| Integrative analysis of 111 reference human epigenomes Roadmap Epigenomics Consortium Integrative analysis coordination Kundaje ... Nature 518 (7539), 317-330, 2015 | 7052* | 2015 |
| Human DNA methylomes at base resolution show widespread epigenomic differences R Lister, M Pelizzola, RH Dowen, RD Hawkins, G Hon, J Tonti-Filippini, ... nature 462 (7271), 315-322, 2009 | 5726 | 2009 |
| Highly integrated single-base resolution maps of the epigenome in Arabidopsis R Lister, RC O'Malley, J Tonti-Filippini, BD Gregory, CC Berry, AH Millar, ... Cell 133 (3), 523-536, 2008 | 2964 | 2008 |
| Global epigenomic reconfiguration during mammalian brain development R Lister, EA Mukamel, JR Nery, M Urich, CA Puddifoot, ND Johnson, ... Science 341 (6146), 1237905, 2013 | 2141 | 2013 |
| Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ... Nature 471 (7336), 68-73, 2011 | 1904 | 2011 |
| Widespread dynamic DNA methylation in response to biotic stress RH Dowen, M Pelizzola, RJ Schmitz, R Lister, JM Dowen, JR Nery, ... Proceedings of the National Academy of Sciences 109 (32), E2183-E2191, 2012 | 1177 | 2012 |
| Genome evolution in the allotetraploid frog Xenopus laevis AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda, S Takahashi, ... Nature 538 (7625), 336-343, 2016 | 1098 | 2016 |
| Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells WA Pastor, UJ Pape, Y Huang, HR Henderson, R Lister, M Ko, ... Nature 473 (7347), 394-397, 2011 | 1032 | 2011 |
| Distinct epigenomic landscapes of pluripotent and lineage-committed human cells RD Hawkins, GC Hon, LK Lee, QM Ngo, R Lister, M Pelizzola, LE Edsall, ... Cell stem cell 6 (5), 479-491, 2010 | 1025 | 2010 |
| A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ... Nature neuroscience 22 (12), 2087-2097, 2019 | 969 | 2019 |
| Epigenomic analysis of multilineage differentiation of human embryonic stem cells W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ... Cell 153 (5), 1134-1148, 2013 | 867 | 2013 |
| Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ... Nature biotechnology 28 (10), 1097-1105, 2010 | 813 | 2010 |
| Epigenomic signatures of neuronal diversity in the mammalian brain A Mo, EA Mukamel, FP Davis, C Luo, GL Henry, S Picard, MA Urich, ... Neuron 86 (6), 1369-1384, 2015 | 811 | 2015 |
| Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer GC Hon, RD Hawkins, OL Caballero, C Lo, R Lister, M Pelizzola, ... Genome research 22 (2), 246-258, 2012 | 648 | 2012 |
| Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows E Denisenko, BB Guo, M Jones, R Hou, L De Kock, T Lassmann, D Poppe, ... Genome biology 21 (1), 130, 2020 | 638 | 2020 |
| Finding the fifth base: genome-wide sequencing of cytosine methylation R Lister, JR Ecker Genome research 19 (6), 959-966, 2009 | 486 | 2009 |
| A link between RNA metabolism and silencing affecting Arabidopsis development BD Gregory, RC O'Malley, R Lister, MA Urich, J Tonti-Filippini, H Chen, ... Developmental cell 14 (6), 854-866, 2008 | 472 | 2008 |
| Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana R Clifton, R Lister, KL Parker, PG Sappl, D Elhafez, AH Millar, DA Day, ... Plant molecular biology 58 (2), 193-212, 2005 | 415 | 2005 |
| Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements D Secco, C Wang, H Shou, MD Schultz, S Chiarenza, L Nussaume, ... elife 4, e09343, 2015 | 404 | 2015 |
| Modelling human blastocysts by reprogramming fibroblasts into iBlastoids X Liu, JP Tan, J Schröder, A Aberkane, JF Ouyang, M Mohenska, SM Lim, ... Nature 591 (7851), 627-632, 2021 | 398 | 2021 |
Joseph R. EckerHoward Hughes Medical Institute and The Salk Institute for Biological StudiesVerified email at Salk.edu
