| A receptor-like protein mediates plant immune responses to herbivore-associated molecular patterns AD Steinbrenner, M Muñoz-Amatriaín, AF Chaparro, JM Aguilar-Venegas, ... Proceedings of the National Academy of Sciences 117 (49), 31510-31518, 2020 | 160 | 2020 |
| Benchmarking refined and unrefined AlphaFold2 structures for hit discovery Y Zhang, M Vass, D Shi, E Abualrous, JM Chambers, N Chopra, C Higgs, ... Journal of Chemical Information and Modeling 63 (6), 1656-1667, 2023 | 113 | 2023 |
| Systems biology analysis reveals eight SLC22 transporter subgroups, including OATs, OCTs, and OCTNs DC Engelhart, JC Granados, D Shi, MH Saier Jr, ME Baker, R Abagyan, ... International journal of molecular sciences 21 (5), 1791, 2020 | 64 | 2020 |
| Unique metabolite preferences of the drug transporters OAT1 and OAT3 analyzed by machine learning AK Nigam, JG Li, K Lall, D Shi, KT Bush, V Bhatnagar, R Abagyan, ... Journal of Biological Chemistry 295 (7), 1829-1842, 2020 | 60 | 2020 |
| Phenotypic, chemical and functional characterization of cyclic nucleotide phosphodiesterase 4 (PDE4) as a potential anthelmintic drug target T Long, L Rojo-Arreola, D Shi, N El-Sakkary, K Jarnagin, F Rock, ... PLoS neglected tropical diseases 11 (7), e0005680, 2017 | 53 | 2017 |
| Facile synthesis of highly graphitized porous carbon monoliths with a balance on crystallization and pore-structure S Tao, Y Wang, D Shi, Y An, J Qiu, Y Zhao, Y Cao, X Zhang Journal of Materials Chemistry A 2 (32), 12785-12791, 2014 | 49 | 2014 |
| Differential activities of maize plant elicitor peptides as mediators of immune signaling and herbivore resistance E Poretsky, K Dressano, P Weckwerth, M Ruiz, SN Char, D Shi, ... The Plant Journal 104 (6), 1582-1602, 2020 | 44 | 2020 |
| A quinoline-functionalized amphiphilic fluorogenic probe for specific detection of trivalent cations S Tao, Y Wei, C Wang, Z Wang, P Fan, D Shi, B Ding, J Qiu RSC Advances 4 (87), 46955-46961, 2014 | 42 | 2014 |
| Flipping states: a few key residues decide the winning conformation of the only universally conserved transcription factor D Shi, D Svetlov, R Abagyan, I Artsimovitch Nucleic acids research 45 (15), 8835-8843, 2017 | 35 | 2017 |
| Probing the mechanism of hepatotoxicity of hexabromocyclododecanes through toxicological network analysis W Dai, T Tang, Z Dai, D Shi, L Mo, Y Zhang Environmental Science & Technology 54 (23), 15235-15245, 2020 | 33 | 2020 |
| Molecular properties of drugs handled by kidney OATs and liver OATPs revealed by chemoinformatics and machine learning: implications for kidney and liver disease AK Nigam, AA Ojha, JG Li, D Shi, V Bhatnagar, KB Nigam, R Abagyan, ... Pharmaceutics 13 (10), 1720, 2021 | 28 | 2021 |
| ARN25068, a versatile starting point towards triple GSK-3β/FYN/DYRK1A inhibitors to tackle tau-related neurological disorders S Demuro, C Sauvey, SK Tripathi, RMC Di Martino, D Shi, JA Ortega, ... European journal of medicinal chemistry 229, 114054, 2022 | 25 | 2022 |
| Synthesis, optimization, antifungal activity, selectivity, and CYP51 binding of new 2-Aryl-3-azolyl-1-indolyl-propan-2-ols N Lebouvier, F Pagniez, YM Na, D Shi, P Pinson, M Marchivie, J Guillon, ... Pharmaceuticals 13 (8), 186, 2020 | 22 | 2020 |
| Biomimetic membrane-structured nanovesicles carrying a supramolecular enzyme to cure lung cancer J Gu, Y Huang, Z Yan, D He, Y Zhang, J Xu, Y Li, X Xie, J Xie, D Shi, ... ACS applied materials & interfaces 12 (28), 31112-31123, 2020 | 22 | 2020 |
| A general, green chemistry approach for immobilization of inorganic catalysts in monolithic porous flow-reactors Y Wang, D Shi, S Tao, W Song, H Wang, X Wang, G Li, J Qiu, M Ji ACS Sustainable Chemistry & Engineering 4 (3), 1602-1610, 2016 | 22 | 2016 |
| Mapping the gene network landscape of Alzheimer’s disease through integrating genomics and transcriptomics SB Rosenthal, H Wang, D Shi, C Liu, R Abagyan, LK McEvoy, CH Chen PLoS computational biology 18 (2), e1009903, 2022 | 21 | 2022 |
| Biomimetic polysaccharide-cloaked lipidic nanovesicles/microassemblies for improving the enzymatic activity and prolonging the action time for hyperuricemia treatment L Yang, Y Zhang, J Xie, C Zhong, D He, T Wang, K Li, Y Li, D Shi, ... Nanoscale 12 (28), 15222-15235, 2020 | 21 | 2020 |
| Extended multitarget pharmacology of anticancer drugs D Shi, F Khan, R Abagyan Journal of chemical information and modeling 59 (6), 3006-3017, 2019 | 19 | 2019 |
| In silico discovery of small molecules that inhibit RfaH recruitment to RNA polymerase D Svetlov, D Shi, J Twentyman, Y Nedialkov, DA Rosen, R Abagyan, ... Molecular microbiology 110 (1), 128-142, 2018 | 19 | 2018 |
| Cytomembrane-mimicking nanocarriers with a scaffold consisting of a CD44-targeted endogenous component for effective asparaginase supramolecule delivery Y Huang, J Gu, Z Yan, X Hu, D He, Y Zhang, Y Li, C Zhong, J Yang, D Shi, ... Nanoscale 12 (22), 12083-12097, 2020 | 17 | 2020 |
Ruben AbagyanUniversity of California, San DiegoVerified email at health.ucsd.edu
