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Huy Tran
Huy Tran
Tampere University (TAU)
Verified email at tuni.fi
Title
Cited by
Cited by
Year
Precision of Readout at the hunchback Gene: Analyzing Short Transcription Time Traces in Living Fly Embryos
J Desponds, H Tran, T Ferraro, T Lucas, C Perez Romero, A Guillou, ...
PLoS computational biology 12 (12), e1005256, 2016
572016
3 minutes to precisely measure morphogen concentration
T Lucas, H Tran, CAP Romero, A Guillou, C Fradin, M Coppey, ...
PLOS Genetics 14 (10), e1007676, 2018
442018
Temperature-Dependent model of Multi-step transcription initiation in Escherichia coli based on live Single-Cell measurements
SMD Oliveira, A Häkkinen, J Lloyd-Price, H Tran, V Kandavalli, ...
PLoS computational biology 12 (10), e1005174, 2016
422016
Precision in a rush: Trade-offs between reproducibility and steepness of the hunchback expression pattern
H Tran, J Desponds, CA Perez Romero, M Coppey, C Fradin, N Dostatni, ...
PLoS computational biology 14 (10), e1006513, 2018
402018
Increased cytoplasm viscosity hampers aggregate polar segregation in Escherichia coli
SMD Oliveira, R Neeli‐Venkata, NSM Goncalves, JA Santinha, L Martins, ...
Molecular microbiology 99 (4), 686-699, 2016
402016
Effects of σ factor competition are promoter initiation kinetics dependent
VK Kandavalli, H Tran, AS Ribeiro
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1859 (10 …, 2016
362016
Kinetics of the cellular intake of a gene expression inducer at high concentrations
H Tran, SMD Oliveira, N Goncalves, AS Ribeiro
Molecular Biosystems 11 (9), 2579-2587, 2015
252015
Dynamics of small genetic circuits subject to stochastic partitioning in cell division
J Lloyd-Price, H Tran, AS Ribeiro
Journal of Theoretical Biology 356, 11-19, 2014
252014
Synthetic reconstruction of the hunchback promoter specifies the role of Bicoid, Zelda and Hunchback in the dynamics of its transcription
G Fernandes, H Tran, M Andrieu, Y Diaw, CP Romero, C Fradin, ...
Elife 11, e74509, 2022
242022
Effects of rate-limiting steps in transcription initiation on genetic filter motifs
A Häkkinen, H Tran, O Yli-Harja, AS Ribeiro
Plos one 8 (8), e70439, 2013
122013
Effects of temperature on the dynamics of the LacI-TetR-CI repressilator
JG Chandraseelan, SMD Oliveira, A Häkkinen, H Tran, I Potapov, A Sala, ...
Molecular BioSystems 9 (12), 3117-3123, 2013
122013
Light-induced nanoscale deformation in azobenzene thin film triggers rapid intracellular Ca2+ increase via mechanosensitive cation channels
HM Peussa, C Fedele, H Tran, J Fadjukov, E Mäntylä, A Priimägi, ...
Advanced Science, https://onlinelibrary.wiley.com/doi/full, 2023
92023
Constraints and limitations on the transcriptional response downstream of the Bicoid morphogen gradient
H Tran, AM Walczak, N Dostatni
Current Topics in Developmental Biology - Gradients and Tissue Patterning …, 2020
92020
Live imaging of mRNA transcription in Drosophila Embryos
CA Perez-Romero, H Tran, M Coppey, AM Walczak, C Fradin, N Dostatni
Morphogen Gradients: Methods and Protocols, 165-182, 2018
82018
Effects of multimerization on the temporal variability of protein complex abundance
A Häkkinen, H Tran, O Yli-Harja, B Ingalls, AS Ribeiro
BMC Systems Biology 7 (Suppl 1), S3, 2013
72013
LiveFly: a toolbox for the analysis of transcription dynamics in live Drosophila embryos
H Tran, CA Perez-Romero, T Ferraro, C Fradin, N Dostatni, M Coppey, ...
Morphogen Gradients: Methods and Protocols, 183-195, 2018
52018
EyeHex toolbox for complete segmentation of ommatidia in fruit fly eyes
H Tran, N Dostatni, A Ramaekers
Biology Open 14 (6), bio061962, 2025
22025
Synthetic deconstruction of hunchback regulation by Bicoid
G Fernandes, H Tran, M Andrieu, Y Diaw, C Perez Romero, C Fradin, ...
BioRXiv, 2021
2021
Integrating space and time in patterning of gene expression in embryogenesis via a synthetic approach
H Tran
Annual Physical Society March (meeting online), 2021
2021
Precision of readout at the hunchback gene
J Desponds, H Tran, T Ferraro, T Lucas, C Perez Romero, A Guillou, ...
bioRxiv, 063784, 2016
2016
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Articles 1–20