGULATORY NETWORK USING CHATTERJEE'S RANK CORRELATION WITH SINGLE-CELL TRANSCRIPTOMIC DATA S Gupta, A Chaudhuri, V Raghuraman, Y Ni, JJ Cai bioRxiv, 2025 | | 2025 |
| Din Oversees Mesenchymal Stem Cell Homeostasis in Mouse Incisors X Wang, C Dong, B Lamichhane, S Thapa, Y Zhang, S Gupta, JJ Cai Research Square, rs. 3. rs-6568233, 2025 | | 2025 |
| Expression of Prooncogenic Nuclear Receptor 4A (NR4A)-Regulated Genes β1-Integrin and G9a Inhibited by Dual NR4A1/2 Ligands L Zhang, V Gatlin, S Gupta, ML Salinas, S Romero, JJ Cai, RS Chapkin, ... International Journal of Molecular Sciences 26 (8), 3909, 2025 | | 2025 |
| Role of RSPO3 in Estrogen-mediated Sex Differences in Body Fat Distribution: A Single-cell Data-driven Study Q Xu, Y Yang, S Gupta, BJ Chen, G Li, M Chamberlain, JJ Cai bioRxiv, 2025.01. 03.631121, 2025 | | 2025 |
| Mapping Gene Impact on Single-cell Transcriptomic Networks via Perturbation Response Scanning S Gupta, S Romero, JJ Cai bioRxiv, 2025.12. 15.694358, 2025 | | 2025 |
| Quantum Annealing Empowers scRNA-seq Feature Selection in Drug Resistance Insights S Romero, S Gupta, V Gatlin, RS Chapkin, JJ Cai | | |
James J. CaiProfessor, Texas A&M UniversityVerified email at tamu.edu
