WO2025119335A1 - Co-crystal form of rna m6a modulator and preparation method therefor and use thereof - Google Patents
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- C07D207/04—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having no double bonds between ring members or between ring members and non-ring members
- C07D207/10—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having no double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
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- C07D213/02—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
- C07D213/04—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
- C07D213/60—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
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- C07D213/02—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
- C07D213/04—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
- C07D213/60—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D213/78—Carbon atoms having three bonds to hetero atoms, with at the most one bond to halogen, e.g. ester or nitrile radicals
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Definitions
- the present invention belongs to the technical field of medicinal chemistry, and specifically relates to a co-crystal form of an RNA m6A regulator and a preparation method and application thereof.
- Hand-foot syndrome and hand-foot skin reaction (HFSR) are erythematous skin lesions on the palms and soles of the feet, mainly caused by cytotoxic chemotherapy drugs and tumor-targeted drugs. In severe cases, patients may lose their ability to take care of themselves.
- the main pathological features of hand-foot syndrome and hand-foot skin reaction are vacuolar degeneration of basal keratinocytes, lymphocyte infiltration around skin blood vessels, keratinocyte apoptosis and skin edema; inflammatory changes, vascular dilation, edema and leukocyte infiltration can be seen under the microscope.
- Drugs that can cause hand-foot syndrome include chemotherapy drugs such as capecitabine, liposomal doxorubicin, cytarabine, docetaxel, vinorelbine, continuous infusion doxorubicin, and gemcitabine; drugs that can cause hand-foot skin reactions include targeted drugs such as sonitinib (Sutent), sorafenib (Nexavar), imatinib (Gleevec), and erlotinib (Tarceva).
- chemotherapy drugs such as capecitabine, liposomal doxorubicin, cytarabine, docetaxel, vinorelbine, continuous infusion doxorubicin, and gemcitabine
- drugs that can cause hand-foot skin reactions include targeted drugs such as sonitinib (Sutent), sorafenib (Nexavar), imatinib (Gleevec), and erlotinib (Tarceva).
- the World Health Organization divides HFS into 4 grades: Grade 1, numbness, paresthesia, or tingling in the hands and feet; Grade 2, discomfort when holding objects and walking, painless swelling or erythema; Grade 3, painful erythema, edema of the palms and soles, periungual erythema and swelling; Grade 4, peeling, ulceration, blistering, and severe pain.
- Grade 1 numbness, paresthesia, or tingling in the hands and feet
- Grade 2 discomfort when holding objects and walking, painless swelling or erythema
- Grade 3 painful erythema, edema of the palms and soles, periungual erythema and swelling
- Grade 4 peeling, ulceration, blistering, and severe pain.
- severe hand-foot syndrome and hand-foot skin reactions in clinical practice are often relieved by superficial skin care only, and even need to be discontinued.
- Existing treatments only treat the symptoms and not the root cause, which seriously limits the use of first-line tumor chemotherapy drugs. Therefore,
- m6A methylation modification is the most common RNA modification in mammals. It can regulate a variety of signaling pathways and cellular processes (such as growth, development, and disease) to play a key biological role (Frye M., et al. Science 2018, 361, 2073-2092; Yang C., et al. Cell Death & Disease 2020, 11, 960; Meyer K.D. & Jaffrey S.R. Nature Review Molecular Cell Biology 2014, 15, 313-326).
- the m6A methylation modification of mRNA, miRNA, circRNA, and lncRNA is a dynamic and reversible process.
- Methyltransferases (such as METTL3, METTL14, and METTL16) bind methyl groups to RNA, while demethylases (FTO and ALKBH5) can erase the methyl groups on RNA, thus forming the regulatory basis of m6A.
- m6A affects RNA processing, translation, and degradation by recruiting specific binding proteins (such as YTHDF1, YTHDF2, YTHDC1, and IGF2BP), thereby leading to changes in downstream protein function and cell biological behavior (Hsu P.J., et al. Journal of Biological Chemistry 2019, 294, 19889-19895; Yao Y., et al. FASEB Journal 2019, 33, 7529-7544).
- RNA m6A-related methylases or demethylases that play a role in skin diseases (especially skin tumors).
- the mRNA expression levels of METTL3 and ALKBH5 in tumor tissues of patients with acrofacial melanoma are significantly higher than those in adjacent tissues, and the mRNA expression level of METTL3 in patients with advanced acrofacial melanoma is significantly higher than that in patients with early-stage melanoma (Le Zhanghui, Preliminary study on the pathogenesis of LncRNA and RNA m6A methylation in acrofacial melanoma, dissertation, 2019).
- m6A-specific binding proteins YTHDF1 and HNRNPA2B1 can be used as new biomarkers (Li T.D., et al. Cancer Cell 2020, 20, 239).
- keratinocytes it has only been reported that long-term, low-level arsenic exposure can inhibit selective autophagy caused by m6A demethylase, thereby inducing the occurrence of skin tumors (Cui Y.H., et al. Nature Communications 2021, 12, 2183).
- the present invention provides a co-crystal form of an RNA m6A regulator as shown in formula (I), and a preparation method and application thereof.
- the present invention provides a pharmaceutical co-crystal formed by combining a compound represented by formula (I) and a co-crystal former, wherein the co-crystal former is selected from nicotinamide, isonicotinamide, L-proline, glycolic acid,
- the X-ray powder diffraction pattern expressed as a diffraction angle 2 ⁇ has characteristic peaks at 13.641, 14.019, 18.822, 21.196 and 26.566; preferably, characteristic peaks at 9.386, 11.847, 13.641, 14.019, 15.097, 18.822, 21.196, 23.762, 24.300, 26.566 and 35.936; preferably, characteristic peaks at 6 .139, 9.386, 11.847, 13.641, 14.019, 15.097, 16.746, 17.556, 17.893, 18.822, 21.196, 23.762, 24.300, 26.354, 26.566, 33.296 and 35.936; the most preferred X-ray powder diffraction pattern expressed in terms of diffraction angle 2 ⁇ is shown in Figure 1.
- the present invention provides a drug co-crystal formed by a compound represented by formula (I) and glycolic acid.
- the X-ray powder diffraction pattern expressed as a diffraction angle 2 ⁇ has characteristic peaks at 10.588, 17.645, 21.232, 21.527 and 23.125; preferably, characteristic peaks are at 10.588, 12.575, 17.645, 18.231, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 and 27.608; preferably, characteristic peaks are at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 , 27.608, 28.937, 30.376 and 33.925; preferably, there are characteristic peaks at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 20.417, 21.232, 21.527, 23.125, 24.776, 25.300, 26.840, 27.608, 28.937, 30.116, 30.376, 32.070, 33.925, 35.159, 35.368 and 36.010
- the present invention provides a drug co-crystal formed by a compound represented by formula (I) and L-proline.
- the X-ray powder diffraction pattern expressed as a diffraction angle 2 ⁇ has characteristic peaks at 10.302, 14.229, 14.871, 19.762 and 20.643; preferably at 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.643, 23.211, 28.621 and 31.158; preferably at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.113, 20.643, 22.829, 23.211, 23.611 , 26.465, 28.621, 31.158 and 37.176 have characteristic peaks; preferably, there are characteristic peaks at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 15.763, 16.443, 18.719, 19.762, 20.113, 20.643, 21.217, 21.383, 21.899, 22.829, 23.211, 23.611, 26.465, 28.621, 31.158 and 37.176; most preferably, the X-ray powder dif
- the present invention provides a drug co-crystal formed by a compound represented by formula (I) and nicotinamide.
- the X-ray powder diffraction pattern represented by the diffraction angle 2 ⁇ has characteristic peaks at 13.311, 17.017, 19.752, 23.638 and 26.573; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.638, 24.147, 26.573, 27.028 and 32.820; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 14.747, 24.780, 26.165, 26.573, 27.028, 30.766, 32.820 and 36.741; preferably, there are characteristic peaks at 9.860, 11.529, 13.311, 14.036, 16.007, 17.017, 17.503, 19.752, 20.856, 21.661, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 27.028, 30.766, 32.2
- the drug co-crystals formed by the compound of formula (I) and isonicotinamide, the drug co-crystals formed by the compound of formula (I) and glycolic acid, the drug co-crystals formed by the compound of formula (I) and L-proline, and the drug co-crystals formed by the compound of formula (I) and nicotinamide provided by the present invention have advantages in terms of physical and chemical properties, preparation processing performance and bioavailability, for example, at least one of the aspects of melting point, solubility, hygroscopicity, purification effect, stability, adhesion, compressibility, fluidity, in vivo and in vitro dissolution, and bioavailability has advantages.
- the drug co-crystals formed by combining the compound of formula (I) and the co-crystal former according to the present invention have good physical and chemical stability, a high yield of crystal forms prepared with the same starting materials, and obvious advantages in terms of solubility, hygroscopicity, stability, mechanical stability, fluidity, compressibility and adhesion, etc., which provide a new and better choice for the development of RNA m6A regulator drugs, and are of great significance.
- FIG1 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and isonicotinamide.
- FIG2 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and isonicotinamide.
- FIG3 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and isonicotinamide.
- FIG4 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and glycolic acid.
- FIG5 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and glycolic acid.
- FIG6 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and glycolic acid.
- FIG. 7 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and L-proline.
- FIG8 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and L-proline.
- FIG9 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and L-proline.
- FIG10 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide.
- FIG11 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide.
- FIG12 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide.
- FIG. 13 depicts exemplary results of cellular m6A levels and m6A levels of NAP1L2 measured by nanopore sequencing 24 hours after administration of sorafenib, capecitabine, docetaxel, and osimertinib to keratinocytes HaCat.
- FIG. 14 depicts exemplary results of cellular m6A levels and m6A levels of NAP1L2 in mouse hind limb skin tissue in Example 3.
- FIG. 15 depicts exemplary results of the expression level of NAP1L2 mRNA measured by RT-PCR 24 hours after administration of human recombinant METTL3 protein, human recombinant FTO protein, or transfection of METTL3 siRNA and FTO siRNA to keratinocytes HaCat.
- 16 depicts exemplary results of mRNA and protein expression levels of matrix metalloproteinases measured by RT-PCR and Western blotting 24 hours after administration of human recombinant NAP1L2 protein, sorafenib, capecitabine, docetaxel and osimertinib, or transfection of NAP1L2 siRNA to keratinocytes HaCat.
- FIG. 17 depicts exemplary results of mRNA and protein expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin measured by RT-PCR and Western blotting 24 hours after administration of human recombinant HBEGF protein, HBEGF antibody or transfection of siRNA of METTL3 and NAP1L2 to keratinocytes HaCat.
- FIG. 18 depicts exemplary results of measuring the level of cellular m6A methylation inhibition by LC-MS 24 hours after administration of the compound of formula (I), nicotinamide, and UZH2 to THP-1 cells.
- FIG. 19 depicts exemplary results of mRNA expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin measured by RT-PCR 24 hours after administration of human recombinant HBEGF protein and the compound of formula (I) to keratinocytes HaCaT.
- FIG. 20 depicts exemplary results of the measurement of stratum corneum thickness of rat paw plantar skin in Example 10.
- FIG. 21 depicts exemplary histopathological results of epithelial blisters, inflammatory cell infiltration, and skin tissue hyperemia in rat paw plantar skin after tissue staining in Example 10.
- FIG. 22 depicts exemplary results of histopathological scoring of epithelial blisters, inflammatory cell infiltration, and skin tissue hyperemia in rat paw plantar skin after tissue staining in Example 10.
- FIG. 23 depicts exemplary results of mouse hind limb toe skin in Example 11.
- FIG. 24 depicts exemplary results of the degree of swelling of the hind limb toes of mice in Example 11.
- FIG. 25 depicts exemplary results of histopathology of mouse hind limb skin tissue in Example 11.
- FIG. 26 depicts exemplary results of immunohistochemistry for IL-8 in the skin tissue of the hind limbs of mice in the capecitabine modeling series in Example 11.
- FIG. 27 depicts exemplary results of immunohistochemistry for IL-6 in the skin tissue of the hind limbs of mice in the docetaxel modeling series in Example 11.
- FIG. 28 depicts exemplary results of mouse hind limb skin in Example 12.
- FIG. 29 depicts exemplary results of the degree of swelling of the mouse hind limb toes in Example 12.
- FIG30 depicts exemplary results of histopathology of mouse hind limb skin tissue in Example 12.
- FIG31 depicts exemplary results of immunohistochemistry of cytokine IL-1 ⁇ in the skin tissue of the hind limbs and toes of mice in the Sorafenib modeling series groups in Example 12.
- FIG32 depicts exemplary results of immunohistochemistry of cytokine IL-1 ⁇ in the skin tissue of the hind limbs and toes of mice in the osimertinib modeling series groups in Example 12.
- the present invention provides a drug co-crystal formed by a compound represented by formula (I) and isonicotinamide.
- the X-ray powder diffraction pattern expressed as a diffraction angle 2 ⁇ has characteristic peaks at 13.641, 14.019, 18.822, 21.196 and 26.566; preferably, characteristic peaks at 9.386, 11.847, 13.641, 14.019, 15.097, 18.822, 21.196, 23.762, 24.300, 26.566 and 35.936; preferably, characteristic peaks at 6 .139, 9.386, 11.847, 13.641, 14.019, 15.097, 16.746, 17.556, 17.893, 18.822, 21.196, 23.762, 24.300, 26.354, 26.566, 33.296 and 35.936; the most preferred X-ray powder diffraction pattern expressed in terms of diffraction angle 2 ⁇ is shown in Figure 1.
- the present invention further provides a method for preparing a drug co-crystal formed by the compound represented by formula (I) and isonicotinamide, comprising the steps of: mixing the compound represented by formula (I) and isonicotinamide, adding solvent 1, stirring, and filtering.
- the solvent 1 is selected from alcohol solvents.
- the solvent 1 is selected from C 1-4 alcohols.
- the solvent 1 is selected from one or more of methanol, ethanol and isopropanol.
- the solvent 1 is selected from ethanol.
- the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
- the present invention further provides a pharmaceutical co-crystal formed by a compound represented by formula (I) and glycolic acid,
- the X-ray powder diffraction pattern expressed as a diffraction angle 2 ⁇ has characteristic peaks at 10.588, 17.645, 21.232, 21.527 and 23.125; preferably, characteristic peaks are at 10.588, 12.575, 17.645, 18.231, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 and 27.608; preferably, characteristic peaks are at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 , 27.608, 28.937, 30.376 and 33.925; preferably, there are characteristic peaks at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 20.417, 21.232, 21.527, 23.125, 24.776, 25.300, 26.840, 27.608, 28.937, 30.116, 30.376, 32.070, 33.925, 35.159, 35.368 and 36.010
- the present invention further provides a method for preparing a drug co-crystal formed by a compound represented by formula (I) and glycolic acid, comprising the steps of: mixing the compound represented by formula (I) and glycolic acid, adding solvent 2, stirring, and filtering.
- the solvent 1 is selected from ester solvents.
- the solvent 1 is selected from one or more of ethyl acetate, n-propyl acetate, isopropyl acetate, n-butyl acetate and isobutyl acetate.
- the solvent 1 is selected from isopropyl acetate.
- the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
- the present invention further provides a pharmaceutical co-crystal formed by a compound represented by formula (I) and L-proline,
- the X-ray powder diffraction pattern expressed as a diffraction angle 2 ⁇ has characteristic peaks at 10.302, 14.229, 14.871, 19.762 and 20.643; preferably at 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.643, 23.211, 28.621 and 31.158; preferably at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.113, 20.643, 22.829, 23.211, 23.611 , 26.465, 28.621, 31.158 and 37.176 have characteristic peaks; preferably, there are characteristic peaks at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 15.763, 16.443, 18.719, 19.762, 20.113, 20.643, 21.217, 21.383, 21.899, 22.829, 23.211, 23.611, 26.465, 28.621, 31.158 and 37.176; most preferably, the X-ray powder dif
- the present invention further provides a method for preparing a drug co-crystal formed by a compound of formula (I) and L-proline, comprising the steps of: mixing the compound of formula (I) and L-proline, adding solvent 3, stirring, and filtering.
- the solvent 3 is selected from alcohol solvents.
- the solvent 3 is selected from C 1-4 alcohols.
- the solvent 3 is selected from one or more of methanol, ethanol and isopropanol.
- the solvent 3 is selected from ethanol.
- the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
- the present invention further provides a drug co-crystal formed by the compound represented by formula (I) and nicotinamide,
- the X-ray powder diffraction pattern represented by the diffraction angle 2 ⁇ has characteristic peaks at 13.311, 17.017, 19.752, 23.638 and 26.573; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.638, 24.147, 26.573, 27.028 and 32.820; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 14.747, 24.780, 26.165, 26.573, 27.028, 30.766, 32.820 and 36.741; preferably, there are characteristic peaks at 9.860, 11.529, 13.311, 14.036, 16.007, 17.017, 17.503, 19.752, 20.856, 21.661, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 27.028, 30.766, 32.2
- the present invention further provides a method for preparing a drug co-crystal formed by the compound represented by formula (I) and nicotinamide, comprising the steps of: mixing the compound represented by formula (I) and nicotinamide, adding solvent 4, stirring, and filtering.
- the solvent 1 is selected from nitrile solvents.
- the solvent 1 is selected from one or more of acetonitrile, trimethylacetonitrile, propionitrile and valeronitrile.
- the solvent 1 is selected from acetonitrile.
- the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
- the present invention further provides a pharmaceutical composition prepared by combining a drug co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and isonicotinamide, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and glycolic acid, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and L-proline, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and nicotinamide.
- the present invention further provides a pharmaceutical composition, comprising a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with isonicotinamide, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with glycolic acid, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with L-proline, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with nicotinamide, and optionally a pharmaceutically acceptable excipient.
- “Pharmaceutically acceptable excipient” refers to a pharmaceutically acceptable material, mixture or solvent that is relevant to the dosage form or consistency of a pharmaceutical composition. Suitable pharmaceutically acceptable excipients will vary depending on the dosage form selected. In addition, pharmaceutically acceptable excipients may be selected based on their specific function in the composition.
- the pharmaceutically acceptable excipients include the following types of excipients: diluents, fillers, penetration enhancers, binders, disintegrants, lubricants, glidants, granulating agents, coating agents, wetting agents, solvents, co-solvents, suspending agents, emulsifiers, flavoring agents, taste masking agents, colorants, anti-caking agents, humectants, chelating agents, plasticizers, viscosity enhancers, antioxidants, preservatives, stabilizers, surfactants and buffers.
- excipients include the following types of excipients: diluents, fillers, penetration enhancers, binders, disintegrants, lubricants, glidants, granulating agents, coating agents, wetting agents, solvents, co-solvents, suspending agents, emulsifiers, flavoring agents, taste masking agents, colorants, anti-caking agents, humectants, chel
- the pharmaceutical composition is a solid dosage form.
- the pharmaceutical composition is a film or coating.
- the pharmaceutical composition is an ointment.
- the pharmaceutical combination is a plaster.
- the pharmaceutical combination is a cream.
- the solid dosage form is a capsule.
- the pharmaceutical combination is a tablet.
- the ointment contains 0 to 50% by weight of the co-crystal of the compound represented by formula (I).
- the present invention further provides a method for preparing a pharmaceutical composition, comprising the step of mixing a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and isonicotinamide, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and glycolic acid, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and L-proline, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and nicotinamide with a pharmaceutically acceptable excipient.
- the present invention further provides a drug co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a drug co-crystal formed by the aforementioned compound of formula (I) and isonicotinamide, or a drug co-crystal formed by the aforementioned compound of formula (I) and glycolic acid, or a drug co-crystal formed by the aforementioned compound of formula (I) and L-proline, or a drug co-crystal formed by the aforementioned compound of formula (I) and nicotinamide, or the aforementioned composition, or the use of the composition prepared by the aforementioned method in the preparation of a drug for treating and/or preventing diseases related to RNA m6A regulation
- the m6A regulation-related disease is an endocrine and metabolic disease, a nervous system disease, a tumor, a cardiovascular disease, an infection, an immune system disease, a genitourinary system disease, a skin and musculoskeletal disease, a respiratory system disease, a genetic disease and deformity, a digestive system disease, an oral and maxillofacial disease, a vascular and lymphatic system disease-related disease or pain.
- the m6A regulation-related disease is hand-foot syndrome, hand-foot skin reaction, cancer, or a dermatological disease.
- the "2 ⁇ or 2 ⁇ angle" mentioned in the present invention refers to the diffraction angle, ⁇ is the Bragg angle, and the unit is ° or degree; the error range of each characteristic peak 2 ⁇ is ⁇ 0.2 (including the case where the number exceeding 1 decimal place is rounded off), which can be -0.20, -0.19, -0.18, -0.17, -0.16, -0.15, -0.14, -0.13, -0.12, -0.11, -0.10, -0.09, - 0.08, -0.07, -0.06, -0.05, -0.04, -0.03, -0.02, -0.01, 0.00, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09, 0.10, 0.11, 0.12, 0.13, 0.14, 0.15, 0.16, 0.17, 0.18, 0.19, 0.20.
- the precipitation methods described in the present invention include but are not limited to stirring, cooling, volatilization, pulping, and precipitation.
- Pulping is a common term in the field of drug preparation, which usually refers to the mechanization or fluidization of solid drug raw materials so that the solid drug is dispersed or suspended in a solvent.
- the beating time is 5h-30h.
- Hygroscopic weight gain due to moisture absorption is less than 15% but not less than 2%;
- weight gain due to moisture absorption is less than 2% but not less than 0.2%;
- weight gain due to moisture is less than 0.2%.
- the “differential scanning calorimetry or DSC” mentioned in the present invention refers to measuring the temperature difference and heat flow difference between a sample and a reference object during the process of heating or maintaining a constant temperature of the sample, so as to characterize all physical and chemical changes related to thermal effects and obtain the phase change information of the sample.
- the drying temperature in the present invention is generally 25° C. to 100° C., preferably 40° C. to 70° C., and the drying can be performed under normal pressure or reduced pressure.
- the crystal form of the sample was analyzed using a Bruker D8 ADVANCE X-powder diffractometer.
- the sample 2 ⁇ scanning angle was 3° to 40°, the scanning step was 0.02°, and the scanning time per step was 0.12s/step.
- the light tube voltage and current were 40kV and 40mA, respectively.
- the samples were analyzed using TA Instruments TGA Discovery 5500.
- the samples were placed in a tared aluminum pan, the system automatically weighed the samples, and then the samples were heated to the specified temperature at a rate of 10°C/min under nitrogen.
- the samples were analyzed using TA Instruments Discovery 2500. 0.5-1.5 mg of sample was weighed and placed in a sample tray, and the sample was heated to the specified temperature at a rate of 10 °C/min under the protection of nitrogen (50 ml/min).
- the samples were analyzed using ProUmid SPSx-1 ⁇ Advance.
- the test sample size was approximately 5-50 mg.
- the temperature of the test chamber was controlled between 25 ⁇ 1°C, the relative humidity cycle was 40-95-0-95-40%, the step was 10%, the balance was 240 minutes per step, and the mass data was recorded every 20 seconds.
- 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid ethyl ester 16 mg.
- 10 mg of 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid ethyl ester (0.036 mmol) was dissolved in 10 mL of ethanol, and 2 mL of 2M LiOH solution was added. The mixture was stirred at room temperature for 1 hour, and then 20 mL of water was added for dilution after rotary distillation to adjust the pH to 2.
- Example 2 Drug-induced changes in keratinocyte mRNA methylation levels
- HaCat cells 1*10 8 HaCat cells were plated in a culture dish, and 50 nM drugs (sorafenib, capecitabine, docetaxel and osimertinib) were added respectively. The cells were cultured at 37°C in an incubator containing 5% CO 2 for 24 hours. The culture medium was discarded and washed with PBS. After centrifugation and discarding the supernatant, 400 ⁇ L RLT cell lysis buffer (QIAGEN, Cat.#79216) was added. Some samples were taken, 400 ⁇ L 70% ethanol was added, stirred evenly, and transferred to RNeasy mini columns. RNA was extracted using RNeasy mini kit (QIAGEN, Cat.#74104). 2 ⁇ L RNA samples were dissolved in 98 ⁇ L 10 mM Tris-HCl buffer, and the absorbance at 260 nm was measured using Nanodrop (Thermo Fisher Scientific) to determine the RNA concentration.
- drugs as orafenib, capecita
- RNA sample was taken and enriched with NEBNext Poly(A) mRNA Magnetic Separation Module (NEB, Cat.#E7490), and then the reverse transcription adapter RTA was connected to the 3' end of the enriched mRNA (PolyA+RNA) molecule using the direct RNA sequencing kit (Oxfod Nanopore Technologies, Cat.#SQK-RNA002).
- the mRNA (PolyA+RNA) molecule was used as a template for reverse transcription reaction to synthesize its complementary chain, and the reverse transcription adapter RTA end was connected to the sequencing adapter (RNA adapter) to form the final sequencing library, and the Qubit TM dsDNA HS assay kit (Invitrogen, Cat.#LOT2133187) was used for quantitative detection.
- the prepared sequencing library was loaded into the PromethION Flow Cell chip (Oxfod Nanopore Technologies, Cat. #FLO-MIN106D) and placed into the PromenthION sequencer (Oxfod Nanopore Technologies) to select the matching sequencing mode for sequencing.
- the sequencing data was base called by guppy, and the m6A methylation analysis was performed with the original fast5 data.
- mice ICR male mice (5-6 weeks old, weighing about 35 grams) were randomly divided into groups after 7 days of adaptive feeding, with 6 mice in each group: blank control group, sorafenib group, capecitabine group, docetaxel group and osimertinib group.
- Each group was given the corresponding modeling drugs (sorafenib 100 mg/kg, capecitabine 200 mg/kg, docetaxel 25 mg/kg, osimertinib 10 mg/kg) by gavage once a day, and the mice were killed after 30 consecutive days of administration, and the skin tissue of the hind limbs and toes of the mice was obtained.
- tissue sample Take a small amount of tissue sample, put it into a mortar filled with liquid nitrogen and grind it into powder, add single-phase lysis solution, leave it at room temperature for 5 minutes, centrifuge (12000rpm) for 5 minutes, take 1mL supernatant, add 200 ⁇ L chloroform, shake and mix, leave it at room temperature for 15 minutes, centrifuge (12000rpm, 4°C) for 15 minutes, aspirate the upper aqueous phase and add an equal volume of isopropanol, leave it at -20°C for 1 hour, centrifuge (12000rpm, 4°C), and discard the supernatant.
- RNA sample Take 2 ⁇ L RNA sample and dissolve it in 98 ⁇ L 10mM Tris-HCl buffer, and measure the absorbance at 260nm with Nanodrop (Thermo Fisher Scientific) to determine the RNA concentration.
- RNA sample was taken and enriched with NEBNext Poly(A) mRNA Magnetic Separation Module (NEB, Cat.#E7490), and then the reverse transcription adapter RTA was connected to the 3' end of the enriched mRNA (PolyA+RNA) molecule using the direct RNA sequencing kit (Oxfod Nanopore Technologies, Cat.#SQK-RNA002).
- the mRNA (PolyA+RNA) molecule was used as a template for reverse transcription reaction to synthesize its complementary chain, and the reverse transcription adapter RTA end was connected to the sequencing adapter (RNA adapter) to form the final sequencing library, and the Qubit TM dsDNA HS assay kit (Invitrogen, Cat.#LOT2133187) was used for quantitative detection.
- the prepared sequencing library was loaded into the PromethION Flow Cell chip (Oxfod Nanopore Technologies, Cat. #FLO-MIN106D) and placed into the PromenthION sequencer (Oxfod Nanopore Technologies) to select the matching sequencing mode for sequencing.
- the sequencing data was base called by guppy, and the m6A methylation analysis was performed with the original fast5 data.
- Example 4 m6A regulates the mRNA expression level of NAP1L2
- HaCat cells were plated in a culture dish, and m6A methylase METTL3 recombinant protein (Abcam, Cat.#ab271611) and m6A demethylase FTO recombinant protein (Abcam, Cat.#ab271525) were added, or METTL3 siRNA (sh-METTL3, GeneCare) and FTO siRNA (sh-FTO, GeneCare) were transfected, and the cells were placed in an incubator containing 5% carbon dioxide at 37°C for 24 hours. After washing with PBS, the cells were collected by high-speed centrifugation.
- Example 5 NAP1L2 regulates the expression of metal matrix proteins in human keratinocytes HaCat
- RNA was reverse transcribed into cDNA using a cDNA reverse transcription kit (Transgene Biotech, Cat. #AT311-03). 1.25 ⁇ L primers (Sino Biological, Cat. #HP100168 & HP100367), 10 ⁇ L iTag Universal SYBR Green supermix (Bio-Rad, Cat. #172-5125) and an appropriate amount of DEPC ultrapure water were added to prepare a 20 ⁇ L reaction solution for RT-PCR reaction. After the reaction, the reaction solution was subjected to agarose gel electrophoresis to determine the mRNA expression of metal matrix protein.
- Trizol reagent Sigma Aldrich
- Example 6 m6A regulates the expression of human keratinocyte differentiation markers
- HaCat cells were plated in a culture dish, recombinant HBEGF protein (Thermo Fisher Scientific, Cat.#100-47-1mg) was added, and the cells were placed in an incubator containing 5% carbon dioxide at 37°C for 24 hours.
- HBEGF antibody Invitrogen, Cat.#406316
- siRNA of METTL3 siRNA of METTL3
- siRNA of NAP1L2 siRNA of NAP1L2
- RLT lysis buffer was added to the above collected cells, shaken at 4°C for half an hour, and the supernatant was taken after centrifugation.
- the protein expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin were measured by Western blotting.
- Example 7 Effects of compounds on m6A methylation levels in THP-1 cells
- 1*10 8 THP-1 cells were plated in a culture dish, and 4 nM and 400 nM of the compound of formula (I), 4 nM and 4 ⁇ M nicotinamide, and 5 ⁇ M of m6A methylase inhibitor UZH2 were added, respectively, and cultured at 37°C in an incubator containing 5% CO 2 for 24 hours.
- the culture medium was discarded and washed with PBS, centrifuged and the supernatant was discarded, 400 ⁇ L of RLT cell lysis buffer was added, and stored at -80°C.
- RNA sample was taken, 400 ⁇ L of 70% ethanol was added and stirred evenly, 700 ⁇ L of the sample was transferred to an RNeasy centrifugal column and centrifuged for 15 seconds (8000g, 25°C), 700 ⁇ L of RW1 buffer was added and centrifuged for 15 seconds (8000g, 25°C), and then 500 ⁇ L of RPE buffer was added and centrifuged for 16 seconds (8000g, 25°C), and the above steps were repeated twice and centrifuged for 2 minutes to completely remove the eluent. Add 30 ⁇ L of nuclease-free water to the column, incubate for 5 minutes, centrifuge for 2 minutes (12000 g, 25°C), and repeat this step 3 times. Take 2 ⁇ L of RNA sample and dissolve it in 98 ⁇ L of 10 mM Tris buffer, and measure the absorbance at 260 nm with Nanodrop to determine the RNA concentration.
- RNA Clean&Concentrator kit Take 50 ⁇ g of total RNA and dissolve it in 100 ⁇ L of nuclease-free water. Resuspend Oligo(dT) magnetic beads, transfer 50 ⁇ L of magnetic beads to a 1.5mL test tube, add 500 ⁇ L of binding buffer, let stand and remove the supernatant. Add 100 ⁇ L of RNA sample to 200 ⁇ L of magnetic bead suspension and mix, stir and incubate at 25°C in a Theromixer for 5 minutes, discard the supernatant and add 200 ⁇ L of wash buffer, repeat twice and centrifuge for 10 seconds (2000g, 25°C). Add 50 ⁇ L of elution buffer and mix well, heat to 75°C, transfer the supernatant to a new 1.5mL test tube, and use RNA Clean&Concentrator kit to purify and measure the RNA concentration.
- m6A inhibition rate (%) (measured ion peak area - blank control) / (positive ion peak area - blank control) * 100
- the compound of formula (I) can significantly inhibit the m6A methylation level of cellular mRNA, and it is concentration-dependent. At a concentration of 400nM, the compound of formula (I) has an m6A inhibitory activity comparable to that of the m6A methylase inhibitor UZH2 at a concentration of 5 ⁇ M. However, nicotinamide has no inhibitory effect on the m6A methylation level of cellular mRNA at either low concentration (4nM) or high concentration (4 ⁇ M).
- Example 8 Effects of compounds on m6A methylation levels in human keratinocytes
- HaCat cells were cultured in DMEM medium containing 10% fetal bovine serum, 100U/mL penicillin and 100 ⁇ g/mL streptomycin, and the culture dishes were placed in an incubator containing 5% CO2 and cultured at 37°C for 24 hours.
- An equal volume of DMSO was added to control group 1, and 50nM sorafenib, capecitabine, docetaxel and osimertinib were added to control groups A, B, C and D, respectively.
- 400nM of the test compound or nicotinamide was added to sample groups A1, A2, B1, B2, C1, C2, D1 and D2, respectively.
- RNA Methylation Quantification Kit The positive control sample concentrations used in the standard curve were 0.01ng/ ⁇ l, 0.02ng/ ⁇ l, 0.05ng/ ⁇ l, 0.1ng/ ⁇ l, 0.2ng/ ⁇ l and 0.5ng/ ⁇ l, and the absorbance at 450nm was read using a microplate reader (Tecan GENios).
- the quantitative calculation formula for m6A is as follows:
- m6A (ng) (absorbance of sample well – absorbance of background well) / slope of standard curve
- m6A (%) m6A (ng) / sample RNA amount (ng) * 100%
- Table 1 shows the fold change of m6A methylation level relative to control group 1.
- Example 9 Inhibitory effect of compounds on keratinocyte HaCaT differentiation
- Human keratinocytes HaCaT were cultured in DMEM medium containing 10% fetal bovine serum, 100 U/mL penicillin and 100 ⁇ g/mL streptomycin. The cells were plated in a 96-well plate at a density of 2*10 6 cells per square centimeter and cultured at 37°C in an incubator containing 5% carbon dioxide for 24 hours. An equal volume of DMSO was added to control well 1, 2.5 ng/mL human recombinant HBEGF protein (Abcam, ab205523) was added to control well 2, and 2.5 ng/mL human recombinant HBEGF protein and the corresponding concentration of the test compound were added to the sample wells.
- 1.25 ⁇ L of primers primer sequences are shown in Table 2
- 10 ⁇ L of iTag Universal SYBR Green supermix Bio-Rad, 172-5125
- DEPC ultrapure water were added to prepare a 20 ⁇ L reaction solution for RT-PCR reaction. After the reaction, the reaction solution was subjected to agarose gel electrophoresis to determine the mRNA expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin.
- Example 10 Inhibitory effect of compounds on keratinocyte differentiation in rat hand-foot skin reaction model
- the modeling drugs (sorafenib, erlotinib, afatinib and osimertinib) were dissolved in solutions containing 5% DMSO, 45% PEG400 and 50% H 2 O, respectively, and the modeling drugs were fixed to the required concentrations and administered by gavage once a day according to the doses shown in Table 3.
- the ointment used for the test compound was prepared by mixing the compound, white beeswax, white vaseline and light liquid paraffin in a certain ratio (the weight ratio of the three ointments was: 1:18:58:23, 3:18:57:22, 10:20:40:30).
- the blank matrix ointment was prepared by mixing white beeswax, white vaseline and light liquid paraffin in a certain ratio (weight ratio: 18:60:22).
- Tissue staining After dewaxing and rehydration of the paw plantar skin tissue sections of the above rats, stain them in hematoxylin solution for several minutes, wash them and soak them in 1% acidic alcohol until the sections fade to light blue-red, wash them in running water for 5 minutes and then stain them with eosin for 2-3 minutes, wash and remove excess dye, add xylene for transparent for several minutes after dehydration, seal them with neutral resin, observe the stratum corneum under an optical microscope, and measure the thickness of the epidermal stratum corneum using Dmetrix software.
- the criteria for successful modeling of the rat model as described above are: (i) symptoms such as erythema, swelling, desquamation, ulcers or blisters appear in the paws; and/or (ii) the thickness of the stratum corneum in tissue staining is significantly higher than that of normal rats; and/or (iii) markers such as KRT1, KRT5 and Loricrin are significantly increased.
- the scoring criteria for rat tissue staining pathology are: no blisters, 0 points; 1-3 blisters, 1 point; 4-6 blisters, 2 points; 7-9 blisters, 3 points; more than 10 blisters, 4 points.
- the inflammation area accounts for less than 10% of the total area of the slice, 0 points; the inflammation area accounts for 10-25% of the total area of the slice, 1 point; the inflammation area accounts for 25-50% of the total area of the slice, 2 points; the inflammation area accounts for 50-75% of the total area of the slice, 3 points; the inflammation area accounts for more than 75% of the total area of the slice, 4 points.
- the congestion area accounts for less than 10% of the total area of the slice, 0 points are given; if the congestion area accounts for 10-25% of the total area of the slice, 1 point is given; if the congestion area accounts for 25-50% of the total area of the slice, 2 points are given; if the congestion area accounts for 50-75% of the total area of the slice, 3 points are given; if the congestion area accounts for more than 75% of the total area of the slice, 4 points are given.
- sorafenib, erlotinib, afatinib and osimertinib were administered orally once a day in SD rats at a dose of 100 mg/kg, 70 mg/kg, 50 mg/kg and 60 mg/kg, respectively, and the success rates of hand-foot skin reaction modeling were 75%, 83.3%, 66.7% and 75%, respectively.
- the compound of formula (I) can significantly reduce the incidence of hand-foot skin reaction at the application site at a low dose (for example, the mass content of the compound is 1%).
- the compound of formula (I) can significantly reduce the incidence of hand-foot skin reaction in all paws of rats at a high mass content (for example, the mass content of the compound is 3% and 10%).
- the results of stratum corneum thickness measurement shown in Figure 20 show that the stratum corneum thickness of the paw and plantar skin of rats successfully modeled with sorafenib, erlotinib, afatinib and osimertinib was significantly higher than that of normal rats.
- the compound of formula (I) can effectively reduce the stratum corneum thickness of the paw and plantar skin of modeled rats.
- the skin toxicity caused by the modeling drugs can form blisters in the subcutaneous and epidermal areas of the rat paws and feet, inflammatory cell infiltration in the dermis, and congestion symptoms in the skin tissue.
- the compound of formula (I) can effectively improve the formation of subcutaneous and epidermal blisters caused by the above-mentioned modeling drugs, inhibit the infiltration of inflammatory cells in the dermis, and significantly improve the skin congestion phenomenon.
- the modeling drugs can cause the formation of blisters in the subcutaneous and epidermal areas of the rat paws, inflammatory cell infiltration in the dermis, and congestion symptoms in the skin tissue.
- the compound of formula (I) can effectively improve the formation of subcutaneous and epidermal blisters caused by the above-mentioned modeling drugs, inhibit the infiltration of inflammatory cells in the dermis, and significantly improve the skin congestion phenomenon.
- the results of immunohistochemical staining also showed that in rats successfully modeled with sorafenib, erlotinib, afatinib and osimertinib, KRT1 and Loricrin were significantly increased in tissues. However, with the addition of the compound, KRT1 and Loricrin were significantly reduced in tissues.
- the compound of formula (I) can effectively inhibit the differentiation of keratinocytes in vitro and in vivo, and has the potential to treat diseases related to hyperkeratosis.
- Example 11 Effect of the compound of formula (I) in the mouse hand-foot syndrome model induced by chemotherapy drugs
- SPF ICR mice Male, 5-6 weeks old, weighing about 35 grams were randomly divided into blank control group (6 mice), capecitabine modeling group (6 mice), docetaxel modeling group (6 mice), capecitabine + compound of formula (I) group (6 mice), docetaxel + compound of formula (I) group (6 mice), capecitabine + nicotinamide group (6 mice) and docetaxel + nicotinamide group (6 mice).
- Each group was given the corresponding modeling drug (capecitabine 200 mg/kg, docetaxel 25 mg/kg) by oral gavage once a day; the blank control group was given an equal volume of normal saline.
- each group was topically applied with the corresponding ointment of the compound of formula (I) used in Example 10 (compound content 3%) or orally administered with nicotinamide (100 mg/kg) once a day for 16 consecutive days.
- a toe swelling tester (KW-7C, Nanjing Calvin Biotechnology Co., Ltd.) was used to measure the swelling of the toes of the hind limbs of mice before administration of modeling drugs, 2 weeks after administration of modeling drugs, and before sacrifice. The same position was marked on the joint of the hind foot of the mice before administration, 2 weeks after administration, and before sacrifice. During measurement, the water was just on the same horizontal line as the marked position, and the value was recorded after it stabilized.
- Skin tissue pathological staining Take skin tissue samples of the hind limbs of mice, fix them in 4% paraformaldehyde at room temperature for 4 hours, take out the tissue and rinse it with running water for several hours, dehydrate it with 70%, 80% and 90% ethanol solutions, and then treat it with a mixed solution of pure alcohol and xylene in equal amounts for 15 minutes, and permeabilize it with xylene solution twice, 15 minutes each time, until the sample is transparent. Soak it in a mixture of half xylene and half paraffin for 15 minutes, and then add paraffin I and paraffin II for permeabilization for one hour each.
- the samples were sliced, baked, dewaxed and hydrated, and then the hydrated sections were placed in hematoxylin solution (Zhongshan Jinqiao, catalog number 23041001) for staining for 3 minutes, and then added with hydrochloric acid ethanol differentiation solution for differentiation for 15 seconds. After washing with water, Scott blueing solution (Servicebio, catalog number 20230801) was added to return to blue for 15 seconds. After rinsing with running water, the sections were stained with eosin staining solution (Solarbio, catalog number 33535) for 3 minutes. After rinsing with running water, the sections were dehydrated, transparent, sealed and examined under a microscope.
- hematoxylin solution Zhongshan Jinqiao, catalog number 23041001
- hydrochloric acid ethanol differentiation solution for differentiation for 15 seconds.
- Scott blueing solution Servicebio, catalog number 20230801
- eosin staining solution Solarbio, catalog number 33535
- Triron-X-100 (Aimejie Technology, item number A-CSH436-100mL) was used for permeabilization, mouse anti-IL-1 ⁇ and rabbit IL-8 were permeabilized for 10 minutes each, and rabbit anti-IL-6 was not permeabilized.
- mice anti-IL-1 ⁇ and rabbit IL-8 were permeabilized for 10 minutes each, and rabbit anti-IL-6 was not permeabilized.
- rabbit anti-IL-6 was not permeabilized.
- 1/150 diluted mouse anti-IL-1 ⁇ (Affinity Biosciences, Catalog No. BF8021)
- 1/200 diluted rabbit anti-IL-8 (Affinity Biosciences, Catalog No. DF6998) or 1/150 diluted rabbit anti-IL-6 (Affinity Biosciences, Catalog No. DF6087) was added to each slide and incubated in a humidified box at 4°C overnight.
- the degree of swelling of the hind limb toes of mice is shown in Figure 24.
- the modeling drugs capecitabine and docetaxel can cause swelling of the hind limb toes of mice after continuous oral administration for 14 days.
- Local application of the ointment of the compound of formula (I) on the hind limb toes of mice can significantly improve the swelling of the toes caused by the modeling drugs (p ⁇ 0.05).
- no significant improvement was observed in the swelling of the hind limb toes of mice after oral administration of 100 mg/kg nicotinamide.
- the results of pathological staining of the toe skin tissue are shown in Figure 25.
- the modeling drugs capecitabine and docetaxel can cause the epidermis and stratum corneum in the skin tissue of the hind limbs of mice to increase significantly after continuous oral administration for 14 days, increase the number of granular cells in the basal layer, and visible inflammatory cell infiltration.
- the ointment of the compound of formula (I) applied locally to the hind limbs of mice can effectively improve the thickening of the epidermis and stratum corneum of the skin tissue, and the morphology of the basal layer cells returns to normal, and no inflammatory cell infiltration is seen.
- nicotinamide has a slight improvement in the thickening of the epidermis and stratum corneum of the skin tissue of the hind limbs of mice, with slightly more granular cells in the basal layer, and inflammatory cell infiltration is still seen.
- Example 12 Effect of the compound of formula (I) in the kinase inhibitor-induced mouse hand-foot skin reaction model
- SPF ICR mice Male, 5-6 weeks old, weighing about 35 grams were randomly divided into blank control group (6 mice), sorafenib modeling group (6 mice), osimertinib modeling group (6 mice), sorafenib + formula (I) compound group (6 mice), osimertinib + formula (I) compound group (6 mice), sorafenib + nicotinamide group (6 mice) and osimertinib + nicotinamide group (6 mice).
- Each group was given the corresponding modeling drug (sorafenib 100 mg/kg, osimertinib 10 mg/kg) by oral gavage once a day; the blank control group was given an equal volume of normal saline.
- each group was topically applied with the corresponding ointment of the compound of formula (I) used in Example 10 (compound content 3%) or orally administered with nicotinamide (100 mg/kg) once a day for 16 consecutive days.
- a toe swelling tester (KW-7C, Nanjing Calvin Biotechnology Co., Ltd.) was used to measure the swelling of the toes of the hind limbs of mice before administration of modeling drugs, 2 weeks after administration of modeling drugs, and before sacrifice. The same position was marked on the joint of the hind foot of the mice before administration, 2 weeks after administration, and before sacrifice. During measurement, the water was just on the same horizontal line as the marked position, and the value was recorded after it stabilized.
- Skin tissue pathological staining Take skin tissue samples of the hind limbs of mice, fix them in 4% paraformaldehyde at room temperature for 4 hours, take out the tissue and rinse it with running water for several hours, dehydrate it with 70%, 80% and 90% ethanol solutions, and then treat it with a mixed solution of pure alcohol and xylene in equal amounts for 15 minutes, and permeabilize it with xylene solution twice, 15 minutes each time, until the sample is transparent. Soak it in a mixture of half xylene and half paraffin for 15 minutes, and then add paraffin I and paraffin II for permeabilization for one hour each.
- the samples were sliced, baked, dewaxed and hydrated, and then the hydrated sections were placed in hematoxylin solution (Zhongshan Jinqiao, catalog number 23041001) for staining for 3 minutes, and then added with hydrochloric acid ethanol differentiation solution for differentiation for 15 seconds. After washing with water, Scott blueing solution (Servicebio, catalog number 20230801) was added to return to blue for 15 seconds. After rinsing with running water, the sections were stained with eosin staining solution (Solarbio, catalog number 33535) for 3 minutes. After rinsing with running water, the sections were dehydrated, transparent, sealed and examined under a microscope.
- hematoxylin solution Zhongshan Jinqiao, catalog number 23041001
- hydrochloric acid ethanol differentiation solution for differentiation for 15 seconds.
- Scott blueing solution Servicebio, catalog number 20230801
- eosin staining solution Solarbio, catalog number 33535
- Triron-X-100 (Aimejie Technology, item number A-CSH436-100mL) was used for permeabilization, mouse anti-IL-1 ⁇ and rabbit IL-8 were permeabilized for 10 minutes each, and rabbit anti-IL-6 was not permeabilized.
- mice anti-IL-1 ⁇ and rabbit IL-8 were permeabilized for 10 minutes each, and rabbit anti-IL-6 was not permeabilized.
- rabbit anti-IL-6 was not permeabilized.
- 1/150 diluted mouse anti-IL-1 ⁇ (Affinity Biosciences, Catalog No. BF8021)
- 1/200 diluted rabbit anti-IL-8 (Affinity Biosciences, Catalog No. DF6998) or 1/150 diluted rabbit anti-IL-6 (Affinity Biosciences, Catalog No. DF6087) was added to each slide and incubated in a humidified box at 4°C overnight.
- the degree of swelling of the hind limb toes of mice is shown in Figure 29.
- the modeling drugs sorafenib and osimertinib can cause significant swelling of the hind limb toes of mice after continuous oral administration for 14 days.
- Local application of the ointment of the compound of formula (I) on the hind limb toes of mice can effectively improve the swelling of the toes caused by the modeling drugs.
- no significant improvement was observed in the swelling of the hind limb toes of mice after oral administration of 100 mg/kg nicotinamide.
- FIG. 30 The results of pathological staining of toe skin tissue are shown in Figure 30.
- the modeling drugs sorafenib and osimertinib can cause the epidermis and stratum corneum in the skin tissue of the hind limbs of mice to increase significantly after continuous oral administration for 14 days, increase the granular cells in the basal layer, and visible inflammatory cell infiltration.
- the ointment of the compound of formula (I) applied locally to the hind limbs of mice can effectively improve the thickening of the epidermis and stratum corneum of the skin tissue, and the morphology of the basal layer cells returns to normal, and no inflammatory cell infiltration is seen.
- nicotinamide has no significant improvement in the thickening of the epidermis and stratum corneum of the skin tissue of the hind limbs of mice, and the morphology of the basal layer cells is slightly restored, and inflammatory cell infiltration is still seen.
- Example 13 Preparation of drug co-crystals formed by the compound represented by formula (I) and isonicotinamide
- Example 15 Preparation of a pharmaceutical co-crystal formed by the compound represented by formula (I) and L-proline
- Table 6 XRPD diffraction peak data of drug co-crystal formed by the compound represented by formula (I) and L-proline
- Example 16 Preparation of a pharmaceutical co-crystal formed by the compound represented by formula (I) and L-proline
- Example 17 Preparation of drug co-crystals formed by the compound represented by formula (I) and nicotinamide
- Example 18 Preparation of drug co-crystals formed by the compound represented by formula (I) and nicotinamide
- glycolic acid cocrystals usually have hygroscopicity problems
- isonicotinamide is similar to nicotinamide, but nicotinamide is a GRAS agent (Generally Recognized As Safe), and isonicotinamide is a non-GRAS agent.
- L-proline cocrystals and nicotinamide cocrystals were selected to continue studying drug properties such as stability and hygroscopicity.
- Example 19 Stability test of drug co-crystals formed by the compound represented by formula (I) and L-proline and drug co-crystals formed by the compound represented by formula (I) and nicotinamide
- the open containers containing the drug co-crystals formed by the compound of formula (I) and L-proline and the drug co-crystals formed by the compound of formula (I) and nicotinamide were placed at 25°C/92.5%RH for one week.
- the drug co-crystals formed by the compound of formula (I) and L-proline and the drug co-crystals formed by the compound of formula (I) and nicotinamide were placed in a sealed container at 60°C for one week.
- the samples after solid stability evaluation were characterized by XRPD and HPLC, and the color change of the samples was observed. The conclusions are shown in Table 8.
- the drug co-crystals formed by the compound represented by formula (I) and L-proline and the drug co-crystals formed by nicotinamide were placed in an open container for one week at 25°C/92%RH or in a closed container for one week at 60°C.
- the drug co-crystals formed by the compound represented by formula (I) and L-proline were partially dissociated into free crystals and L-proline at 25°C/92.5%RH.
- the drug co-crystals formed by the compound represented by formula (I) and nicotinamide were relatively stable under both conditions.
- Example 20 Solubility test of drug co-crystals formed by the compound represented by formula (I) and L-proline and drug co-crystals formed by the compound represented by formula (I) and nicotinamide
- the concentration of the supernatant was determined by HPLC and the pH value of the supernatant was determined by a pH meter. Whether the residual solid (wet product) after 2 hours has a change in crystal form was detected by XRPD. The experimental results are shown in Table 9.
- the drug co-crystals formed by the compound represented by formula (I) and L-proline and the drug co-crystals formed by nicotinamide are transformed into the free crystal form of the compound represented by formula (I) in four different solvents.
- the drug co-crystals formed with L-proline and the drug co-crystals formed with nicotinamide have high solubility in the remaining solvents, and the solubility of the drug co-crystals formed by the compound represented by formula (I) and nicotinamide after being dissolved in the four solvents for 2 hours is higher than that of the drug co-crystals formed with L-proline.
- Example 21 Hygroscopicity test of drug co-crystals formed by the compound represented by formula (I) and L-proline and drug co-crystals formed by the compound represented by formula (I) and nicotinamide
- the drug co-crystal formed by the compound shown in formula (I) and L-proline is slightly hygroscopic between 40% RH and 80% RH, and the weight gain by moisture absorption is about 0.4%; it is extremely hygroscopic between 80% RH and 95% RH, and the weight gain by moisture absorption is about 84.0%.
- the co-crystal is partially dissociated into free crystal form and L-proline.
- the drug co-crystal formed by the compound shown in formula (I) and nicotinamide is slightly hygroscopic, and its weight gain by moisture absorption is about 0.2% between 40% RH and 95% RH at 25°C. After DVS test, the crystal form did not change.
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Abstract
Description
本公开要求在2023年12月08日提交中国专利局、发明名称为“一种RNA m6A调控剂的共晶形式及其制备方法与应用”、申请号为2023116845011的中国专利申请的优先权,以上申请的全部内容通过引用结合在本公开中。The present disclosure claims the priority of a Chinese patent application filed with the Patent Office of China on December 8, 2023, with the invention name “A co-crystal form of an RNA m6A regulator, its preparation method and application” and application number 2023116845011. The entire contents of the above application are incorporated into the present disclosure by reference.
本发明属于医药化学技术领域,具体涉及一种RNA m6A调控剂的共晶形式及其制备方法与应用。The present invention belongs to the technical field of medicinal chemistry, and specifically relates to a co-crystal form of an RNA m6A regulator and a preparation method and application thereof.
手足综合征(hand-foot syndrome,HFS)和手足皮肤反应(hand-foot skin reaction,HFSR),是一种手掌部和足底红斑性皮肤损害,主要由细胞毒性化疗药物和肿瘤靶向药物引起,严重者可导致患者丧失生活自理能力。手足综合征和手足皮肤反应的主要病理特点是基底角质细胞空泡变性、皮肤血管周围淋巴细胞浸润、角质细胞凋亡和皮肤水肿;显微镜下可见炎性改变、血管扩张、水肿和白细胞浸润。Hand-foot syndrome (HFS) and hand-foot skin reaction (HFSR) are erythematous skin lesions on the palms and soles of the feet, mainly caused by cytotoxic chemotherapy drugs and tumor-targeted drugs. In severe cases, patients may lose their ability to take care of themselves. The main pathological features of hand-foot syndrome and hand-foot skin reaction are vacuolar degeneration of basal keratinocytes, lymphocyte infiltration around skin blood vessels, keratinocyte apoptosis and skin edema; inflammatory changes, vascular dilation, edema and leukocyte infiltration can be seen under the microscope.
能够引起手足综合症的药物包括卡培他滨、脂质体阿霉素、阿糖胞苷、多西紫杉醇、长春瑞滨、持续输注阿霉素、吉西他滨等化疗药物;能够引起手足皮肤反应的药物包括索尼替尼(索坦)、索拉菲尼(多吉美)、伊马替尼(格列卫)、厄洛替尼(特罗凯)等靶向药物。世界卫生组织(WHO)将HFS分为4级:1级,手和脚感觉迟钝、感觉异常或刺痛感;2级,持物和走路时不舒适、无痛肿胀或红斑;3级,疼痛的红斑,手掌和脚底水肿,甲周红斑和肿胀;4级,脱皮、溃烂、起疱及剧烈疼痛。目前临床出现严重手足综合征和手足皮肤反应往往仅通过表层皮肤护理缓解症状甚至需要停药,现有治疗手段治标不治本,严重限制了一线肿瘤化疗药物的使用,因此存在巨大的尚未满足的医疗需求。需要开发一种具有良好有效性、副作用少、成本低的药物用于预防和治疗手足综合征和手足皮肤反应,以满足全球日益增长的医疗需求。Drugs that can cause hand-foot syndrome include chemotherapy drugs such as capecitabine, liposomal doxorubicin, cytarabine, docetaxel, vinorelbine, continuous infusion doxorubicin, and gemcitabine; drugs that can cause hand-foot skin reactions include targeted drugs such as sonitinib (Sutent), sorafenib (Nexavar), imatinib (Gleevec), and erlotinib (Tarceva). The World Health Organization (WHO) divides HFS into 4 grades: Grade 1, numbness, paresthesia, or tingling in the hands and feet; Grade 2, discomfort when holding objects and walking, painless swelling or erythema; Grade 3, painful erythema, edema of the palms and soles, periungual erythema and swelling; Grade 4, peeling, ulceration, blistering, and severe pain. At present, severe hand-foot syndrome and hand-foot skin reactions in clinical practice are often relieved by superficial skin care only, and even need to be discontinued. Existing treatments only treat the symptoms and not the root cause, which seriously limits the use of first-line tumor chemotherapy drugs. Therefore, there is a huge unmet medical need. There is a need to develop a drug with good efficacy, few side effects, and low cost for the prevention and treatment of hand-foot syndrome and hand-foot skin reaction to meet the growing medical needs worldwide.
m6A甲基化修饰是哺乳动物中最为普遍的一种RNA修饰,可以调节多种信号通路和细胞过程(如生长、发育以及疾病等)从而发挥关键性的生物作用(Frye M.,et al.Science 2018,361,2073-2092;Yang C.,et al.Cell Death&Disease 2020,11,960;Meyer K.D.&Jaffrey S.R.Nature Review Molecular Cell Biology 2014,15,313-326)。mRNA、miRNA、circRNA和lncRNA的m6A甲基化修饰是一个动态可逆的过程,甲基转移酶(如METTL3、METTL14和METTL16等)将甲基结合到RNA上,而去甲基化酶(FTO和ALKBH5)则可以将RNA上的甲基抹除,从而构成了m6A的调控基础。m6A通过募集特异性结合蛋白(如YTHDF1、YTHDF2、YTHDC1和IGF2BP等)来影响RNA的加工、翻译和降解等过程,从而导致下游蛋白质功能和细胞生物学行为的变化(Hsu P.J.,et al.Journal of Biological Chemistry 2019,294,19889-19895;Yao Y.,et al.FASEB Journal 2019,33,7529-7544)。m6A methylation modification is the most common RNA modification in mammals. It can regulate a variety of signaling pathways and cellular processes (such as growth, development, and disease) to play a key biological role (Frye M., et al. Science 2018, 361, 2073-2092; Yang C., et al. Cell Death & Disease 2020, 11, 960; Meyer K.D. & Jaffrey S.R. Nature Review Molecular Cell Biology 2014, 15, 313-326). The m6A methylation modification of mRNA, miRNA, circRNA, and lncRNA is a dynamic and reversible process. Methyltransferases (such as METTL3, METTL14, and METTL16) bind methyl groups to RNA, while demethylases (FTO and ALKBH5) can erase the methyl groups on RNA, thus forming the regulatory basis of m6A. m6A affects RNA processing, translation, and degradation by recruiting specific binding proteins (such as YTHDF1, YTHDF2, YTHDC1, and IGF2BP), thereby leading to changes in downstream protein function and cell biological behavior (Hsu P.J., et al. Journal of Biological Chemistry 2019, 294, 19889-19895; Yao Y., et al. FASEB Journal 2019, 33, 7529-7544).
目前已知的RNA m6A与皮肤相关疾病的直接关联很少,大多是m6A相关的甲基化酶或者去甲基化酶在皮肤疾病(尤其是皮肤肿瘤)中发挥作用。比如在肢端型黑色素瘤患者的肿瘤组织中METTL3和ALKBH5的mRNA表达水平要显著性的高于癌旁组织,而且晚期肢端型黑色素瘤患者中METTL3的mRNA表达水平要显著性的高于早期患者(乐张慧,LncRNA及RNA m6A甲基化在肢端型黑色素瘤中发病机制的初步研究,学位论文,2019),在黑色素瘤的诊断方面,m6A特异性结合蛋白YTHDF1和HNRNPA2B1可以作为新型生物标志物(Li T.D.,et al.Cancer Cell 2020,20,239)。在角质细胞方面,目前只报道了长期、低水平的砷暴露可以抑制m6A去甲基化酶导致的选择性自噬,从而诱导皮肤肿瘤的发生(Cui Y.H.,et al.Nature Communications 2021,12,2183)。综上所述,目前尚无通过调控RNA m6A甲基化来预防和治疗皮肤疾病的方法。Currently, there are few known direct associations between RNA m6A and skin-related diseases. Most of them are m6A-related methylases or demethylases that play a role in skin diseases (especially skin tumors). For example, the mRNA expression levels of METTL3 and ALKBH5 in tumor tissues of patients with acrofacial melanoma are significantly higher than those in adjacent tissues, and the mRNA expression level of METTL3 in patients with advanced acrofacial melanoma is significantly higher than that in patients with early-stage melanoma (Le Zhanghui, Preliminary study on the pathogenesis of LncRNA and RNA m6A methylation in acrofacial melanoma, dissertation, 2019). In the diagnosis of melanoma, m6A-specific binding proteins YTHDF1 and HNRNPA2B1 can be used as new biomarkers (Li T.D., et al. Cancer Cell 2020, 20, 239). In terms of keratinocytes, it has only been reported that long-term, low-level arsenic exposure can inhibit selective autophagy caused by m6A demethylase, thereby inducing the occurrence of skin tumors (Cui Y.H., et al. Nature Communications 2021, 12, 2183). In summary, there is currently no method to prevent and treat skin diseases by regulating RNA m6A methylation.
鉴于此,特提出本发明。In view of this, the present invention is proposed.
发明要解决的问题Problem that the invention aims to solve
基于多晶型化合物的存在形态和数量是无法预期的,本发明提供一种如式(I)所示的RNA m6A调控剂的共晶形式及其制备方法与应用。
Based on the fact that the existence form and quantity of polymorphic compounds are unpredictable, the present invention provides a co-crystal form of an RNA m6A regulator as shown in formula (I), and a preparation method and application thereof.
用于解决问题的方案Solutions for solving problems
本发明提供一种式(I)所示化合物和共晶形成物结合形成的药物共晶,其中所述共晶形成物选自烟酰胺、异烟酰胺、L-脯氨酸、乙醇酸,
The present invention provides a pharmaceutical co-crystal formed by combining a compound represented by formula (I) and a co-crystal former, wherein the co-crystal former is selected from nicotinamide, isonicotinamide, L-proline, glycolic acid,
式(I)所示化合物与异烟酰胺形成的药物共晶,
The drug co-crystal formed by the compound represented by formula (I) and isonicotinamide,
以衍射角2θ角度表示的X-射线粉末衍射图,在13.641、14.019、18.822、21.196和26.566处有特征峰;优选在9.386、11.847、13.641、14.019、15.097、18.822、21.196、23.762、24.300、26.566和35.936处有特征峰;优选在6.139、9.386、11.847、13.641、14.019、15.097、16.746、17.556、17.893、18.822、21.196、23.762、24.300、26.354、26.566、33.296和35.936处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图1所示。The X-ray powder diffraction pattern expressed as a diffraction angle 2θ has characteristic peaks at 13.641, 14.019, 18.822, 21.196 and 26.566; preferably, characteristic peaks at 9.386, 11.847, 13.641, 14.019, 15.097, 18.822, 21.196, 23.762, 24.300, 26.566 and 35.936; preferably, characteristic peaks at 6 .139, 9.386, 11.847, 13.641, 14.019, 15.097, 16.746, 17.556, 17.893, 18.822, 21.196, 23.762, 24.300, 26.354, 26.566, 33.296 and 35.936; the most preferred X-ray powder diffraction pattern expressed in terms of diffraction angle 2θ is shown in Figure 1.
本发明提供一种式(I)所示化合物与乙醇酸形成的药物共晶,
The present invention provides a drug co-crystal formed by a compound represented by formula (I) and glycolic acid.
以衍射角2θ角度表示的X-射线粉末衍射图,在10.588、17.645、21.232、21.527和23.125处有特征峰;优选在10.588、12.575、17.645、18.231、19.706、21.232、21.527、23.125、24.776、25.300和27.608处有特征峰;优选在10.588、12.575、14.928、17.645、18.231、18.444、19.706、21.232、21.527、23.125、24.776、25.300、27.608、28.937、30.376和33.925处有特征峰;优选在10.588、12.575、14.928、17.645、18.231、18.444、19.706、20.417、21.232、21.527、23.125、24.776、25.300、26.840、27.608、28.937、30.116、30.376、32.070、33.925、35.159、35.368和36.010处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图4所示。The X-ray powder diffraction pattern expressed as a diffraction angle 2θ has characteristic peaks at 10.588, 17.645, 21.232, 21.527 and 23.125; preferably, characteristic peaks are at 10.588, 12.575, 17.645, 18.231, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 and 27.608; preferably, characteristic peaks are at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 , 27.608, 28.937, 30.376 and 33.925; preferably, there are characteristic peaks at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 20.417, 21.232, 21.527, 23.125, 24.776, 25.300, 26.840, 27.608, 28.937, 30.116, 30.376, 32.070, 33.925, 35.159, 35.368 and 36.010; most preferably, the X-ray powder diffraction pattern represented by the diffraction angle 2θ is shown in Figure 4.
本发明提供一种式(I)所示化合物与L-脯氨酸形成的药物共晶,
The present invention provides a drug co-crystal formed by a compound represented by formula (I) and L-proline.
以衍射角2θ角度表示的X-射线粉末衍射图,在10.302、14.229、14.871、19.762和20.643处有特征峰;优选在7.120、10.302、13.153、14.229、14.871、19.762、20.643、23.211、28.621和31.158处有特征峰;优选在6.585、7.120、10.302、13.153、14.229、14.871、19.762、20.113、20.643、22.829、23.211、23.611、26.465、28.621、31.158和37.176处有特征峰;优选在6.585、7.120、10.302、13.153、14.229、14.871、15.763、16.443、18.719、19.762、20.113、20.643、21.217、21.383、21.899、22.829、23.211、23.611、26.465、28.621、31.158和37.176处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图7所示。The X-ray powder diffraction pattern expressed as a diffraction angle 2θ has characteristic peaks at 10.302, 14.229, 14.871, 19.762 and 20.643; preferably at 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.643, 23.211, 28.621 and 31.158; preferably at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.113, 20.643, 22.829, 23.211, 23.611 , 26.465, 28.621, 31.158 and 37.176 have characteristic peaks; preferably, there are characteristic peaks at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 15.763, 16.443, 18.719, 19.762, 20.113, 20.643, 21.217, 21.383, 21.899, 22.829, 23.211, 23.611, 26.465, 28.621, 31.158 and 37.176; most preferably, the X-ray powder diffraction pattern represented by the diffraction angle 2θ is shown in Figure 7.
本发明提供一种式(I)所示化合物与烟酰胺形成的药物共晶,
The present invention provides a drug co-crystal formed by a compound represented by formula (I) and nicotinamide.
以衍射角2θ角度表示的X-射线粉末衍射图,在13.311、17.017、19.752、23.638和26.573处有特征峰;优选在9.860、13.311、17.017、19.752、20.856、23.638、24.147、26.573、27.028和32.820处有特征峰;优选在9.860、13.311、17.017、19.752、20.856、23.161、23.638、24.147、24.780、26.165、26.573、27.028、30.766、32.820和36.741处有特征峰;优选在9.860、11.529、13.311、14.036、16.007、17.017、17.503、19.752、20.856、21.661、23.161、23.638、24.147、24.780、26.165、26.573、27.028、30.766、32.284、32.820和36.741处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图10所示。The X-ray powder diffraction pattern represented by the diffraction angle 2θ has characteristic peaks at 13.311, 17.017, 19.752, 23.638 and 26.573; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.638, 24.147, 26.573, 27.028 and 32.820; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 14.747, 24.780, 26.165, 26.573, 27.028, 30.766, 32.820 and 36.741; preferably, there are characteristic peaks at 9.860, 11.529, 13.311, 14.036, 16.007, 17.017, 17.503, 19.752, 20.856, 21.661, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 27.028, 30.766, 32.284, 32.820 and 36.741; most preferably, the X-ray powder diffraction pattern represented by the diffraction angle 2θ is shown in Figure 10.
发明的效果Effects of the Invention
本发明提供的式(I)所示化合物与异烟酰胺形成的药物共晶、式(I)所示化合物与乙醇酸形成的药物共晶、式(I)所示化合物与L-脯氨酸形成的药物共晶、式(I)所示化合物与烟酰胺形成的药物共晶,其在理化性质,制剂加工性能及生物利用度等方面具有优势,例如在熔点,溶解度,引湿性,提纯作用,稳定性,黏附性,可压性,流动性,体内外溶出,生物有效性等方面中的至少一方面存在优势。本发明所述的式(I)所示化合物和共晶形成物结合形成的药物共晶的自身物理、化学稳定性好,以相同起始物制备得到晶型收率高,且溶解度、引湿性、稳定性、机械稳定性、流动性、可压性和黏附性等方面具有明显优势,为RNA m6A调控剂药物开发提供了新的更好的选择,具有非常重要的意义。The drug co-crystals formed by the compound of formula (I) and isonicotinamide, the drug co-crystals formed by the compound of formula (I) and glycolic acid, the drug co-crystals formed by the compound of formula (I) and L-proline, and the drug co-crystals formed by the compound of formula (I) and nicotinamide provided by the present invention have advantages in terms of physical and chemical properties, preparation processing performance and bioavailability, for example, at least one of the aspects of melting point, solubility, hygroscopicity, purification effect, stability, adhesion, compressibility, fluidity, in vivo and in vitro dissolution, and bioavailability has advantages. The drug co-crystals formed by combining the compound of formula (I) and the co-crystal former according to the present invention have good physical and chemical stability, a high yield of crystal forms prepared with the same starting materials, and obvious advantages in terms of solubility, hygroscopicity, stability, mechanical stability, fluidity, compressibility and adhesion, etc., which provide a new and better choice for the development of RNA m6A regulator drugs, and are of great significance.
图1为式(I)所示化合物与异烟酰胺形成的药物共晶的XRPD谱图。FIG1 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and isonicotinamide.
图2为式(I)所示化合物与异烟酰胺形成的药物共晶的TGA谱图。FIG2 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and isonicotinamide.
图3为式(I)所示化合物与异烟酰胺形成的药物共晶的DSC谱图。FIG3 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and isonicotinamide.
图4为式(I)所示化合物与乙醇酸形成的药物共晶的XRPD谱图。FIG4 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and glycolic acid.
图5为式(I)所示化合物与乙醇酸形成的药物共晶的TGA谱图。FIG5 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and glycolic acid.
图6为式(I)所示化合物与乙醇酸形成的药物共晶的DSC谱图。FIG6 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and glycolic acid.
图7为式(I)所示化合物与L-脯氨酸形成的药物共晶的XRPD谱图。FIG. 7 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and L-proline.
图8为式(I)所示化合物与L-脯氨酸形成的药物共晶的TGA谱图。FIG8 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and L-proline.
图9为式(I)所示化合物与L-脯氨酸形成的药物共晶的DSC谱图。FIG9 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and L-proline.
图10为式(I)所示化合物与烟酰胺形成的药物共晶的XRPD谱图。FIG10 is an XRPD spectrum of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide.
图11为式(I)所示化合物与烟酰胺形成的药物共晶的TGA谱图。FIG11 is a TGA spectrum of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide.
图12为式(I)所示化合物与烟酰胺形成的药物共晶的DSC谱图。FIG12 is a DSC spectrum of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide.
图13描述了向角质细胞HaCat给予索拉非尼、卡培他滨、多西他赛和奥希替尼的24小时后,通过纳米孔测序测定的细胞m6A水平和NAP1L2的m6A水平的示例性结果。FIG. 13 depicts exemplary results of cellular m6A levels and m6A levels of NAP1L2 measured by nanopore sequencing 24 hours after administration of sorafenib, capecitabine, docetaxel, and osimertinib to keratinocytes HaCat.
图14描述了实施例3中小鼠后肢足趾皮肤组织中的细胞m6A水平和NAP1L2的m6A水平的示例性结果。FIG. 14 depicts exemplary results of cellular m6A levels and m6A levels of NAP1L2 in mouse hind limb skin tissue in Example 3.
图15描述了向角质细胞HaCat给予人重组METTL3蛋白、人重组FTO蛋白,或转染METTL3的siRNA和FTO的siRNA的24小时后,通过RT-PCR测定的NAP1L2mRNA表达量的示例性结果。FIG. 15 depicts exemplary results of the expression level of NAP1L2 mRNA measured by RT-PCR 24 hours after administration of human recombinant METTL3 protein, human recombinant FTO protein, or transfection of METTL3 siRNA and FTO siRNA to keratinocytes HaCat.
图16描述了向角质细胞HaCat给予人重组NAP1L2蛋白、索拉非尼、卡培他滨、多西他赛和奥希替尼,或转染NAP1L2的siRNA的24小时后,通过RT-PCR和蛋白印迹测定的金属基质蛋白酶的mRNA和蛋白表达量的示例性结果。16 depicts exemplary results of mRNA and protein expression levels of matrix metalloproteinases measured by RT-PCR and Western blotting 24 hours after administration of human recombinant NAP1L2 protein, sorafenib, capecitabine, docetaxel and osimertinib, or transfection of NAP1L2 siRNA to keratinocytes HaCat.
图17描述了向角质细胞HaCat给予人重组HBEGF蛋白、HBEGF抗体或转染METTL3和NAP1L2的siRNA的24小时后,通过RT-PCR和蛋白印迹测定的角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA和蛋白表达量的示例性结果。17 depicts exemplary results of mRNA and protein expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin measured by RT-PCR and Western blotting 24 hours after administration of human recombinant HBEGF protein, HBEGF antibody or transfection of siRNA of METTL3 and NAP1L2 to keratinocytes HaCat.
图18描述了向THP-1细胞给予式(I)化合物、烟酰胺和UZH2的24小时后,通过LC-MS测定细胞m6A甲基化抑制水平的示例性结果。FIG. 18 depicts exemplary results of measuring the level of cellular m6A methylation inhibition by LC-MS 24 hours after administration of the compound of formula (I), nicotinamide, and UZH2 to THP-1 cells.
图19描述了向角质细胞HaCaT给予人重组HBEGF蛋白和式(I)化合物的24小时后,通过RT-PCR测定的角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA表达量的示例性结果。FIG. 19 depicts exemplary results of mRNA expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin measured by RT-PCR 24 hours after administration of human recombinant HBEGF protein and the compound of formula (I) to keratinocytes HaCaT.
图20描述了实施例10中大鼠爪足跖皮肤角质层厚度测量的示例性结果。FIG. 20 depicts exemplary results of the measurement of stratum corneum thickness of rat paw plantar skin in Example 10.
图21描述了实施例10中组织染色后大鼠爪足跖皮肤上皮水泡、炎症细胞浸润以及皮肤组织充血情况的组织病理示例性结果。FIG. 21 depicts exemplary histopathological results of epithelial blisters, inflammatory cell infiltration, and skin tissue hyperemia in rat paw plantar skin after tissue staining in Example 10.
图22描述了实施例10中组织染色后大鼠爪足跖皮肤上皮水泡、炎症细胞浸润以及皮肤组织充血情况的组织病理打分的示例性结果。FIG. 22 depicts exemplary results of histopathological scoring of epithelial blisters, inflammatory cell infiltration, and skin tissue hyperemia in rat paw plantar skin after tissue staining in Example 10.
图23描述了实施例11中小鼠后肢足趾皮肤的示例性结果。FIG. 23 depicts exemplary results of mouse hind limb toe skin in Example 11.
图24描述了实施例11中小鼠后肢足趾肿胀程度的示例性结果。FIG. 24 depicts exemplary results of the degree of swelling of the hind limb toes of mice in Example 11.
图25描述了实施例11中小鼠后肢足趾皮肤组织的组织病理示例性结果。FIG. 25 depicts exemplary results of histopathology of mouse hind limb skin tissue in Example 11.
图26描述了实施例11中卡培他滨造模系列组别小鼠后肢足趾皮肤组织中细胞因子IL-8的免疫组化示例性结果。FIG. 26 depicts exemplary results of immunohistochemistry for IL-8 in the skin tissue of the hind limbs of mice in the capecitabine modeling series in Example 11.
图27描述了实施例11中多西他赛造模系列组别小鼠后肢足趾皮肤组织中细胞因子IL-6的免疫组化示例性结果。FIG. 27 depicts exemplary results of immunohistochemistry for IL-6 in the skin tissue of the hind limbs of mice in the docetaxel modeling series in Example 11.
图28描述了实施例12中小鼠后肢足趾皮肤的示例性结果。FIG. 28 depicts exemplary results of mouse hind limb skin in Example 12.
图29描述了实施例12中小鼠后肢足趾肿胀程度的示例性结果。FIG. 29 depicts exemplary results of the degree of swelling of the mouse hind limb toes in Example 12.
图30描述了实施例12中小鼠后肢足趾皮肤组织的组织病理示例性结果。FIG30 depicts exemplary results of histopathology of mouse hind limb skin tissue in Example 12.
图31描述了实施例12中索拉非尼造模系列组别小鼠后肢足趾皮肤组织中细胞因子IL-1β的免疫组化示例性结果。FIG31 depicts exemplary results of immunohistochemistry of cytokine IL-1β in the skin tissue of the hind limbs and toes of mice in the Sorafenib modeling series groups in Example 12.
图32描述了实施例12中奥希替尼造模系列组别小鼠后肢足趾皮肤组织中细胞因子IL-1β的免疫组化示例性结果。FIG32 depicts exemplary results of immunohistochemistry of cytokine IL-1β in the skin tissue of the hind limbs and toes of mice in the osimertinib modeling series groups in Example 12.
为使本发明的技术方案和有益效果能够更加明显易懂,下面通过列举具体实施例的方式进行详细说明。其中,附图不一定是按比例绘制的,局部特征可以被放大或缩小,以更加清楚的显示局部特征的细节;除非另有定义,本文所使用的技术和科学术语与本申请所属的技术领域中的技术和科学术语的含义相同。In order to make the technical solutions and beneficial effects of the present invention more clearly understandable, the following is a detailed description by listing specific embodiments. The drawings are not necessarily drawn to scale, and local features may be enlarged or reduced to more clearly show the details of the local features; unless otherwise defined, the technical and scientific terms used herein have the same meanings as those in the technical field to which this application belongs.
本发明提供一种式(I)所示化合物与异烟酰胺形成的药物共晶,
The present invention provides a drug co-crystal formed by a compound represented by formula (I) and isonicotinamide.
以衍射角2θ角度表示的X-射线粉末衍射图,在13.641、14.019、18.822、21.196和26.566处有特征峰;优选在9.386、11.847、13.641、14.019、15.097、18.822、21.196、23.762、24.300、26.566和35.936处有特征峰;优选在6.139、9.386、11.847、13.641、14.019、15.097、16.746、17.556、17.893、18.822、21.196、23.762、24.300、26.354、26.566、33.296和35.936处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图1所示。The X-ray powder diffraction pattern expressed as a diffraction angle 2θ has characteristic peaks at 13.641, 14.019, 18.822, 21.196 and 26.566; preferably, characteristic peaks at 9.386, 11.847, 13.641, 14.019, 15.097, 18.822, 21.196, 23.762, 24.300, 26.566 and 35.936; preferably, characteristic peaks at 6 .139, 9.386, 11.847, 13.641, 14.019, 15.097, 16.746, 17.556, 17.893, 18.822, 21.196, 23.762, 24.300, 26.354, 26.566, 33.296 and 35.936; the most preferred X-ray powder diffraction pattern expressed in terms of diffraction angle 2θ is shown in Figure 1.
本发明进一步提供一种式(I)所示化合物与异烟酰胺形成的药物共晶的制备方法,包括步骤:将式(I)所示化合物与异烟酰胺进行混合,加入溶剂1,搅拌,过滤。The present invention further provides a method for preparing a drug co-crystal formed by the compound represented by formula (I) and isonicotinamide, comprising the steps of: mixing the compound represented by formula (I) and isonicotinamide, adding solvent 1, stirring, and filtering.
在某些实施方式中,所述溶剂1选自醇类溶剂。In certain embodiments, the solvent 1 is selected from alcohol solvents.
在某些实施方式中,所述溶剂1选自C1-4醇。In certain embodiments, the solvent 1 is selected from C 1-4 alcohols.
在某些实施方式中,所述溶剂1选自甲醇、乙醇和异丙醇中的一种或多种。In certain embodiments, the solvent 1 is selected from one or more of methanol, ethanol and isopropanol.
在某些实施方式中,所述溶剂1选自乙醇。In certain embodiments, the solvent 1 is selected from ethanol.
在某些实施方式中,本发明所述的制备方法还包括离心、洗涤或干燥等步骤。In certain embodiments, the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
本发明进一步提供一种式(I)所示化合物与乙醇酸形成的药物共晶,
The present invention further provides a pharmaceutical co-crystal formed by a compound represented by formula (I) and glycolic acid,
以衍射角2θ角度表示的X-射线粉末衍射图,在10.588、17.645、21.232、21.527和23.125处有特征峰;优选在10.588、12.575、17.645、18.231、19.706、21.232、21.527、23.125、24.776、25.300和27.608处有特征峰;优选在10.588、12.575、14.928、17.645、18.231、18.444、19.706、21.232、21.527、23.125、24.776、25.300、27.608、28.937、30.376和33.925处有特征峰;优选在10.588、12.575、14.928、17.645、18.231、18.444、19.706、20.417、21.232、21.527、23.125、24.776、25.300、26.840、27.608、28.937、30.116、30.376、32.070、33.925、35.159、35.368和36.010处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图4所示。The X-ray powder diffraction pattern expressed as a diffraction angle 2θ has characteristic peaks at 10.588, 17.645, 21.232, 21.527 and 23.125; preferably, characteristic peaks are at 10.588, 12.575, 17.645, 18.231, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 and 27.608; preferably, characteristic peaks are at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 21.232, 21.527, 23.125, 24.776, 25.300 , 27.608, 28.937, 30.376 and 33.925; preferably, there are characteristic peaks at 10.588, 12.575, 14.928, 17.645, 18.231, 18.444, 19.706, 20.417, 21.232, 21.527, 23.125, 24.776, 25.300, 26.840, 27.608, 28.937, 30.116, 30.376, 32.070, 33.925, 35.159, 35.368 and 36.010; most preferably, the X-ray powder diffraction pattern represented by the diffraction angle 2θ is shown in Figure 4.
本发明进一步提供一种式(I)所示化合物与乙醇酸形成的药物共晶的制备方法,包括步骤:将式(I)所示化合物与乙醇酸进行混合,加入溶剂2,搅拌,过滤。The present invention further provides a method for preparing a drug co-crystal formed by a compound represented by formula (I) and glycolic acid, comprising the steps of: mixing the compound represented by formula (I) and glycolic acid, adding solvent 2, stirring, and filtering.
在某些实施方式中,所述溶剂1选自酯类溶剂。In certain embodiments, the solvent 1 is selected from ester solvents.
在某些实施方式中,所述溶剂1选自醋酸乙酯、醋酸正丙酯、醋酸异丙酯、醋酸正丁酯和醋酸异丁酯中的一种或多种。In certain embodiments, the solvent 1 is selected from one or more of ethyl acetate, n-propyl acetate, isopropyl acetate, n-butyl acetate and isobutyl acetate.
在某些实施方式中,所述溶剂1选自醋酸异丙酯。In certain embodiments, the solvent 1 is selected from isopropyl acetate.
在某些实施方式中,本发明所述的制备方法还包括离心、洗涤或干燥等步骤。In certain embodiments, the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
本发明进一步提供一种式(I)所示化合物与L-脯氨酸形成的药物共晶,
The present invention further provides a pharmaceutical co-crystal formed by a compound represented by formula (I) and L-proline,
以衍射角2θ角度表示的X-射线粉末衍射图,在10.302、14.229、14.871、19.762和20.643处有特征峰;优选在7.120、10.302、13.153、14.229、14.871、19.762、20.643、23.211、28.621和31.158处有特征峰;优选在6.585、7.120、10.302、13.153、14.229、14.871、19.762、20.113、20.643、22.829、23.211、23.611、26.465、28.621、31.158和37.176处有特征峰;优选在6.585、7.120、10.302、13.153、14.229、14.871、15.763、16.443、18.719、19.762、20.113、20.643、21.217、21.383、21.899、22.829、23.211、23.611、26.465、28.621、31.158和37.176处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图7所示。The X-ray powder diffraction pattern expressed as a diffraction angle 2θ has characteristic peaks at 10.302, 14.229, 14.871, 19.762 and 20.643; preferably at 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.643, 23.211, 28.621 and 31.158; preferably at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 19.762, 20.113, 20.643, 22.829, 23.211, 23.611 , 26.465, 28.621, 31.158 and 37.176 have characteristic peaks; preferably, there are characteristic peaks at 6.585, 7.120, 10.302, 13.153, 14.229, 14.871, 15.763, 16.443, 18.719, 19.762, 20.113, 20.643, 21.217, 21.383, 21.899, 22.829, 23.211, 23.611, 26.465, 28.621, 31.158 and 37.176; most preferably, the X-ray powder diffraction pattern represented by the diffraction angle 2θ is shown in Figure 7.
本发明进一步提供一种式(I)所示化合物与L-脯氨酸形成的药物共晶的制备方法,包括步骤:将式(I)所示化合物与L-脯氨酸进行混合,加入溶剂3,搅拌,过滤。The present invention further provides a method for preparing a drug co-crystal formed by a compound of formula (I) and L-proline, comprising the steps of: mixing the compound of formula (I) and L-proline, adding solvent 3, stirring, and filtering.
在某些实施方式中,所述溶剂3选自醇类溶剂。In certain embodiments, the solvent 3 is selected from alcohol solvents.
在某些实施方式中,所述溶剂3选自C1-4醇。In certain embodiments, the solvent 3 is selected from C 1-4 alcohols.
在某些实施方式中,所述溶剂3选自甲醇、乙醇和异丙醇中的一种或多种。In certain embodiments, the solvent 3 is selected from one or more of methanol, ethanol and isopropanol.
在某些实施方式中,所述溶剂3选自乙醇。In certain embodiments, the solvent 3 is selected from ethanol.
在某些实施方式中,本发明所述的制备方法还包括离心、洗涤或干燥等步骤。In certain embodiments, the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
本发明进一步提供一种式(I)所示化合物与烟酰胺形成的药物共晶,
The present invention further provides a drug co-crystal formed by the compound represented by formula (I) and nicotinamide,
以衍射角2θ角度表示的X-射线粉末衍射图,在13.311、17.017、19.752、23.638和26.573处有特征峰;优选在9.860、13.311、17.017、19.752、20.856、23.638、24.147、26.573、27.028和32.820处有特征峰;优选在9.860、13.311、17.017、19.752、20.856、23.161、23.638、24.147、24.780、26.165、26.573、27.028、30.766、32.820和36.741处有特征峰;优选在9.860、11.529、13.311、14.036、16.007、17.017、17.503、19.752、20.856、21.661、23.161、23.638、24.147、24.780、26.165、26.573、27.028、30.766、32.284、32.820和36.741处有特征峰;最优选以衍射角2θ角度表示的X-射线粉末衍射图谱如图10所示。The X-ray powder diffraction pattern represented by the diffraction angle 2θ has characteristic peaks at 13.311, 17.017, 19.752, 23.638 and 26.573; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.638, 24.147, 26.573, 27.028 and 32.820; preferably, there are characteristic peaks at 9.860, 13.311, 17.017, 19.752, 20.856, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 14.747, 24.780, 26.165, 26.573, 27.028, 30.766, 32.820 and 36.741; preferably, there are characteristic peaks at 9.860, 11.529, 13.311, 14.036, 16.007, 17.017, 17.503, 19.752, 20.856, 21.661, 23.161, 23.638, 24.147, 24.780, 26.165, 26.573, 27.028, 30.766, 32.284, 32.820 and 36.741; most preferably, the X-ray powder diffraction pattern represented by the diffraction angle 2θ is shown in Figure 10.
本发明进一步提供一种式(I)所示化合物与烟酰胺形成的药物共晶的制备方法,包括步骤:将式(I)所示化合物与烟酰胺进行混合,加入溶剂4,搅拌,过滤。The present invention further provides a method for preparing a drug co-crystal formed by the compound represented by formula (I) and nicotinamide, comprising the steps of: mixing the compound represented by formula (I) and nicotinamide, adding solvent 4, stirring, and filtering.
在某些实施方式中,所述溶剂1选自腈类溶剂。In certain embodiments, the solvent 1 is selected from nitrile solvents.
在某些实施方式中,所述溶剂1选自乙腈、三甲基乙腈、丙腈和戊腈中的一种或多种。In certain embodiments, the solvent 1 is selected from one or more of acetonitrile, trimethylacetonitrile, propionitrile and valeronitrile.
在某些实施方式中,所述溶剂1选自乙腈。In certain embodiments, the solvent 1 is selected from acetonitrile.
在某些实施方式中,本发明所述的制备方法还包括离心、洗涤或干燥等步骤。In certain embodiments, the preparation method of the present invention further comprises steps such as centrifugation, washing or drying.
本发明进一步提供一种由前述的式(I)所示化合物和共晶形成物结合形成的药物共晶或前述的式(I)所示化合物与异烟酰胺形成的药物共晶或前述的式(I)所示化合物与乙醇酸形成的药物共晶或前述的式(I)所示化合物与L-脯氨酸形成的药物共晶或前述的式(I)所示化合物与烟酰胺形成的药物共晶制备得到的药物组合物。The present invention further provides a pharmaceutical composition prepared by combining a drug co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and isonicotinamide, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and glycolic acid, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and L-proline, or a drug co-crystal formed by combining the aforementioned compound of formula (I) and nicotinamide.
本发明进一步提供一种药物组合物,含有前述的式(I)所示化合物和共晶形成物结合形成的药物共晶或前述的式(I)所示化合物与异烟酰胺形成的药物共晶或前述的式(I)所示化合物与乙醇酸形成的药物共晶或前述的式(I)所示化合物与L-脯氨酸形成的药物共晶或前述的式(I)所示化合物与烟酰胺形成的药物共晶和任选自药学上可接受的赋形剂。The present invention further provides a pharmaceutical composition, comprising a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with isonicotinamide, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with glycolic acid, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with L-proline, or a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) with nicotinamide, and optionally a pharmaceutically acceptable excipient.
“药学上可接受的赋形剂”是指与给药剂型或药物组合物一致性相关的药学上可接受的材料、混合物或溶媒。合适的药学上可接受的赋形剂会依据所选剂型而不同。此外,可根据他们在组合物中的特定功能来选择药学上可接受的赋形剂。"Pharmaceutically acceptable excipient" refers to a pharmaceutically acceptable material, mixture or solvent that is relevant to the dosage form or consistency of a pharmaceutical composition. Suitable pharmaceutically acceptable excipients will vary depending on the dosage form selected. In addition, pharmaceutically acceptable excipients may be selected based on their specific function in the composition.
在某些实施方式中,所述药学上可接受的赋形剂包括以下类型的赋形剂:稀释剂、填充剂、促渗剂、粘合剂、崩解剂、润滑剂、助流剂、造粒剂、包衣剂、润湿剂、溶剂、共溶剂、助悬剂、乳化剂、矫味剂、掩味剂、着色剂、防结块剂、保湿剂、螯合剂、塑化剂、增粘剂、抗氧化剂、防腐剂、稳定剂、表面活性剂和缓冲剂。In certain embodiments, the pharmaceutically acceptable excipients include the following types of excipients: diluents, fillers, penetration enhancers, binders, disintegrants, lubricants, glidants, granulating agents, coating agents, wetting agents, solvents, co-solvents, suspending agents, emulsifiers, flavoring agents, taste masking agents, colorants, anti-caking agents, humectants, chelating agents, plasticizers, viscosity enhancers, antioxidants, preservatives, stabilizers, surfactants and buffers.
在某些实施方式中,所述药物组合物为固体制剂。In certain embodiments, the pharmaceutical composition is a solid dosage form.
在某些实施方式中,所述药物组合物为膜剂和涂膜剂。In certain embodiments, the pharmaceutical composition is a film or coating.
在某些实施方式中,所述药物组合物为软膏剂。In certain embodiments, the pharmaceutical composition is an ointment.
在某些实施方式中,所述药物组合为硬膏剂。In certain embodiments, the pharmaceutical combination is a plaster.
在某些实施方式中,所述药物组合为乳膏剂。In certain embodiments, the pharmaceutical combination is a cream.
在某些实施方式中,所述固体制剂为胶囊剂。In certain embodiments, the solid dosage form is a capsule.
在某些实施方式中,所述药物组合为片剂。In certain embodiments, the pharmaceutical combination is a tablet.
在某些实施方式中,所述软膏剂中含有式(I)所示化合物的共晶为重量的0~50%。In certain embodiments, the ointment contains 0 to 50% by weight of the co-crystal of the compound represented by formula (I).
本发明进一步提供一种药物组合物的制备方法,包括将前述的式(I)所示化合物和共晶形成物结合形成的药物共晶或前述的式(I)所示化合物与异烟酰胺形成的药物共晶或前述的式(I)所示化合物与乙醇酸形成的药物共晶或前述的式(I)所示化合物与L-脯氨酸形成的药物共晶或前述的式(I)所示化合物与烟酰胺形成的药物共晶与药学上可接受的赋形剂混合的步骤。The present invention further provides a method for preparing a pharmaceutical composition, comprising the step of mixing a pharmaceutical co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and isonicotinamide, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and glycolic acid, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and L-proline, or a pharmaceutical co-crystal formed by the aforementioned compound of formula (I) and nicotinamide with a pharmaceutically acceptable excipient.
本发明进一步提供一种前述的式(I)所示化合物和共晶形成物结合形成的药物共晶或前述的式(I)所示化合物与异烟酰胺形成的药物共晶或前述的式(I)所示化合物与乙醇酸形成的药物共晶或前述的式(I)所示化合物与L-脯氨酸形成的药物共晶或前述的式(I)所示化合物与烟酰胺形成的药物共晶,或前述组合物,或由前述方法制备得到的组合物在制备用于治疗和/或预防RNA m6A调控相关的疾病的药物中的应用The present invention further provides a drug co-crystal formed by combining the aforementioned compound of formula (I) and a co-crystal former, or a drug co-crystal formed by the aforementioned compound of formula (I) and isonicotinamide, or a drug co-crystal formed by the aforementioned compound of formula (I) and glycolic acid, or a drug co-crystal formed by the aforementioned compound of formula (I) and L-proline, or a drug co-crystal formed by the aforementioned compound of formula (I) and nicotinamide, or the aforementioned composition, or the use of the composition prepared by the aforementioned method in the preparation of a drug for treating and/or preventing diseases related to RNA m6A regulation
在某些实施方式中,所述m6A调控相关的疾病为内分泌与代谢疾病、神经系统疾病、肿瘤、心血管疾病、感染、免疫系统疾病、泌尿生殖系统疾病、皮肤和肌肉骨骼疾病、呼吸系统疾病、遗传病和畸形、消化系统疾病、口颌疾病、血管及淋巴系统疾病相关疾病或疼痛。In some embodiments, the m6A regulation-related disease is an endocrine and metabolic disease, a nervous system disease, a tumor, a cardiovascular disease, an infection, an immune system disease, a genitourinary system disease, a skin and musculoskeletal disease, a respiratory system disease, a genetic disease and deformity, a digestive system disease, an oral and maxillofacial disease, a vascular and lymphatic system disease-related disease or pain.
在某些实施方式中,所述m6A调控相关的疾病为手足综合征、手足皮肤反应、癌症、皮肤学疾病。In certain embodiments, the m6A regulation-related disease is hand-foot syndrome, hand-foot skin reaction, cancer, or a dermatological disease.
本发明所述的“2θ或2θ角度”是指衍射角,θ为布拉格角,单位为°或度;每个特征峰2θ的误差范围为±0.2(包括超过1位小数的数字经过四舍五入后的情况),可以为-0.20、-0.19、-0.18、-0.17、-0.16、-0.15、-0.14、-0.13、-0.12、-0.11、-0.10、-0.09、-0.08、-0.07、-0.06、-0.05、-0.04、-0.03、-0.02、-0.01、0.00、0.01、0.02、0.03、0.04、0.05、0.06、0.07、0.08、0.09、0.10、0.11、0.12、0.13、0.14、0.15、0.16、0.17、0.18、0.19、0.20。The "2θ or 2θ angle" mentioned in the present invention refers to the diffraction angle, θ is the Bragg angle, and the unit is ° or degree; the error range of each characteristic peak 2θ is ±0.2 (including the case where the number exceeding 1 decimal place is rounded off), which can be -0.20, -0.19, -0.18, -0.17, -0.16, -0.15, -0.14, -0.13, -0.12, -0.11, -0.10, -0.09, - 0.08, -0.07, -0.06, -0.05, -0.04, -0.03, -0.02, -0.01, 0.00, 0.01, 0.02, 0.03, 0.04, 0.05, 0.06, 0.07, 0.08, 0.09, 0.10, 0.11, 0.12, 0.13, 0.14, 0.15, 0.16, 0.17, 0.18, 0.19, 0.20.
本发明所述的析出方式包括但不限于搅拌、降温、挥发、打浆、沉淀。The precipitation methods described in the present invention include but are not limited to stirring, cooling, volatilization, pulping, and precipitation.
“打浆”是药物制备领域的常用名词,通常是指将固体药物原料进行机械化或流体化处理,使得固体药物分散或混悬于溶剂中。"Pulping" is a common term in the field of drug preparation, which usually refers to the mechanization or fluidization of solid drug raw materials so that the solid drug is dispersed or suspended in a solvent.
在一些实施方式中,所述打浆的时间为5h-30h。In some embodiments, the beating time is 5h-30h.
依据《中国药典》2020年版四部中“9103药物引湿性指导原则”中引湿性特征描述与引湿性增重的界定,According to the description of hygroscopic characteristics and the definition of hygroscopic weight gain in the "9103 Drug Hygroscopicity Guidance Principles" in the fourth volume of the 2020 edition of the Chinese Pharmacopoeia,
潮解:吸收足量水分形成液体;Deliquesce: Absorbs enough water to form a liquid;
极具引湿性:引湿增重不小于15%;Highly hygroscopic: weight gain due to moisture absorption is not less than 15%;
有引湿性:引湿增重小于15%但不小于2%;Hygroscopic: weight gain due to moisture absorption is less than 15% but not less than 2%;
略有引湿性:引湿增重小于2%但不小于0.2%;Slightly hygroscopic: weight gain due to moisture absorption is less than 2% but not less than 0.2%;
无或几乎无引湿性:引湿增重小于0.2%。No or almost no hygroscopicity: weight gain due to moisture is less than 0.2%.
本发明中所述的“差示扫描量热分析或DSC”是指在样品升温或恒温过程中,测量样品与参考物之间的温度差、热流差,以表征所有与热效应有关的物理变化和化学变化,得到样品的相变信息。The "differential scanning calorimetry or DSC" mentioned in the present invention refers to measuring the temperature difference and heat flow difference between a sample and a reference object during the process of heating or maintaining a constant temperature of the sample, so as to characterize all physical and chemical changes related to thermal effects and obtain the phase change information of the sample.
本发明中所述干燥温度一般为25℃~100℃,优选40℃~70℃,可以常压干燥,也可以减压干燥。The drying temperature in the present invention is generally 25° C. to 100° C., preferably 40° C. to 70° C., and the drying can be performed under normal pressure or reduced pressure.
下面通过具体实施例对本发明的方法进行说明,应理解,这些实施例是用于说明本发明的基本原理、主要特征和优点,而本发明不受以下实施例的范围限制;实施例中采用的实施条件可以根据具体要求做进一步调整,未注明的实施条件通常为常规实验中的条件。The method of the present invention is described below by means of specific examples. It should be understood that these examples are used to illustrate the basic principles, main features and advantages of the present invention, and the present invention is not limited to the scope of the following examples; the implementation conditions adopted in the examples can be further adjusted according to specific requirements, and the implementation conditions not specified are usually the conditions in routine experiments.
本发明中所用到的缩写的解释如下:The abbreviations used in the present invention are explained as follows:
XRPD:X射线粉末衍射XRPD: X-ray powder diffraction
DSC:差示扫描量热DSC: Differential Scanning Calorimetry
TGA:热重分析TGA: Thermogravimetric analysis
DVS:动态水分吸附DVS: Dynamic Water Sorption
HPLC:高效液相色谱HPLC: High Performance Liquid Chromatography
检测仪器及方法Testing instruments and methods
X-射线粉末衍射(XRPD)X-ray powder diffraction (XRPD)
利用Bruker D8 ADVANCE X-粉末衍射仪对样品进行晶型分析。样品2θ扫描角度为3°~40°,扫描步长为0.02°,每步扫描时间为0.12s/步。光管电压和电流分别为40kV、40mA。制样时将适量样品放到载样盘上,用玻璃片等工具压平,确保其表面光滑平整。The crystal form of the sample was analyzed using a Bruker D8 ADVANCE X-powder diffractometer. The sample 2θ scanning angle was 3° to 40°, the scanning step was 0.02°, and the scanning time per step was 0.12s/step. The light tube voltage and current were 40kV and 40mA, respectively. When preparing the sample, place an appropriate amount of sample on the sample tray and flatten it with a glass sheet or other tool to ensure that its surface is smooth and flat.
热重分析(TGA)Thermogravimetric analysis (TGA)
采用TA Instruments TGA Discovery 5500对样品进行分析。将样品放入去掉皮重的铝盘中,系统自动称重,然后在氮气的保护下将样品以10℃/min的速率升高到指定温度。The samples were analyzed using TA Instruments TGA Discovery 5500. The samples were placed in a tared aluminum pan, the system automatically weighed the samples, and then the samples were heated to the specified temperature at a rate of 10°C/min under nitrogen.
差示扫描量热分析(DSC)Differential Scanning Calorimetry (DSC)
采用TA Instruments Discovery 2500对样品进行分析。称量0.5~1.5mg样品放入载样盘中,在氮气(50ml/min)的保护下将样品以10℃/min的速率升高到指定温度。The samples were analyzed using TA Instruments Discovery 2500. 0.5-1.5 mg of sample was weighed and placed in a sample tray, and the sample was heated to the specified temperature at a rate of 10 °C/min under the protection of nitrogen (50 ml/min).
动态水分吸附分析(DVS)Dynamic Water Sorption Analysis (DVS)
利用ProUmid SPSx-1μAdvance对样品进行分析。测试样品量约为5~50mg。测试室的温度控制在25±1℃之间,相对湿度循环为40~95~0~95~40%,台阶为10%,平衡为240分钟每个台阶,每20s记录一次质量数据。The samples were analyzed using ProUmid SPSx-1μAdvance. The test sample size was approximately 5-50 mg. The temperature of the test chamber was controlled between 25±1°C, the relative humidity cycle was 40-95-0-95-40%, the step was 10%, the balance was 240 minutes per step, and the mass data was recorded every 20 seconds.
高效液相色谱(HPLC)High Performance Liquid Chromatography (HPLC)
利用Agilent 1260 infinityII Binary Pump进行溶解度及稳定性测试。Solubility and stability tests were performed using Agilent 1260 infinityII Binary Pump.
实施例1:式(I)所示化合物的制备
Example 1: Preparation of the compound represented by formula (I)
将3-溴-2-氧代环己烷-1-甲酸乙酯(20mg,0.08mmol)和4-氯苯胺(25mg,0.2mmol)混合,然后加热到150℃,反应3小时后将反应液冷却到室温,用100mL二氯甲烷稀释后,用100mL 1N HCl洗涤3次并用饱和100mL NaHCO3洗涤1次,有机层使用无水Na2SO4干燥并真空浓缩,通过硅胶柱层析分离纯化得到6-氯-2,3,4,9-四氢-1H-咔唑-1-甲酸乙酯(16mg)。取10mg 6-氯-2,3,4,9-四氢-1H-咔唑-1-甲酸乙酯(0.036mmol)溶于10mL乙醇中,加入2mL 2M LiOH溶液,室温搅拌反应1小时,旋转蒸馏后加入20mL水稀释,将pH调整至2,然后用50mL二氯甲烷萃取3次,合并有机相,干燥浓缩后加入氨水,加热60℃反应24小时,硅胶柱层析分离纯化获得白色状固体6-氯-2,3,4,9-四氢-1H-咔唑-1-甲酰胺(化合物1,7.6mg),使用Chiralpak AD手性柱分离得到(S)-6-氯-2,3,4,9-四氢-1H-咔唑甲酰胺(式(I)所示化合物)。式(I)所示化合物LCMS[M+H]+:249。1H-NMR(400MHz,DMSO-d6):δ10.79(s,1H),7.37-7.39(m,2H),7.28(d,J=8.0Hz,1H),7.08(s,1H),6.98-7.01(m,1H),3.64-3.67(m,1H),2.58-2.61(m,2H),1.66-2.04(m,4H)。3-Bromo-2-oxocyclohexane-1-carboxylic acid ethyl ester (20 mg, 0.08 mmol) and 4-chloroaniline (25 mg, 0.2 mmol) were mixed and then heated to 150°C. After reacting for 3 hours, the reaction solution was cooled to room temperature, diluted with 100 mL of dichloromethane, washed 3 times with 100 mL of 1N HCl and once with saturated 100 mL of NaHCO 3. The organic layer was dried over anhydrous Na 2 SO 4 and concentrated in vacuo. The product was separated and purified by silica gel column chromatography to obtain 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid ethyl ester (16 mg). 10 mg of 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxylic acid ethyl ester (0.036 mmol) was dissolved in 10 mL of ethanol, and 2 mL of 2M LiOH solution was added. The mixture was stirred at room temperature for 1 hour, and then 20 mL of water was added for dilution after rotary distillation to adjust the pH to 2. The mixture was then extracted 3 times with 50 mL of dichloromethane, and the organic phases were combined, dried and concentrated, and then ammonia water was added. The mixture was heated at 60° C. for 24 hours, and the mixture was separated and purified by silica gel column chromatography to obtain white solid 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide (compound 1, 7.6 mg). The mixture was separated by Chiralpak AD chiral column to obtain (S)-6-chloro-2,3,4,9-tetrahydro-1H-carbazolecarboxamide (compound shown in formula (I)). LCMS [M+H] + of the compound shown in formula (I): 249. 1 H-NMR (400MHz, DMSO-d 6 ): δ10.79(s,1H),7.37-7.39(m,2H),7.28(d,J=8.0Hz,1H),7.08(s,1H),6 .98-7.01(m,1H),3.64-3.67(m,1H),2.58-2.61(m,2H),1.66-2.04(m,4H).
实施例2:药物诱导的角质细胞mRNA甲基化水平变化Example 2: Drug-induced changes in keratinocyte mRNA methylation levels
将1*108HaCat细胞铺种于培养皿中,分别加入50nM的药物(索拉非尼、卡培他滨、多西他赛和奥希替尼),在含有5%CO2的培养箱中37℃培养24小时,弃去培养基后用PBS清洗,离心并弃上清液后加入400μL RLT细胞裂解液(QIAGEN,Cat.#79216)。取部分样品,加入400μL 70%乙醇,搅拌均匀后转移至RNeasy mini柱,使用RNeasy mini试剂盒(QIAGEN,Cat.#74104)提取RNA。取2μL RNA样品溶于98μL 10mM Tris-HCl缓冲液,用Nanodrop(Thermo Fisher Scientific)测量260nm处的吸光度以测定RNA浓度。1*10 8 HaCat cells were plated in a culture dish, and 50 nM drugs (sorafenib, capecitabine, docetaxel and osimertinib) were added respectively. The cells were cultured at 37°C in an incubator containing 5% CO 2 for 24 hours. The culture medium was discarded and washed with PBS. After centrifugation and discarding the supernatant, 400 μL RLT cell lysis buffer (QIAGEN, Cat.#79216) was added. Some samples were taken, 400 μL 70% ethanol was added, stirred evenly, and transferred to RNeasy mini columns. RNA was extracted using RNeasy mini kit (QIAGEN, Cat.#74104). 2 μL RNA samples were dissolved in 98 μL 10 mM Tris-HCl buffer, and the absorbance at 260 nm was measured using Nanodrop (Thermo Fisher Scientific) to determine the RNA concentration.
取40μg RNA样本,用NEBNext Poly(A)mRNA磁性分离模块(NEB,Cat.#E7490)进行mRNA(PolyA+RNA)富集,然后用直接RNA测序试剂盒(Oxfod Nanopore Technologies,Cat.#SQK-RNA002)在上述富集的mRNA(PolyA+RNA)分子的3’端连接反转录接头RTA。以mRNA(PolyA+RNA)分子为模版进行逆转录反应,用以合成其互补链,反转录接头RTA末端连接测序接头(RNA adapter)形成最终测序文库,用QubitTM dsDNA HS assay试剂盒(Invitrogen,Cat.#LOT2133187)对进行定量检测。40 μg RNA sample was taken and enriched with NEBNext Poly(A) mRNA Magnetic Separation Module (NEB, Cat.#E7490), and then the reverse transcription adapter RTA was connected to the 3' end of the enriched mRNA (PolyA+RNA) molecule using the direct RNA sequencing kit (Oxfod Nanopore Technologies, Cat.#SQK-RNA002). The mRNA (PolyA+RNA) molecule was used as a template for reverse transcription reaction to synthesize its complementary chain, and the reverse transcription adapter RTA end was connected to the sequencing adapter (RNA adapter) to form the final sequencing library, and the Qubit TM dsDNA HS assay kit (Invitrogen, Cat.#LOT2133187) was used for quantitative detection.
文库质检后,将准备好的测序文库加载至PromethION Flow Cell芯片(Oxfod Nanopore Technologies,Cat.#FLO-MIN106D),并放入PromenthION测序仪(Oxfod Nanopore Technologies)选择匹配的测序模式进行测序。测序数据通过guppy进行basecalling,以原始fast5数据进行m6A甲基化分析。After library quality inspection, the prepared sequencing library was loaded into the PromethION Flow Cell chip (Oxfod Nanopore Technologies, Cat. #FLO-MIN106D) and placed into the PromenthION sequencer (Oxfod Nanopore Technologies) to select the matching sequencing mode for sequencing. The sequencing data was base called by guppy, and the m6A methylation analysis was performed with the original fast5 data.
结果如图13所示,相对于空白对照组,加入索拉非尼、卡培他滨、多西他赛和奥希替尼后,HaCat细胞的m6A甲基化水平分别升高了5.05倍、6.01倍、3.97倍和5.13倍。这说明抗肿瘤药物(索拉非尼、卡培他滨、多西他赛和奥希替尼)能够诱导人角质细胞mRNA的异常m6A甲基化。进一步的生物信息学分析发现,NAP1L2的m6A甲基化水平存在显著性差异,主要体现在UGAGGACUCA片段的m6A甲基化。The results are shown in Figure 13. Compared with the blank control group, the m6A methylation levels of HaCat cells increased by 5.05 times, 6.01 times, 3.97 times and 5.13 times after adding sorafenib, capecitabine, docetaxel and osimertinib, respectively. This shows that anti-tumor drugs (sorafenib, capecitabine, docetaxel and osimertinib) can induce abnormal m6A methylation of human keratinocyte mRNA. Further bioinformatics analysis found that there was a significant difference in the m6A methylation level of NAP1L2, mainly reflected in the m6A methylation of the UGAGGACUCA fragment.
实施例3:药物诱导的小鼠皮肤不良反应模型中mRNA甲基化水平变化Example 3: Changes in mRNA methylation levels in drug-induced adverse skin reaction models in mice
ICR雄性小鼠(周龄5-6,体重35克左右)进行7天适应性饲养后进行随机分组,每组6只小鼠:空白对照组、索拉非尼组、卡培他滨组、多西他赛组和奥希替尼组。各组别分别灌胃给予相应造模药物(索拉非尼100mg/kg、卡培他滨200mg/kg、多西他赛25mg/kg、奥希替尼10mg/kg),每天一次,连续给药30天后处死,取小鼠后肢足趾皮肤组织。取少量组织样本,放入盛有液氮的研钵中研磨成粉末状,加入单相裂解液,室温放置5分钟后离心(12000rpm)5分钟,取1mL上清液,加入200μL氯仿,震荡混匀后室温放置15分钟,离心(12000rpm,4℃)15分钟,吸取上层水相并加入等体积异丙醇,于-20℃放置1小时后离心(12000rpm,4℃),弃上清。沉淀中加入400μL 70%乙醇,搅拌均匀后转移至RNeasy mini柱,使用RNeasy mini试剂盒(QIAGEN,Cat.#74104)提取RNA。取2μL RNA样品溶于98μL 10mM Tris-HCl缓冲液,用Nanodrop(Thermo Fisher Scientific)测量260nm处的吸光度以测定RNA浓度。ICR male mice (5-6 weeks old, weighing about 35 grams) were randomly divided into groups after 7 days of adaptive feeding, with 6 mice in each group: blank control group, sorafenib group, capecitabine group, docetaxel group and osimertinib group. Each group was given the corresponding modeling drugs (sorafenib 100 mg/kg, capecitabine 200 mg/kg, docetaxel 25 mg/kg, osimertinib 10 mg/kg) by gavage once a day, and the mice were killed after 30 consecutive days of administration, and the skin tissue of the hind limbs and toes of the mice was obtained. Take a small amount of tissue sample, put it into a mortar filled with liquid nitrogen and grind it into powder, add single-phase lysis solution, leave it at room temperature for 5 minutes, centrifuge (12000rpm) for 5 minutes, take 1mL supernatant, add 200μL chloroform, shake and mix, leave it at room temperature for 15 minutes, centrifuge (12000rpm, 4℃) for 15 minutes, aspirate the upper aqueous phase and add an equal volume of isopropanol, leave it at -20℃ for 1 hour, centrifuge (12000rpm, 4℃), and discard the supernatant. Add 400μL 70% ethanol to the precipitate, stir well and transfer it to the RNeasy mini column, and use the RNeasy mini kit (QIAGEN, Cat.#74104) to extract RNA. Take 2μL RNA sample and dissolve it in 98μL 10mM Tris-HCl buffer, and measure the absorbance at 260nm with Nanodrop (Thermo Fisher Scientific) to determine the RNA concentration.
取40μg RNA样本,用NEBNext Poly(A)mRNA磁性分离模块(NEB,Cat.#E7490)进行mRNA(PolyA+RNA)富集,然后用直接RNA测序试剂盒(Oxfod Nanopore Technologies,Cat.#SQK-RNA002)在上述富集的mRNA(PolyA+RNA)分子的3’端连接反转录接头RTA。以mRNA(PolyA+RNA)分子为模版进行逆转录反应,用以合成其互补链,反转录接头RTA末端连接测序接头(RNA adapter)形成最终测序文库,用QubitTM dsDNA HS assay试剂盒(Invitrogen,Cat.#LOT2133187)对进行定量检测。40 μg RNA sample was taken and enriched with NEBNext Poly(A) mRNA Magnetic Separation Module (NEB, Cat.#E7490), and then the reverse transcription adapter RTA was connected to the 3' end of the enriched mRNA (PolyA+RNA) molecule using the direct RNA sequencing kit (Oxfod Nanopore Technologies, Cat.#SQK-RNA002). The mRNA (PolyA+RNA) molecule was used as a template for reverse transcription reaction to synthesize its complementary chain, and the reverse transcription adapter RTA end was connected to the sequencing adapter (RNA adapter) to form the final sequencing library, and the Qubit TM dsDNA HS assay kit (Invitrogen, Cat.#LOT2133187) was used for quantitative detection.
文库质检后,将准备好的测序文库加载至PromethION Flow Cell芯片(Oxfod Nanopore Technologies,Cat.#FLO-MIN106D),并放入PromenthION测序仪(Oxfod Nanopore Technologies)选择匹配的测序模式进行测序。测序数据通过guppy进行basecalling,以原始fast5数据进行m6A甲基化分析。After library quality inspection, the prepared sequencing library was loaded into the PromethION Flow Cell chip (Oxfod Nanopore Technologies, Cat. #FLO-MIN106D) and placed into the PromenthION sequencer (Oxfod Nanopore Technologies) to select the matching sequencing mode for sequencing. The sequencing data was base called by guppy, and the m6A methylation analysis was performed with the original fast5 data.
结果如图14所示,相对于阳性对照组,药物造模组小鼠后肢足趾皮肤组织中m6A甲基化水平显著性升高。加药组NAP1L2的m6A甲基化水平与空白对照组存在显著性差异。The results are shown in Figure 14. Compared with the positive control group, the m6A methylation level in the skin tissue of the hind limbs and toes of mice in the drug modeling group was significantly increased. The m6A methylation level of NAP1L2 in the drug-treated group was significantly different from that in the blank control group.
实施例4:m6A调节NAP1L2的mRNA表达水平Example 4: m6A regulates the mRNA expression level of NAP1L2
将1*108HaCat细胞铺种于培养皿中,分别加入m6A甲基化酶METTL3重组蛋白(Abcam,Cat.#ab271611)、m6A去甲基化酶FTO重组蛋白(Abcam,Cat.#ab271525),或转染METTL3的siRNA(sh-METTL3,吉凯基因)、FTO的siRNA(sh-FTO,吉凯基因),放置于含有5%二氧化碳的培养箱中于37℃培养24小时,用PBS洗涤后,高速离心收集细胞。用Trizol试剂(Sigma Aldrich)提取总RNA,利用cDNA逆转录试剂盒(Transgene Biotech,Cat.#AT311-03)将1μg RNA逆转录成cDNA,加入1.25μL引物(Beyotime,Cat.#QH18721S)、10μL iTag Universal SYBR Green超混合液(Bio-Rad,Cat.#172-5125)和适量的DEPC超纯水配置成20μL反应液,进行RT-PCR反应。反应结束后,将反应液进行琼脂糖凝胶电泳,测定NAP1L2的mRNA表达量。1*10 8 HaCat cells were plated in a culture dish, and m6A methylase METTL3 recombinant protein (Abcam, Cat.#ab271611) and m6A demethylase FTO recombinant protein (Abcam, Cat.#ab271525) were added, or METTL3 siRNA (sh-METTL3, GeneCare) and FTO siRNA (sh-FTO, GeneCare) were transfected, and the cells were placed in an incubator containing 5% carbon dioxide at 37°C for 24 hours. After washing with PBS, the cells were collected by high-speed centrifugation. Total RNA was extracted with Trizol reagent (Sigma Aldrich), and 1 μg RNA was reverse transcribed into cDNA using a cDNA reverse transcription kit (Transgene Biotech, Cat. # AT311-03). 1.25 μL of primers (Beyotime, Cat. # QH18721S), 10 μL of iTag Universal SYBR Green supermix (Bio-Rad, Cat. # 172-5125) and an appropriate amount of DEPC ultrapure water were added to prepare a 20 μL reaction solution for RT-PCR reaction. After the reaction was completed, the reaction solution was subjected to agarose gel electrophoresis to determine the mRNA expression level of NAP1L2.
结果如图15所示,当向角质细胞HaCat中加入m6A甲基化酶METTL3或抑制去m6A甲基化酶FTO的功能(sh-FTO)时,NAP1L2的mRNA表达量显著性上升;当向角质细胞HaCat中加入去m6A甲基化酶FTO或抑制m6A甲基化酶METTL3的功能(sh-METTL3)时,NAP1L2的mRNA表达量显著性下降。这说明m6A甲基化可以调控NAP1L2的mRNA表达量。The results are shown in Figure 15. When m6A methylase METTL3 was added to keratinocytes HaCat or the function of m6A methylase FTO was inhibited (sh-FTO), the mRNA expression of NAP1L2 increased significantly; when m6A methylase FTO was added to keratinocytes HaCat or the function of m6A methylase METTL3 was inhibited (sh-METTL3), the mRNA expression of NAP1L2 decreased significantly. This shows that m6A methylation can regulate the mRNA expression of NAP1L2.
实施例5:NAP1L2调节人角质细胞HaCat中金属基质蛋白的表达Example 5: NAP1L2 regulates the expression of metal matrix proteins in human keratinocytes HaCat
将1*108HaCat细胞铺种于培养皿中,分别加入人重组NAP1L2蛋白(Abcam,Cat.#ab117213)、索拉非尼、卡培他滨、多西他赛和奥希替尼,或转染NAP1L2的siRNA(sh-NAP1L2,吉凯基因),放置于含有5%二氧化碳的培养箱中于37℃培养24小时,用PBS洗涤后,高速离心收集细胞。上述收集的细胞中加入RLT裂解液,4℃下摇动半小时,离心后取上清液,用蛋白印迹法测量金属基质蛋白的表达。1*10 8 HaCat cells were plated in a culture dish, and human recombinant NAP1L2 protein (Abcam, Cat.#ab117213), sorafenib, capecitabine, docetaxel and osimertinib were added, or NAP1L2 siRNA (sh-NAP1L2, GeneCare) was transfected, and the cells were placed in an incubator containing 5% carbon dioxide at 37°C for 24 hours, washed with PBS, and collected by high-speed centrifugation. RLT lysis buffer was added to the collected cells, shaken at 4°C for half an hour, and the supernatant was collected after centrifugation, and the expression of metal matrix protein was measured by Western blotting.
上述收集的细胞用Trizol试剂(Sigma Aldrich)提取总RNA,利用cDNA逆转录试剂盒(Transgene Biotech,Cat.#AT311-03)将1μg RNA逆转录成cDNA,加入1.25μL引物(SinoBiological,Cat.#HP100168&HP100367)、10μL iTag Universal SYBR Green超混合液(Bio-Rad,Cat.#172-5125)和适量的DEPC超纯水配置成20μL反应液,进行RT-PCR反应。反应结束后,将反应液进行琼脂糖凝胶电泳,测定金属基质蛋白的mRNA表达量。The total RNA of the cells collected above was extracted with Trizol reagent (Sigma Aldrich), and 1 μg RNA was reverse transcribed into cDNA using a cDNA reverse transcription kit (Transgene Biotech, Cat. #AT311-03). 1.25 μL primers (Sino Biological, Cat. #HP100168 & HP100367), 10 μL iTag Universal SYBR Green supermix (Bio-Rad, Cat. #172-5125) and an appropriate amount of DEPC ultrapure water were added to prepare a 20 μL reaction solution for RT-PCR reaction. After the reaction, the reaction solution was subjected to agarose gel electrophoresis to determine the mRNA expression of metal matrix protein.
结果如图16所示,当向角质细胞HaCat中加入NAP1L2重组蛋白后,金属基质蛋白酶MMP2和MMP9的mRNA和蛋白的表达量显著性上升;当向角质细胞HaCat中加入NAP1L2的siRNA,抑制NAP1L2的表达时,金属基质蛋白酶MMP2和MMP9的mRNA和蛋白的表达量显著性下降。很多研究已经证实,金属基质蛋白酶的异常表达与多种皮肤相关疾病有着密切的关系(Kumper M.et al.,Am.J.Physiol.Cell.Physiol.2022,323(4):1290-1303)。The results are shown in Figure 16. When NAP1L2 recombinant protein was added to keratinocytes HaCat, the mRNA and protein expression levels of metal matrix proteases MMP2 and MMP9 increased significantly; when NAP1L2 siRNA was added to keratinocytes HaCat to inhibit the expression of NAP1L2, the mRNA and protein expression levels of metal matrix proteases MMP2 and MMP9 decreased significantly. Many studies have confirmed that abnormal expression of metal matrix proteases is closely related to a variety of skin-related diseases (Kumper M. et al., Am. J. Physiol. Cell. Physiol. 2022, 323 (4): 1290-1303).
实施例6:m6A调节人角质细胞分化标志物的表达Example 6: m6A regulates the expression of human keratinocyte differentiation markers
将1*108HaCat细胞铺种于培养皿中,加入重组HBEGF蛋白(Thermo Fisher Scientific,Cat.#100-47-1mg),放置于含有5%二氧化碳的培养箱中于37℃培养24小时,再加入HBEGF抗体(Invitrogen,Cat.#406316)或转染METTL3的siRNA(sh-METTL3,吉凯基因)、NAP1L2的siRNA(sh-NAP1L2,吉凯基因),放置于含有5%二氧化碳的培养箱中于37℃培养24小时,用PBS洗涤后,高速离心收集细胞。上述收集的细胞中加入RLT裂解液,4℃下摇动半小时,离心后取上清液,用蛋白印迹法测量角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的蛋白表达量。1*10 8 HaCat cells were plated in a culture dish, recombinant HBEGF protein (Thermo Fisher Scientific, Cat.#100-47-1mg) was added, and the cells were placed in an incubator containing 5% carbon dioxide at 37°C for 24 hours. HBEGF antibody (Invitrogen, Cat.#406316) or transfected with siRNA of METTL3 (sh-METTL3, Jikai Gene) and siRNA of NAP1L2 (sh-NAP1L2, Jikai Gene) were added, and the cells were placed in an incubator containing 5% carbon dioxide at 37°C for 24 hours. After washing with PBS, the cells were collected by high-speed centrifugation. RLT lysis buffer was added to the above collected cells, shaken at 4°C for half an hour, and the supernatant was taken after centrifugation. The protein expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin were measured by Western blotting.
用Trizol试剂(Sigma Aldrich)提取总RNA,利用cDNA逆转录试剂盒(Transgene Biotech,Cat.#AT311-03)将1μg RNA逆转录成cDNA,加入1.25μL引物(引物序列如表2所示)、10μL iTag Universal SYBR Green超混合液(Bio-Rad,Cat.#172-5125)和适量的DEPC超纯水配置成20μL反应液,进行RT-PCR反应。反应结束后,将反应液进行琼脂糖凝胶电泳,测定角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA表达量。Total RNA was extracted with Trizol reagent (Sigma Aldrich), and 1 μg RNA was reverse transcribed into cDNA using a cDNA reverse transcription kit (Transgene Biotech, Cat. # AT311-03). 1.25 μL of primers (primer sequences are shown in Table 2), 10 μL of iTag Universal SYBR Green supermix (Bio-Rad, Cat. # 172-5125) and an appropriate amount of DEPC ultrapure water were added to prepare a 20 μL reaction solution for RT-PCR reaction. After the reaction, the reaction solution was subjected to agarose gel electrophoresis to determine the mRNA expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin.
结果如图17所示,当向角质细胞HaCat中加入HBEGF重组蛋白后,角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA和蛋白质的表达量显著性升高,这说明角质细胞HaCat处于高度分化状态;但是加入HBEGF抗体或用METTL3、NAP1L2的siRNA抑制细胞内m6A甲基化功能时,角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA和蛋白质的表达量显著性下降。这说明m6A能够调节角质细胞的分化标志物的表达,从而调节角质细胞的分化。The results are shown in Figure 17. When HBEGF recombinant protein was added to keratinocytes HaCat, the expression of mRNA and protein of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin increased significantly, indicating that keratinocytes HaCat were in a highly differentiated state; however, when HBEGF antibody was added or siRNA of METTL3 and NAP1L2 was used to inhibit the intracellular m6A methylation function, the expression of mRNA and protein of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin decreased significantly. This indicates that m6A can regulate the expression of differentiation markers of keratinocytes, thereby regulating the differentiation of keratinocytes.
实施例7:化合物对THP-1细胞m6A甲基化水平的影响Example 7: Effects of compounds on m6A methylation levels in THP-1 cells
将1*108THP-1细胞铺种培养皿中,分别加入4nM和400nM的式(I)化合物,4nM和4μM烟酰胺,以及5μM的m6A甲基化酶抑制剂UZH2,在含有5%CO2的培养箱中于37℃培养24小时,丢弃培养基并用PBS清洗后,离心并弃去上清液,加入400μL RLT细胞裂解缓冲液,于-80℃保存。取部分样品,加入400μL 70%乙醇并搅拌均匀,将700μL样品转移至RNeasy离心柱离心15秒(8000g,25℃),再加入700μL RW1缓冲液并离心15秒(8000g,25℃),而后加入500μL RPE缓冲液并离心16秒(8000g,25℃),重复上述步骤二次后离心2分钟以彻底去除洗脱液。向色谱柱中加入30μL无核酸酶水,孵育5分钟后离心2分钟(12000g,25℃),重复次步骤3次。取2μL RNA样品溶于98μL的10mM Tris缓冲液中,用Nanodrop测量260nm处的吸光度以测定RNA浓度。1*10 8 THP-1 cells were plated in a culture dish, and 4 nM and 400 nM of the compound of formula (I), 4 nM and 4 μM nicotinamide, and 5 μM of m6A methylase inhibitor UZH2 were added, respectively, and cultured at 37°C in an incubator containing 5% CO 2 for 24 hours. The culture medium was discarded and washed with PBS, centrifuged and the supernatant was discarded, 400 μL of RLT cell lysis buffer was added, and stored at -80°C. A portion of the sample was taken, 400 μL of 70% ethanol was added and stirred evenly, 700 μL of the sample was transferred to an RNeasy centrifugal column and centrifuged for 15 seconds (8000g, 25°C), 700 μL of RW1 buffer was added and centrifuged for 15 seconds (8000g, 25°C), and then 500 μL of RPE buffer was added and centrifuged for 16 seconds (8000g, 25°C), and the above steps were repeated twice and centrifuged for 2 minutes to completely remove the eluent. Add 30 μL of nuclease-free water to the column, incubate for 5 minutes, centrifuge for 2 minutes (12000 g, 25°C), and repeat this step 3 times. Take 2 μL of RNA sample and dissolve it in 98 μL of 10 mM Tris buffer, and measure the absorbance at 260 nm with Nanodrop to determine the RNA concentration.
取50μg总RNA溶于100μL无核酸酶水中。重悬Oligo(dT)磁珠,将50μL磁珠转移至1.5mL试管中,加入500μL结合缓冲液,静止并移除上清液。将100μL RNA样品加入到200μL磁珠悬浮液中混合,在Theromixer中于25℃下搅拌并孵育5分钟,弃去上清后加入200μL洗涤缓冲液,重复2次后离心10秒(2000g,25℃)。加入50μL洗脱缓冲液并混合均匀,加热至75℃,转移上清液至新1.5mL试管中,使用RNA Clean&Concentrator kit纯化并测定RNA浓度。Take 50μg of total RNA and dissolve it in 100μL of nuclease-free water. Resuspend Oligo(dT) magnetic beads, transfer 50μL of magnetic beads to a 1.5mL test tube, add 500μL of binding buffer, let stand and remove the supernatant. Add 100μL of RNA sample to 200μL of magnetic bead suspension and mix, stir and incubate at 25℃ in a Theromixer for 5 minutes, discard the supernatant and add 200μL of wash buffer, repeat twice and centrifuge for 10 seconds (2000g, 25℃). Add 50μL of elution buffer and mix well, heat to 75℃, transfer the supernatant to a new 1.5mL test tube, and use RNA Clean&Concentrator kit to purify and measure the RNA concentration.
在每只试管中加入20μL(约200ng)mRNA样品和20μL Nuclease P1消化预混液(0.5μL的2unit/μL Nuclease P1、0.4μL的5M NaCl、2μL的0.1M ZnCl2和17.1μL的PCR级水),在Theromixer中于37℃下搅拌并孵育2小时,加入2μL的2M NH4HCO3溶液和1unit碱性磷酸酶,在Theromixer中于37℃下搅拌并孵育2小时,加入1μL的1.2M HCl中和溶液,离心30分钟(16000g,4℃),取20μL上清液用LC-MS分析m6A甲基化片段,并计算m6A抑制率。Add 20 μL (about 200 ng) of mRNA sample and 20 μL of Nuclease P1 digestion premix (0.5 μL of 2 unit/μL Nuclease P1, 0.4 μL of 5 M NaCl, 2 μL of 0.1 M ZnCl 2 and 17.1 μL of PCR grade water) to each test tube, stir and incubate at 37°C in a Theromixer for 2 hours, add 2 μL of 2M NH 4 HCO 3 solution and 1 unit alkaline phosphatase, stir and incubate at 37°C in a Theromixer for 2 hours, add 1 μL of 1.2 M HCl neutralization solution, centrifuge for 30 minutes (16000g, 4°C), take 20 μL of supernatant to analyze mA methylation fragments by LC-MS, and calculate mA inhibition rate.
m6A抑制率(%)=(测定离子峰面积-空白对照)/(阳性离子峰面积-空白对照)*100m6A inhibition rate (%) = (measured ion peak area - blank control) / (positive ion peak area - blank control) * 100
结果如图18所示,式(I)化合物可以显著性抑制细胞mRNA的m6A甲基化水平,并且呈现浓度依赖性。式(I)化合物在400nM的浓度下,与5μM浓度下的m6A甲基化酶抑制剂UZH2的m6A抑制活性相当。但是烟酰胺无论低浓度(4nM)还是高浓度(4μM)下对细胞mRNA的m6A甲基化水平无抑制作用。As shown in Figure 18, the compound of formula (I) can significantly inhibit the m6A methylation level of cellular mRNA, and it is concentration-dependent. At a concentration of 400nM, the compound of formula (I) has an m6A inhibitory activity comparable to that of the m6A methylase inhibitor UZH2 at a concentration of 5μM. However, nicotinamide has no inhibitory effect on the m6A methylation level of cellular mRNA at either low concentration (4nM) or high concentration (4μM).
实施例8:化合物对于人角质细胞m6A甲基化水平的影响Example 8: Effects of compounds on m6A methylation levels in human keratinocytes
用含10%胎牛血清、100U/mL青霉素和100μg/mL链霉素的DMEM培养基培养HaCat细胞,将培养皿放置于含有5%CO2的培养箱中于37℃培养24小时,对照组1加入等体积的DMSO,对照组A、B、C和D分别加入50nM的索拉非尼、卡培他滨、多西他赛和奥希替尼,样品组A1、A2、B1、B2、C1、C2、D1和D2在加入50nM相应化合物后分别加入400nM的测试化合物或烟酰胺,连续培养24小时,用PBS洗涤后,高速离心收集细胞。用Trizol试剂(Sigma Aldrich)提取总RNA,使用EpiQuik m6A RNA Methylation Quantification试剂盒对样品RNA m6A甲基化进行定量检测,标准曲线所用的阳性对照样品浓度0.01ng/μl、0.02ng/μl、0.05ng/μl、0.1ng/μl、0.2ng/μl和0.5ng/μl,使用酶标仪(Tecan GENios)读取450nm处的吸光值。m6A的定量计算公式如下:HaCat cells were cultured in DMEM medium containing 10% fetal bovine serum, 100U/mL penicillin and 100μg/mL streptomycin, and the culture dishes were placed in an incubator containing 5% CO2 and cultured at 37°C for 24 hours. An equal volume of DMSO was added to control group 1, and 50nM sorafenib, capecitabine, docetaxel and osimertinib were added to control groups A, B, C and D, respectively. After adding 50nM of the corresponding compound, 400nM of the test compound or nicotinamide was added to sample groups A1, A2, B1, B2, C1, C2, D1 and D2, respectively. The cells were cultured continuously for 24 hours, washed with PBS, and collected by high-speed centrifugation. Total RNA was extracted with Trizol reagent (Sigma Aldrich), and the sample RNA m6A methylation was quantitatively detected using the EpiQuik m6A RNA Methylation Quantification Kit. The positive control sample concentrations used in the standard curve were 0.01ng/μl, 0.02ng/μl, 0.05ng/μl, 0.1ng/μl, 0.2ng/μl and 0.5ng/μl, and the absorbance at 450nm was read using a microplate reader (Tecan GENios). The quantitative calculation formula for m6A is as follows:
m6A(ng)=(样品孔吸光值–背景孔吸光值)/标准曲线斜率m6A (ng) = (absorbance of sample well – absorbance of background well) / slope of standard curve
m6A(%)=m6A(ng)/样品RNA量(ng)*100%m6A (%) = m6A (ng) / sample RNA amount (ng) * 100%
结果如表1所示,用索拉非尼、卡培他滨、多西他赛和奥希替尼处理后可以导致人角质细胞HaCat的m6A甲基化水平显著性上升(如表1所示)。式(I)化合物能有效抑制由于化疗药物和多激酶抑制剂所引起的人角质细胞的RNA m6A水平的异常升高。The results are shown in Table 1. Treatment with sorafenib, capecitabine, docetaxel and osimertinib can lead to a significant increase in the m6A methylation level of human keratinocytes HaCat (as shown in Table 1). The compound of formula (I) can effectively inhibit the abnormal increase of RNA m6A level in human keratinocytes caused by chemotherapeutic drugs and multikinase inhibitors.
表1相对于对照组1的m6A甲基化水平变化倍数,具体计算方法为:变化倍数=测定m6A的量/对照1测定的m6A的量。
Table 1 shows the fold change of m6A methylation level relative to control group 1. The specific calculation method is: fold change = measured m6A amount / measured m6A amount in control 1.
实施例9:化合物对于角质细胞HaCaT分化的抑制作用Example 9: Inhibitory effect of compounds on keratinocyte HaCaT differentiation
用含10%胎牛血清、100U/mL青霉素和100μg/mL链霉素的DMEM培养基培养人角质细胞HaCaT,按2*106个细胞每平方厘米的密度将细胞铺种于96孔板内,并放置于含有5%二氧化碳的培养箱中于37℃培养24小时,对照孔1加入等体积的DMSO,对照孔2加入2.5ng/mL人重组HBEGF蛋白(Abcam,ab205523),样品孔加入2.5ng/mL人重组HBEGF蛋白和相应浓度的测试化合物,连续培养24小时,用PBS洗涤后,高速离心收集细胞。用Trizol试剂(Sigma Aldrich)提取总RNA,利用cDNA逆转录试剂盒(Transgene Biotech,AT311-03)将1μg RNA逆转录成cDNA,加入1.25μL引物(引物序列请见表2)、10μL iTag Universal SYBR Green超混合液(Bio-Rad,172-5125)和适量的DEPC超纯水配置成20μL反应液,进行RT-PCR反应。反应结束后,将反应液进行琼脂糖凝胶电泳,测定角质细胞分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA表达量。Human keratinocytes HaCaT were cultured in DMEM medium containing 10% fetal bovine serum, 100 U/mL penicillin and 100 μg/mL streptomycin. The cells were plated in a 96-well plate at a density of 2*10 6 cells per square centimeter and cultured at 37°C in an incubator containing 5% carbon dioxide for 24 hours. An equal volume of DMSO was added to control well 1, 2.5 ng/mL human recombinant HBEGF protein (Abcam, ab205523) was added to control well 2, and 2.5 ng/mL human recombinant HBEGF protein and the corresponding concentration of the test compound were added to the sample wells. The plates were cultured continuously for 24 hours, washed with PBS, and the cells were collected by high-speed centrifugation. Total RNA was extracted with Trizol reagent (Sigma Aldrich), and 1 μg RNA was reverse transcribed into cDNA using a cDNA reverse transcription kit (Transgene Biotech, AT311-03). 1.25 μL of primers (primer sequences are shown in Table 2), 10 μL of iTag Universal SYBR Green supermix (Bio-Rad, 172-5125) and an appropriate amount of DEPC ultrapure water were added to prepare a 20 μL reaction solution for RT-PCR reaction. After the reaction, the reaction solution was subjected to agarose gel electrophoresis to determine the mRNA expression levels of keratinocyte differentiation markers KRT1, KRT10, Loricrin and Involucrin.
表2部分引物序列信息
Table 2 Some primer sequence information
如图19所示,当加入人重组HBEGF蛋白进行诱导后,HaCaT的分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA表达量显著性上升。但是加入式(I)化合物后,HaCaT的分化标志物KRT1、KRT10、Loricrin和Involucrin的mRNA表达量显著性被抑制。As shown in Figure 19, after adding human recombinant HBEGF protein for induction, the mRNA expression levels of HaCaT differentiation markers KRT1, KRT10, Loricrin and Involucrin increased significantly. However, after adding the compound of formula (I), the mRNA expression levels of HaCaT differentiation markers KRT1, KRT10, Loricrin and Involucrin were significantly inhibited.
实施例10:化合物在大鼠手足皮肤反应模型中对于角质细胞分化的抑制作用Example 10: Inhibitory effect of compounds on keratinocyte differentiation in rat hand-foot skin reaction model
将SD大鼠(体重约为200g)饲养适应一周后,按照体重平均分组,每组12只大鼠。将造模药物(索拉非尼、厄洛替尼、阿法替尼和奥希替尼)分别溶解在含有5%DMSO、45%PEG400和50%H2O的溶液中,并将造模药物定容至所需浓度,按表3所示的剂量每天灌胃给药一次。灌胃给药1小时后,将大鼠左侧足爪均匀涂抹0.05g含有不同质量比例的测试化合物的软膏,而右侧足爪作为自身对照涂抹空白基质软膏,空白对照组的大鼠不涂药。涂药后继续固定四肢2小时,然后用清水擦去残留药物,解除固定并恢复自由行动。造模药物、空白基质软膏和测试化合物软膏均为一天给药一次,连续给药30天后,将大鼠安乐死,取爪足跖皮肤组织,将其固定在10%中性甲醛中并切成5μm切片,脱水后包埋在石蜡中。测试化合物所用的软膏由化合物、白蜂蜡、白凡士林和轻质液体石蜡按照一定的比例(3种软膏重量比分别为:1:18:58:23、3:18:57:22、10:20:40:30)混合制备而成。空白基质软膏由白蜂蜡、白凡士林和轻质液体石蜡按照一定的比例(重量比:18:60:22)混合制备而成。After SD rats (weighing about 200 g) were bred and adapted for one week, they were divided into groups according to their weight, with 12 rats in each group. The modeling drugs (sorafenib, erlotinib, afatinib and osimertinib) were dissolved in solutions containing 5% DMSO, 45% PEG400 and 50% H 2 O, respectively, and the modeling drugs were fixed to the required concentrations and administered by gavage once a day according to the doses shown in Table 3. One hour after gavage, 0.05 g of ointment containing different mass ratios of the test compound was evenly applied to the left paw of the rat, while the right paw was applied with a blank matrix ointment as a self-control, and the rats in the blank control group were not applied with the drug. After applying the drug, the limbs were fixed for 2 hours, and then the residual drug was wiped off with clean water, the fixation was released and free movement was restored. The modeling drug, blank matrix ointment and test compound ointment were all administered once a day. After continuous administration for 30 days, the rats were euthanized, and the paw plantar skin tissue was taken, fixed in 10% neutral formaldehyde and cut into 5 μm slices, and embedded in paraffin after dehydration. The ointment used for the test compound was prepared by mixing the compound, white beeswax, white vaseline and light liquid paraffin in a certain ratio (the weight ratio of the three ointments was: 1:18:58:23, 3:18:57:22, 10:20:40:30). The blank matrix ointment was prepared by mixing white beeswax, white vaseline and light liquid paraffin in a certain ratio (weight ratio: 18:60:22).
组织染色:在上述大鼠的爪足跖皮肤组织切片脱蜡并再水化后,在苏木素(Hematoxylin)溶液中染色数分钟,清洗后放置于1%酸性酒精中浸泡至切片褪色至淡蓝红色,流水清洗5分钟后用伊红(Eosin)染色2-3分钟,清洗去除多余染料,脱水后加入二甲苯透明数分钟,用中性树脂封固,在光学显微镜下观察角质层,使用Dmetrix软件测量表皮角质层厚度。Tissue staining: After dewaxing and rehydration of the paw plantar skin tissue sections of the above rats, stain them in hematoxylin solution for several minutes, wash them and soak them in 1% acidic alcohol until the sections fade to light blue-red, wash them in running water for 5 minutes and then stain them with eosin for 2-3 minutes, wash and remove excess dye, add xylene for transparent for several minutes after dehydration, seal them with neutral resin, observe the stratum corneum under an optical microscope, and measure the thickness of the epidermal stratum corneum using Dmetrix software.
免疫组织化学染色:上述大鼠的爪足跖皮肤组织切片脱蜡和水化后,在室温下用3%H2O2孵育30分钟,在进行抗原修复后用10%山羊血清封闭30分钟,滴加KRT1抗体(Abcam,ab93652)和Loricrin抗体(Abcam,ab183646),4℃孵育过夜,加入HRP二抗(ZSGB-BIO,PV-6001)和DAB试剂盒(ZSG-BIO,ZLI9017)显色,在苏木素中复染,清洗后用中心树脂封固,在光学显微镜下观察KRT1和Loricrin的表达量。Immunohistochemical staining: After dewaxing and hydration, the paw plantar skin tissue sections of the above rats were incubated with 3% H2O2 at room temperature for 30 minutes, blocked with 10% goat serum for 30 minutes after antigen retrieval, KRT1 antibody (Abcam, ab93652) and Loricrin antibody (Abcam, ab183646) were added dropwise, incubated overnight at 4°C, HRP secondary antibody (ZSGB-BIO, PV-6001) and DAB kit (ZSG-BIO, ZLI9017) were added for color development, counterstained with hematoxylin, washed and sealed with central resin, and the expression levels of KRT1 and Loricrin were observed under an optical microscope.
如上所述大鼠模型造模成功的判定标准为:(i)足爪部位出现红斑、肿胀、脱屑、溃疡或水疱等症状;和/或(ii)组织染色中角质层厚度显著性高于正常大鼠;和/或(iii)KRT1、KRT5和Loricrin等标志物显著性升高。发病率计算方式为每组中满足上述造模成功的判定标准的动物比例,即发病率=(造模成功大鼠数量/该组大鼠总数)*100%。The criteria for successful modeling of the rat model as described above are: (i) symptoms such as erythema, swelling, desquamation, ulcers or blisters appear in the paws; and/or (ii) the thickness of the stratum corneum in tissue staining is significantly higher than that of normal rats; and/or (iii) markers such as KRT1, KRT5 and Loricrin are significantly increased. The incidence rate is calculated as the proportion of animals in each group that meet the above criteria for successful modeling, that is, the incidence rate = (number of rats with successful modeling/total number of rats in the group) * 100%.
如上所述大鼠的组织染色病理打分标准为:无水泡,计0分,;水泡个数在1-3个,计1分;水泡个数在4-6个,计2分;水泡个数在7-9个,记3分;水泡个数大于10个,计4分。炎症区域占切片总面积小于10%,计0分;炎症区域占切片总面积在10-25%,计1分;炎症区域占切片总面积在25-50%,计2分;炎症区域占切片总面积在50-75%,计3分;炎症区域占切片总面积在75%以上,计4分。充血区域占切片总面积小于10%,计0分;充血区域占切片总面积在10-25%,计1分;充血区域占切片总面积在25-50%,计2分;充血区域占切片总面积在50-75%,计3分;充血区域占切片总面积在75%以上,计4分。打分采用双盲打分制,各组数据统计完毕后,以Mean+SEM形式呈现(N=12)。As mentioned above, the scoring criteria for rat tissue staining pathology are: no blisters, 0 points; 1-3 blisters, 1 point; 4-6 blisters, 2 points; 7-9 blisters, 3 points; more than 10 blisters, 4 points. The inflammation area accounts for less than 10% of the total area of the slice, 0 points; the inflammation area accounts for 10-25% of the total area of the slice, 1 point; the inflammation area accounts for 25-50% of the total area of the slice, 2 points; the inflammation area accounts for 50-75% of the total area of the slice, 3 points; the inflammation area accounts for more than 75% of the total area of the slice, 4 points. If the congestion area accounts for less than 10% of the total area of the slice, 0 points are given; if the congestion area accounts for 10-25% of the total area of the slice, 1 point is given; if the congestion area accounts for 25-50% of the total area of the slice, 2 points are given; if the congestion area accounts for 50-75% of the total area of the slice, 3 points are given; if the congestion area accounts for more than 75% of the total area of the slice, 4 points are given. The scoring system was double-blind, and after the statistics of each group were completed, the data were presented in the form of Mean+SEM (N=12).
表3大鼠模型中的药物使用剂量以及实验结果
Table 3 Drug dosage and experimental results in rat model
如表3所示,索拉非尼、厄洛替尼、阿法替尼和奥希替尼分别以100mg/kg、70mg/kg、50mg/kg和60mg/kg的剂量,在SD大鼠中一天一次灌胃给药,手足皮肤反应造模成功率分别为75%、83.3%、66.7%和75%。式(I)化合物在低剂量下(例如化合物的质量含量为1%),能够显著地降低涂药部位的手足皮肤反应发病率。式(I)化合物在高质量含量下(例如化合物的质量含量为3%和10%),能够显著地降低大鼠所有足爪的手足皮肤反应发病率。As shown in Table 3, sorafenib, erlotinib, afatinib and osimertinib were administered orally once a day in SD rats at a dose of 100 mg/kg, 70 mg/kg, 50 mg/kg and 60 mg/kg, respectively, and the success rates of hand-foot skin reaction modeling were 75%, 83.3%, 66.7% and 75%, respectively. The compound of formula (I) can significantly reduce the incidence of hand-foot skin reaction at the application site at a low dose (for example, the mass content of the compound is 1%). The compound of formula (I) can significantly reduce the incidence of hand-foot skin reaction in all paws of rats at a high mass content (for example, the mass content of the compound is 3% and 10%).
如图20所示的角质层厚度测量结果,在使用索拉非尼、厄洛替尼、阿法替尼和奥希替尼造模成功的大鼠中,其爪足跖皮肤角质层厚度显著地高于正常大鼠。式(I)化合物可以有效地降低造模大鼠的爪足跖皮肤角质层厚度。The results of stratum corneum thickness measurement shown in Figure 20 show that the stratum corneum thickness of the paw and plantar skin of rats successfully modeled with sorafenib, erlotinib, afatinib and osimertinib was significantly higher than that of normal rats. The compound of formula (I) can effectively reduce the stratum corneum thickness of the paw and plantar skin of modeled rats.
如图21所示的组织染色结果,造模药物所导致的皮肤毒性可以在大鼠爪足跖皮下和表皮内形成水泡,真皮层出现炎性细胞浸润,皮肤组织出现充血症状。而式(I)化合物可以有效改善上述造模药物所导致的皮下和表皮内水泡的形成,抑制真皮层的炎性细胞浸润,显著性改善皮肤充血现象。As shown in the tissue staining results in Figure 21, the skin toxicity caused by the modeling drugs can form blisters in the subcutaneous and epidermal areas of the rat paws and feet, inflammatory cell infiltration in the dermis, and congestion symptoms in the skin tissue. The compound of formula (I) can effectively improve the formation of subcutaneous and epidermal blisters caused by the above-mentioned modeling drugs, inhibit the infiltration of inflammatory cells in the dermis, and significantly improve the skin congestion phenomenon.
如图22所示的病理打分结果,造模药物可以导致大鼠爪足跖部位皮下和表皮内形成水泡,真皮层出现炎性细胞浸润,皮肤组织出现充血症状。式(I)化合物可以有效改善上述造模药物所导致的皮下和表皮内水泡的形成,抑制真皮层的炎性细胞浸润,显著性改善皮肤充血现象。As shown in the pathological scoring results in Figure 22, the modeling drugs can cause the formation of blisters in the subcutaneous and epidermal areas of the rat paws, inflammatory cell infiltration in the dermis, and congestion symptoms in the skin tissue. The compound of formula (I) can effectively improve the formation of subcutaneous and epidermal blisters caused by the above-mentioned modeling drugs, inhibit the infiltration of inflammatory cells in the dermis, and significantly improve the skin congestion phenomenon.
免疫组织化学染色结果也显示在用索拉非尼、厄洛替尼、阿法替尼和奥希替尼造模成功的大鼠中,KRT1和Loricrin在组织中明显增多。但是随着化合物的加入,KRT1和Loricrin在组织中明显减少。综上所述,式(I)化合物能够在体外和体内有效的抑制角质细胞的分化,具有治疗角化过度相关疾病的潜力。The results of immunohistochemical staining also showed that in rats successfully modeled with sorafenib, erlotinib, afatinib and osimertinib, KRT1 and Loricrin were significantly increased in tissues. However, with the addition of the compound, KRT1 and Loricrin were significantly reduced in tissues. In summary, the compound of formula (I) can effectively inhibit the differentiation of keratinocytes in vitro and in vivo, and has the potential to treat diseases related to hyperkeratosis.
实施例11:式(I)化合物在化疗药物诱导的小鼠手足综合征模型中的作用Example 11: Effect of the compound of formula (I) in the mouse hand-foot syndrome model induced by chemotherapy drugs
SPF级ICR小鼠(雄性,5-6周龄,体重35克左右)经过7天适应性饲养后进行随机分组:空白对照组(6只)、卡培他滨造模组(6只)、多西他赛造模组(6只)、卡培他滨+式(I)化合物组(6只)、多西他赛+式(I)化合物组(6只)、卡培他滨+烟酰胺组(6只)和多西他赛+烟酰胺组(6只)。各组别分别口服灌胃给予相应造模药物(卡培他滨200mg/kg、多西他赛25mg/kg),每天一次;空白对照组给予等体积生理盐水。化疗药物给药2周后,各组别分别局部涂抹相应的实施例10中使用的式(I)化合物软膏(化合物含量3%)或口服给予烟酰胺(100mg/kg),每天一次,连续给药16天。SPF ICR mice (male, 5-6 weeks old, weighing about 35 grams) were randomly divided into blank control group (6 mice), capecitabine modeling group (6 mice), docetaxel modeling group (6 mice), capecitabine + compound of formula (I) group (6 mice), docetaxel + compound of formula (I) group (6 mice), capecitabine + nicotinamide group (6 mice) and docetaxel + nicotinamide group (6 mice). Each group was given the corresponding modeling drug (capecitabine 200 mg/kg, docetaxel 25 mg/kg) by oral gavage once a day; the blank control group was given an equal volume of normal saline. After 2 weeks of chemotherapy drug administration, each group was topically applied with the corresponding ointment of the compound of formula (I) used in Example 10 (compound content 3%) or orally administered with nicotinamide (100 mg/kg) once a day for 16 consecutive days.
足趾肿胀程度测量:造模药物给药前、造模药物给药2周后以及处死前使用足趾肿胀测试仪(KW-7C,南京卡尔文生物科技有限公司)分别测量小鼠后肢足趾肿胀程度,给药前、给药2周后和处死前的测量前都在小鼠足后脚关节处标记同一位置,测量时水刚好与标记位置处于同一水平线上,数值稳定后记录。Measurement of toe swelling: A toe swelling tester (KW-7C, Nanjing Calvin Biotechnology Co., Ltd.) was used to measure the swelling of the toes of the hind limbs of mice before administration of modeling drugs, 2 weeks after administration of modeling drugs, and before sacrifice. The same position was marked on the joint of the hind foot of the mice before administration, 2 weeks after administration, and before sacrifice. During measurement, the water was just on the same horizontal line as the marked position, and the value was recorded after it stabilized.
皮肤组织病理染色:取小鼠后肢足趾皮肤组织样本,置于4%多聚甲醛常温固定4小时,取出组织流水冲洗数小时,经70%、80%和90%乙醇溶液脱水处理后再用纯酒精和二甲苯等量混合溶液处理15分钟,使用二甲苯溶液透化两次,每次15分钟,至样品透明为止。放入二甲苯和石蜡各半的混合物浸泡15分钟,再加入石蜡I和石蜡II透蜡各一小时。石蜡包埋后,将样品切片、烤片、脱蜡和水化,然后将水化后的切片放入苏木素溶液(中杉金桥,货号23041001)中染色3分钟,加入盐酸乙醇分化液分化15秒,水洗后加入Scott蓝化液(Servicebio,货号20230801)返蓝15秒,流水冲洗后用伊红染液(Solarbio,货号33535)染色3分钟,流水冲洗后脱水、透明、封片并镜检。Skin tissue pathological staining: Take skin tissue samples of the hind limbs of mice, fix them in 4% paraformaldehyde at room temperature for 4 hours, take out the tissue and rinse it with running water for several hours, dehydrate it with 70%, 80% and 90% ethanol solutions, and then treat it with a mixed solution of pure alcohol and xylene in equal amounts for 15 minutes, and permeabilize it with xylene solution twice, 15 minutes each time, until the sample is transparent. Soak it in a mixture of half xylene and half paraffin for 15 minutes, and then add paraffin I and paraffin II for permeabilization for one hour each. After paraffin embedding, the samples were sliced, baked, dewaxed and hydrated, and then the hydrated sections were placed in hematoxylin solution (Zhongshan Jinqiao, catalog number 23041001) for staining for 3 minutes, and then added with hydrochloric acid ethanol differentiation solution for differentiation for 15 seconds. After washing with water, Scott blueing solution (Servicebio, catalog number 20230801) was added to return to blue for 15 seconds. After rinsing with running water, the sections were stained with eosin staining solution (Solarbio, catalog number 33535) for 3 minutes. After rinsing with running water, the sections were dehydrated, transparent, sealed and examined under a microscope.
免疫组化染色:小鼠后肢足趾皮肤组织石蜡切片经烤片、脱蜡和水化后,用0.2M柠檬酸缓冲液(柠檬酸1.534g,柠檬酸钠3.1g,100mL蒸馏水,pH 4.7)进行抗原修复。经3%双氧水(山东安捷高科消毒科技有限公司,货号20290902)去内源性过氧化氢,室温孵育10分钟后用PBS缓冲液(NaCl 8g,KCl 0.2g,Na2HPO41.44g,1M HCl,pH 7.4)充分淋洗。用0.5%Triron-X-100(艾美捷科技,货号A-CSH436-100mL)通透,鼠抗IL-1β和兔IL-8各通透10分钟,兔抗IL-6不通透。5%BSA抗原封闭后,每张玻片滴加1/150稀释的鼠抗IL-1β(Affinity Biosciences,货号BF8021)、1/200稀释的兔抗IL-8(Affinity Biosciences,货号DF6998)或1/150稀释的兔抗IL-6(Affinity Biosciences,货号DF6087),放置于湿盒中4℃孵育过夜。取出孵育过夜的湿盒,室温静置45分钟,用PBS缓冲液浸洗玻片3次,每次15分钟,兔抗IL-8和和兔抗IL-6指标滴加1/100稀释的辣根酶标记山羊抗兔IgG(H+L)(中杉金桥,货号234750811),鼠抗IL-1β指标滴加1/100稀释的辣根酶标记山羊抗小鼠IgG(H+L)(中杉金桥,货号226700804),37℃孵育30分钟而后用PBS缓冲液充分淋洗。加入DAB(CWBIO,货号13723)显色3-5分钟,PBS缓冲液清洗1分钟,苏木精(中杉金桥,货号23041001)复染3分钟,盐酸酒精分化后返蓝,用水洗涤。切片依次放入80%酒精、95%酒精、无水乙醇、无水乙醇II快速脱水,二甲苯I和二甲苯II透明,中性树脂胶(Solarbio,货号20230725)封片并镜检。Immunohistochemical staining: After baking, dewaxing and hydration, paraffin sections of mouse hind limb skin tissue were used for antigen repair with 0.2M citric acid buffer (1.534g citric acid, 3.1g sodium citrate, 100mL distilled water, pH 4.7). Endogenous hydrogen peroxide was removed by 3% hydrogen peroxide (Shandong Anjie High-Tech Disinfection Technology Co., Ltd., item number 20290902), incubated at room temperature for 10 minutes, and then fully rinsed with PBS buffer (NaCl 8g, KCl 0.2g, Na 2 HPO 4 1.44g, 1M HCl, pH 7.4). 0.5% Triron-X-100 (Aimejie Technology, item number A-CSH436-100mL) was used for permeabilization, mouse anti-IL-1β and rabbit IL-8 were permeabilized for 10 minutes each, and rabbit anti-IL-6 was not permeabilized. After 5% BSA antigen blocking, 1/150 diluted mouse anti-IL-1β (Affinity Biosciences, Catalog No. BF8021), 1/200 diluted rabbit anti-IL-8 (Affinity Biosciences, Catalog No. DF6998) or 1/150 diluted rabbit anti-IL-6 (Affinity Biosciences, Catalog No. DF6087) was added to each slide and incubated in a humidified box at 4°C overnight. Take out the wet box incubated overnight, let it stand at room temperature for 45 minutes, wash the slides with PBS buffer 3 times, 15 minutes each time, add 1/100 diluted horseradish enzyme-labeled goat anti-rabbit IgG (H+L) (Zhongshan Jinqiao, catalog number 234750811) to rabbit anti-IL-8 and rabbit anti-IL-6 indicators, add 1/100 diluted horseradish enzyme-labeled goat anti-mouse IgG (H+L) (Zhongshan Jinqiao, catalog number 226700804) to mouse anti-IL-1β indicators, incubate at 37°C for 30 minutes and then rinse thoroughly with PBS buffer. Add DAB (CWBIO, catalog number 13723) for color development for 3-5 minutes, wash with PBS buffer for 1 minute, counterstain with hematoxylin (Zhongshan Jinqiao, catalog number 23041001) for 3 minutes, differentiate with hydrochloric acid alcohol to turn blue, and wash with water. The sections were placed in 80% alcohol, 95% alcohol, anhydrous ethanol, and anhydrous ethanol II in sequence for rapid dehydration. Xylene I and xylene II were transparent. The sections were sealed with neutral resin glue (Solarbio, product number 20230725) and examined under a microscope.
小鼠皮肤外观结果如图23所示,用卡培他滨和多西他赛造模14天后,小鼠后肢足趾皮肤出现明显病变。与正常对照组相比,卡培他滨组和多西他赛组小鼠后肢足趾皮肤出现明显红肿、皲裂和水疱。The results of mouse skin appearance are shown in Figure 23. After 14 days of modeling with capecitabine and docetaxel, obvious lesions appeared on the skin of the hind limbs and toes of mice. Compared with the normal control group, the skin of the hind limbs and toes of mice in the capecitabine group and docetaxel group showed obvious redness, swelling, cracking and blisters.
小鼠后肢足趾肿胀程度如图24所示,造模药物卡培他滨和多西他赛在连续口服14天之后会导致小鼠后肢足趾肿胀。在小鼠后肢足趾局部涂抹式(I)化合物软膏可以显著改善由于造模药物所导致的足趾肿胀(p<0.05)。但是口服100mg/kg烟酰胺对于小鼠后肢足趾的肿胀未观察到明显改善。The degree of swelling of the hind limb toes of mice is shown in Figure 24. The modeling drugs capecitabine and docetaxel can cause swelling of the hind limb toes of mice after continuous oral administration for 14 days. Local application of the ointment of the compound of formula (I) on the hind limb toes of mice can significantly improve the swelling of the toes caused by the modeling drugs (p<0.05). However, no significant improvement was observed in the swelling of the hind limb toes of mice after oral administration of 100 mg/kg nicotinamide.
足趾皮肤组织病理染色结果如图25所示,与正常对照组相比,造模药物卡培他滨和多西他赛在连续口服14天之后会导致小鼠后肢足趾皮肤组织中表皮层和角质层显著增厚,基底层颗粒细胞增多,可见炎性细胞浸润。在小鼠后肢足趾局部涂抹式(I)化合物软膏可以有效的改善皮肤组织表皮层和角质层的增厚现象,基底层细胞形态恢复正常,未见炎性细胞浸润。但是口服100mg/kg烟酰胺对于小鼠后肢足趾皮肤组织的表皮层和角质层的增厚有轻微改善,基底层颗粒细胞略多,仍见炎性细胞浸润。The results of pathological staining of the toe skin tissue are shown in Figure 25. Compared with the normal control group, the modeling drugs capecitabine and docetaxel can cause the epidermis and stratum corneum in the skin tissue of the hind limbs of mice to increase significantly after continuous oral administration for 14 days, increase the number of granular cells in the basal layer, and visible inflammatory cell infiltration. The ointment of the compound of formula (I) applied locally to the hind limbs of mice can effectively improve the thickening of the epidermis and stratum corneum of the skin tissue, and the morphology of the basal layer cells returns to normal, and no inflammatory cell infiltration is seen. However, oral administration of 100 mg/kg nicotinamide has a slight improvement in the thickening of the epidermis and stratum corneum of the skin tissue of the hind limbs of mice, with slightly more granular cells in the basal layer, and inflammatory cell infiltration is still seen.
卡培他滨造模系列组别的免疫组化结果如图26所示,与正常对照组相比,造模药物卡培他滨在连续口服14天之后导致小鼠后肢足趾皮肤组织中细胞因子IL-8显著性上升(p<0.05)。这说明口服卡培他滨会导致小鼠出现皮肤炎症,与临床试验观察结果相符。小鼠后肢足趾局部涂抹式(I)化合物软膏可以显著性降低小鼠后肢足趾皮肤组织中细胞因子IL-8的表达水平(p<0.05)。但是口服100mg/kg烟酰胺对于小鼠后肢足趾皮肤组织中细胞因子IL-8的表达水平没有显著性影响。The immunohistochemical results of the capecitabine modeling series are shown in Figure 26. Compared with the normal control group, the modeling drug capecitabine caused a significant increase in the cytokine IL-8 in the skin tissue of the hind limbs and toes of mice after continuous oral administration for 14 days (p<0.05). This shows that oral administration of capecitabine can cause skin inflammation in mice, which is consistent with the results of clinical trial observations. Local application of the compound ointment of formula (I) on the hind limbs and toes of mice can significantly reduce the expression level of the cytokine IL-8 in the skin tissue of the hind limbs and toes of mice (p<0.05). However, oral administration of 100 mg/kg nicotinamide has no significant effect on the expression level of the cytokine IL-8 in the skin tissue of the hind limbs and toes of mice.
多西他赛造模系列组别的免疫组化结果如图27所示,与正常对照组相比,造模药物多西他赛在连续口服14天之后导致小鼠后肢足趾皮肤组织中细胞因子IL-6显著性上升(p<0.05)。这说明口服多西他赛会导致小鼠出现皮肤炎症,与临床试验观察结果相符。小鼠后肢足趾局部涂抹式(I)化合物软膏可以显著性降低小鼠后肢足趾皮肤组织中细胞因子IL-6的表达水平(p<0.05)。但是口服100mg/kg烟酰胺对于小鼠后肢足趾皮肤组织中细胞因子IL-6的表达水平没有显著性影响。The immunohistochemical results of the docetaxel modeling series are shown in Figure 27. Compared with the normal control group, the modeling drug docetaxel caused a significant increase in the cytokine IL-6 in the skin tissue of the hind limbs and toes of mice after continuous oral administration for 14 days (p<0.05). This shows that oral administration of docetaxel can cause skin inflammation in mice, which is consistent with the results of clinical trial observations. Local application of the compound ointment of formula (I) on the hind limbs and toes of mice can significantly reduce the expression level of cytokine IL-6 in the skin tissue of the hind limbs and toes of mice (p<0.05). However, oral administration of 100 mg/kg nicotinamide has no significant effect on the expression level of cytokine IL-6 in the skin tissue of the hind limbs and toes of mice.
实施例12:式(I)化合物在激酶抑制剂诱导的小鼠手足皮肤反应模型中的作用Example 12: Effect of the compound of formula (I) in the kinase inhibitor-induced mouse hand-foot skin reaction model
SPF级ICR小鼠(雄性,5-6周龄,体重35克左右)经过7天适应性饲养后进行随机分组:空白对照组(6只)、索拉非尼造模组(6只)、奥希替尼造模组(6只)、索拉非尼+式(I)化合物组(6只)、奥希替尼+式(I)化合物组(6只)、索拉非尼+烟酰胺组(6只)和奥希替尼+烟酰胺组(6只)。各组别分别口服灌胃给予相应造模药物(索拉非尼100mg/kg、奥希替尼10mg/kg),每天一次;空白对照组给予等体积生理盐水。化疗药物给药2周后,各组别分别局部涂抹相应的实施例10中使用的式(I)化合物软膏(化合物含量3%)或口服给予烟酰胺(100mg/kg),每天一次,连续给药16天。SPF ICR mice (male, 5-6 weeks old, weighing about 35 grams) were randomly divided into blank control group (6 mice), sorafenib modeling group (6 mice), osimertinib modeling group (6 mice), sorafenib + formula (I) compound group (6 mice), osimertinib + formula (I) compound group (6 mice), sorafenib + nicotinamide group (6 mice) and osimertinib + nicotinamide group (6 mice). Each group was given the corresponding modeling drug (sorafenib 100 mg/kg, osimertinib 10 mg/kg) by oral gavage once a day; the blank control group was given an equal volume of normal saline. After 2 weeks of chemotherapy drug administration, each group was topically applied with the corresponding ointment of the compound of formula (I) used in Example 10 (compound content 3%) or orally administered with nicotinamide (100 mg/kg) once a day for 16 consecutive days.
足趾肿胀程度测量:造模药物给药前、造模药物给药2周后以及处死前使用足趾肿胀测试仪(KW-7C,南京卡尔文生物科技有限公司)分别测量小鼠后肢足趾肿胀程度,给药前、给药2周后和处死前的测量前都在小鼠足后脚关节处标记同一位置,测量时水刚好与标记位置处于同一水平线上,数值稳定后记录。Measurement of toe swelling: A toe swelling tester (KW-7C, Nanjing Calvin Biotechnology Co., Ltd.) was used to measure the swelling of the toes of the hind limbs of mice before administration of modeling drugs, 2 weeks after administration of modeling drugs, and before sacrifice. The same position was marked on the joint of the hind foot of the mice before administration, 2 weeks after administration, and before sacrifice. During measurement, the water was just on the same horizontal line as the marked position, and the value was recorded after it stabilized.
皮肤组织病理染色:取小鼠后肢足趾皮肤组织样本,置于4%多聚甲醛常温固定4小时,取出组织流水冲洗数小时,经70%、80%和90%乙醇溶液脱水处理后再用纯酒精和二甲苯等量混合溶液处理15分钟,使用二甲苯溶液透化两次,每次15分钟,至样品透明为止。放入二甲苯和石蜡各半的混合物浸泡15分钟,再加入石蜡I和石蜡II透蜡各一小时。石蜡包埋后,将样品切片、烤片、脱蜡和水化,然后将水化后的切片放入苏木素溶液(中杉金桥,货号23041001)中染色3分钟,加入盐酸乙醇分化液分化15秒,水洗后加入Scott蓝化液(Servicebio,货号20230801)返蓝15秒,流水冲洗后用伊红染液(Solarbio,货号33535)染色3分钟,流水冲洗后脱水、透明、封片并镜检。Skin tissue pathological staining: Take skin tissue samples of the hind limbs of mice, fix them in 4% paraformaldehyde at room temperature for 4 hours, take out the tissue and rinse it with running water for several hours, dehydrate it with 70%, 80% and 90% ethanol solutions, and then treat it with a mixed solution of pure alcohol and xylene in equal amounts for 15 minutes, and permeabilize it with xylene solution twice, 15 minutes each time, until the sample is transparent. Soak it in a mixture of half xylene and half paraffin for 15 minutes, and then add paraffin I and paraffin II for permeabilization for one hour each. After paraffin embedding, the samples were sliced, baked, dewaxed and hydrated, and then the hydrated sections were placed in hematoxylin solution (Zhongshan Jinqiao, catalog number 23041001) for staining for 3 minutes, and then added with hydrochloric acid ethanol differentiation solution for differentiation for 15 seconds. After washing with water, Scott blueing solution (Servicebio, catalog number 20230801) was added to return to blue for 15 seconds. After rinsing with running water, the sections were stained with eosin staining solution (Solarbio, catalog number 33535) for 3 minutes. After rinsing with running water, the sections were dehydrated, transparent, sealed and examined under a microscope.
免疫组化染色:小鼠后肢足趾皮肤组织石蜡切片经烤片、脱蜡和水化后,用0.2M柠檬酸缓冲液(柠檬酸1.534g,柠檬酸钠3.1g,100mL蒸馏水,pH 4.7)进行抗原修复。经3%双氧水(山东安捷高科消毒科技有限公司,货号20290902)去内源性过氧化氢,室温孵育10分钟后用PBS缓冲液(NaCl 8g,KCl 0.2g,Na2HPO41.44g,1M HCl,pH 7.4)充分淋洗。用0.5%Triron-X-100(艾美捷科技,货号A-CSH436-100mL)通透,鼠抗IL-1β和兔IL-8各通透10分钟,兔抗IL-6不通透。5%BSA抗原封闭后,每张玻片滴加1/150稀释的鼠抗IL-1β(Affinity Biosciences,货号BF8021)、1/200稀释的兔抗IL-8(Affinity Biosciences,货号DF6998)或1/150稀释的兔抗IL-6(Affinity Biosciences,货号DF6087),放置于湿盒中4℃孵育过夜。取出孵育过夜的湿盒,室温静置45分钟,用PBS缓冲液浸洗玻片3次,每次15分钟,兔抗IL-8和和兔抗IL-6指标滴加1/100稀释的辣根酶标记山羊抗兔IgG(H+L)(中杉金桥,货号234750811),鼠抗IL-1β指标滴加1/100稀释的辣根酶标记山羊抗小鼠IgG(H+L)(中杉金桥,货号226700804),37℃孵育30分钟而后用PBS缓冲液充分淋洗。加入DAB(CWBIO,货号13723)显色3-5分钟,PBS缓冲液清洗1分钟,苏木精(中杉金桥,货号23041001)复染3分钟,盐酸酒精分化后返蓝,用水洗涤。切片依次放入80%酒精、95%酒精、无水乙醇、无水乙醇II快速脱水,二甲苯I和二甲苯II透明,中性树脂胶(Solarbio,货号20230725)封片并镜检。Immunohistochemical staining: After baking, dewaxing and hydration, paraffin sections of mouse hind limb skin tissue were used for antigen repair with 0.2M citric acid buffer (1.534g citric acid, 3.1g sodium citrate, 100mL distilled water, pH 4.7). Endogenous hydrogen peroxide was removed by 3% hydrogen peroxide (Shandong Anjie High-Tech Disinfection Technology Co., Ltd., item number 20290902), incubated at room temperature for 10 minutes, and then fully rinsed with PBS buffer (NaCl 8g, KCl 0.2g, Na 2 HPO 4 1.44g, 1M HCl, pH 7.4). 0.5% Triron-X-100 (Aimejie Technology, item number A-CSH436-100mL) was used for permeabilization, mouse anti-IL-1β and rabbit IL-8 were permeabilized for 10 minutes each, and rabbit anti-IL-6 was not permeabilized. After 5% BSA antigen blocking, 1/150 diluted mouse anti-IL-1β (Affinity Biosciences, Catalog No. BF8021), 1/200 diluted rabbit anti-IL-8 (Affinity Biosciences, Catalog No. DF6998) or 1/150 diluted rabbit anti-IL-6 (Affinity Biosciences, Catalog No. DF6087) was added to each slide and incubated in a humidified box at 4°C overnight. Take out the wet box incubated overnight, let it stand at room temperature for 45 minutes, wash the slides with PBS buffer 3 times, 15 minutes each time, add 1/100 diluted horseradish enzyme-labeled goat anti-rabbit IgG (H+L) (Zhongshan Jinqiao, catalog number 234750811) to rabbit anti-IL-8 and rabbit anti-IL-6 indicators, add 1/100 diluted horseradish enzyme-labeled goat anti-mouse IgG (H+L) (Zhongshan Jinqiao, catalog number 226700804) to mouse anti-IL-1β indicators, incubate at 37°C for 30 minutes and then rinse thoroughly with PBS buffer. Add DAB (CWBIO, catalog number 13723) for color development for 3-5 minutes, wash with PBS buffer for 1 minute, counterstain with hematoxylin (Zhongshan Jinqiao, catalog number 23041001) for 3 minutes, differentiate with hydrochloric acid alcohol to turn blue, and wash with water. The sections were placed in 80% alcohol, 95% alcohol, anhydrous ethanol, and anhydrous ethanol II in sequence for rapid dehydration. Xylene I and xylene II were transparent. The sections were sealed with neutral resin glue (Solarbio, product number 20230725) and examined under a microscope.
结果如图28所示,用索拉非尼和奥希替尼造模14天后,小鼠后肢足趾皮肤出现明显病变。与正常对照组相比,索拉非尼组和奥希替尼组小鼠后肢足趾皮肤出现明显红肿和皲裂。The results are shown in Figure 28. After 14 days of modeling with sorafenib and osimertinib, obvious lesions appeared on the skin of the hind limbs and toes of mice. Compared with the normal control group, the skin of the hind limbs and toes of mice in the sorafenib group and osimertinib group showed obvious redness, swelling and cracking.
小鼠后肢足趾肿胀程度如图29所示,造模药物索拉非尼和奥希替尼在连续口服14天之后会导致小鼠后肢足趾显著性肿胀。在小鼠后肢足趾局部涂抹式(I)化合物软膏可以有效的改善由于造模药物所导致的足趾肿胀。但是口服100mg/kg烟酰胺对于小鼠后肢足趾的肿胀未观察到明显改善。The degree of swelling of the hind limb toes of mice is shown in Figure 29. The modeling drugs sorafenib and osimertinib can cause significant swelling of the hind limb toes of mice after continuous oral administration for 14 days. Local application of the ointment of the compound of formula (I) on the hind limb toes of mice can effectively improve the swelling of the toes caused by the modeling drugs. However, no significant improvement was observed in the swelling of the hind limb toes of mice after oral administration of 100 mg/kg nicotinamide.
足趾皮肤组织病理染色结果如图30所示,与正常对照组相比,造模药物索拉非尼和奥希替尼在连续口服14天之后会导致小鼠后肢足趾皮肤组织中表皮层和角质层显著增厚,基底层颗粒细胞增多,可见炎性细胞浸润。在小鼠后肢足趾局部涂抹式(I)化合物软膏可以有效的改善皮肤组织表皮层和角质层的增厚现象,基底层细胞形态恢复正常,未见炎性细胞浸润。但是口服100mg/kg烟酰胺对于小鼠后肢足趾皮肤组织的表皮层和角质层的增厚无显著性改善,基底层细胞形态略有恢复,仍见炎性细胞浸润。The results of pathological staining of toe skin tissue are shown in Figure 30. Compared with the normal control group, the modeling drugs sorafenib and osimertinib can cause the epidermis and stratum corneum in the skin tissue of the hind limbs of mice to increase significantly after continuous oral administration for 14 days, increase the granular cells in the basal layer, and visible inflammatory cell infiltration. The ointment of the compound of formula (I) applied locally to the hind limbs of mice can effectively improve the thickening of the epidermis and stratum corneum of the skin tissue, and the morphology of the basal layer cells returns to normal, and no inflammatory cell infiltration is seen. However, oral administration of 100 mg/kg nicotinamide has no significant improvement in the thickening of the epidermis and stratum corneum of the skin tissue of the hind limbs of mice, and the morphology of the basal layer cells is slightly restored, and inflammatory cell infiltration is still seen.
索拉非尼造模系列组别的免疫组化结果如图31所示,与正常对照组相比,造模药物索拉非尼在连续口服14天之后导致小鼠后肢足趾皮肤组织中细胞因子IL-1β显著性上升(p<0.05)。这说明口服索拉非尼会导致小鼠出现皮肤炎症,与临床试验观察结果相符。小鼠后肢足趾局部涂抹式(I)化合物软膏可以显著性降低小鼠后肢足趾皮肤组织中细胞因子IL-1β的表达水平(p<0.05)。但是口服100mg/kg烟酰胺对于小鼠后肢足趾皮肤组织中细胞因子IL-1β的表达水平没有显著性影响。The immunohistochemical results of the Sorafenib modeling series are shown in Figure 31. Compared with the normal control group, the modeling drug Sorafenib caused a significant increase in the cytokine IL-1β in the skin tissue of the hind limbs and toes of mice after continuous oral administration for 14 days (p<0.05). This shows that oral administration of Sorafenib can cause skin inflammation in mice, which is consistent with the results of clinical trial observations. Local application of the compound ointment of formula (I) on the hind limbs and toes of mice can significantly reduce the expression level of the cytokine IL-1β in the skin tissue of the hind limbs and toes of mice (p<0.05). However, oral administration of 100 mg/kg nicotinamide had no significant effect on the expression level of the cytokine IL-1β in the skin tissue of the hind limbs and toes of mice.
奥希替尼造模系列组别的免疫组化结果如图32所示,与正常对照组相比,造模药物奥希替尼在连续口服14天之后导致小鼠后肢足趾皮肤组织中细胞因子IL-1β显著性上升(p<0.05)。这说明口服奥希替尼会导致小鼠出现皮肤炎症,与临床试验观察结果相符。小鼠后肢足趾局部涂抹式(I)化合物软膏可以显著性降低小鼠后肢足趾皮肤组织中细胞因子IL-1β的表达水平(p<0.05)。但是口服100mg/kg烟酰胺对于小鼠后肢足趾皮肤组织中细胞因子IL-1β的表达水平没有显著性影响。The immunohistochemical results of the osimertinib modeling series are shown in Figure 32. Compared with the normal control group, the modeling drug osimertinib caused a significant increase in the cytokine IL-1β in the skin tissue of the hind limbs and toes of mice after continuous oral administration for 14 days (p<0.05). This shows that oral administration of osimertinib can cause skin inflammation in mice, which is consistent with the results of clinical trial observations. Local application of the compound ointment of formula (I) on the hind limbs and toes of mice can significantly reduce the expression level of the cytokine IL-1β in the skin tissue of the hind limbs and toes of mice (p<0.05). However, oral administration of 100 mg/kg nicotinamide had no significant effect on the expression level of the cytokine IL-1β in the skin tissue of the hind limbs and toes of mice.
实施例13:式(I)所示化合物与异烟酰胺形成的药物共晶的制备Example 13: Preparation of drug co-crystals formed by the compound represented by formula (I) and isonicotinamide
称取约20mg式(I)所示化合物,与10.2mg的异烟酰胺置于2mL玻璃瓶中,加入乙醇(0.2mL)得到混悬液。所得样品在5℃下混悬搅拌3天。将所得混悬液通过0.45μm尼龙滤膜以14,000rpm转速离心,所得的固体在25℃下真空干燥4小时后得到产品。经X-射线粉末衍射检测,该产物为式(I)所示化合物与异烟酰胺形成的药物共晶,XRPD谱图如图1所示,其特征峰位置如表4所示。DSC谱图显示,熔融Tonset 160.45℃。所得药物共晶化学剂量比为1:1。About 20 mg of the compound represented by formula (I) was weighed and placed in a 2 mL glass bottle with 10.2 mg of isonicotinamide, and ethanol (0.2 mL) was added to obtain a suspension. The obtained sample was suspended and stirred at 5°C for 3 days. The obtained suspension was centrifuged at 14,000 rpm through a 0.45 μm nylon filter membrane, and the obtained solid was vacuum dried at 25°C for 4 hours to obtain the product. X-ray powder diffraction detection showed that the product was a drug co-crystal formed by the compound represented by formula (I) and isonicotinamide, and the XRPD spectrum was shown in Figure 1, and the characteristic peak positions were shown in Table 4. The DSC spectrum showed that the melting Tonset was 160.45°C. The chemical dosage ratio of the obtained drug co-crystal was 1:1.
表4式(I)所示化合物与异烟酰胺形成的药物共晶的XRPD衍射峰数据
Table 4 XRPD diffraction peak data of drug co-crystal formed by the compound represented by formula (I) and isonicotinamide
实施例14:式(I)所示化合物与乙醇酸形成的药物共晶的制备Example 14: Preparation of pharmaceutical co-crystals formed by the compound represented by formula (I) and glycolic acid
称取约20mg式(I)所示化合物,与6.3mg的乙醇酸置于2mL玻璃瓶中,加入醋酸异丙酯(0.2mL)得到混悬液。所得样品在5℃下混悬搅拌3天。将所得混悬液通过0.45μm尼龙滤膜以14,000rpm转速离心,所得的固体在25℃下真空干燥4小时后得到产品。经X-射线粉末衍射检测,该产物为式(I)所示化合物与乙醇酸形成的药物共晶,XRPD谱图如图4所示,其特征峰位置如表5所示。DSC谱图显示,熔融Tonset@135.68℃。所得药物共晶化学剂量比为1:1。About 20 mg of the compound represented by formula (I) was weighed and placed in a 2 mL glass bottle with 6.3 mg of glycolic acid, and isopropyl acetate (0.2 mL) was added to obtain a suspension. The obtained sample was suspended and stirred at 5°C for 3 days. The obtained suspension was centrifuged at 14,000 rpm through a 0.45 μm nylon filter membrane, and the obtained solid was vacuum dried at 25°C for 4 hours to obtain the product. X-ray powder diffraction detection showed that the product was a drug co-crystal formed by the compound represented by formula (I) and glycolic acid. The XRPD spectrum is shown in Figure 4, and the characteristic peak positions are shown in Table 5. The DSC spectrum shows that the melting T onset @135.68°C. The chemical dosage ratio of the obtained drug co-crystal is 1:1.
表5式(I)所示化合物与乙醇酸形成的药物共晶的XRPD衍射峰数据
Table 5 XRPD diffraction peak data of drug co-crystals formed by the compound represented by formula (I) and glycolic acid
实施例15:式(I)所示化合物与L-脯氨酸形成的药物共晶的制备Example 15: Preparation of a pharmaceutical co-crystal formed by the compound represented by formula (I) and L-proline
称取约20mg式(I)所示化合物,与9.7mg的L-脯氨酸置于2mL玻璃瓶中,加入乙醇(0.25mL)得到混悬液。所得样品在5℃下混悬搅拌3天。将所得混悬液通过0.45μm尼龙滤膜以14,000rpm转速离心,所得的固体在25℃下真空干燥4小时后得到产品。经X-射线粉末衍射检测,该产物为式(I)所示化合物与L-脯氨酸形成的药物共晶,XRPD谱图如图7所示,其特征峰位置如表6所示。DSC谱图显示,熔融Tonset@183.55℃。所得药物共晶化学剂量比为1:1。About 20 mg of the compound represented by formula (I) was weighed and placed in a 2 mL glass bottle with 9.7 mg of L-proline, and ethanol (0.25 mL) was added to obtain a suspension. The obtained sample was suspended and stirred at 5°C for 3 days. The obtained suspension was centrifuged at 14,000 rpm through a 0.45 μm nylon filter membrane, and the obtained solid was vacuum dried at 25°C for 4 hours to obtain the product. X-ray powder diffraction detection showed that the product was a drug co-crystal formed by the compound represented by formula (I) and L-proline, and the XRPD spectrum was shown in Figure 7, and the characteristic peak positions were shown in Table 6. The DSC spectrum showed that the melting T onset @183.55°C. The chemical dosage ratio of the obtained drug co-crystal was 1:1.
表6:式(I)所示化合物与L-脯氨酸形成的药物共晶的XRPD衍射峰数据
Table 6: XRPD diffraction peak data of drug co-crystal formed by the compound represented by formula (I) and L-proline
实施例16:式(I)所示化合物与L-脯氨酸形成的药物共晶的制备Example 16: Preparation of a pharmaceutical co-crystal formed by the compound represented by formula (I) and L-proline
称取约300mg式(I)所示化合物与145.8mg的L-脯氨酸(1.0当量)置于20mL玻璃瓶中。加入3.75mL乙醇,在5℃下搅拌2min得到混悬液。向上述混悬液中加入约5mg式(I)所示化合物与L-脯氨酸形成的药物共晶的晶种。再向上述混悬液中添加3mL乙醇并在5℃下搅拌4天。通过离心收集固体部分,并将所得固体部分置于室温真空条件下干燥约2.5小时。共得到白色粉末250mg,产率为56%。经X-射线粉末衍射检测,该产物为式(I)所示化合物与L-脯氨酸形成的药物共晶。Weigh about 300 mg of the compound of formula (I) and 145.8 mg of L-proline (1.0 equivalent) into a 20 mL glass bottle. Add 3.75 mL of ethanol and stir at 5 ° C for 2 min to obtain a suspension. Add about 5 mg of the seed crystals of the drug co-crystal formed by the compound of formula (I) and L-proline to the above suspension. Add 3 mL of ethanol to the above suspension and stir at 5 ° C for 4 days. Collect the solid part by centrifugation, and dry the obtained solid part under vacuum conditions at room temperature for about 2.5 hours. A total of 250 mg of white powder is obtained, with a yield of 56%. X-ray powder diffraction detection shows that the product is a drug co-crystal formed by the compound of formula (I) and L-proline.
实施例17:式(I)所示化合物与烟酰胺形成的药物共晶的制备Example 17: Preparation of drug co-crystals formed by the compound represented by formula (I) and nicotinamide
称取约20mg式(I)所示化合物,与10.3mg的烟酰胺置于2mL玻璃瓶中,加入乙腈(0.25mL)得到混悬液。所得样品在5℃下混悬搅拌3天。将所得混悬液通过0.45μm尼龙滤膜以14,000rpm转速离心,所得的固体在25℃下真空干燥4小时后得到产品。经X-射线粉末衍射检测,该产物为式(I)所示化合物与烟酰胺形成的药物共晶,XRPD谱图如图10所示,其特征峰位置如表7所示。DSC谱图显示,熔融Tonset@156.75℃。所得药物共晶化学剂量比为1:1。About 20 mg of the compound represented by formula (I) was weighed and placed in a 2 mL glass bottle with 10.3 mg of nicotinamide, and acetonitrile (0.25 mL) was added to obtain a suspension. The obtained sample was suspended and stirred at 5°C for 3 days. The obtained suspension was centrifuged at 14,000 rpm through a 0.45 μm nylon filter membrane, and the obtained solid was vacuum dried at 25°C for 4 hours to obtain the product. X-ray powder diffraction detection showed that the product was a drug co-crystal formed by the compound represented by formula (I) and nicotinamide, and the XRPD spectrum was shown in Figure 10, and the characteristic peak positions were shown in Table 7. The DSC spectrum showed that the melting T onset @156.75°C. The chemical dosage ratio of the obtained drug co-crystal was 1:1.
表7式(I)所示化合物与烟酰胺形成的药物共晶的XRPD衍射峰数据
Table 7 XRPD diffraction peak data of drug co-crystal formed by the compound represented by formula (I) and nicotinamide
实施例18:式(I)所示化合物与烟酰胺形成的药物共晶的制备Example 18: Preparation of drug co-crystals formed by the compound represented by formula (I) and nicotinamide
称取约300mg式(I)所示化合物与154.6mg的烟酰胺(1.0当量)置于20mL玻璃瓶中。加入3.75mL乙腈,在5℃下搅拌2min得到混悬液。向上述混悬液中加入约5mg式(I)所示化合物与烟酰胺形成的药物共晶的晶种。再向上述混悬液中添加2mL乙腈并在5℃下搅拌4天。通过离心收集固体部分,并将所得固体部分置于室温真空条件下干燥约2.5小时。共得到白色粉末365mg,产率为80%。经X-射线粉末衍射检测,该产物为式(I)所示化合物与烟酰胺形成的药物共晶。About 300 mg of the compound of formula (I) and 154.6 mg of nicotinamide (1.0 equivalent) were weighed and placed in a 20 mL glass bottle. 3.75 mL of acetonitrile was added and stirred at 5°C for 2 min to obtain a suspension. About 5 mg of the seed crystals of the drug co-crystal formed by the compound of formula (I) and nicotinamide were added to the above suspension. 2 mL of acetonitrile was added to the above suspension and stirred at 5°C for 4 days. The solid part was collected by centrifugation, and the obtained solid part was placed under vacuum at room temperature and dried for about 2.5 hours. A total of 365 mg of white powder was obtained with a yield of 80%. The product was detected by X-ray powder diffraction as a drug co-crystal formed by the compound of formula (I) and nicotinamide.
综上共得到4种药物共晶,其中乙醇酸共晶通常有吸湿性问题,异烟酰胺与烟酰胺类似,但烟酰胺为GRAS试剂(Generally Recognized As Safe,公认安全),异烟酰胺为非GRAS试剂,最终选择L-脯氨酸共晶和烟酰胺共晶继续研究稳定性和吸湿性等成药性质。In summary, four drug cocrystals were obtained, among which glycolic acid cocrystals usually have hygroscopicity problems, isonicotinamide is similar to nicotinamide, but nicotinamide is a GRAS agent (Generally Recognized As Safe), and isonicotinamide is a non-GRAS agent. Finally, L-proline cocrystals and nicotinamide cocrystals were selected to continue studying drug properties such as stability and hygroscopicity.
实施例19:式(I)所示化合物与L-脯氨酸形成的药物共晶和式(I)所示化合物与烟酰胺形成的药物共晶的稳定性测试Example 19: Stability test of drug co-crystals formed by the compound represented by formula (I) and L-proline and drug co-crystals formed by the compound represented by formula (I) and nicotinamide
将盛有式(I)所示化合物与L-脯氨酸形成的药物共晶和式(I)所示化合物与烟酰胺形成的药物共晶的敞口容器分别放置于25℃/92.5%RH中一周。将盛有式(I)所示化合物与L-脯氨酸形成的药物共晶和式(I)所示化合物与烟酰胺形成的药物共晶分别放置于60℃密闭容器中一周。用XRPD以及HPLC对固体稳定性评估后样品进行表征,并观察样品颜色变化情况,结论如表8所示。The open containers containing the drug co-crystals formed by the compound of formula (I) and L-proline and the drug co-crystals formed by the compound of formula (I) and nicotinamide were placed at 25°C/92.5%RH for one week. The drug co-crystals formed by the compound of formula (I) and L-proline and the drug co-crystals formed by the compound of formula (I) and nicotinamide were placed in a sealed container at 60°C for one week. The samples after solid stability evaluation were characterized by XRPD and HPLC, and the color change of the samples was observed. The conclusions are shown in Table 8.
表8式(I)所示化合物形成的药物共晶固体稳定性
Table 8 Solid stability of drug co-crystals formed by compounds represented by formula (I)
由表8可知,式(I)所示化合物与L-脯氨酸形成的药物共晶与烟酰胺形成的药物共晶在25℃/92%RH条件下放置于敞口容器中一周或在60℃条件下放置于密闭容器中一周后,纯度均无明显下降,但式(I)所示化合物与L-脯氨酸形成的药物共晶在25℃/92.5%RH下部分解离为游离态晶型与L-脯氨酸。式(I)所示化合物与烟酰胺形成的药物共晶在两个条件下都较稳定。As shown in Table 8, the drug co-crystals formed by the compound represented by formula (I) and L-proline and the drug co-crystals formed by nicotinamide were placed in an open container for one week at 25°C/92%RH or in a closed container for one week at 60°C. However, the drug co-crystals formed by the compound represented by formula (I) and L-proline were partially dissociated into free crystals and L-proline at 25°C/92.5%RH. The drug co-crystals formed by the compound represented by formula (I) and nicotinamide were relatively stable under both conditions.
实施例20:式(I)所示化合物与L-脯氨酸形成的药物共晶和式(I)所示化合物与烟酰胺形成的药物共晶的溶解度测试Example 20: Solubility test of drug co-crystals formed by the compound represented by formula (I) and L-proline and drug co-crystals formed by the compound represented by formula (I) and nicotinamide
精确称量15.1mg式(I)所示化合物与L-脯氨酸形成的药物共晶和14.9mg式(I)所示化合物与烟酰胺形成的药物共晶分别置于20mL玻璃瓶中。各加入5mL溶媒。所称取共晶中式(I)所示化合物的质量相当于10mg游离态无水晶型。将所得混悬液于37℃下以400rpm转速搅拌,并分别在0.5小时和2小时取样。将样品于37℃下以14,000rpm转速离心5min。通过HPLC测定上清液浓度并通过pH计测定上清液的pH值。通过XRPD检测2小时后残留固体(湿品)是否有晶型变化。实验结果如表9所示。15.1 mg of the drug co-crystal formed by the compound represented by formula (I) and L-proline and 14.9 mg of the drug co-crystal formed by the compound represented by formula (I) and nicotinamide were accurately weighed and placed in 20 mL glass bottles. 5 mL of solvent was added to each. The mass of the compound represented by formula (I) in the weighed co-crystal was equivalent to 10 mg of free anhydrous crystalline form. The resulting suspension was stirred at 400 rpm at 37°C, and samples were taken at 0.5 hours and 2 hours respectively. The sample was centrifuged at 14,000 rpm at 37°C for 5 minutes. The concentration of the supernatant was determined by HPLC and the pH value of the supernatant was determined by a pH meter. Whether the residual solid (wet product) after 2 hours has a change in crystal form was detected by XRPD. The experimental results are shown in Table 9.
表9式(I)所示化合物形成的药物共晶的固体溶解度
Table 9 Solid solubility of drug co-crystals formed by the compound represented by formula (I)
由表9可知,式(I)所示化合物与L-脯氨酸形成的药物共晶以及烟酰胺形成的药物共晶在四种不同溶媒中均转变为式(I)所示化合物的游离态晶型。此外,与L-脯氨酸形成的药物共晶以及与烟酰胺形成的药物共晶在其余溶媒中的溶解度均较高,并且式(I)所示化合物与烟酰胺形成的药物共晶在四种溶媒中溶解2h后的溶解度均高于与L-脯氨酸形成的药物共晶。As shown in Table 9, the drug co-crystals formed by the compound represented by formula (I) and L-proline and the drug co-crystals formed by nicotinamide are transformed into the free crystal form of the compound represented by formula (I) in four different solvents. In addition, the drug co-crystals formed with L-proline and the drug co-crystals formed with nicotinamide have high solubility in the remaining solvents, and the solubility of the drug co-crystals formed by the compound represented by formula (I) and nicotinamide after being dissolved in the four solvents for 2 hours is higher than that of the drug co-crystals formed with L-proline.
实施例21:式(I)所示化合物与L-脯氨酸形成的药物共晶和式(I)所示化合物与烟酰胺形成的药物共晶的引湿性测试Example 21: Hygroscopicity test of drug co-crystals formed by the compound represented by formula (I) and L-proline and drug co-crystals formed by the compound represented by formula (I) and nicotinamide
在25℃下通过DVS测试对式(I)所示化合物与L-脯氨酸形成的药物共晶和式(I)所示化合物与烟酰胺形成的药物共晶的吸水和脱水行为进行了研究。DVS循环为,40-0-95-0-40%RH。并对DVS测试后的样品进行了XRPD检测,以判断是否发生晶型转变,结果如表10所示。The water absorption and dehydration behaviors of the drug co-crystals formed by the compound represented by formula (I) and L-proline and the drug co-crystals formed by the compound represented by formula (I) and nicotinamide were studied by DVS test at 25°C. The DVS cycle was 40-0-95-0-40% RH. XRPD was performed on the samples after DVS test to determine whether crystal transformation occurred. The results are shown in Table 10.
表10式(I)所示化合物形成的药物共晶的引湿性测试
Table 10 Hygroscopicity test of drug co-crystals formed by compounds represented by formula (I)
由表10结果可知,式(I)所示化合物与L-脯氨酸形成的药物共晶在40%RH至80%RH间略有吸湿性,吸湿增重约0.4%;在80%RH至95%RH间极具吸湿性,吸湿增重约84.0%。DVS测试后,该共晶部分解离为游离态晶型和L-脯氨酸。式(I)所示化合物与烟酰胺形成的药物共晶略有吸湿性,其在25℃下40%RH至95%RH间吸湿增重约0.2%。DVS测试后,晶型未发生转变。From the results in Table 10, it can be seen that the drug co-crystal formed by the compound shown in formula (I) and L-proline is slightly hygroscopic between 40% RH and 80% RH, and the weight gain by moisture absorption is about 0.4%; it is extremely hygroscopic between 80% RH and 95% RH, and the weight gain by moisture absorption is about 84.0%. After DVS test, the co-crystal is partially dissociated into free crystal form and L-proline. The drug co-crystal formed by the compound shown in formula (I) and nicotinamide is slightly hygroscopic, and its weight gain by moisture absorption is about 0.2% between 40% RH and 95% RH at 25°C. After DVS test, the crystal form did not change.
应当理解,以上实施例均为示例性的,不用于包含权利要求所包含的所有可能的实施方式。在不脱离本公开的范围的情况下,还可以在以上实施例的基础上做出各种变形和改变。同样的,也可以对以上实施例的各个技术特征进行任意组合,以形成可能没有被明确描述的本发明的另外的实施例。因此,上述实施例仅表达了本发明的几种实施方式,不对本发明专利的保护范围进行限制。It should be understood that the above embodiments are exemplary and are not intended to include all possible implementations included in the claims. Various modifications and changes may be made on the basis of the above embodiments without departing from the scope of the present disclosure. Similarly, the various technical features of the above embodiments may be arbitrarily combined to form other embodiments of the present invention that may not be explicitly described. Therefore, the above embodiments only express several implementations of the present invention and do not limit the scope of protection of the patent of the present invention.
Claims (17)
A pharmaceutical co-crystal formed by combining a compound represented by formula (I) and a co-crystal former, wherein the co-crystal former is selected from nicotinamide, isonicotinamide, L-proline, glycolic acid,
The drug co-crystal formed by the compound represented by formula (I) and isonicotinamide,
The drug co-crystal formed by the compound represented by formula (I) and glycolic acid,
The drug co-crystal formed by the compound represented by formula (I) and L-proline,
The drug co-crystal formed by the compound represented by formula (I) and nicotinamide,
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| CN103958467A (en) * | 2011-10-20 | 2014-07-30 | 锡耶纳生物技术股份公司 | Process for preparing 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide and its precursors |
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