| On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria RM Soo, J Hemp, DH Parks, WW Fischer, P Hugenholtz Science 355 (6332), 1436-1440, 2017 | 441 | 2017 |
| An expanded genomic representation of the phylum Cyanobacteria RM Soo, CT Skennerton, Y Sekiguchi, M Imelfort, SJ Paech, PG Dennis, ... Genome biology and evolution 6 (5), 1031-1045, 2014 | 333 | 2014 |
| Prokaryotic taxonomy and nomenclature in the age of big sequence data P Hugenholtz, M Chuvochina, A Oren, DH Parks, RM Soo The ISME Journal 15 (7), 1879-1892, 2021 | 213 | 2021 |
| Elevated seawater temperature causes a microbial shift on crustose coralline algae with implications for the recruitment of coral larvae NS Webster, R Soo, R Cobb, AP Negri The ISME journal 5 (4), 759-770, 2011 | 210 | 2011 |
| Microbial community composition in soils of Northern Victoria Land, Antarctica TD Niederberger, IR McDonald, AL Hacker, RM Soo, JE Barrett, DH Wall, ... Environmental microbiology 10 (7), 1713-1724, 2008 | 200 | 2008 |
| Coral reef invertebrate microbiomes correlate with the presence of photosymbionts DG Bourne, PG Dennis, S Uthicke, RM Soo, GW Tyson, N Webster The ISME journal 7 (7), 1452-1458, 2013 | 195 | 2013 |
| Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus RM Soo, BJ Woodcroft, DH Parks, GW Tyson, P Hugenholtz PeerJ 3, e968, 2015 | 124 | 2015 |
| Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica RM Soo, SA Wood, JJ Grzymski, IR McDonald, SC Cary Environmental Microbiology 11 (3), 715-728, 2009 | 110 | 2009 |
| Biochar for intensification of plant-related industries to meet productivity, sustainability and economic goals: A review J Kochanek, RM Soo, C Martinez, A Dakuidreketi, AM Mudge Resources, Conservation and Recycling 179, 106109, 2022 | 95 | 2022 |
| The larval sponge holobiont exhibits high thermal tolerance NS Webster, ES Botté, RM Soo, S Whalan Environmental Microbiology Reports 3 (6), 756-762, 2011 | 92 | 2011 |
| Same, same but different: symbiotic bacterial associations in GBR sponges NS Webster, HM Luter, RM Soo, ES Botté, RL Simister, D Abdo, S Whalan Frontiers in microbiology 3, 444, 2013 | 87 | 2013 |
| Evolution of photosynthesis and aerobic respiration in the cyanobacteria RM Soo, J Hemp, P Hugenholtz Free Radical Biology and Medicine 140, 200-205, 2019 | 86 | 2019 |
| Near‐future ocean acidification causes differences in microbial associations within diverse coral reef taxa NS Webster, AP Negri, F Flores, C Humphrey, R Soo, ES Botté, N Vogel, ... Environmental Microbiology Reports 5 (2), 243-251, 2013 | 83 | 2013 |
| Coral-bacterial communities before and after a coral mass spawning event on Ningaloo Reef J Ceh, JB Raina, RM Soo, M van Keulen, DG Bourne PLoS One 7 (5), e36920, 2012 | 83 | 2012 |
| Faecal inoculations alter the gastrointestinal microbiome and allow dietary expansion in a wild specialist herbivore, the koala MDJ Blyton, RM Soo, D Whisson, KJ Marsh, J Pascoe, M Le Pla, W Foley, ... Animal Microbiome 1 (1), 6, 2019 | 82 | 2019 |
| Bacterial Community Dynamics in the Marine Sponge Rhopaloeides odorabile Under In Situ and Ex Situ Cultivation NS Webster, RE Cobb, R Soo, SL Anthony, CN Battershill, S Whalan, ... Marine Biotechnology 13 (2), 296-304, 2011 | 73 | 2011 |
| Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion ME Shiffman, RM Soo, PG Dennis, M Morrison, GW Tyson, P Hugenholtz PeerJ 5, e4075, 2017 | 60 | 2017 |
| A geological timescale for bacterial evolution and oxygen adaptation AA Davín, BJ Woodcroft, RM Soo, B Morel, R Murali, D Schrempf, ... Science 388 (6742), eadp1853, 2025 | 33 | 2025 |
| Maternal inheritance of the koala gut microbiome and its compositional and functional maturation during juvenile development MDJ Blyton, RM Soo, P Hugenholtz, BD Moore Environmental Microbiology 24 (1), 475-493, 2022 | 33 | 2022 |
| Phylogenetic reconciliation: making the most of genomes to understand microbial ecology and evolution TA Williams, AA Davin, LL Szánthó, A Stamatakis, NA Wahl, BJ Woodcroft, ... The ISME Journal 18 (1), wrae129, 2024 | 20 | 2024 |
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
