| Automated Reconstruction of Whole-Genome Phylogenies from Short-Sequence Reads F Bertels, OK Silander, M Pachkov, PB Rainey, E van Nimwegen Molecular biology and evolution 31 (5), 1077-1088, 2014 | 523 | 2014 |
| Genomic Analysis of the Kiwifruit Pathogen Pseudomonas syringae pv. actinidiae Provides Insight into the Origins of an Emergent Plant Disease HC McCann, EHA Rikkerink, F Bertels, M Fiers, A Lu, J Rees-George, ... PLoS pathogens 9 (7), e1003503, 2013 | 318 | 2013 |
| Global identification of yeast chromosome interactions using Genome conformation capture CDM Rodley, F Bertels, B Jones, JM O'Sullivan Fungal Genetics and Biology 46 (11), 879-886, 2009 | 153 | 2009 |
| The perils of plenty: what are we going to do with all these genes? A Rodrigo, F Bertels, J Heled, R Noder, H Shearman, P Tsai Philosophical Transactions of the Royal Society of London B: Biological …, 2008 | 103 | 2008 |
| Adaptive Divergence in Experimental Populations of Pseudomonas fluorescens. V. Insight into the Niche Specialist Fuzzy Spreader Compels Revision of the Model Pseudomonas Radiation GC Ferguson, F Bertels, PB Rainey Genetics 195 (4), 1319-1335, 2013 | 68 | 2013 |
| Within-genome evolution of REPINs: a new family of miniature mobile DNA in bacteria F Bertels, PB Rainey PLoS genetics 7 (6), e1002132, 2011 | 62 | 2011 |
| Bistability in a Metabolic Network Underpins the De Novo Evolution of Colony Switching in Pseudomonas fluorescens J Gallie, E Libby, F Bertels, P Remigi, CB Jendresen, GC Ferguson, ... PLoS biology 13 (3), e1002109, 2015 | 61 | 2015 |
| Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T-Cell Decline, and Per-Parasite Pathogenicity F Bertels, A Marzel, G Leventhal, V Mitov, J Fellay, HF Günthard, J Böni, ... Molecular biology and evolution 35 (1), 27-37, 2018 | 53 | 2018 |
| Parallel evolution of HIV-1 in a long-term experiment F Bertels, C Leemann, KJ Metzner, RR Regoes Molecular biology and evolution 36 (11), 2400-2414, 2019 | 32 | 2019 |
| Stepwise Evolution of E. coli C and ΦX174 Reveals Unexpected Lipopolysaccharide (LPS) Diversity J Romeyer Dherbey, L Parab, J Gallie, F Bertels Molecular Biology and Evolution 40 (7), msad154, 2023 | 25 | 2023 |
| Transposable elements promote the evolution of genome streamlining B van Dijk, F Bertels, L Stolk, N Takeuchi, PB Rainey Philosophical Transactions of the Royal Society B 377 (1842), 20200477, 2022 | 25* | 2022 |
| Curiosities of REPINs and RAYTs F Bertels, PB Rainey Mobile Genetic Elements 1 (4), 262-301, 2011 | 24 | 2011 |
| Repeated phenotypic evolution by different genetic routes in Pseudomonas fluorescens SBW25. J Gallie, F Bertels, P Remigi, GC Ferguson, S Nestmann, PB Rainey Molecular biology and evolution, 2019 | 22 | 2019 |
| Discovering complete quasispecies in bacterial genomes F Bertels, CS Gokhale, A Traulsen Genetics 206 (4), 2149-2157, 2017 | 22 | 2017 |
| Estimating the mutational fitness effects distribution during early HIV infection E Bons, F Bertels, RR Regoes Virus evolution 4 (2), vey029, 2018 | 20 | 2018 |
| Identification and characterization of domesticated bacterial transposases F Bertels, J Gallie, PB Rainey Genome Biology and Evolution 9 (8), 2110-2121, 2017 | 18 | 2017 |
| Recombination of Virulence Genes in Divergent Acidovorax avenae Strains That Infect a Common Host Q Zeng, J Wang, F Bertels, PR Giordano, MI Chilvers, RB Huntley, ... Molecular Plant-Microbe Interactions 30 (10), 813-828, 2017 | 16 | 2017 |
| Convergent evolution as an indicator for selection during acute HIV-1 infection F Bertels, KJ Metzner, RR Regoes PCI Evolutionary Biology, 2018 | 15 | 2018 |
| Rapid dissemination of host metabolism–manipulating genes via integrative and conjugative elements E Colombi, F Bertels, G Doulcier, E McConnell, T Pichugina, KH Sohn, ... Proceedings of the National Academy of Sciences 121 (11), e2309263121, 2024 | 13 | 2024 |
| How sequence populations persist inside bacterial genomes HJ Park, CS Gokhale, F Bertels Genetics 217 (4), iyab027, 2021 | 13 | 2021 |
Paul B RaineyMax-Planck Institute for Evolutionary Biology, Plön, Germany & ESPCI, Paris, FranceVerified email at evolbio.mpg.de
