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Benjamin P. Brown
Benjamin P. Brown
Verified email at vanderbilt.edu
Title
Cited by
Cited by
Year
Modulation of the proteoglycan receptor PTPσ promotes recovery after spinal cord injury
BT Lang, JM Cregg, MA DePaul, AP Tran, K Xu, SM Dyck, KM Madalena, ...
Nature 518 (7539), 404-408, 2015
5252015
On-target resistance to the mutant-selective EGFR inhibitor osimertinib can develop in an allele-specific manner dependent on the original EGFR-activating mutation
BP Brown, YK Zhang, D Westover, Y Yan, H Qiao, V Huang, Z Du, ...
Clinical Cancer Research 25 (11), 3341-3351, 2019
1112019
Co-occurring gain-of-function mutations in HER2 and HER3 modulate HER2/HER3 activation, oncogenesis, and HER2 inhibitor sensitivity
AB Hanker, BP Brown, J Meiler, A Marin, HS Jayanthan, D Ye, CC Lin, ...
Cancer cell 39 (8), 1099-1114. e8, 2021
1012021
Structure–function analysis of oncogenic EGFR Kinase Domain Duplication reveals insights into activation and a potential approach for therapeutic targeting
Z Du, BP Brown, S Kim, D Ferguson, DC Pavlick, G Jayakumaran, ...
Nature Communications 12 (1), 1382, 2021
832021
General purpose structure-based drug discovery neural network score functions with human-interpretable pharmacophore maps
BP Brown, J Mendenhall, AR Geanes, J Meiler
Journal of chemical information and modeling 61 (2), 603-620, 2021
432021
BCL:: Conf: improved open-source knowledge-based conformation sampling using the crystallography open database
J Mendenhall, BP Brown, S Kothiwale, J Meiler
Journal of chemical information and modeling 61 (1), 189-201, 2020
432020
Time-resolved live-cell spectroscopy reveals EphA2 multimeric assembly
X Shi, R Lingerak, CJ Herting, Y Ge, S Kim, P Toth, W Wang, BP Brown, ...
Science 382 (6674), 1042-1050, 2023
392023
In vivo and in vitro ketamine exposure exhibits a dose-dependent induction of activity-dependent neuroprotective protein in rat neurons
BP Brown, SC Kang, K Gawelek, RA Zacharias, SR Anderson, CP Turner, ...
Neuroscience 290, 31-40, 2015
372015
Introduction to the BioChemical Library (BCL): An application-based open-source toolkit for integrated cheminformatics and machine learning in computer-aided drug discovery
BP Brown, O Vu, AR Geanes, S Kothiwale, M Butkiewicz, EW Lowe Jr, ...
Frontiers in pharmacology 13, 833099, 2022
332022
Approximating projections of conformational Boltzmann distributions with AlphaFold2 predictions: opportunities and limitations
BP Brown, RA Stein, J Meiler, HS Mchaourab
Journal of Chemical Theory and Computation 20 (3), 1434-1447, 2024
292024
Computationally designed cyclic peptides derived from an antibody loop increase breadth of binding for influenza variants
AM Sevy, IM Gilchuk, BP Brown, NG Bozhanova, R Nargi, M Jensen, ...
Structure 28 (10), 1114-1123. e4, 2020
292020
Allele-specific activation, enzyme kinetics, and inhibitor sensitivities of EGFR exon 19 deletion mutations in lung cancer
BP Brown, YK Zhang, S Kim, P Finneran, Y Yan, Z Du, J Kim, AL Hartzler, ...
Proceedings of the National Academy of Sciences 119 (30), e2206588119, 2022
262022
BCL:: MolAlign: three-dimensional small molecule alignment for pharmacophore mapping
BP Brown, J Mendenhall, J Meiler
Journal of chemical information and modeling 59 (2), 689-701, 2019
252019
Acquired Secondary HER2 Mutations Enhance HER2/MAPK Signaling and Promote Resistance to HER2 Kinase Inhibition in Breast Cancer
A Marín, AA Mamun, H Patel, H Akamatsu, D Ye, DR Sudhan, L Eli, ...
Cancer research 83 (18), 3145-3158, 2023
222023
Computational identification of HCV neutralizing antibodies with a common HCDR3 disulfide bond motif in the antibody repertoires of infected individuals
NG Bozhanova, AI Flyak, BP Brown, SE Ruiz, J Salas, S Rho, ...
Nature communications 13 (1), 3178, 2022
82022
Analysis of EGFR binding hotspots for design of new EGFR inhibitory biologics
CW Tydings, B Singh, AW Smith, KV Ledwitch, BP Brown, CM Lovly, ...
Protein Science 33 (10), e5141, 2024
62024
Macrocyclic octapeptide binding and inferences on protein substrate binding to histone deacetylase 6
PR Watson, S Gupta, P Hosseinzadeh, BP Brown, D Baker, ...
ACS chemical biology 18 (4), 959-968, 2023
62023
Dissecting monomer-dimer equilibrium of an RNase P protein provides insight into the synergistic flexibility of 5’leader pre-tRNA recognition
D Zeng, A Abzhanova, BP Brown, NJ Reiter
Frontiers in Molecular Biosciences 8, 730274, 2021
62021
Lipocalin Blc is a potential heme‐binding protein
NG Bozhanova, MW Calcutt, WN Beavers, BP Brown, EP Skaar, J Meiler
FEBS letters 595 (2), 206-219, 2021
62021
Computer-Aided Design and Biological Evaluation of Diazaspirocyclic D4R Antagonists
CAH Jones, BP Brown, DC Schultz, J Engers, VM Kramlinger, J Meiler, ...
ACS chemical neuroscience 15 (12), 2396-2407, 2024
42024
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Articles 1–20