| Reagent and laboratory contamination can critically impact sequence-based microbiome analyses SJ Salter, MJ Cox, EM Turek, ST Calus, WO Cookson, MF Moffatt, ... BMC biology 12 (1), 87, 2014 | 3658 | 2014 |
| Shotgun metagenomics, from sampling to analysis C Quince, AW Walker, JT Simpson, NJ Loman, N Segata Nature Biotechnology 35 (12), 833–844, 2017 | 2397 | 2017 |
| Dominant and diet-responsive groups of bacteria within the human colonic microbiota AW Walker, J Ince, SH Duncan, LM Webster, G Holtrop, X Ze, D Brown, ... The ISME journal 5 (2), 220-230, 2011 | 2105 | 2011 |
| Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota B Stecher, R Robbiani, AW Walker, AM Westendorf, M Barthel, M Kremer, ... PLoS biology 5 (10), e244, 2007 | 1299 | 2007 |
| pH and peptide supply can radically alter bacterial populations and short-chain fatty acid ratios within microbial communities from the human colon AW Walker, SH Duncan, EC McWilliam Leitch, MW Child, HJ Flint Applied and environmental microbiology 71 (7), 3692-3700, 2005 | 933 | 2005 |
| High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in … AW Walker, JD Sanderson, C Churcher, GC Parkes, BN Hudspith, ... BMC microbiology 11 (1), 7, 2011 | 920 | 2011 |
| Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions CJ Adler, K Dobney, LS Weyrich, J Kaidonis, AW Walker, W Haak, ... Nature genetics 45 (4), 450-455, 2013 | 850 | 2013 |
| Intestinal colonization resistance TD Lawley, AW Walker Immunology 138 (1), 1-11, 2013 | 840 | 2013 |
| Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice TD Lawley, S Clare, AW Walker, MD Stares, TR Connor, C Raisen, ... PLoS pathogens 8 (10), e1002995, 2012 | 698 | 2012 |
| Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen R Stewart, MD Auffret, A Warr, AH Wiser, MO Press, KW Langford, ... Nature communications 9, 870, 2018 | 595 | 2018 |
| Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae B Stecher, R Denzler, L Maier, F Bernet, MJ Sanders, DJ Pickard, ... Proceedings of the National Academy of Sciences 109 (4), 1269-1274, 2012 | 595 | 2012 |
| Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery RD Stewart, MD Auffret, A Warr, AW Walker, R Roehe, M Watson Nature biotechnology 37 (8), 953-961, 2019 | 583 | 2019 |
| The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation MM Zaiss, A Rapin, L Lebon, LK Dubey, I Mosconi, K Sarter, A Piersigilli, ... Immunity 43, 998-1010, 2015 | 506 | 2015 |
| Modulation of the human gut microbiota by dietary fibres occurs at the species level WSF Chung, AW Walker, P Louis, J Parkhill, J Vermeiren, D Bosscher, ... BMC biology 14 (1), 3 (doi: 10.1186/s12915-015-0224-3), 2016 | 472 | 2016 |
| Antibiotic Treatment of Clostridium difficile Carrier Mice Triggers a Supershedder State, Spore-Mediated Transmission, and Severe Disease in … TD Lawley, S Clare, AW Walker, D Goulding, RA Stabler, N Croucher, ... Infection and immunity 77 (9), 3661-3669, 2009 | 467 | 2009 |
| The impact of the Fungus-Host-Microbiota interplay upon Candida albicans infections: current knowledge and new perspectives C d'Enfert, AK Kaune, LR Alaban, S Chakraborty, N Cole, M Delavy, ... FEMS Microbiology Reviews 45 (3), fuaa060, 2021 | 434 | 2021 |
| The transcription factor T-bet regulates intestinal inflammation mediated by interleukin-7 receptor+ innate lymphoid cells N Powell, AW Walker, E Stolarczyk, JB Canavan, MR Gökmen, E Marks, ... Immunity 37 (4), 674-684, 2012 | 387 | 2012 |
| The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing NA Kennedy, AW Walker, SH Berry, SH Duncan, FM Farquarson, P Louis, ... PloS one 9 (2), e88982, 2014 | 386 | 2014 |
| Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies KM Kennedy, MC de Goffau, ME Perez-Muñoz, MC Arrieta, F Bäckhed, ... Nature 613 (7945), 639-649, 2023 | 367 | 2023 |
| Selective colonization of insoluble substrates by human faecal bacteria ECMW Leitch, AW Walker, SH Duncan, G Holtrop, HJ Flint Environmental microbiology 9 (3), 667-679, 2007 | 343 | 2007 |
Julian ParkhillUniversity of CambridgeVerified email at cam.ac.uk
