WO2025114459A1 - Tetracyclic compounds for use in antibody-drug conjugates for the treatment of cancer - Google Patents
Tetracyclic compounds for use in antibody-drug conjugates for the treatment of cancer Download PDFInfo
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- WO2025114459A1 WO2025114459A1 PCT/EP2024/083952 EP2024083952W WO2025114459A1 WO 2025114459 A1 WO2025114459 A1 WO 2025114459A1 EP 2024083952 W EP2024083952 W EP 2024083952W WO 2025114459 A1 WO2025114459 A1 WO 2025114459A1
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D513/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00
- C07D513/12—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00 in which the condensed system contains three hetero rings
- C07D513/14—Ortho-condensed systems
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
- C07D471/12—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains three hetero rings
- C07D471/14—Ortho-condensed systems
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D498/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms
- C07D498/12—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms in which the condensed system contains three hetero rings
- C07D498/14—Ortho-condensed systems
Definitions
- the present invention relates to fused tetracyclic heteroaromatic compounds and antibody-drug conjugates (ADCs) comprising the compounds.
- ADCs antibody-drug conjugates
- the present invention also relates to processes for the preparation of the compounds and ADCs, and to pharmaceutical compositions containing them and their use in therapy, particularly for use in treating cancers.
- G-quadruplexes are four-stranded, non-canonical nucleic acid secondary structures which can form in guanine-rich DNA and RNA sequences. In the human genome, there are over 700,000 G4 forming sequences. 3-5 These G4 motifs are particularly enriched at repetitive elements of the genome, e.g. telomeres, and at gene regulatory regions of protein-coding genes including many oncogenes.
- G4s have been implicated in several key genome functions such as transcription, replication, translation, telomere maintenance and epigenetic regulation. 13 Many G4s are likely transient and readily resolved by helicases 14 . Unresolved DNA G4s can impede DNA polymerases causing DNA damage and requiring homologous recombination (HR) repair 15 - 16 .
- HR homologous recombination
- G4L G4 ligands
- Cancer cells often display higher sensitivity to G4L treatment than non-cancerous cells in accordance with the higher occurrence of folded G4s in the chromatin of cancer cell lines and tissues 9 - 22 .
- some G4Ls are synthetic lethal with loss of various cellular functions 24 , in particular DNA damage repair 25-28 , suggesting a biomarker- driven therapeutic approach as well as combination treatment with other agents.
- G4Ls have shown activity in HR-deficient cells and tumour models that were resistant to PARP inhibitor treatment as well as gemcitabine-resistant pancreatic cancer cells, indicating that some G4Ls may be used to target difficult to treat certain tumours with acquired resistances. 25 - 29 ' 30
- the G4L CX-5461 entered clinical trials for solid tumours with HR-deficiency mutations (NCT02719977) 26 .
- An observed reversion of BRCA2 and PALB2 confirmed the mechanism of action.
- the molecule was overall well tolerated, but displayed doselimiting phototoxicity. 26
- photosensitivity had been observed in a previous clinical trial of CX-5461 in patients with hematologic malignancies. 31
- a first aspect of the invention provides a compound of Formula (I):
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises:
- X 1 is N, C-H, C-Hal or C-R X1 ;
- X 2 is N
- X 3 is N, C-H, C-Hal or C-R X3 ;
- X 4 is N or C; provided that no more than three of X 1 , X 2 , X 3 and X 4 are N;
- R X1 and R X3 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO?
- Q 1 is O, S, N, N-H, N-R Q1 , C-H, C-Hal, or C-R « 2 ;
- a 1 is N, C-H, C-Hal or C-R A1 ;
- a 2 is N, C-H, C-Hal or C-R A2 ;
- a 3 is N, C-H, C-Hal or C-R A3 ;
- a 4 is N, C-H, C-Hal or C-R A4 ;
- a 5 is N or C; provided that no more than three of A 1 , A 2 , A 3 , A 4 and A 5 are N;
- a 6 is N or C; and each Hal is independently selected from a fluoro, chloro, bromo or iodo group.
- each of the four rings in the fused tetracyclic ring system of Formula (I) is aromatic.
- X 1 , X 2 , X 3 , X 4 , A 1 , A 2 , A 3 , A 4 , A 5 , A 6 and Q 1 are selected such that each ring of the fused tetracyclic ring system of Formula (I) is aromatic.
- hydrocarbyl substituent group or a hydrocarbyl moiety in a substituent group only includes carbon and hydrogen atoms but, unless stated otherwise, does not include any heteroatoms, such as N, O or S, in its carbon skeleton.
- a hydrocarbyl group/moiety may be saturated or unsaturated (including aromatic), and may be straight-chained or branched, or be or include cyclic groups wherein, unless stated otherwise, the cyclic group does not include any heteroatoms, such as N, O or S, in its carbon skeleton.
- hydrocarbyl groups include alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl and aryl groups/moieties and combinations of all of these groups/moieties.
- a hydrocarbyl group is a C1-C20 hydrocarbyl group. More typically a hydrocarbyl group is a C1-C15 hydrocarbyl group. More typically a hydrocarbyl group is a C1-C10 hydrocarbyl group.
- a "hydrocarbylene" group is similarly defined as a divalent hydrocarbyl group.
- alkyl substituent group or an alkyl moiety in a substituent group may be linear (i.e. straight-chained) or branched.
- alkyl groups/moieties include methyl, ethyl, n-propyl, /-propyl, n-butyl, /-butyl, t-butyl and n-pentyl groups/moieties.
- alkyl does not include "cycloalkyl”.
- an alkyl group is a C1-C12 alkyl group. More typically an alkyl group is a Ci-Ce alkyl group.
- An "alkylene” group is similarly defined as a divalent alkyl group.
- alkenyl substituent group or an alkenyl moiety in a substituent group refers to an unsaturated alkyl group or moiety having one or more carbon-carbon double bonds.
- alkenyl groups/moieties include ethenyl, propenyl, 1-butenyl, 2-butenyl, 1-pentenyl, 1-hexenyl, 1,3-butadienyl, 1,3-pentadienyl, 1,4-pentadienyl and 1,4- hexadienyl groups/moieties.
- alkenyl does not include "cycloalkenyl".
- an alkenyl group is a C2-C12 alkenyl group. More typically an alkenyl group is a C2-C6 alkenyl group.
- An "alkenylene” group is similarly defined as a divalent alkenyl group.
- alkynyl substituent group or an alkynyl moiety in a substituent group refers to an unsaturated alkyl group or moiety having one or more carbon-carbon triple bonds.
- alkynyl groups/moieties include ethynyl, propargyl, but-l-ynyl and but-2- ynyl groups/moieties.
- an alkynyl group is a C2-C12 alkynyl group. More typically an alkynyl group is a C2-C6 alkynyl group.
- An "alkynylene” group is similarly defined as a divalent alkynyl group.
- a "cyclic" substituent group or a cyclic moiety in a substituent group refers to any hydrocarbyl ring, wherein the hydrocarbyl ring may be saturated or unsaturated (including aromatic) and may include one or more heteroatoms, e.g. N, O or S, in its carbon skeleton.
- Examples of cyclic groups include cycloalkyl, cycloalkenyl, heterocyclic, aryl and heteroaryl groups as discussed below.
- a cyclic group may be monocyclic, bicyclic (e.g. bridged, fused or spiro), or polycyclic.
- a cyclic group is a 3- to 12-membered cyclic group, which means it contains from 3 to 12 ring atoms. More typically, a cyclic group is a 3- to 7-membered monocyclic group, which means it contains from 3 to 7 ring atoms.
- bicyclic or polycyclic group is "saturated" it is to be understood that all of the ring systems within the bicyclic or polycyclic group (excluding any ring systems which are part of or formed by optional substituents) are saturated.
- heterocyclic substituent group or a heterocyclic moiety in a substituent group refers to a cyclic group or moiety including one or more carbon atoms and one or more (such as one, two, three or four) heteroatoms, e.g. N, O or S, in the ring structure.
- heterocyclic groups include heteroaryl groups as discussed below and non-aromatic heterocyclic groups such as azetinyl, azetidinyl, oxetanyl, thietanyl, pyrrolidinyl, tetrahydrofuranyl, tetrahydrothiophenyl, pyrazolidinyl, imidazolidinyl, dioxolanyl, oxathiolanyl, piperidinyl, tetrahydropyranyl, thianyl, piperazinyl, dioxanyl, morpholinyl and thiomorpholinyl groups.
- non-aromatic heterocyclic groups such as azetinyl, azetidinyl, oxetanyl, thietanyl, pyrrolidinyl, tetrahydrofuranyl, tetrahydrothiophenyl, pyrazolidinyl, imidazo
- a "cycloalkyl" substituent group or a cycloalkyl moiety in a substituent group refers to a saturated hydrocarbyl ring containing, for example, from 3 to 7 carbon atoms, examples of which include cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl. Unless stated otherwise, a cycloalkyl substituent group or moiety may include monocyclic, bicyclic or polycyclic hydrocarbyl rings.
- a "cycloalkenyl" substituent group or a cycloalkenyl moiety in a substituent group refers to a non-aromatic unsaturated hydrocarbyl ring having one or more carboncarbon double bonds and containing, for example, from 3 to 7 carbon atoms, examples of which include cyclopent-l-en-l-yl, cyclohex-l-en-l-yl and cyclohex-1, 3- dien-l-yl.
- a cycloalkenyl substituent group or moiety may include monocyclic, bicyclic or polycyclic hydrocarbyl rings.
- aryl substituent group or an aryl moiety in a substituent group refers to an aromatic hydrocarbyl ring.
- aryl refers to monocyclic aromatic hydrocarbons and polycyclic fused ring aromatic hydrocarbons wherein all of the fused ring systems (excluding any ring systems which are part of or formed by optional substituents) are aromatic. Examples of aryl groups/moieties include phenyl, naphthyl, anthracenyl and phenanthrenyl. Unless stated otherwise, the term “aryl” does not include “heteroaryl”.
- heteroaryl substituent group or a heteroaryl moiety in a substituent group refers to an aromatic heterocyclic group or moiety.
- heteroaryl refers to monocyclic aromatic heterocycles and polycyclic fused ring aromatic heterocycles wherein all of the fused ring systems (excluding any ring systems which are part of or formed by optional substituents) are aromatic.
- 5- or 6-membered heteroaryl groups include furanyl, thiophenyl, pyrrolyl, imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, thiazolyl, isothiazolyl, triazolyl, furazanyl, oxadiazolyl, thiadiazolyl, tetrazolyl, pyridinyl, pyridazinyl, pyrimidinyl, pyrazinyl and triazinyl groups.
- a cyclic group or moiety is stated to be aromatic, such as an aryl or a heteroaryl group, it is to be understood that each ring system within the group or moiety (excluding any ring systems which are part of or formed by optional substituents) is aromatic.
- a cyclic group or moiety is stated to be non-aromatic, such as a cycloalkyl, cycloalkenyl or non-aromatic heterocyclic group, it is to be understood that each ring system within the group or moiety (excluding any ring systems which are part of or formed by optional substituents) is non-aromatic.
- arylalkyl arylalkenyl, arylalkynyl, alkylaryl, alkenylaryl or alkynylaryl
- the last mentioned moiety contains the atom by which the group is attached to the rest of the molecule.
- An example of an arylalkyl group is benzyl.
- each hydrogen atom may optionally be replaced by any specified monovalent substituent; any two hydrogen atoms attached to the same carbon or nitrogen atom may optionally be replaced by any specified n-bonded substituent; any sulphur atom may optionally be substituted with one or two of any specified n-bonded substituents; and any two hydrogen atoms attached to the same or different atoms, within the same optionally substituted group or moiety, may optionally be replaced by any specified divalent bridging substituent.
- a substituted group comprises 1, 2, 3 or 4 substituents, more typically 1, 2 or 3 substituents, more typically 1 or 2 substituents, and more typically 1 substituent.
- any divalent bridging substituent e.g. -O-, -S-, -NH-, -CH2-, -CH2-CH2-, etc.
- an optionally substituted group or moiety e.g. R 1
- R 2 a second group or moiety
- halo includes fluoro, chloro, bromo and iodo.
- halo such as a haloalkyl or halomethyl group
- the group in question is substituted with one or more halo groups independently selected from fluoro, chloro, bromo and iodo.
- the maximum number of halo substituents is limited only by the number of hydrogen atoms available for substitution on the corresponding group without the halo prefix.
- a halomethyl group may contain one, two or three halo substituents.
- a haloethyl or halophenyl group may contain one, two, three, four or five halo substituents.
- fluoromethyl refers to a methyl group substituted with one, two or three fluoro groups.
- halo-substituted it is to be understood that the group in question is substituted with one or more halo groups independently selected from fluoro, chloro, bromo and iodo.
- the maximum number of halo substituents is limited only by the number of hydrogen atoms available for substitution on the group said to be halo-substituted.
- a halo-substituted methyl group may contain one, two or three halo substituents.
- a halo-substituted ethyl or halo-substituted phenyl group may contain one, two, three, four or five halo substituents.
- any reference to an element is to be considered a reference to all isotopes of that element.
- any reference to hydrogen is considered to encompass all isotopes of hydrogen including deuterium and tritium.
- any reference to a compound or group is to be considered a reference to all tautomers of that compound or group.
- -CH 2 - is replaced by -NH-, -O- or -S-;
- -CH3 is replaced by -NH2, -OH or -SH;
- methoxy, dimethylamino and aminoethyl groups are considered to be hydrocarbyl groups including one or more heteroatoms N, O or S in their carbon skeleton.
- the compounds of the invention contain no more than one quaternary ammonium group. More typically, the compounds of the invention contain no quaternary ammonium groups.
- a C x -C y group is defined as a group containing from x to y carbon atoms.
- a C1-C4 alkyl group is defined as an alkyl group containing from 1 to 4 carbon atoms.
- optional substituents are not taken into account when calculating the total number of carbon atoms in the parent group substituted with the optional substituents.
- replacement heteroatoms e.g. N, O or S, are not to be counted as carbon atoms when calculating the number of carbon atoms in a C x -C y group.
- a morpholinyl group is to be considered a C4 heterocyclic group, not a Ce heterocyclic group.
- hydrocarbyl group saturated or unsaturated hydrocarbyl group
- R 1 and R 2 are each independently selected from hydrogen or a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, and wherein the hydrocarbyl group may optionally include one, two, three or four heteroatoms each independently selected from N and O in its carbon skeleton.
- R 1 may be a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, and wherein the hydrocarbyl group may optionally include one, two, three or four heteroatoms each independently selected from N and O in its carbon skeleton, and R 2 may be selected from hydrogen or a C1-C4 alkyl or C1-C4 haloalkyl group.
- R 1 and R 2 are each independently selected from hydrogen or a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO? groups, and wherein the hydrocarbyl group may optionally include one, two or three heteroatoms each independently selected from N and O in its carbon skeleton.
- R 1 may be a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, and wherein the hydrocarbyl group may optionally include one, two or three heteroatoms each independently selected from N and O in its carbon skeleton, and R 2 may be selected from hydrogen or a C1-C4 alkyl or C1-C4 haloalkyl group.
- R 1 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted
- R 2 is selected from hydrogen or a methyl or fluoromethyl group.
- -NR X R 2 may have the formula -NMe2.
- R 1 is a C2-C8 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups, wherein the hydrocarbyl group includes one or two heteroatoms each independently selected from N and O in its carbon skeleton, and R 2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group.
- R 1 may be selected from a -(C(R 101 ) 2 )2-X 10 -R 102 or -(C(R 101 )2)2-X 10 -(C(R 101 )2)2-X 11 -R 102 group
- R 2 may be selected from hydrogen or a methyl or fluoromethyl group, wherein : X 10 is selected from O or NR 103 ;
- X 11 is selected from O or NR 104 ; each R 101 is hydrogen; R 102 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted;
- R 103 is selected from hydrogen or a methyl or fluoromethyl group
- R 104 is selected from hydrogen or a methyl or fluoromethyl group; or a single R 101 and R 103 , or a single R 101 and R 104 , or R 103 and R 104 together form a -(CH2)2- group; provided that any -(C(R 101 ) 2 )2-X 10 -R 102 or -(C(R 101 )2)2-X 10 -(C(R 101 )2)2-X 11 -R 102 group contains no more than 8 carbon atoms.
- -NR X R 2 has a formula selected from :
- R 1 has the formula -U-R 10 , wherein L 1 is a C1-C2 alkylene or C1-C2 fluoroalkylene group, and R 10 is a 5- or 6-membered heteroaryl group, such as an imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, thiazolyl or isothiazolyl group, and R 2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group. Typically in such an embodiment, R 2 is selected from hydrogen or a methyl or fluoromethyl group.
- -NR X R 2 has a formula selected from :
- the resultant cyclic group is a heterocyclic group.
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 4- to 7-membered monocyclic group, typically the monocyclic group is a saturated monocyclic group.
- -NR/R 2 may have the formula: wherein : n is 1 or 2; m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10; each R 11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R 11 are selected from a methyl or fluoromethyl group;
- X 12 is O or NR 12 ;
- n 0.
- X 12 is O.
- -NR X R 2 may have the formula :
- X 12 is NR 12 .
- R 12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 120 group, wherein R 120 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- R 12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group.
- R 12 may be selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl or C3-C4 fluorocycloalkyl group.
- R 12 is selected from hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- R 12 is selected from hydrogen or a methyl or fluoromethyl group.
- -NRlR 2 has a formula selected from :
- R 1 and R 2 together with the nitrogen atom to which they are attached form an azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group, wherein the azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group is substituted with an -NR 13 R 14 group such that the nitrogen atom of the -NR 13 R 14 group is not directly attached to a carbon atom that in turn is directly attached to the ring nitrogen atom of the azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group, wherein R 13 and R 14 are each independently selected from hydrogen or a methyl or fluoromethyl group, and wherein the azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group may optionally be further substituted with one or more fluoro groups and/or with one, two, three or four
- R 1 and R 2 together with the nitrogen atom to which they are attached form a pyrrolidinyl or piperidinyl group, wherein the pyrrolidinyl or piperidinyl group is substituted with an -NR 13 R 14 group such that the nitrogen atom of the -NR 13 R 14 group is not directly attached to a carbon atom that in turn is directly attached to the ring nitrogen atom of the pyrrolidinyl or piperidinyl group, wherein R 13 and R 14 are each independently selected from hydrogen or a methyl or fluoromethyl group.
- -NR X R 2 has the formula:
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 8- to 10-membered fused bicyclic group, such that the nitrogen atom of -NR X R 2 is a ring atom of a first 5- or 6-membered ring of the fused bicyclic group, and the first 5- or 6-membered ring is fused to a second 5- or 6- membered ring of the fused bicyclic group.
- the first 5- or 6-membered ring is not aromatic and is unsubstituted
- the second 5- or 6-membered ring is an unsubstituted 5- membered heteroaryl ring comprising a NH group.
- -NR X R 2 has the formula:
- the first 5- or 6-membered ring is saturated and the second 5- or 6- membered ring is saturated.
- the second 5- or 6-membered ring comprises at least one ring nitrogen atom.
- said ring nitrogen atom is not directly attached to a sp 2 hybridised carbon atom.
- the first 5- or 6-membered ring is saturated and the second 5- or 6-membered ring is saturated.
- R 1 and R 2 may together with the nitrogen atom to which they are attached form a 8- to 10- membered saturated fused bicyclic group, such that the nitrogen atom of -NR X R 2 is a ring atom of a first 5- or 6-membered ring of the fused bicyclic group, wherein the first 5- or 6-membered ring is fused to a second 5- or 6-membered ring of the fused bicyclic group, wherein the second 5- or 6-membered ring comprises at least one ring nitrogen atom, and wherein the fused bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, -OH, -NH2, or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 121 group,
- fused bicyclic group is substituted, it is substituted with one or more substituents each independently selected from a fluoro, -OH, -NH2, or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl or C3-C4 fluorocycloalkyl group.
- substituents each independently selected from a fluoro, -OH, -NH2, or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl or C3-C4 fluorocycloalkyl group.
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group, wherein R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; and each R 16 is independently selected from a methyl or fluoromethyl group.
- j is 1 or 2 and k is 1 or 2. More typically, j is 1 and k is 1.
- p is 0, 1 or 2 and q is 1 or 2. More typically, p is 1 or 2 and q is 1 or 2. Typically in such an embodiment, r is 0 and s is 0.
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group, wherein R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically, R 15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- -NR X R 2 may have a formula selected from :
- -NR X R 2 has the formula : wherein : r is 0, 1 or 2; s is 0, 1 or 2; t is 1 or 2; and each R 16 is independently selected from a methyl or fluoromethyl group.
- r is 0 and s is 0.
- t is 1.
- -NRlR 2 may have the formula:
- j is 1 or 2 and k is 1 or 2. More typically, j is 1 and k is 1.
- v is 1.
- r is 0 and s is 0.
- -NR X R 2 may have the formula:
- a first 5- or 6-membered ring is fused to a second 5- or 6-membered ring across two sp 3 hybridised ring carbon atoms, e.g. across two ring carbon atoms in a saturated fused bicyclic ring system
- the second ring may be fused cis- or trans- to the first ring.
- -NR X R 2 may have the formula:
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 6- to 12-membered bicyclic group
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 6- to 12-membered spiro bicyclic group, such that the nitrogen atom of -NR X R 2 is a ring atom of a first 4- to 7- membered ring of the spiro bicyclic group, and the first 4 to 7-membered ring shares a spiro ring atom with a second 3- to 7-membered ring of the spiro bicyclic group.
- the first 4- to 7-membered ring is saturated and the second 3- to 7-membered ring is saturated.
- the second 3- to 7-membered ring is a 4- to 7- membered ring that comprises at least one ring nitrogen or ring oxygen atom.
- said ring nitrogen or ring oxygen atom is not directly attached to a sp 2 hybridised carbon atom.
- the second 4- to 7-membered ring comprises at least one ring nitrogen atom or at least one ring oxygen atom, the first 4- to 7- membered ring is saturated and the second 4- to 7-membered ring is saturated.
- -NR X R 2 has the formula: wherein :
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group, wherein R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; and each R 16 is independently selected from a methyl or fluoromethyl group.
- j is 1 or 2 and k is 1 or 2.
- p is 0, 1 or 2 and q is 1, 2 or 3. More typically, p is 0, 1 or 2 and q is 2 or 3.
- r is 0 and s is 0.
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, Ci- C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically, R 15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically still, R 15 is hydrogen or a methyl or fluoromethyl group.
- -NR X R 2 may have a formula selected from :
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group; and each R 16 is independently selected from a methyl or fluoromethyl group.
- j is 1 or 2 and k is 1 or 2.
- p is 1 or 2 and q is 1 or 2.
- r is 0 and s is 0.
- R 15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically, R 15 is hydrogen or a methyl or fluoromethyl group. More typically still, R 15 is hydrogen.
- -NR X R 2 may have the formula:
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 6- to 12-membered bicyclic group
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 7- to 9-membered bridged bicyclic group.
- the 7- to 9-membered bridged bicyclic group is saturated.
- the 7- to 9-membered bridged bicyclic group comprises a least one further ring nitrogen or ring oxygen atom.
- said further ring nitrogen or ring oxygen atom is not directly attached to a sp 2 hybridised carbon atom.
- the 7- to 9-membered bridged bicyclic group comprises a least one further ring nitrogen or ring oxygen atom, the 7- to 9-membered bridged bicyclic group is saturated.
- -NR X R 2 has the formula: wherein : w is 1 or 2;
- X 15 is O or NR 15 ;
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group, wherein R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; one R 17 and one R 18 together form a -CH2- or -CH2CH2- group; and each remaining R 17 and R 18 is hydrogen.
- w is 1.
- X 15 is NR 15 .
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, Ci- C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically, R 15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically still, R 15 is hydrogen or a methyl or fluoromethyl group. Yet more typically, R 15 is a methyl or fluoromethyl group. Typically in such an embodiment, one R 17 and one R 18 together form a -CH2CH2- group.
- -NR X R 2 may have the formula:
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises:
- the carbon atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a sp 2 hybridised carbon atom. More typically, the carbon atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is the carbon atom of a carbonyl group. More typically still, the carbon atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is the carbon atom of an amide group.
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp 2 hybridised carbon atom.
- the C1-C12 monovalent group comprises a primary amine
- the nitrogen atom of the primary amine is directly attached to a sp 3 hybridised carbon atom.
- the C1-C12 monovalent group comprises a secondary amine
- the nitrogen atom of the secondary amine is directly attached to two sp 3 hybridised carbon atoms.
- R 3 has the formula: wherein :
- the compound is a compound of Formula (II) :
- R 31 is hydrogen
- L 3 is not a bond.
- R 31 is hydrogen
- L 3 is not a bond and R 31 is not hydrogen.
- R 3 has the formula : wherein :
- R 31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups. More typically in such an embodiment, R 31 is hydrogen or a methyl or fluoromethyl group. More typically still, R 31 is hydrogen.
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups.
- R 32 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 .
- R 31 and R 32 together form a C3-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single group R 33 .
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 .
- L 3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 .
- each R L3 is independently selected from a methyl or a fluoromethyl group, or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 , or any R L3 and any R 33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 .
- each R L3 is independently selected from a methyl or a fluoromethyl group, or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 , or any R L3 and any R 33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 .
- R 3 has the formula : wherein :
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; each R L3 is independently selected from a methyl or a fluoromethyl group, or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 , or any R L3 and any R 33 together form a bond or a
- L 3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group, or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 , or any R L3 and any R 33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 .
- R 31 is hydrogen.
- R 31 is not hydrogen.
- R 3 has the formula: wherein :
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; each R L3 is independently selected from a methyl or a fluoromethyl group, or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 , or any R L3 and any R 33 together form a bond or a
- L 3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group, or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 , or any R L3 and any R 33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 .
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 31 is hydrogen
- R 3 may have the formula :
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group R L3 , and wherein the alkylene group may optionally be further substituted with one or more fluoro groups; R L3 and R 31 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; and each R 34 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 3 may have the formula:
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-NH-CH2CH2- group, wherein the alkylene or the -CH2CH2-NH-CH2CH2- group is substituted with one or two groups R L3 , and wherein the alkylene or the -CH2CH2-NH-CH2CH2- group may optionally be further substituted with one or more fluoro groups; one R L3 and R 32 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; the second R L3 , if present, is selected from a methyl or a fluoromethyl group; and each R 34 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 3 may have the formula:
- R 31 is hydrogen
- L 3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group R L3 , and wherein the alkylene group may optionally be further substituted with one or more fluoro groups.
- R 3 may have the formula -CH2-R 30 , wherein R 30 is a pyrrolidin-2- yl, pyrrolidin-3-yl, piperidin-2-yl, piperidin-3-yl or piperidin-4-yl group.
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group is substituted with two groups R L3 , and wherein the alkylene group may optionally be substituted with one or more fluoro groups; and the two groups R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 31 is hydrogen
- R 3 may have the formula:
- R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group is substituted with one group R 33 , and wherein the alkylene group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group R L3 , and wherein the alkylene group may optionally be further substituted with one or more fluoro groups;
- R L3 and R 33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be further substituted with one or more fluoro groups; provided that the group R 3 contains no more than 12 carbon atoms.
- R 3 may have the formula:
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp 2 hybridised carbon atom.
- the oxygen atom of the -OH group is directly attached to a sp 3 hybridised carbon atom.
- R 3 may have the formula: wherein :
- the compound is a compound of Formula (III):
- R 41 is hydrogen
- R 41 is not hydrogen
- R 41 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups. More typically in such an embodiment, R 41 is hydrogen or a methyl or fluoromethyl group. More typically still, R 41 is hydrogen.
- L 4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L4 .
- L 4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L4 .
- each R L4 is independently selected from a methyl or a fluoromethyl group, or any two R L4 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L4 and R 41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 44 .
- each R L4 is independently selected from a methyl or a fluoromethyl group, or any R L4 and R 41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 44 .
- R 3 has the formula: wherein :
- L 4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L4 ; each R L4 is independently selected from a methyl or a fluoromethyl group, or any two R L4 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L4 and R 41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 44 ; and each R 44 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains
- L 4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L4 ; and each R L4 is independently selected from a methyl or a fluoromethyl group, or any R L4 and R 41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 44 .
- R 41 is hydrogen
- R 41 is not hydrogen
- L 4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L4 ; and each R L4 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 41 is hydrogen
- R 3 may have the formula:
- L 4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group R L4 , and wherein the alkylene group may optionally be further substituted with one or more fluoro groups;
- R L4 and R 41 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 44 ; and each R 44 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 3 may have the formula:
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp 2 hybridised carbon atom.
- the C1-C12 monovalent group comprises a -SH group
- the sulphur atom of the -SH group is directly attached to a sp 3 hybridised carbon atom.
- R 3 may have the formula: wherein :
- the compound is a compound of Formula (IV) :
- R 51 is hydrogen
- R 51 is not hydrogen.
- R 51 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups. More typically in such an embodiment, R 51 is hydrogen or a methyl or fluoromethyl group. More typically still, R 51 is hydrogen.
- L 5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L5 .
- L 5 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L5 .
- each R L5 is independently selected from a methyl or a fluoromethyl group, or any two R L5 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L5 and R 51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 54 .
- each R L5 is independently selected from a methyl or a fluoromethyl group, or any R L5 and R 51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 54 .
- R 3 has the formula : wherein :
- L 5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L5 ; each R L5 is independently selected from a methyl or a fluoromethyl group, or any two R L5 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or
- L 5 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L5 ; and each R L5 is independently selected from a methyl or a fluoromethyl group, or any R L5 and R 51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 54 .
- R 51 is hydrogen
- R 51 is not hydrogen
- L 5 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L5 ; and each R L5 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 51 is hydrogen.
- R 3 may have the formula:
- X 1 is N, C-H, C-Hal or C-R X1 ;
- X 2 is N
- X 3 is N, C-H, C-Hal or C-R X3 ;
- X 4 is N or C; provided that no more than three of X 1 , X 2 , X 3 and X 4 are N;
- X 1 , X 2 , X 3 and X 4 are N.
- X 1 is N, C-H, C-Hal or C-R X1 ;
- X 2 is N
- X 3 is N, C-H, C-Hal or C-R X3 ;
- X 4 is C; provided that no more than two of X 1 , X 2 and X 3 are N.
- X 1 is N, C-H, C-Hal or C-R X1 ;
- X 2 is N
- X 3 is C-H, C-Hal or C-R X3 ; and X 4 is C.
- R X1 and R X3 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2 or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton.
- X 1 is N, C-H or C-Hal
- X 2 is N
- X 3 is N, C-H or C-Hal; and X 4 is N or C; provided that no more than three of X 1 , X 2 , X 3 and X 4 are N. Typically in such an embodiment, no more than two of X 1 , X 2 , X 3 and X 4 are N.
- X 1 is N, C-H or C-Hal
- X 2 is N
- X 3 is N, C-H or C-Hal; and X 4 is C; provided that no more than two of X 1 , X 2 and X 3 are N.
- X 1 is N, C-H or C-Hal
- X 2 is N
- X 3 is C-H or C-Hal; and X 4 is C. Yet more typically:
- X 1 is N or C-H
- X 2 is N
- X 3 is C-H
- X 4 is C.
- X 1 is N
- X 2 is N
- X 3 is C-H, C-Hal or C-R X3 ;
- X 4 is C.
- X 3 is C-H or C-Hal. More typically, X 3 is C-H.
- Q 1 is O, S, N, N-H, N-R Q1 , C-H, C-Hal, or C-R « 2 ;
- R Q1 and R Q2 are each independently selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R Q3 group, wherein R Q3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- R Q1 and R Q2 are each independently selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically still, R Q1 and R Q2 are each independently selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. Yet more typically, R Q1 and R Q2 are each independently selected from a methyl or fluoromethyl group.
- Q 1 is O, S, N-H, N-R Q1 , C-H, C-Hal, or C-R Q2 . More typically, Q 1 is O, S, N-H or N-R Q1 .
- Q 1 may be O, S, N-H or N-R Q1 , wherein R Q1 is selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R Q3 group, wherein R Q3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
- Q 1 is S, N-H or N-R Q1 .
- R Q1 is a methyl or fluoromethyl group.
- Q 1 is S.
- Q 1 is O.
- Q 1 is N-H or N-R Q1 , wherein R Q1 is a methyl or fluoromethyl group. Typically in such an embodiment, Q 1 is N-H.
- a 1 is N, C-H, C-Hal or C-R A1 ;
- a 2 is N, C-H, C-Hal or C-R A2 ;
- a 3 is N, C-H, C-Hal or C-R A3 ;
- a 4 is N, C-H, C-Hal or C-R A4 ;
- a 5 is N or C; provided that no more than three of A 1 , A 2 , A 3 , A 4 and A 5 are N;
- no more than two of A 1 , A 2 , A 3 , A 4 and A 5 are N. More typically, no more than one of A 1 , A 2 , A 3 , A 4 and A 5 is N.
- a 5 is N
- X 4 is N
- a 6 is C and Q 1 is N, C-H, C-Hal, or C-R Q2 .
- a 5 is N
- X 4 is N
- a 6 is C and Q 1 is C-H, C-Hal, or C-R Q2 .
- a 5 is C.
- a 1 is N, C-H, C-Hal or C-R A1 ;
- a 2 is N, C-H, C-Hal or C-R A2 ;
- a 3 is N, C-H, C-Hal or C-R A3 ;
- a 4 is N, C-H, C-Hal or C-R A4 ;
- a 5 is C; provided that no more than two of A 1 , A 2 , A 3 and A 4 are N.
- no more than one of A 1 , A 2 , A 3 and A 4 is N.
- a 1 , A 2 , A 3 and A 4 is N, A 2 is N or A 3 is N. More typically, A 3 is N.
- a 1 is C-H C-Hal or C-R A1 ;
- a 2 is C-H, C-Hal or C-R A2 ;
- a 3 is C-H, C-Hal or C-R A3 ;
- a 4 is C-H, C-Hal or C-R A4 ;
- a 5 is C.
- no more than two of A 1 , A 2 , A 3 and A 4 are C-R A1 , C-R A2 , C-R A3 or C-R A4 . More typically, no more than one of A 1 , A 2 , A 3 and A 4 is C-R A1 , C-R A2 , C-R A3 or C-R A4 .
- R A1 , R A2 , R A3 and R A4 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2 or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton.
- a 1 is N, C-H or C-Hal
- a 2 is N, C-H or C-Hal
- a 3 is N, C-H or C-Hal
- a 4 is N, C-H or C-Hal
- a 5 is C; provided that no more than two of A 1 , A 2 , A 3 and A 4 are N.
- no more than one of A 1 , A 2 , A 3 and A 4 is N.
- a 1 , A 2 , A 3 and A 4 is N, A 2 is N or A 3 is N. More typically, A 3 is N.
- a 1 is C-H or C-Hal
- a 2 is C-H or C-Hal
- a 3 is C-H or C-Hal
- a 4 is C-H or C-Hal; and A 5 is C.
- a 1 is C-H
- a 2 is C-H
- a 3 is C-H
- a 4 is C-H
- a 5 is C.
- a 6 is N or C. Typically, A 6 is N.
- each Hal is independently selected from a fluoro, chloro, bromo or iodo group.
- each Hal is independently selected from a fluoro, chloro or bromo group.
- the compound is a compound of Formula (V) :
- the compound is a compound of Formula (VI) :
- the compound is a compound of Formula (VII) :
- the compound is a compound of Formula (VIII) :
- R 2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a sp 2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp 2 hybridised carbon atom; or
- R 3 is a C1-C12 monovalent group, wherein the atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is a sp 2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp 2 hybridised carbon atom;
- X 1 is N, C-H, C-Hal or C-R X1 ;
- X 2 is N
- X 3 is C-H, C-Hal or C-R X1 ;
- X 4 is C
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R Q3 group;
- R Q3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group;
- a 1 is N, C-H, C-Hal or C-R A1 ;
- a 2 is N, C-H, C-Hal or C-R A2 ;
- a 3 is N, C-H, C-Hal or C-R A3 ;
- a 4 is N, C-H, C-Hal or C-R A4 ;
- a 5 is C
- a 6 is N; and each Hal is independently selected from a fluoro, chloro or bromo group.
- the carbon atom of R 3 that is directly attached to the remainder of the compound of Formula (I) is the carbon atom of an amide group.
- R 3 has the formula : wherein :
- Q 1 is S or N-H.
- X I is N or C-H
- R Q1 is a methyl or fluoromethyl group
- R 1 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted; or
- R 1 has the formula -I -R 10 , wherein L 1 is a C1-C2 alkylene or C1-C2 fluoroalkylene group, and R 10 is a 5- or 6-membered heteroaryl group; or
- R 1 is selected from a -(C(R 101 )2)2-X 10 -R 102 or -(C(R 101 )2)2-X 10 -(C(R 101 )2)2-X 11 -R 102 group;
- X 10 is selected from O or NR 103 ;
- X II is selected from O or NR 104 ; each R 101 is hydrogen;
- R 102 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted;
- R 103 is selected from hydrogen or a methyl or fluoromethyl group
- R 104 is selected from hydrogen or a methyl or fluoromethyl group; or a single R 101 and R 103 , or a single R 101 and R 104 , or R 103 and R 104 together form a -(CH2)2- group; provided that any -(C(R 101 ) 2 )2-X 10 -R 102 or -(C(R 101 )2)2-X 10 -(C(R 101 )2)2-X 11 -R 102 group contains no more than 8 carbon atoms; R 2 is selected from hydrogen or a methyl or fluoromethyl group;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group
- n is 1 or 2
- m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10
- each R 11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R 11 are selected from a methyl or fluoromethyl group;
- X 12 is O or NR 12 ;
- R 12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 120 group;
- R 120 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group
- R 1 and R 2 together with the nitrogen atom to which they are attached form a pyrrolidinyl or piperidinyl group, wherein the pyrrolidinyl or piperidinyl group is substituted with an -NR 13 R 14 group such that the nitrogen atom of the -NR 13 R 14 group is not directly attached to a carbon atom that in turn is directly attached to the ring nitrogen atom of the pyrrolidinyl or piperidinyl group;
- R 13 and R 14 are each independently selected from hydrogen or a methyl or fluoromethyl group
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group
- R 1 and R 2 together with the nitrogen atom to which they are attached form a 8- or 9-membered fused bicyclic group, such that the nitrogen atom of -NR X R 2 is a ring atom of a first 5- or 6-membered ring of the fused bicyclic group, and the first 5- or 6- membered ring is fused to a second 5-membered ring of the fused bicyclic group, wherein the first 5- or 6-membered ring is not aromatic and is unsubstituted, and the second 5-membered ring is an unsubstituted 5-membered heteroaryl ring comprising a NH group;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group;
- R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; each R 16 is independently selected from a methyl or fluoromethyl group;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group; r is 0, 1 or 2; s is 0, 1 or 2; t is 1 or 2; each R 16 is independently selected from a methyl or fluoromethyl group;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group
- j is 0, 1, 2 or 3
- k is 0, 1, 2 or 3
- provided that j + k 2 or 3
- v is 1 or 2
- r is 0, 1 or 2
- s is 0, 1 or 2
- each R 16 is independently selected from a methyl or fluoromethyl group
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H;
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group;
- R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; each R 16 is independently selected from a methyl or fluoromethyl group;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group; w is 1 or 2;
- X 15 is O or NR 15 ;
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group;
- R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; one R 17 and one R 18 together form a -CH2- or -CH2CH2- group; each remaining R 17 and R 18 is hydrogen;
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R 31 and R 32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 33 ; each R 33 is independently selected from a methyl or a fluoromethyl group;
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; or any two R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any R L3 and R 31 , or any R L3 and R 32 , together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; or any R L3 and any R 33 together form a bond or
- Q 1 is S or N-H.
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 31 is hydrogen
- Q 1 is S or N-H
- R 31 is hydrogen
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R L3 ; and each R L3 is independently selected from a methyl or a fluoromethyl group.
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-NH-CH2CH2- group, wherein the alkylene or the -CH2CH2-NH-CH2CH2- group is substituted with one or two groups R L3 , and wherein the alkylene or the -CH2CH2-NH-CH2CH2- group may optionally be further substituted with one or more fluoro groups; one R L3 and R 32 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; the second R L3 , if present, is selected from a methyl or a fluoromethyl group; and each R 34 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 31 is hydrogen
- L 3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-NH-CH2CH2- group, wherein the alkylene or the -CH2CH2-NH-CH2CH2- group is substituted with one or two groups R L3 , and wherein the alkylene or the -CH2CH2-NH-CH2CH2- group may optionally be further substituted with one or more fluoro groups; one R L3 and R 32 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 34 ; the second R L3 , if present, is selected from a methyl or a fluoromethyl group; and each R 34 is independently selected from a methyl or a fluoromethyl group; provided that the group R 3 contains no more than 12 carbon atoms.
- L 3 is a C2-C5 straight-chained alkylene group, wherein the alkylene group is substituted with one or two groups R L3 , and wherein the alkylene group may optionally be further substituted with one or more fluoro groups; and the one R L3 and R 32 together with the atoms of the L 3 -NH group to which they are attached form a pyrrolidinyl or piperidinyl group.
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group is substituted with two groups R L3 , and wherein the alkylene group may optionally be substituted with one or more fluoro groups; and the two groups R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; provided that the group R 3 contains no more than 12 carbon atoms.
- R 31 is hydrogen.
- VIb Formula (VIb) of the sixth exemplary embodiment wherein:
- Q 1 is S or N-H
- R 31 is hydrogen
- R 32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
- L 3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group is substituted with two groups R L3 , and wherein the alkylene group may optionally be substituted with one or more fluoro groups; and the two groups R L3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; provided that the group R 3 contains no more than 12 carbon atoms.
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R Q1 is a methyl or fluoromethyl group
- n is 1 or 2
- m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10
- each R 11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R 11 are selected from a methyl or fluoromethyl group;
- X 12 is O or NR 12 ;
- R 12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 120 group;
- R 120 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group;
- L 4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L4 ; each R L4 is independently selected from a methyl or a fluoromethyl group, or any two R L4 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L4 and R 41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 44 ; and each R 44 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO
- X 1 is N or C-H
- Q 1 is O, S, N-H or N-R Q1 ;
- R 15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R 150 group;
- R 150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; each R 16 is independently selected from a methyl or fluoromethyl group;
- L 5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups R L5 ; each R L5 is independently selected from a methyl or a fluoromethyl group, or any two R L5 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any R L5 and R 51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R 54 ; and each R 54 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO
- Q 1 is S or N-H.
- the compound of the first aspect of the invention has a molecular weight of from 300 to 1000 Da. Typically, the compound of the first aspect of the invention has a molecular weight of from 350 to 750 Da. More typically, the compound of the first aspect of the invention has a molecular weight of from 400 to 600 Da.
- a second aspect of the invention provides a compound selected from the group consisting of:
- a third aspect of the invention provides a pharmaceutically acceptable salt and/or solvate and/or prodrug of any compound of the first or second aspect of the invention.
- the third aspect of the invention provides a pharmaceutically acceptable salt and/or solvate of any compound of the first or second aspect of the invention.
- the third aspect of the invention may provide (i) a pharmaceutically acceptable salt of any compound of the first or second aspect of the invention, or (ii) a pharmaceutically acceptable solvate of any compound of the first or second aspect of the invention, or (iii) a pharmaceutically acceptable solvate of a pharmaceutically acceptable salt of any compound of the first or second aspect of the invention.
- a "salt" of a compound of the present invention includes an acid addition salt.
- Acid addition salts are preferably pharmaceutically acceptable, non-toxic addition salts with suitable acids, including but not limited to inorganic acids such as hydrohalogenic acids (for example, hydrofluoric, hydrochloric, hydrobromic or hydroiodic acid) or other inorganic acids (for example, nitric, perchloric, sulfuric or phosphoric acid); or organic acids such as organic carboxylic acids (for example, propionic, butyric, glycolic, lactic, mandelic, citric, acetic, trifluoroacetic, benzoic, salicylic, succinic, malic or hydroxysuccinic, tartaric, fumaric, maleic, hydroxymaleic, mucic or galactaric, gluconic, pantothenic or pamoic acid), organic sulfonic acids (for example
- a compound of the invention typically includes a quaternary ammonium group, typically the compound is used in its salt form.
- the counter ion to the quaternary ammonium group may be any pharmaceutically acceptable, non-toxic counter ion. Examples of suitable counter ions include the conjugate bases of the protic acids discussed above in relation to acid addition salts.
- a "salt" of a compound of the present invention includes one formed between a protic acid functionality (such as a carboxylic acid group) of a compound of the present invention and a suitable cation. Suitable cations include, but are not limited to lithium, sodium, potassium, magnesium, calcium and ammonium.
- the salt may be a mono-, di-, tri- or multi-salt.
- the salt is a mono- or di-lithium, sodium, potassium, magnesium, calcium or ammonium salt. More preferably the salt is a mono-sodium salt or a monopotassium salt.
- any salt is a pharmaceutically acceptable non-toxic salt.
- other salts are included in the present invention, since they have potential to serve as intermediates in the purification or preparation of other, for example, pharmaceutically acceptable salts, or are useful for identification, characterisation or purification of the free acid or base.
- the compounds and/or salts of the present invention may be anhydrous or in the form of a hydrate (e.g. a hemihydrate, monohydrate, dihydrate or trihydrate) or other solvate.
- Such other solvates may be formed with common organic solvents, including but not limited to, alcoholic solvents e.g. methanol, ethanol or isopropanol.
- the third aspect of the invention provides a prodrug of any compound of the first or second aspect of the invention.
- the third aspect of the invention may provide a pharmaceutically acceptable salt and/or solvate of such a prodrug.
- the third aspect of the invention may provide (i) a pharmaceutically acceptable salt of a prodrug, or (ii) a pharmaceutically acceptable solvate of a prodrug, or (iii) a pharmaceutically acceptable solvate of a pharmaceutically acceptable salt of a prodrug.
- prodrugs are compounds which, when administered to a subject such as a human, are converted in whole or in part to a compound of the invention.
- the prodrugs are pharmacologically inert chemical derivatives that can be converted in vivo to the active drug molecules to exert a therapeutic effect. Any of the compounds described herein can be administered as a prodrug to increase the activity, bioavailability, or stability of the compound or to otherwise alter the properties of the compound.
- Typical examples of prodrugs include compounds that have biologically labile protecting groups on a functional moiety of the active compound.
- Prodrugs include, but are not limited to, compounds that can be oxidized, reduced, aminated, deaminated, hydroxylated, dehydroxylated, hydrolyzed, dehydrolyzed, alkylated, dealkylated, acylated, deacylated, phosphorylated, and/or dephosphorylated to produce the active compound.
- the present invention also encompasses salts and solvates of such prodrugs as described above.
- the compounds, salts, solvates and prodrugs of the present invention may be obtained in all grades of purity, for example via conventional techniques such as recrystallisation and/or column chromatography.
- the compounds, salts, solvates and prodrugs of the present invention may be at least 90% pure, at least 95% pure, at least 99% pure, at least 99.5% pure or at least 99.9% pure, as measured by HPLC.
- the compounds, salts, solvates and prodrugs of the present invention may be at least 90% pure, at least 95% pure, at least 99% pure, at least 99.5% pure or at least 99.9% pure, as measured by LCMS.
- the compounds, salts, solvates and prodrugs of the present invention may be at least 90% pure, at least 95% pure, at least 99% pure, at least 99.5% pure or at least 99.9% pure, as measured by X H NMR.
- the compounds, salts, solvates and prodrugs of the present invention may contain at least one chiral centre.
- the compounds, salts, solvates and prodrugs may therefore exist in at least two isomeric forms.
- the present invention encompasses racemic mixtures of the compounds, salts, solvates and prodrugs of the present invention as well as enantiomerically enriched and substantially enantiomerically pure isomers.
- a "substantially enantiomerically pure" isomer of a compound comprises less than 5% of other isomers of the same compound, more typically less than 2%, and most typically less than 0.5% by weight.
- the compounds, salts, solvates and prodrugs of the present invention may contain any stable isotope including, but not limited to 12 C, 13 C, 1 H, 2 H (D), 14 N, 15 N, 16 O, 17 O, 18 O, 19 F and 127 I, and any radioisotope including, but not limited to X1 C, 14 C, 3 H (T), 13 N, 15 O, 18 F, 123 I, 124 I, 125 I and 131 I.
- the compounds, salts, solvates and prodrugs of the present invention may be in any polymorphic or amorphous form.
- a fourth aspect of the invention provides an antibody-drug conjugate comprising a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention.
- the compound, salt, solvate or prodrug needs to lose at least one atom such as a hydrogen atom in order to form the link to the antibody.
- the compound, salt, solvate or prodrug of the present invention comprises a primary or a secondary amine, a -OH group, or a -SH group, each of which can be used to link the compound, salt, solvate or prodrug to an antibody, with the loss of a hydrogen atom from the amine, -OH or -SH group.
- the antibody-drug conjugate can have the Formula (IIA), (IIIA) or (IVA) :
- Typical antibodies that may be used to prepare the antibody-drug conjugate of the fourth aspect of the invention are:
- the antibody AB may be selected from any of the above.
- the linker L AB comprises a maleimide moiety, one or more PEG spacers, optionally a BCN moiety, a valine-citrulline (Val-Cit) dipeptide, and a paraaminobenzyl (PAB) spacer.
- the hydrocarbylene group of linker L AB has a chain length of from 20 to 80 atoms. More typically, the hydrocarbylene group has a chain length of from 30 to 70 atoms, or from 40 to 60 atoms.
- chain length of a hydrocarbylene group refers to the number of atoms of the hydrocarbylene group that are bonded to each other in a continuous chain between the two points of attachment of the hydrocarbylene group to the remainder of the molecule, as measured by the shortest route.
- structure (C) has a chain length between A and B of 3 atoms
- structure (D) has a chain length between A and B of 5 atoms:
- Typical linkers that may be used to link a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, to an antibody to prepare the antibody-drug conjugate of the fourth aspect of the invention are: maleimide-valine-citruline-PABC, including those comprising PEG and/or a
- the linker L AB may be selected from any of the above.
- the antibody-drug conjugate is selected from :
- a fifth aspect of the invention provides a pharmaceutical composition
- a pharmaceutical composition comprising a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, and a pharmaceutically acceptable excipient.
- compositions of the invention are those conventionally employed in the field of pharmaceutical formulation, and include, but are not limited to, sugars, sugar alcohols, starches, ion exchangers, alumina, aluminium stearate, lecithin, serum proteins such as human serum albumin, buffer substances such as phosphates, glycerine, sorbic acid, potassium sorbate, partial glyceride mixtures of saturated vegetable fatty acids, water, salts or electrolytes such as protamine sulfate, disodium hydrogen phosphate, potassium hydrogen phosphate, sodium chloride, zinc salts, colloidal silica, magnesium trisilicate, polyvinylpyrrolidone, cellulose-based substances, polyethylene glycol, sodium carboxymethylcellulose, polyacrylates, waxes, polyethylene-polyoxypropylene-block polymers, polyethylene glycol and wool fat.
- a sixth aspect of the invention provides a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, for use in medicine, and/or for use in the treatment or prevention of a disease, disorder or condition.
- the use comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition to a subject.
- treatment refers equally to curative therapy, and ameliorating or palliative therapy. The term includes obtaining beneficial or desired physiological results, which may or may not be established clinically.
- Beneficial or desired clinical results include, but are not limited to, the alleviation of symptoms, the prevention of symptoms, the diminishment of extent of disease, the stabilisation (i.e., not worsening) of a condition, the delay or slowing of progression/worsening of a condition/symptom, the amelioration or palliation of a condition/symptom, and remission (whether partial or total), whether detectable or undetectable.
- prevention means that the extent and/or undesirable manifestations of a physiological condition or symptom are lessened and/or time course of the progression is slowed or lengthened, as compared to not administering a compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition of the present invention.
- prevention as used herein in relation to a disease, disorder or condition, relates to prophylactic or preventative therapy, as well as therapy to reduce the risk of developing the disease, disorder or condition.
- prevention includes both the avoidance of occurrence of the disease, disorder or condition, and the delay in onset of the disease, disorder or condition.
- any statistically significant (p ⁇ 0.05) avoidance of occurrence, delay in onset or reduction in risk as measured by a controlled clinical trial may be deemed a prevention of the disease, disorder or condition.
- Subjects amenable to prevention include those at heightened risk of a disease, disorder or condition as identified by genetic or biochemical markers. Typically, the genetic or biochemical markers are appropriate to the disease, disorder or condition under consideration.
- a seventh aspect of the invention provides the use of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, in the manufacture of a medicament for the treatment or prevention of a disease, disorder or condition.
- the treatment or prevention comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or medicament to a subject.
- An eighth aspect of the invention provides a method of treatment or prevention of a disease, disorder or condition, the method comprising the step of administering an effective amount of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, to thereby treat or prevent the disease, disorder or condition.
- the administration is to a subject in need thereof.
- a ninth aspect of the invention provides a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, for use in the treatment or prevention of a cancer.
- the use comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition to a subject.
- a tenth aspect of the invention provides the use of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, in the manufacture of a medicament for the treatment or prevention of a cancer.
- the treatment or prevention comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or medicament to a subject.
- An eleventh aspect of the invention provides a method of treatment or prevention of a cancer, the method comprising the step of administering an effective amount of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, to thereby treat or prevent the cancer.
- the administration is to a subject in need thereof.
- the compound of the first or second aspect of the invention, or the pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or the antibody-drug conjugate of the fourth aspect of the invention, or the pharmaceutical composition of the fifth aspect of the invention can be combined with other therapeutic agents and treatments, for example, to exploit synergies and enhance the cytotoxic activity in cancer treatment.
- the compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition can used in combination with X-ray radiation; DNA alkylating agents like cisplatin; NU7441, an inhibitor of DNA repair regulating kinase DNA-PK; MK1775, an inhibitor of the cell cycle regulator WEE1 kinase; Pimozide, an inhibitor of the deubiquitinylation enzyme USP1; NSC697923, an inhibitor of ubiquitin conjugating enzyme UBE2N; APR-246, a P53 activator; PAR.P inhibitors; topoisomerase 1 knockdown; HDAC inhibitors; lysosome inhibitors; and immunomodulators.
- DNA alkylating agents like cisplatin
- NU7441 an inhibitor of DNA repair regulating kinase DNA-PK
- MK1775 an inhibitor of the cell cycle regulator WEE1 kinase
- Pimozide an inhibitor of the deubiquitinylation enzyme USP1
- the subject may be any human or other animal.
- the subject is a mammal, more typically a human or a domesticated mammal such as a cow, pig, lamb, sheep, goat, horse, cat, dog, rabbit, mouse etc. Most typically, the subject is a human.
- any of the medicaments employed in the present invention can be administered by oral, parenteral (including intravenous, subcutaneous, intramuscular, intradermal, intratracheal, intraperitoneal, intraarticular, intracranial and epidural), airway (aerosol), rectal, vaginal, ocular or topical (including transdermal, buccal, mucosal, sublingual and topical ocular) administration.
- the mode of administration selected is that most appropriate to the disorder, disease or condition to be treated or prevented.
- the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the present invention will generally be provided in the form of tablets, capsules, hard or soft gelatine capsules, caplets, troches or lozenges, as a powder or granules, or as an aqueous solution, suspension or dispersion.
- Tablets for oral use may include the active ingredient mixed with pharmaceutically acceptable excipients such as inert diluents, disintegrating agents, binding agents, lubricating agents, sweetening agents, flavouring agents, colouring agents and preservatives.
- Suitable inert diluents include sodium and calcium carbonate, sodium and calcium phosphate, and lactose.
- Corn starch and alginic acid are suitable disintegrating agents.
- Binding agents may include starch and gelatine.
- the lubricating agent if present, may be magnesium stearate, stearic acid or talc.
- the tablets may be coated with a material, such as glyceryl monostearate or glyceryl distearate, to delay absorption in the gastrointestinal tract. Tablets may also be effervescent and/or dissolving tablets.
- Capsules for oral use include hard gelatine capsules in which the active ingredient is mixed with a solid diluent, and soft gelatine capsules wherein the active ingredient is mixed with water or an oil such as peanut oil, liquid paraffin or olive oil.
- Powders or granules for oral use may be provided in sachets or tubs.
- Aqueous solutions, suspensions or dispersions may be prepared by the addition of water to powders, granules or tablets.
- Any form suitable for oral administration may optionally include sweetening agents such as sugar, flavouring agents, colouring agents and/or preservatives.
- Formulations for rectal administration may be presented as a suppository with a suitable base comprising, for example, cocoa butter or a salicylate.
- Formulations suitable for vaginal administration may be presented as pessaries, tampons, creams, gels, pastes, foams or spray formulations containing in addition to the active ingredient such carriers as are known in the art to be appropriate.
- the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the present invention will generally be provided in a sterile aqueous solution or suspension, buffered to an appropriate pH and isotonicity.
- Suitable aqueous vehicles include Ringer's solution and isotonic sodium chloride or glucose.
- Aqueous suspensions according to the invention may include suspending agents such as cellulose derivatives, sodium alginate, polyvinylpyrrolidone and gum tragacanth, and a wetting agent such as lecithin.
- Suitable preservatives for aqueous suspensions include ethyl and n-propyl p-hydroxybenzoate.
- the compounds of the invention may also be presented as liposome formulations.
- the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the invention will generally be provided in a form suitable for topical administration, e.g. as eye drops.
- suitable forms may include ophthalmic solutions, gel-forming solutions, sterile powders for reconstitution, ophthalmic suspensions, ophthalmic ointments, ophthalmic emulsions, ophthalmic gels and ocular inserts.
- the compounds, salts, solvates or prodrugs of the invention may be provided in a form suitable for other types of ocular administration, for example as intraocular preparations (including as irrigating solutions, as intraocular, intravitreal or juxtascleral injection formulations, or as intravitreal implants), as packs or corneal shields, as intracameral, subconjunctival or retrobulbar injection formulations, or as iontophoresis formulations.
- intraocular preparations including as irrigating solutions, as intraocular, intravitreal or juxtascleral injection formulations, or as intravitreal implants
- packs or corneal shields as intracameral, subconjunctival or retrobulbar injection formulations, or as iontophoresis formulations.
- the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the invention will generally be provided in the form of ointments, cataplasms (poultices), pastes, powders, dressings, creams, plasters or patches.
- Suitable suspensions and solutions can be used in inhalers for airway (aerosol) administration.
- the dose of the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the present invention will, of course, vary with the disease, disorder or condition to be treated or prevented.
- a suitable dose will be in the range of 0.01 to 500 mg per kilogram body weight of the recipient per day.
- the desired dose may be presented at an appropriate interval such as once every other day, once a day, twice a day, three times a day or four times a day.
- the desired dose may be administered in unit dosage form, for example, containing 1 mg to 50 g of active ingredient per unit dosage form.
- any embodiment of a given aspect of the present invention may occur in combination with any other embodiment of the same aspect of the present invention.
- any preferred, typical or optional embodiment of any aspect of the present invention should also be considered as a preferred, typical or optional embodiment of any other aspect of the present invention.
- Xu, H. et al. CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours. Nat. Commun. 8, 14432 (2017).
- Preparative reversed-phase high pressure liquid chromatography was performed using a Gilson 281 Semi-preparative HPLC system and Phenomenex Luna C18 column (5 pm, 100 mm x 40 mm), eluting with binary solvent systems A and B using a gradient elution [A, H2O with 0.1% TFA; B, CH3CN] with UV detection at 220 nm.
- HCI as buffer Preparative reversed-phase high pressure liquid chromatography (RP- HPLC) was performed using a Gilson 281 Semi-preparative HPLC system and Phenomenex Luna C18 column (5 pm, 100 mm x 40 mm), eluting with binary solvent systems A and B using a gradient elution [A, H2O with 0.04% HCI; B, CH3CN] with UV detection at 220 nm.
- RP- HPLC Preparative reversed-phase high pressure liquid chromatography
- NH4HCO3 as buffer Preparative reversed-phase high pressure liquid chromatography (RP-HPLC) was performed using a Gilson 281 Semi-preparative HPLC system and Waters Xbridge Prep OBD C18 (10 pm, 150 mm x 40 mm), eluting with binary solvent systems A and B using a gradient elution [A, H2O with lOmM NH4HCO3; B, CH3CN] with UV detection at 220 nm.
- RP-HPLC Reparative reversed-phase high pressure liquid chromatography
- Example 1 N-(2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia- l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide
- 2,4-Dichloropyrimidine-5-carbonyl chloride A mixture of acid (1.00 g, 5.18 mmol, 1 eq) in SOCI2 (10.00 mL) was stirred at 65°C for 12 h. TLC showed the reaction was completed. The mixture was concentrated in vacuum to give the desired product (1.00 g, 4.73 mmol, 91.28% yield) as a yellow solid. The crude product was used in the next step without further purification.
- Example 2 4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl)- methyl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide tert-Butyl 2-( ⁇ [4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido ⁇ methyl )pyrrolidine- 1-carboxylate: To a solution of N-(2- aminoethyl)-4-(4-methyl-l,4-d
- Example 3 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(piperidin-2-yl)- methyl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide tert-Butyl 2-( ⁇ [4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido ⁇ methyl )piperidine- 1-carboxylate: To a solution of N-(2- aminoethyl)-4-(4-methyl-l,4
- Example 4 N-(2-hydroxyethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll- thia- 1,3, 5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , x 7 ]heptadeca-2, 4, 6, 9,12,14,16- heptaene-9-carboxamide
- Example 5 N-(3-aminopropyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll- thia- 1,3, 5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , x 7 ]heptadeca-2, 4, 6, 9,12,14,16- heptaene-9-carboxamide - Ill - tert-Butyl N-(3- ⁇ [4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido ⁇ propyl )carbamate: To a solution of N-(2-aminoethyl)-4-(4-methyl
- Example 6 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-3-yl)- methyl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide tert-Butyl 3-( ⁇ [4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido ⁇ methyl )pyrrolidine- 1-carboxylate: To a solution of N-(2- aminoethyl)-4-(4-methyl-l,
- Example 7 4-(4-Methylpiperazin-l-yl)-8-oxo-N-[(piperidin-2-yl)methyl]-ll- thia- 1,3, 5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , x 7 ]heptadeca-2, 4, 6, 9,12,14,16- heptaene-9-carboxamide
- Example 8 8-Oxo-4-(piperazin-l-yl)-N-[(piperidin-2-yl)methyl]-ll-thia- l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide
- Example 9 9-(3-aminopyrrolidine-l-carbonyl)-4-(4-methyl-l,4-diazepan-l- yl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaen-8-one tert-Butyl N- ⁇ l-[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2,4,6,9,12,14,16-heptaene-9- carbonyl] pyrrolidin-3-yl ⁇ carbamate: To a solution of N-(2-aminoethyl)-4-(4- methyl-l,4-diaze
- Example 16 9-(3-Aminopyrrolidine-l-carbonyl)-4-(piperazin-l-yl)-ll-thia- l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2(7),3,5,9,12,14,16- heptaen-8-one tert-Butyl 4-[9-(3- ⁇ [(tert-butoxy)carbonyl]amino ⁇ pyrrolidine-l-carbonyl)-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-
- Example 17 9-(3-Aminopyrrolidine-l-carbonyl)-4-[3-(dimethylamino)- pyrrolidin-l-yl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaen-8-one
- Example 20 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl)- methyl]-l,3,5,ll-tetraazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaene-9-carboxamide
- Ethyl 4-chloro-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]- heptadeca-2(7),3,5,9, 12, 14, 16-heptaene-9-carboxylate To a solution of ethyl 2-(lH-benzimidazol-2-yl) acetate (1.56 g, 7.69 mmol, 1 eq) in THF (15 mL) was added MgC (1.09 g, 11.54 mmol, 470.32 pL, 1.5 eq) at 25°C.
- Example 23 8-Oxo-4-(piperazin- 1-yl )-N-[(pyrrolidin-2-yl) methyl]- 1,3,5, 11- tetraazatetracyclo [8.7.0.0 2 , 7 .0 12 , x 7 ] heptadeca- 2(7), 3, 5, 9,12,14,16- heptaene-9-carboxamide
- the mixture was filtered to give the filter cake.
- the filter cake was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H2O (0.04% HCI)-MeCN]; gradient: l%-30% B over 8.0 min) to give the title compound (Example 23, 165.4 mg, 370.67 pmol, 94.44% yield) as brown solid.
- Example 25 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]heptadeca-2(7),3,5,9,12,14,16-heptaene- 9-carbohydrazide
- Example 26 was separated into isomer 1 (Example 26A) and isomer 2 (Example 26B) :
- Example 26A 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5- yl)-8-oxo-N-[[(2S)-pyrrolidin-2-yl]methyl]-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12( 17),13,15-heptaene-9- carboxamide
- Example 26B 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5- yl)-8-oxo-N-[[(2R)-pyrrolidin-2-yl]methyl]-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12( 17),13,15-heptaene-9- carboxamide
- Example 27 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidylmethyl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
- Example 28 N-(2-aminoethyl)-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo- [3,4-c]pyrrol-5-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
- Example 30 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidyl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
- Example 33 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidylmethyl)-l,3,5,ll-tetrazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
- Example 34 N-(aminomethyl)-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo- [3,4-c]pyrrol-5-yl)-8-oxo-l,3,5,ll-tetrazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
- Example 36 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidyl)-l, 3,5, ll-tetrazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ] heptadeca- 2, 4, 6, 9, 12(17), 13, 15-heptaene-9-carboxamide
- Example 37 N-(2-(methylamino)ethyl)-2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo[4',5']imidazo[l , ,2 , : l,6]pyrido[2,3- d]pyrimidine-6-carboxamide
- Example 38 4-(2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrol-5-yl)-8- oxo-N-(pyrrolidin-2-ylmethyl)-ll-thia-l,3,5-triazatetracyclo- [8.7.0.0 2 ' 7 .0 12 ' 17 ]heptadeca-2,4,6,9,12(17),13,15-heptaene-9-carboxamide
- Example 39 4-(2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrol-5-yl)-8- oxo-N-(pyrrolidin-2-ylmethyl)-l,3,5,ll-tetrazatetracyclo[8.7.0.0 2 ' 7 .0 12 ' 17 ] heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
- Example 88 2-(5-Ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N- (piperidin-4-yl)-5,7-dihydrobenzo[4',5']imidazo[ l',2' : l,6]pyrido[2,3-d]- pyrimidine-6-carboxamide
- Example 90 N-((lr,4r)-4-aminocyclohexyl)-2-(5-methylhexa hydropyrrolo [3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo [3',2':l,6]pyrido[2,3- d]pyrimidine-6-carboxamide
- Example 91 2-(4-methyl-l,4-diazepan-l-yl)-5-oxo-N-(pyrrolidin-2- ylmethyl )-5H-benzo[4',5 , ]oxazolo[3 , ,2' : 1,6] pyrido[2,3-d] pyrimidine-6- carboxamide
- 2,4-Dichloropyrimidine-5-carbonyl chloride A mixture of acid (1.00 g, 5.18 mmol, 1 eq) in SOC (10.00 mL) was stirred at 65°C for 12 h. TLC showed the reaction was completed. The mixture was concentrated in vacuo to give the desired product (1.00 g, 4.73 mmol, 91.28% yield) as a yellow solid. The crude product was used in the next step without further purification.
- Example 94 4-(l-methyl-l,7-diazaspiro[4.4]nonan-7-yl)-8-oxo-N-(4- piperidyl )- 11-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012, 17]heptadeca- 2, 4, 6, 9, 12(17), 13, 15-heptaene-9-carboxamide
- tert-Butyl l-methyl-l,7-diazaspiro[4.4]nonane-7-carboxylate To a solution of tert-butyl l,7-diazaspiro[4.4]nonane-7-carboxylate (1.5 g, 6.63 mmol, 1 eq ⁇ in DCM (15 mL) was added NaBH(OAc)3 (5.62 g, 26.51 mmol, 4 eq ⁇ and formaldehyde (1.08 g, 13.26 mmol, 986.91 pL
- Example 96 N-(2-((2-aminoethyl)disulfaneyl)ethyl)-2-(5-methyl- hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo- [3',2' : l,6]pyrido[ 2,3-d] pyrimidine-6-carboxamide
- Example 97 /V-(2-Mercaptoethyl)-2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5H-benzo [4 , ,5']thiazolo[3 , ,2': l,6]pyrido[2,3-d]- pyrimidine-6-carboxamide
- Example 98 7-methyl-2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)- 5-oxo-N-(piperidin-4-yl)-5,7-dihydrobenzo[4',5']imidazo[l , ,2 , : l,6]pyrido- [2,3-d] pyrimidine-6-carboxamide
- Antibodies and their respective conjugates were prepared for analysis by removal of small molecules + buffer exchange into miliQ H2O on ZebaSpinTM columns, and were submitted with a concentration of 10-15 pM (1.0 mgxml' 1 ) for analysis on the Xevo QTOF LC-MS system. 4-10 pL of each sample was injected and separation was achieved using mobile phase A (95% water, 5% MeCN, 0.1% formic acid) and B (5% water, 95% MeCN, 0.1% formic acid) using a gradient elution. Typical conditions were capillary voltage 1.6-2.2 kV, cone voltage 160- 190 V, Trap 40-50 V, Transfer 140 V with backing pressure 3-4 mbar and source temperature of 20 °C.
- Example ADC-1 Cetuximab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl-l,4- diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.0 2 , 7 .0 12 , 17 ]- heptadeca-2,4,6,9, 12,14,16-heptaene-9-carboxamide
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Abstract
The present invention provides compounds of Formula (I) and pharmaceutically acceptable salts and solvates thereof. The present invention also relates to antibody-drug conjugates (ADCs) comprising the compounds, to processes for the preparation of the compounds and ADCs, as well as to ADCs and pharmaceutical compositions comprising them for use in the treatment of cancer.
Description
TETRACYCLIC COMPOUNDS FOR USE IN ANTIBODY-DRUG CONJUGATES FOR THE TREATMENT OF CANCER
Field of the Invention
The present invention relates to fused tetracyclic heteroaromatic compounds and antibody-drug conjugates (ADCs) comprising the compounds. The present invention also relates to processes for the preparation of the compounds and ADCs, and to pharmaceutical compositions containing them and their use in therapy, particularly for use in treating cancers.
Background of the Invention
Small molecules that interact with genomic DNA have a long history of use in cancer chemotherapy (e.g. cisplatin family and anthracyclines).1 Such molecules target DNA indiscriminately and display broad toxicity in patients owing to their lack of molecular and biological specificity. Despite adverse toxicity, these drugs are still widely deployed in the clinic.2
G-quadruplexes (G4s) are four-stranded, non-canonical nucleic acid secondary structures which can form in guanine-rich DNA and RNA sequences. In the human genome, there are over 700,000 G4 forming sequences.3-5 These G4 motifs are particularly enriched at repetitive elements of the genome, e.g. telomeres, and at gene regulatory regions of protein-coding genes including many oncogenes.
Folded DNA and RNA G4s have been visualized in human cells and tissues,6-8 mapped in human chromatin and the human transcripome,9-12 and overall been found to be more abundant in cancer-like cells and tissues7-9.
G4s have been implicated in several key genome functions such as transcription, replication, translation, telomere maintenance and epigenetic regulation.13 Many G4s are likely transient and readily resolved by helicases14. Unresolved DNA G4s can impede DNA polymerases causing DNA damage and requiring homologous recombination (HR) repair15-16.
Some compounds, named G4 ligands (G4L), have been shown to interact with and stabilise G4s in vitro and in human chromatin17-19. Given the involvement of G4s in various pivotal cellular functions and the connection to cancer biology, G4Ls have been explored as therapeutic agents and shown antiproliferative and chemosensitizing effects against cancer cell lines and tumour models18-20-22. In cancer cells, DNA G4 stabilization may interfere with replication and transcription, affect epigenetic
modifications, promote DNA damage, affect the biogenesis and interactions of coding and non-coding RIMA or impair telomerase and thereby inhibit tumour growth.18'23 Different G4L chemotypes have been described to mediate genome-wide perturbations, target a subset of G4 topologies and particular G4s in certain oncogenes.18
Cancer cells often display higher sensitivity to G4L treatment than non-cancerous cells in accordance with the higher occurrence of folded G4s in the chromatin of cancer cell lines and tissues9-22. In addition, some G4Ls are synthetic lethal with loss of various cellular functions24, in particular DNA damage repair25-28, suggesting a biomarker- driven therapeutic approach as well as combination treatment with other agents.
Some G4Ls have shown activity in HR-deficient cells and tumour models that were resistant to PARP inhibitor treatment as well as gemcitabine-resistant pancreatic cancer cells, indicating that some G4Ls may be used to target difficult to treat certain tumours with acquired resistances.25-29'30
The G4L CX-5461 entered clinical trials for solid tumours with HR-deficiency mutations (NCT02719977)26. An observed reversion of BRCA2 and PALB2 confirmed the mechanism of action. The molecule was overall well tolerated, but displayed doselimiting phototoxicity.26 Similarly, photosensitivity had been observed in a previous clinical trial of CX-5461 in patients with hematologic malignancies.31
There is a need to provide compounds with improved pharmacological and/or physiological and/or physicochemical properties and/or those that provide a useful alternative to CX-5461.
Summary of the Invention
Formula (I) wherein :
R1 and R2 are each independently selected from hydrogen or a C1-C12 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include one or more cyclic groups, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety; or R1 and R2 together with the nitrogen atom to which they are attached form a 3- to 12-membered cyclic group, wherein the cyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a Ci-Ce saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises:
(i) a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp2 hybridised carbon atom; and/or
(ii) a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp2 hybridised carbon atom; and/or
(iii) a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp2 hybridised carbon atom;
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is N, C-H, C-Hal or C-RX3; and
X4 is N or C; provided that no more than three of X1, X2, X3 and X4 are N;
RX1 and RX3 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group,
wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO? groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
Q1 is O, S, N, N-H, N-RQ1, C-H, C-Hal, or C-R«2;
RQ1 is selected from a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety, provided that the atom of RQ1 that is directly attached to the nitrogen atom of N-RQ1 is a carbon atom;
RQ2 is selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
A1 is N, C-H, C-Hal or C-RA1;
A2 is N, C-H, C-Hal or C-RA2;
A3 is N, C-H, C-Hal or C-RA3;
A4 is N, C-H, C-Hal or C-RA4; and
A5 is N or C; provided that no more than three of A1, A2, A3, A4 and A5 are N;
RA1, RA2, RA3 and RA4 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its
carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
A6 is N or C; and each Hal is independently selected from a fluoro, chloro, bromo or iodo group.
As will be understood, and as indicated by the circles, each of the four rings in the fused tetracyclic ring system of Formula (I) is aromatic. In other words, X1, X2, X3, X4, A1, A2, A3, A4, A5, A6 and Q1 are selected such that each ring of the fused tetracyclic ring system of Formula (I) is aromatic.
In the context of the present specification, a "hydrocarbyl" substituent group or a hydrocarbyl moiety in a substituent group only includes carbon and hydrogen atoms but, unless stated otherwise, does not include any heteroatoms, such as N, O or S, in its carbon skeleton. A hydrocarbyl group/moiety may be saturated or unsaturated (including aromatic), and may be straight-chained or branched, or be or include cyclic groups wherein, unless stated otherwise, the cyclic group does not include any heteroatoms, such as N, O or S, in its carbon skeleton. Examples of hydrocarbyl groups include alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl and aryl groups/moieties and combinations of all of these groups/moieties. Typically a hydrocarbyl group is a C1-C20 hydrocarbyl group. More typically a hydrocarbyl group is a C1-C15 hydrocarbyl group. More typically a hydrocarbyl group is a C1-C10 hydrocarbyl group. A "hydrocarbylene" group is similarly defined as a divalent hydrocarbyl group.
An "alkyl" substituent group or an alkyl moiety in a substituent group may be linear (i.e. straight-chained) or branched. Examples of alkyl groups/moieties include methyl, ethyl, n-propyl, /-propyl, n-butyl, /-butyl, t-butyl and n-pentyl groups/moieties. Unless stated otherwise, the term "alkyl" does not include "cycloalkyl". Typically an alkyl group is a C1-C12 alkyl group. More typically an alkyl group is a Ci-Ce alkyl group. An "alkylene" group is similarly defined as a divalent alkyl group.
An "alkenyl" substituent group or an alkenyl moiety in a substituent group refers to an unsaturated alkyl group or moiety having one or more carbon-carbon double bonds. Examples of alkenyl groups/moieties include ethenyl, propenyl, 1-butenyl, 2-butenyl, 1-pentenyl, 1-hexenyl, 1,3-butadienyl, 1,3-pentadienyl, 1,4-pentadienyl and 1,4- hexadienyl groups/moieties. Unless stated otherwise, the term "alkenyl" does not include "cycloalkenyl". Typically an alkenyl group is a C2-C12 alkenyl group. More
typically an alkenyl group is a C2-C6 alkenyl group. An "alkenylene" group is similarly defined as a divalent alkenyl group.
An "alkynyl" substituent group or an alkynyl moiety in a substituent group refers to an unsaturated alkyl group or moiety having one or more carbon-carbon triple bonds. Examples of alkynyl groups/moieties include ethynyl, propargyl, but-l-ynyl and but-2- ynyl groups/moieties. Typically an alkynyl group is a C2-C12 alkynyl group. More typically an alkynyl group is a C2-C6 alkynyl group. An "alkynylene" group is similarly defined as a divalent alkynyl group.
A "cyclic" substituent group or a cyclic moiety in a substituent group refers to any hydrocarbyl ring, wherein the hydrocarbyl ring may be saturated or unsaturated (including aromatic) and may include one or more heteroatoms, e.g. N, O or S, in its carbon skeleton. Examples of cyclic groups include cycloalkyl, cycloalkenyl, heterocyclic, aryl and heteroaryl groups as discussed below. A cyclic group may be monocyclic, bicyclic (e.g. bridged, fused or spiro), or polycyclic. Typically, a cyclic group is a 3- to 12-membered cyclic group, which means it contains from 3 to 12 ring atoms. More typically, a cyclic group is a 3- to 7-membered monocyclic group, which means it contains from 3 to 7 ring atoms.
For the avoidance of doubt, where it is stated that a bicyclic or polycyclic group is "saturated" it is to be understood that all of the ring systems within the bicyclic or polycyclic group (excluding any ring systems which are part of or formed by optional substituents) are saturated.
A "heterocyclic" substituent group or a heterocyclic moiety in a substituent group refers to a cyclic group or moiety including one or more carbon atoms and one or more (such as one, two, three or four) heteroatoms, e.g. N, O or S, in the ring structure. Examples of heterocyclic groups include heteroaryl groups as discussed below and non-aromatic heterocyclic groups such as azetinyl, azetidinyl, oxetanyl, thietanyl, pyrrolidinyl, tetrahydrofuranyl, tetrahydrothiophenyl, pyrazolidinyl, imidazolidinyl, dioxolanyl, oxathiolanyl, piperidinyl, tetrahydropyranyl, thianyl, piperazinyl, dioxanyl, morpholinyl and thiomorpholinyl groups.
A "cycloalkyl" substituent group or a cycloalkyl moiety in a substituent group refers to a saturated hydrocarbyl ring containing, for example, from 3 to 7 carbon atoms, examples of which include cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl. Unless
stated otherwise, a cycloalkyl substituent group or moiety may include monocyclic, bicyclic or polycyclic hydrocarbyl rings.
A "cycloalkenyl" substituent group or a cycloalkenyl moiety in a substituent group refers to a non-aromatic unsaturated hydrocarbyl ring having one or more carboncarbon double bonds and containing, for example, from 3 to 7 carbon atoms, examples of which include cyclopent-l-en-l-yl, cyclohex-l-en-l-yl and cyclohex-1, 3- dien-l-yl. Unless stated otherwise, a cycloalkenyl substituent group or moiety may include monocyclic, bicyclic or polycyclic hydrocarbyl rings.
An "aryl" substituent group or an aryl moiety in a substituent group refers to an aromatic hydrocarbyl ring. The term "aryl" refers to monocyclic aromatic hydrocarbons and polycyclic fused ring aromatic hydrocarbons wherein all of the fused ring systems (excluding any ring systems which are part of or formed by optional substituents) are aromatic. Examples of aryl groups/moieties include phenyl, naphthyl, anthracenyl and phenanthrenyl. Unless stated otherwise, the term "aryl" does not include "heteroaryl".
A "heteroaryl" substituent group or a heteroaryl moiety in a substituent group refers to an aromatic heterocyclic group or moiety. The term "heteroaryl" refers to monocyclic aromatic heterocycles and polycyclic fused ring aromatic heterocycles wherein all of the fused ring systems (excluding any ring systems which are part of or formed by optional substituents) are aromatic. Examples of heteroaryl groups/moieties include the following:
wherein G = O, S or NH. Particular examples of 5- or 6-membered heteroaryl groups include furanyl, thiophenyl, pyrrolyl, imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, thiazolyl, isothiazolyl, triazolyl, furazanyl, oxadiazolyl, thiadiazolyl, tetrazolyl, pyridinyl, pyridazinyl, pyrimidinyl, pyrazinyl and triazinyl groups.
Unless stated otherwise, where a cyclic group or moiety is stated to be aromatic, such as an aryl or a heteroaryl group, it is to be understood that each ring system within the group or moiety (excluding any ring systems which are part of or formed by
optional substituents) is aromatic. Similarly, where a cyclic group or moiety is stated to be non-aromatic, such as a cycloalkyl, cycloalkenyl or non-aromatic heterocyclic group, it is to be understood that each ring system within the group or moiety (excluding any ring systems which are part of or formed by optional substituents) is non-aromatic.
For the purposes of the present specification, where a combination of moieties is referred to as one group, for example, arylalkyl, arylalkenyl, arylalkynyl, alkylaryl, alkenylaryl or alkynylaryl, the last mentioned moiety contains the atom by which the group is attached to the rest of the molecule. An example of an arylalkyl group is benzyl.
As will be appreciated, in an optionally substituted moiety: each hydrogen atom may optionally be replaced by any specified monovalent substituent; any two hydrogen atoms attached to the same carbon or nitrogen atom may optionally be replaced by any specified n-bonded substituent; any sulphur atom may optionally be substituted with one or two of any specified n-bonded substituents; and any two hydrogen atoms attached to the same or different atoms, within the same optionally substituted group or moiety, may optionally be replaced by any specified divalent bridging substituent.
Typically a substituted group comprises 1, 2, 3 or 4 substituents, more typically 1, 2 or 3 substituents, more typically 1 or 2 substituents, and more typically 1 substituent.
Unless stated otherwise, any divalent bridging substituent (e.g. -O-, -S-, -NH-, -CH2-, -CH2-CH2-, etc.) of an optionally substituted group or moiety (e.g. R1) must only be attached to the specified group or moiety and may not be attached to a second group or moiety (e.g. R2), even if the second group or moiety can itself be optionally substituted.
The term "halo" includes fluoro, chloro, bromo and iodo.
Unless stated otherwise, where a group is prefixed by the term "halo", such as a haloalkyl or halomethyl group, it is to be understood that the group in question is substituted with one or more halo groups independently selected from fluoro, chloro, bromo and iodo. Typically, the maximum number of halo substituents is limited only
by the number of hydrogen atoms available for substitution on the corresponding group without the halo prefix. For example, a halomethyl group may contain one, two or three halo substituents. A haloethyl or halophenyl group may contain one, two, three, four or five halo substituents. Similarly, unless stated otherwise, where a group is prefixed by a specific halo group, it is to be understood that the group in question is substituted with one or more of the specific halo groups. For example, the term "fluoromethyl" refers to a methyl group substituted with one, two or three fluoro groups.
Similarly, unless stated otherwise, where a group is said to be "halo-substituted", it is to be understood that the group in question is substituted with one or more halo groups independently selected from fluoro, chloro, bromo and iodo. Typically, the maximum number of halo substituents is limited only by the number of hydrogen atoms available for substitution on the group said to be halo-substituted. For example, a halo-substituted methyl group may contain one, two or three halo substituents. A halo-substituted ethyl or halo-substituted phenyl group may contain one, two, three, four or five halo substituents.
Unless stated otherwise, any reference to an element is to be considered a reference to all isotopes of that element. Thus, for example, unless stated otherwise any reference to hydrogen is considered to encompass all isotopes of hydrogen including deuterium and tritium.
Unless stated otherwise, any reference to a compound or group is to be considered a reference to all tautomers of that compound or group.
Where reference is made to a hydrocarbyl or other group including one or more heteroatoms N, O or S in its carbon skeleton, or where reference is made to a carbon atom of a hydrocarbyl or other group being replaced by an N, O or S atom, what is intended is that:
— CH— — N —
| is replaced by |
-CH2- is replaced by -NH-, -O- or -S-;
-CH3 is replaced by -NH2, -OH or -SH;
-CH= is replaced by -N = ;
CH?= is replaced by NH = , 0= or S = ; or
CH= is replaced by N = ; provided that the resultant group comprises at least one carbon atom. For example, methoxy, dimethylamino and aminoethyl groups are considered to be hydrocarbyl groups including one or more heteroatoms N, O or S in their carbon skeleton.
Typically, the compounds of the invention contain no more than one quaternary ammonium group. More typically, the compounds of the invention contain no quaternary ammonium groups.
In the context of the present specification, unless otherwise stated, a Cx-Cy group is defined as a group containing from x to y carbon atoms. For example, a C1-C4 alkyl group is defined as an alkyl group containing from 1 to 4 carbon atoms. For the purposes of allocating x and y in a Cx-Cy group, optional substituents are not taken into account when calculating the total number of carbon atoms in the parent group substituted with the optional substituents. For the avoidance of doubt, replacement heteroatoms, e.g. N, O or S, are not to be counted as carbon atoms when calculating the number of carbon atoms in a Cx-Cy group. For example, a morpholinyl group is to be considered a C4 heterocyclic group, not a Ce heterocyclic group.
For the purposes of the present specification, where it is stated that a first atom or group is "directly attached" to a second atom or group it is to be understood that the first atom or group is covalently bonded to the second atom or group with no intervening atom(s) or group(s) being present. So, for example, for the group -(C=O)N(CH3)2, the carbon atom of each methyl group is directly attached to the nitrogen atom and the carbon atom of the carbonyl group is directly attached to the nitrogen atom, but the carbon atom of the carbonyl group is not directly attached to the carbon atom of either methyl group.
As stated in accordance with the first aspect of the invention, R1 and R2 are each independently selected from hydrogen or a C1-C12 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include one or more cyclic groups, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)-
or -SO( = NH)- moiety, or R1 and R2 together with the nitrogen atom to which they are attached form a 3- to 12-membered cyclic group, wherein the cyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a Ci-Ce (e.g. C1-C4) saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety.
In one embodiment of the first aspect of the invention, R1 and R2 are each independently selected hydrogen or a C1-C12 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include one or more cyclic groups, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety.
Typically in such an embodiment, R1 and R2 are each independently selected from hydrogen or a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, and wherein the hydrocarbyl group may optionally include one, two, three or four heteroatoms each independently selected from N and O in its carbon skeleton. For example, R1 may be a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, and wherein the hydrocarbyl group may optionally include one, two, three or four heteroatoms each independently selected from N and O in its carbon skeleton, and R2 may be selected from hydrogen or a C1-C4 alkyl or C1-C4 haloalkyl group.
In one aspect of such an embodiment, R1 and R2 are each independently selected from hydrogen or a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO? groups, and wherein the hydrocarbyl group may optionally include one, two or three heteroatoms each independently selected from N and O in its carbon skeleton. For example, R1 may be a Ci-Cs saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, and wherein the hydrocarbyl group may optionally include one, two or three heteroatoms each independently selected from N and O in its carbon skeleton, and R2 may be selected from hydrogen or a C1-C4 alkyl or C1-C4 haloalkyl group.
In a further embodiment, R1 is a Ci-Cs saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, wherein the hydrocarbyl group optionally includes one or two heteroatoms each independently selected from N and O in its carbon skeleton, and R2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group.
In one embodiment, R1 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted, and R2 is selected from hydrogen or a methyl or fluoromethyl group. For example, -NRXR2 may have the formula -NMe2.
In another embodiment, R1 is a C2-C8 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups, wherein the hydrocarbyl group includes one or two heteroatoms each independently selected from N and O in its carbon skeleton, and R2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group. For example, R1 may be selected from a -(C(R101)2)2-X10-R102 or -(C(R101)2)2-X10-(C(R101)2)2-X11-R102 group, and R2 may be selected from hydrogen or a methyl or fluoromethyl group, wherein : X10 is selected from O or NR103;
X11 is selected from O or NR104; each R101 is hydrogen;
R102 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted;
R103 is selected from hydrogen or a methyl or fluoromethyl group; and
R104 is selected from hydrogen or a methyl or fluoromethyl group; or a single R101 and R103, or a single R101 and R104, or R103 and R104 together form a -(CH2)2- group; provided that any -(C(R101)2)2-X10-R102 or -(C(R101)2)2-X10-(C(R101)2)2-X11-R102 group contains no more than 8 carbon atoms.
In another embodiment, R1 has the formula -U-R10, wherein L1 is a C1-C2 alkylene or C1-C2 fluoroalkylene group, and R10 is a 5- or 6-membered heteroaryl group, such as an imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, thiazolyl or isothiazolyl group, and R2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group. Typically in such an embodiment, R2 is selected from hydrogen or a methyl or fluoromethyl group. In one aspect of such an embodiment, -NRXR2 has a formula selected from :
In one embodiment of the first aspect of the invention, R1 and R2 together with the nitrogen atom to which they are attached form a 3- to 12-membered cyclic group, wherein the cyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a Ci-Ce (e.g. C1-C4) saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety.
As will be understood, where R1 and R2 together with the nitrogen atom to which they are attached form a 3- to 12-membered cyclic group, the resultant cyclic group is a heterocyclic group.
Typically in such an embodiment, R1 and R2 together with the nitrogen atom to which they are attached form a 4- to 7-membered monocyclic group or a 6- to 12- membered (e.g. 6- to 10-membered) bicyclic group, wherein the monocyclic or the bicyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -NH2 or a Ci-Ce saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton. More typically in such an embodiment, R1 and R2 together with the nitrogen atom to which they are attached form a 4- to 7- membered monocyclic group or a 6- to 12-membered (e.g. 6- to 10-membered) bicyclic group, wherein the monocyclic or the bicyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -NH2 or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton .
Where R1 and R2 together with the nitrogen atom to which they are attached form a 4- to 7-membered monocyclic group, typically the monocyclic group is a saturated monocyclic group.
In one embodiment, R1 and R2 together with the nitrogen atom to which they are attached form a 6- or 7-membered saturated monocyclic group, wherein the saturated monocyclic group includes one further ring heteroatom selected from N and O in its carbon skeleton (such as a piperazinyl, morpholinyl, diazepanyl or oxazepanyl group), and wherein the saturated monocyclic group may optionally be substituted with one or more substituents each independently selected from a fluoro, oxo (=0), -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups
and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
For example, -NR/R2 may have the formula:
wherein : n is 1 or 2; m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10; each R11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R11 are selected from a methyl or fluoromethyl group;
X12 is O or NR12; and
R12 is hydrogen or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
Typically, m is 0.
Typically, X12 is NR12.
Typically, R12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R120 group, wherein R120 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically, R12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. For example, R12 may be selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl or C3-C4 fluorocycloalkyl group. More typically still, R12 is selected from hydrogen or a C1-C3
alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. Yet more typically, R12 is selected from hydrogen or a methyl or fluoromethyl group.
In another embodiment, R1 and R2 together with the nitrogen atom to which they are attached form an azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group, wherein the azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group is substituted with an -NR13R14 group such that the nitrogen atom of the -NR13R14 group is not directly attached to a carbon atom that in turn is directly attached to the ring nitrogen atom of the azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group, wherein R13 and R14 are each independently selected from hydrogen or a methyl or fluoromethyl group, and wherein the azetidinyl, pyrrolidinyl, piperidinyl or azepanyl group may optionally be further substituted with one or more fluoro groups and/or with one, two, three or four methyl or fluoromethyl groups. Typically in such an embodiment, R1 and R2 together with the nitrogen atom to which they are attached form a pyrrolidinyl or piperidinyl group, wherein the pyrrolidinyl or piperidinyl group is substituted with an -NR13R14 group such that the nitrogen atom of the -NR13R14 group is not directly attached to a carbon atom that in turn is directly attached to the ring nitrogen atom of the pyrrolidinyl or piperidinyl group, wherein R13 and R14 are each independently selected from hydrogen or a methyl or fluoromethyl group.
In yet another embodiment, R1 and R2 together with the nitrogen atom to which they are attached form a 6- to 12-membered (e.g. 6- to 10-membered) bicyclic group, wherein the bicyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -NH2 or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the
hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton.
Without wishing to be bound be theory, it is thought that the compounds of the invention where R1 and R2 together with the nitrogen atom to which they are attached form a bicyclic group offer particular steric and electronic properties that are advantageous to the pharmacological profile of the molecule.
Typically in such an embodiment, R1 and R2 together with the nitrogen atom to which they are attached form a 8- to 10-membered fused bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 5- or 6-membered ring of the fused bicyclic group, and the first 5- or 6-membered ring is fused to a second 5- or 6- membered ring of the fused bicyclic group. Typically, the first 5- or 6-membered ring is not aromatic, and the first 5- or 6-membered ring is optionally substituted with one or more substituents each independently selected from a fluoro, oxo ( = 0), -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton .
In one embodiment, the second 5- or 6-membered ring is aromatic, and the second 5- or 6-membered ring is optionally substituted with one or more substituents each independently selected from a fluoro, chloro, bromo, -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
In one aspect of such an embodiment, the first 5- or 6-membered ring is not aromatic and is unsubstituted, and the second 5- or 6-membered ring is an unsubstituted 5- membered heteroaryl ring comprising a NH group. In one aspect of such an embodiment, -NRXR2 has the formula:
In another embodiment, the second 5- or 6-membered ring is not aromatic, and the second 5- or 6-membered ring is optionally substituted with one or more substituents each independently selected from a fluoro, oxo (=0), -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton. Typically in such an embodiment, the first 5- or 6-membered ring is saturated and the second 5- or 6- membered ring is saturated. For example, R1 and R2 may together with the nitrogen atom to which they are attached form a 8- to 10-membered saturated fused bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 5- or 6- membered ring of the fused bicyclic group, wherein the first 5- or 6-membered ring is fused to a second 5- or 6-membered ring of the fused bicyclic group, and wherein the fused bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, oxo ( = 0), -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
Typically in such an embodiment, the second 5- or 6-membered ring comprises at least one ring nitrogen atom. Typically, said ring nitrogen atom is not directly attached to a sp2 hybridised carbon atom. Typically where the second 5- or 6-membered ring comprises at least one ring nitrogen atom, the first 5- or 6-membered ring is saturated and the second 5- or 6-membered ring is saturated. For example, R1 and R2 may together with the nitrogen atom to which they are attached form a 8- to 10- membered saturated fused bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 5- or 6-membered ring of the fused bicyclic group, wherein the first 5- or 6-membered ring is fused to a second 5- or 6-membered ring of the fused bicyclic group, wherein the second 5- or 6-membered ring comprises at least one ring nitrogen atom, and wherein the fused bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, -OH, -NH2, or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R121 group, wherein each R121 is independently selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or
fluorocyclopropyl group. More typically, where such a fused bicyclic group is substituted, it is substituted with one or more substituents each independently selected from a fluoro, -OH, -NH2, or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl or C3-C4 fluorocycloalkyl group.
In one embodiment, -NRXR2 has the formula:
wherein : j is 0, 1, 2 or 3; k is 0, 1, 2 or 3; p is 0, 1, 2 or 3; and q is 0, 1, 2 or 3; provided that: j + k = 2 or 3; p + q = 2 or 3; when j = 0, q is 1, 2 or 3; when k = 0, p is 1, 2 or 3; when p = 0, k is 1, 2 or 3; and when q = 0, j is 1, 2 or 3; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group, wherein R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; and each R16 is independently selected from a methyl or fluoromethyl group.
Typically in such an embodiment, j is 1 or 2 and k is 1 or 2. More typically, j is 1 and k is 1.
Typically in such an embodiment, p is 0, 1 or 2 and q is 1 or 2. More typically, p is 1 or 2 and q is 1 or 2.
Typically in such an embodiment, r is 0 and s is 0.
Thus, for example, -NRXR2 may have the formula :
wherein : p is 1 or 2; q is 1 or 2; p + q = 2 or 3; and
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group, wherein R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
Typically in the above embodiments, R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically, R15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
In a further embodiment, -NRXR2 has the formula :
wherein : r is 0, 1 or 2; s is 0, 1 or 2; t is 1 or 2; and each R16 is independently selected from a methyl or fluoromethyl group.
Typically in such an embodiment, r is 0 and s is 0.
Typically in such an embodiment, t is 1.
In yet another embodiment, -NRXR2 has the formula:
wherein : j is 0, 1, 2 or 3; and k is 0, 1, 2 or 3; provided that j + k = 2 or 3; and wherein : v is 1 or 2; r is 0, 1 or 2; s is 0, 1 or 2; and each R16 is independently selected from a methyl or fluoromethyl group.
Typically in such an embodiment, j is 1 or 2 and k is 1 or 2. More typically, j is 1 and k is 1.
Typically in such an embodiment, v is 1.
Typically in such an embodiment, r is 0 and s is 0.
As will be understood, where a first 5- or 6-membered ring is fused to a second 5- or 6-membered ring across two sp3 hybridised ring carbon atoms, e.g. across two ring carbon atoms in a saturated fused bicyclic ring system, the second ring may be fused cis- or trans- to the first ring. For example, -NRXR2 may have the formula:
In another embodiment, where R1 and R2 together with the nitrogen atom to which they are attached form a 6- to 12-membered bicyclic group, R1 and R2 together with the nitrogen atom to which they are attached form a 6- to 12-membered spiro bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 4- to 7- membered ring of the spiro bicyclic group, and the first 4 to 7-membered ring shares a spiro ring atom with a second 3- to 7-membered ring of the spiro bicyclic group. Typically, the 6- to 12-membered spiro bicyclic group is unsubstituted or substituted with one or more substituents each independently selected from a fluoro, oxo ( = 0), -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
Typically in such an embodiment, the first 4- to 7-membered ring is saturated and the second 3- to 7-membered ring is saturated. For example, R1 and R2 may together with the nitrogen atom to which they are attached form a 9- to 11-membered saturated
spiro bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 5- or 6-membered ring of the spiro bicyclic group, and the first 5- or 6-membered ring shares a spiro ring atom with a second 5- or 6-membered ring of the spiro bicyclic group, and wherein the saturated spiro bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, oxo (=0), -OH, -NH2, or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group.
Typically in such an embodiment, the second 3- to 7-membered ring is a 4- to 7- membered ring that comprises at least one ring nitrogen or ring oxygen atom. Typically, said ring nitrogen or ring oxygen atom is not directly attached to a sp2 hybridised carbon atom. Typically where the second 4- to 7-membered ring comprises at least one ring nitrogen atom or at least one ring oxygen atom, the first 4- to 7- membered ring is saturated and the second 4- to 7-membered ring is saturated. For example, R1 and R2 may together with the nitrogen atom to which they are attached form a 9- to 11-membered saturated spiro bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 5- or 6-membered ring of the spiro bicyclic group, and the first 5- or 6-membered ring shares a spiro ring atom with a second 5- or 6- membered ring of the spiro bicyclic group, wherein the second 5- or 6-membered ring comprises at least one ring nitrogen atom or at least one ring oxygen atom, and wherein the saturated spiro bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, oxo (=0), -OH, -NH2, or a Ci- C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group.
Typically, where the saturated spiro bicyclic group is substituted, it is substituted with one or more substituents each independently selected from a fluoro, oxo (=0), C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group.
X15 is O or NR15;
j is 0, 1, 2, 3 or 4; k is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; and q is 0, 1, 2, 3 or 4; provided that: j + k = 3 or 4; p + q = 3 or 4; when j = 0, q is 1, 2, 3 or 4 and p is 1, 2, 3 or 4; when k = 0, q is 1, 2, 3 or 4 and p is 1, 2, 3 or 4; when p = 0, k is 1, 2, 3 or 4 and j is 1, 2, 3 or 4; and when q = 0, k is 1, 2, 3 or 4 and j is 1, 2, 3 or 4; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group, wherein R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; and each R16 is independently selected from a methyl or fluoromethyl group.
Typically in such an embodiment, j is 1 or 2 and k is 1 or 2.
Typically in such an embodiment, p is 0, 1 or 2 and q is 1, 2 or 3. More typically, p is 0, 1 or 2 and q is 2 or 3.
Typically in such an embodiment, r is 0 and s is 0.
Typically in such an embodiment, R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, Ci- C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically, R15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically still, R15 is hydrogen or a methyl or fluoromethyl group.
In another embodiment, -NRXR2 has the formula :
wherein : j is 0, 1, 2, 3 or 4; k is 0, 1, 2, 3 or 4; p is 0, 1, 2 or 3; and q is 0, 1, 2 or 3; provided that: j + k = 3 or 4; p + q = 2 or 3; when j = 0, p is 1, 2 or 3; when k = 0, p is 1, 2 or 3; and when p = 0, j is 1, 2, 3 or 4 and k is 1, 2, 3 or 4; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group; and each R16 is independently selected from a methyl or fluoromethyl group.
Typically in such an embodiment, j is 1 or 2 and k is 1 or 2.
Typically in such an embodiment, p is 1 or 2 and q is 1 or 2.
Typically in such an embodiment, r is 0 and s is 0.
Typically in such an embodiment, R15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically, R15 is hydrogen or a methyl or fluoromethyl group. More typically still, R15 is hydrogen.
For example, -NRXR2 may have the formula:
In a further embodiment, where R1 and R2 together with the nitrogen atom to which they are attached form a 6- to 12-membered bicyclic group, R1 and R2 together with the nitrogen atom to which they are attached form a 7- to 9-membered bridged bicyclic group. Typically, the 7- to 9-membered bridged bicyclic group is unsubstituted or substituted with one or more substituents each independently selected from a fluoro, oxo ( = 0), -OH, -NH2, or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
Typically in such an embodiment, the 7- to 9-membered bridged bicyclic group is saturated. For example, R1 and R2 may together with the nitrogen atom to which they are attached form a 7- or 8-membered saturated bridged bicyclic group, wherein the saturated bridged bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, oxo (=0), -OH, -NH2, or a Ci- C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R121 group, wherein each R121 is independently selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
Typically in such an embodiment, the 7- to 9-membered bridged bicyclic group comprises a least one further ring nitrogen or ring oxygen atom. Typically, said further ring nitrogen or ring oxygen atom is not directly attached to a sp2 hybridised carbon atom. Typically where the 7- to 9-membered bridged bicyclic group comprises a least one further ring nitrogen or ring oxygen atom, the 7- to 9-membered bridged bicyclic group is saturated. For example, R1 and R2 may together with the nitrogen atom to which they are attached form a 7- or 8-membered saturated bridged bicyclic group, wherein the saturated bridged bicyclic group contains one further ring nitrogen atom, and wherein the saturated bridged bicyclic group may optionally substituted with one or more substituents each independently selected from a fluoro, oxo ( = 0), -OH, -NH2,
or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R121 group, wherein each R121 is independently selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
Typically, where the saturated bridged bicyclic group is substituted, it is substituted with one or more substituents each independently selected from a fluoro, oxo ( = 0), C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group.
X15 is O or NR15;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group, wherein R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; one R17 and one R18 together form a -CH2- or -CH2CH2- group; and each remaining R17 and R18 is hydrogen.
Typically in such an embodiment, w is 1.
Typically in such an embodiment, X15 is NR15.
Typically in such an embodiment, R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, Ci- C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically, R15 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically still, R15 is hydrogen or a methyl or fluoromethyl group. Yet more typically, R15 is a methyl or fluoromethyl group.
Typically in such an embodiment, one R17 and one R18 together form a -CH2CH2- group.
As stated in accordance with the first aspect of the invention, R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises:
(i) a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp2 hybridised carbon atom; and/or
(ii) a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp2 hybridised carbon atom; and/or
(iii) a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp2 hybridised carbon atom.
Typically, the carbon atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a sp2 hybridised carbon atom. More typically, the carbon atom of R3 that is directly attached to the remainder of the compound of Formula (I) is the carbon atom of a carbonyl group. More typically still, the carbon atom of R3 that is directly attached to the remainder of the compound of Formula (I) is the carbon atom of an amide group.
In one embodiment of the first aspect of the invention, R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp2 hybridised carbon atom. Typically, where the C1-C12 monovalent group comprises a primary amine, the nitrogen atom of the primary amine is directly attached to a sp3 hybridised carbon atom. Typically, where the C1-C12 monovalent group comprises a secondary amine, the nitrogen atom of the secondary amine is directly attached to two sp3 hybridised carbon atoms.
R31 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R31 that is directly attached to the nitrogen atom of N-R31 is a carbon atom;
R32 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R32 that is directly attached to the nitrogen atom of NH-R32 is a carbon atom that is not substituted with an oxo (=0) group; or R31 and R32 together form a C2-C6 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R33, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a bond or a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic
group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Formula (II) wherein R1, R2, Xx-X4, Ax-A6, Q1, L3, R31 and R32 are as defined in accordance with Formula (I).
In one embodiment:
L3 is a bond or a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; and each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group, wherein the cycloalkylene group may optionally be fluoro substituted;
or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond.
Typically in the above embodiments, R31 is hydrogen.
In one embodiment, L3 is not a bond. For example, L3 may be a C2-C4 straight- chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group, wherein : each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group, wherein the cycloalkylene group may optionally be fluoro substituted; or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond.
Typically where L3 is not a bond, R31 is hydrogen.
In another embodiment, L3 is not a bond and R31 is not hydrogen. Thus, there is provided an embodiment wherein R3 has the formula :
wherein :
R31 is a Ci-C6 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R31 that is directly attached to the nitrogen atom of N-R31 is a carbon atom;
R32 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R32 that is directly attached to the nitrogen atom of NH-R32 is a carbon atom that is not substituted with an oxo (=0) group; or R31 and R32 together form a C2-C6 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R33, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form
a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
In one aspect of such an embodiment:
L3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; and each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group, wherein the cycloalkylene group may optionally be fluoro substituted; or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond.
In one embodiment, R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group. Typically in such an embodiment, R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups. More typically in such an embodiment, R31 is hydrogen or a methyl or fluoromethyl group. More typically still, R31 is hydrogen.
In one embodiment, R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups. Typically in
such an embodiment, R32 is hydrogen or a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
In another embodiment, R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33. Typically in such an embodiment, R31 and R32 together form a C3-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single group R33.
In one embodiment, L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3. Typically in such an embodiment, L3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3.
In one embodiment each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34. Typically in such an embodiment, each RL3 is independently selected from a methyl or a fluoromethyl group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34.
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an embodiment:
L3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34.
In one aspect of such an embodiment, R31 is hydrogen.
In another aspect of such an embodiment, R31 is not hydrogen. Thus, in one embodiment R3 has the formula:
wherein :
R31 is a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an aspect:
L3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and
each RL3 is independently selected from a methyl or a fluoromethyl group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34.
In certain embodiments:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Most typically in such embodiments, R31 is hydrogen.
In other embodiments:
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group RL3, and wherein the alkylene group may optionally be further substituted with one or more fluoro groups;
RL3 and R31 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
In other embodiments:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-NH-CH2CH2- group, wherein the alkylene or the -CH2CH2-NH-CH2CH2- group is substituted with one or two groups RL3, and wherein the alkylene or the -CH2CH2-NH-CH2CH2- group may optionally be further substituted with one or more fluoro groups; one RL3 and R32 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; the second RL3, if present, is selected from a methyl or a fluoromethyl group; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Most typically in such embodiments, R31 is hydrogen.
In one aspect of such embodiments, L3 is a C2-C4 or a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group RL3, and wherein the alkylene group may optionally be further substituted with one or more fluoro groups.
Most typically in such embodiments, the one RL3 and R32 together with the atoms of the L3-NH group to which they are attached together form a pyrrolidinyl or piperidinyl group. For instance, R3 may have the formula -CH2-R30, wherein R30 is a pyrrolidin-2- yl, pyrrolidin-3-yl, piperidin-2-yl, piperidin-3-yl or piperidin-4-yl group.
In other embodiments:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group is substituted with two groups RL3, and wherein the alkylene group may optionally be substituted with one or more fluoro groups; and the two groups RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; provided that the group R3 contains no more than 12 carbon atoms.
Most typically in such embodiments, R31 is hydrogen.
In other embodiments:
R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group is substituted with one group R33, and wherein the alkylene group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group RL3, and wherein the alkylene group may optionally be further substituted with one or more fluoro groups; and
RL3 and R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be further substituted with one or more fluoro groups; provided that the group R3 contains no more than 12 carbon atoms.
In another embodiment of the first aspect of the invention, R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp2 hybridised carbon atom. Typically, where the C1-C12 monovalent group comprises a -OH group, the oxygen atom of the -OH group is directly attached to a sp3 hybridised carbon atom.
R41 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R41 that is directly attached to the nitrogen atom of N-R41 is a carbon atom;
L4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL4, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the oxygen atom of the -OH group is not substituted with an oxo (=0) group; each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL4 and R41 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R44; and each R44 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Formula (III)
wherein R1, R2, Xx-X4, Ax-A6, Q1, L4 and R41 are as defined in accordance with Formula (I).
In one aspect of such an embodiment:
L4 is a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL4, provided that the carbon atom of the alkylene group that is directly attached to the oxygen atom of the -OH group is not substituted with an oxo (=0) group; and each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group, wherein the cycloalkylene group may optionally be fluoro substituted; or any RL4 and R41 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R44.
In one aspect of such an embodiment, R41 is hydrogen.
In another aspect of such an embodiment, R41 is not hydrogen.
In one embodiment, R41 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group. Typically in such an embodiment, R41 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups. More typically in such an embodiment, R41 is hydrogen or a methyl or fluoromethyl group. More typically still, R41 is hydrogen.
In one embodiment, L4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL4. Typically in such an embodiment, L4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL4.
In one embodiment each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL4 and R41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R44. Typically in such an embodiment, each RL4 is independently selected from a methyl or a fluoromethyl group, or any RL4 and R41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R44.
R41 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL4; each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL4 and R41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R44; and each R44 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an embodiment:
L4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL4; and each RL4 is independently selected from a methyl or a fluoromethyl group, or any RL4 and R41 may together form a C2-C4 straight-chained alkylene group, wherein
the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R44.
Typically in such an embodiment, R41 is hydrogen.
In one aspect of such an embodiment, R41 is not hydrogen.
In certain embodiments:
R41 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL4; and each RL4 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such embodiments, R41 is hydrogen.
In other embodiments:
L4 is a C2-C3 straight-chained alkylene group, wherein the alkylene group is substituted with one group RL4, and wherein the alkylene group may optionally be further substituted with one or more fluoro groups;
RL4 and R41 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R44; and each R44 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
In another embodiment of the first aspect of the invention, R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp2 hybridised carbon atom. Typically, where the C1-C12 monovalent group comprises a -SH group, the sulphur atom of the -SH group is directly attached to a sp3 hybridised carbon atom.
R51 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R51 that is directly attached to the nitrogen atom of N-R51 is a carbon atom;
L5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL5, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the sulphur atom of the -SH group is not substituted with an oxo (=0) group; each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted;
or any RL5 and R51 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R54; and each R54 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Formula (IV) wherein R1, R2, Xx-X4, Ax-A6, Q1, L5 and R51 are as defined in accordance with Formula (I).
In one aspect of such an embodiment:
L5 is a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL5, provided that the carbon atom of the alkylene group that is directly attached to the sulphur atom of the -SH group is not substituted with an oxo (=0) group; and each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group, wherein the cycloalkylene group may optionally be fluoro substituted; or any RL5 and R51 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R54.
Typically in such an embodiment, R51 is hydrogen.
In another aspect of such an embodiment, R51 is not hydrogen.
In one embodiment, R51 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group. Typically in such an embodiment, R51 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups. More typically in such an embodiment, R51 is hydrogen or a methyl or fluoromethyl group. More typically still, R51 is hydrogen.
In one embodiment, L5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL5. Typically in such an embodiment, L5 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL5.
In one embodiment each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL5 and R51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R54. Typically in such an embodiment, each RL5 is independently selected from a methyl or a fluoromethyl group, or any RL5 and R51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R54.
R51 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL5; each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL5 and R51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R54; and each R54 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an embodiment:
L5 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL5; and each RL5 is independently selected from a methyl or a fluoromethyl group, or any RL5 and R51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R54.
Typically in such an embodiment, R51 is hydrogen.
In one aspect of such an embodiment, R51 is not hydrogen.
In certain embodiments:
R51 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L5 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL5; and each RL5 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
As stated in accordance with the first aspect of the invention :
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is N, C-H, C-Hal or C-RX3; and
X4 is N or C; provided that no more than three of X1, X2, X3 and X4 are N; and
RX1 and RX3 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety.
Typically, when X4 is N, A6 is C.
Typically, when X4 is C, A6 is N.
Typically, no more than two of X1, X2, X3 and X4 are N.
In one embodiment of the first aspect of the invention :
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is N, C-H, C-Hal or C-RX3; and
X4 is C; provided that no more than two of X1, X2 and X3 are N.
More typically:
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is C-H, C-Hal or C-RX3; and
X4 is C.
In one embodiment of the first aspect of the invention, RX1 and RX3 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2 or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton. More typically, RX1 and RX3 are each independently selected from a C1-C4 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton . More typically still, RX1 and RX3 are each independently selected from a methyl, fluoromethyl, methoxy or fluoromethoxy group. Yet more typically, RX1 and RX3 are each independently selected from a methyl or fluoromethyl group.
In a further embodiment:
X1 is N, C-H or C-Hal;
X2 is N;
X3 is N, C-H or C-Hal; and X4 is N or C; provided that no more than three of X1, X2, X3 and X4 are N. Typically in such an embodiment, no more than two of X1, X2, X3 and X4 are N.
Typically in such an embodiment:
X1 is N, C-H or C-Hal;
X2 is N;
X3 is N, C-H or C-Hal; and X4 is C; provided that no more than two of X1, X2 and X3 are N.
More typically in such an embodiment:
X1 is N, C-H or C-Hal;
X2 is N;
X3 is C-H or C-Hal; and X4 is C.
Yet more typically:
X1 is N or C-H;
X2 is N;
X3 is C-H; and
X4 is C.
In one embodiment:
X1 is N;
X2 is N;
X3 is C-H, C-Hal or C-RX3; and
X4 is C.
Typically in such an embodiment, X3 is C-H or C-Hal. More typically, X3 is C-H.
As stated in accordance with the first aspect of the invention :
Q1 is O, S, N, N-H, N-RQ1, C-H, C-Hal, or C-R«2;
RQ1 is selected from a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety, provided that the atom of RQ1 that is directly attached to the nitrogen atom of N-RQ1 is a carbon atom; and
RQ2 is selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety.
In one embodiment of the first aspect of the invention, RQ1 and RQ2 are each independently selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-RQ3 group,
wherein RQ3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. More typically, RQ1 and RQ2 are each independently selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl or fluorocyclopropylmethyl group. More typically still, RQ1 and RQ2 are each independently selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group. Yet more typically, RQ1 and RQ2 are each independently selected from a methyl or fluoromethyl group.
Typically, Q1 is O, S, N-H, N-RQ1, C-H, C-Hal, or C-RQ2. More typically, Q1 is O, S, N-H or N-RQ1. For example, Q1 may be O, S, N-H or N-RQ1, wherein RQ1 is selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-RQ3 group, wherein RQ3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
More typically still, Q1 is S, N-H or N-RQ1. Typically in such an embodiment, RQ1 is a methyl or fluoromethyl group.
In one embodiment, Q1 is S.
In another embodiment, Q1 is O.
In yet another embodiment, Q1 is N-H or N-RQ1, wherein RQ1 is a methyl or fluoromethyl group. Typically in such an embodiment, Q1 is N-H.
As stated in accordance with the first aspect of the invention :
A1 is N, C-H, C-Hal or C-RA1;
A2 is N, C-H, C-Hal or C-RA2;
A3 is N, C-H, C-Hal or C-RA3;
A4 is N, C-H, C-Hal or C-RA4; and
A5 is N or C; provided that no more than three of A1, A2, A3, A4 and A5 are N; and
RA1, RA2, RA3 and RA4 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally
be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety.
Typically, no more than two of A1, A2, A3, A4 and A5 are N. More typically, no more than one of A1, A2, A3, A4 and A5 is N.
Typically, when A5 is N, X4 is N, A6 is C and Q1 is N, C-H, C-Hal, or C-RQ2. More typically, when A5 is N, X4 is N, A6 is C and Q1 is C-H, C-Hal, or C-RQ2.
Typically, where Q1 is O, S, N-H or N-RQ1, A5 is C.
In one embodiment,
A1 is N, C-H, C-Hal or C-RA1;
A2 is N, C-H, C-Hal or C-RA2;
A3 is N, C-H, C-Hal or C-RA3;
A4 is N, C-H, C-Hal or C-RA4; and
A5 is C; provided that no more than two of A1, A2, A3 and A4 are N.
Typically in such an embodiment, no more than one of A1, A2, A3 and A4 is N. Typically, where one of A1, A2, A3 and A4 is N, A2 is N or A3 is N. More typically, A3 is N.
In a further embodiment,
A1 is C-H C-Hal or C-RA1;
A2 is C-H, C-Hal or C-RA2;
A3 is C-H, C-Hal or C-RA3;
A4 is C-H, C-Hal or C-RA4; and
A5 is C.
Typically in the above embodiments, no more than two of A1, A2, A3 and A4 are C-RA1, C-RA2, C-RA3 or C-RA4. More typically, no more than one of A1, A2, A3 and A4 is C-RA1, C-RA2, C-RA3 or C-RA4.
In one embodiment, RA1, RA2, RA3 and RA4 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2 or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally
include one or two heteroatoms each independently selected from N and O in its carbon skeleton. More typically, RA1, RA2, RA3 and RA4 are each independently selected from a C1-C4 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton . More typically still, RA1, RA2, RA3 and RA4 are each independently selected from a methyl, fluoromethyl, methoxy or fluoromethoxy group. Yet more typically, RA1, RA2, RA3 and RA4 are each independently selected from a methyl or fluoromethyl group.
In another embodiment,
A1 is N, C-H or C-Hal;
A2 is N, C-H or C-Hal;
A3 is N, C-H or C-Hal;
A4 is N, C-H or C-Hal; and
A5 is C; provided that no more than two of A1, A2, A3 and A4 are N.
Typically in such an embodiment, no more than one of A1, A2, A3 and A4 is N. Typically, where one of A1, A2, A3 and A4 is N, A2 is N or A3 is N. More typically, A3 is N.
In a further embodiment,
A1 is C-H or C-Hal;
A2 is C-H or C-Hal;
A3 is C-H or C-Hal;
A4 is C-H or C-Hal; and A5 is C.
Most typically, A1 is C-H, A2 is C-H, A3 is C-H, A4 is C-H and A5 is C.
As stated in accordance with the first aspect of the invention, A6 is N or C. Typically, A6 is N.
As stated in accordance with the first aspect of the invention, each Hal is independently selected from a fluoro, chloro, bromo or iodo group. Typically, each Hal is independently selected from a fluoro, chloro or bromo group.
In one embodiment of the first aspect of the invention, the compound is a compound of Formula (V) :
Formula (V) wherein R1, R2, R3, X1 and Q1 are as defined in accordance with Formula (I).
In another embodiment of the first aspect of the invention, the compound is a compound of Formula (VI) :
Formula (VI) wherein R1, R2, X1, Q1, L3, R31 and R32 are as defined in accordance with Formula (I).
In a further embodiment of the first aspect of the invention, the compound is a compound of Formula (VII) :
Formula (VII)
wherein R1, R2, X1, Q1, L4 and R41 are as defined in accordance with Formula (I).
In yet another embodiment of the first aspect of the invention, the compound is a compound of Formula (VIII) :
Formula (VIII) wherein R1, R2, X1, Q1, L5 and R51 are as defined in accordance with Formula (I).
As will be understood, insofar as practical, embodiments directed to one substituent or moiety (such as a given R or X group) may be read in conjunction with embodiments directed to a different substituent or moiety.
For example, in a first exemplary embodiment, there is provided a compound of Formula (I) as defined above, wherein :
R1 is a Ci-C8 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, wherein the hydrocarbyl group optionally includes one or two heteroatoms each independently selected from N and O in its carbon skeleton ; and
R2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group; or
R1 and R2 together with the nitrogen atom to which they are attached form a 4- to 7-membered monocyclic group or a 6- to 12-membered bicyclic group, wherein the monocyclic or the bicyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo ( = 0), -OH, -NH2 or a Ci-Ce saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton;
R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a sp2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp2 hybridised carbon atom; or
R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a sp2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp2 hybridised carbon atom; or
R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a sp2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp2 hybridised carbon atom;
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is C-H, C-Hal or C-RX1;
X4 is C;
RX1 and RX3 are each independently selected from a C1-C4 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton;
Q1 is O, S, N-H or N-RQ1;
RQ1 is selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-RQ3 group;
RQ3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group;
A1 is N, C-H, C-Hal or C-RA1;
A2 is N, C-H, C-Hal or C-RA2;
A3 is N, C-H, C-Hal or C-RA3;
A4 is N, C-H, C-Hal or C-RA4;
A5 is C; and
RA1, RA2, RA3 and RA4 are each independently selected from a C1-C4 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may
optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton; provided that no more than one of A1, A2, A3 and A4 is N; and provided that no more than two of A1, A2, A3 and A4 are C-RA1, C-RA2, C-RA3 or C-RA4;
A6 is N; and each Hal is independently selected from a fluoro, chloro or bromo group.
Typically in accordance with the first exemplary embodiment, the carbon atom of R3 that is directly attached to the remainder of the compound of Formula (I) is the carbon atom of an amide group.
More typically in accordance with the first exemplary embodiment:
R31 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R31 that is directly attached to the nitrogen atom of N-R31 is a carbon atom;
R32 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R32 that is directly attached to the nitrogen atom of NH-R32 is a carbon atom that is not substituted with an oxo (=0) group; or R31 and R32 together form a C2-C6 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups
and/or a single oxo (=0) group and/or one, two, three or four groups R33, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a bond or a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond; and each R34 is independently selected from a methyl or a fluoromethyl group; or (ii) R3 has the formula :
wherein :
R41 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the
hydrocarbyl group of R41 that is directly attached to the nitrogen atom of N-R41 is a carbon atom;
L4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL4, provided that the carbon atom of the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the oxygen atom of the -OH group is not substituted with an oxo (=0) group; each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL4 and R41 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R44; and each R44 is independently selected from a methyl or a fluoromethyl group; or (iii) R3 has the formula:
wherein :
R51 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R51 that is directly attached to the nitrogen atom of N-R51 is a carbon atom;
L5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL5, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the
-CH2CH2-NH-CH2CH2- group that is directly attached to the sulphur atom of the -SH group is not substituted with an oxo (=0) group; each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL5 and R51 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R54; and each R54 is independently selected from a methyl or a fluoromethyl group; provided that in each of options (i), (ii) and (iii) the group R3 contains no more than 12 carbon atoms.
Typically in accordance with the first exemplary embodiment, Q1 is S or N-H.
In a second exemplary embodiment, there is provided a compound of Formula (VI) as defined above, wherein :
XI is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group;
R1 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted; or
R1 has the formula -I -R10, wherein L1 is a C1-C2 alkylene or C1-C2 fluoroalkylene group, and R10 is a 5- or 6-membered heteroaryl group; or
R1 is selected from a -(C(R101)2)2-X10-R102 or -(C(R101)2)2-X10-(C(R101)2)2-X11-R102 group;
X10 is selected from O or NR103;
XII is selected from O or NR104; each R101 is hydrogen;
R102 is selected from a methyl, ethyl, isopropyl or cyclopropyl group, any of which may optionally be fluoro substituted;
R103 is selected from hydrogen or a methyl or fluoromethyl group; and
R104 is selected from hydrogen or a methyl or fluoromethyl group; or a single R101 and R103, or a single R101 and R104, or R103 and R104 together form a -(CH2)2- group; provided that any -(C(R101)2)2-X10-R102 or -(C(R101)2)2-X10-(C(R101)2)2-X11-R102 group contains no more than 8 carbon atoms;
R2 is selected from hydrogen or a methyl or fluoromethyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
In a third exemplary embodiment, there is provided a compound of Formula (Via):
Formula (Via) wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; n is 1 or 2; m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10; each R11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R11 are selected from a methyl or fluoromethyl group;
X12 is O or NR12;
R12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R120 group;
R120 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34;
or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
In a fourth exemplary embodiment, there is provided a compound of Formula (VI) as defined above, wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group;
R1 and R2 together with the nitrogen atom to which they are attached form a pyrrolidinyl or piperidinyl group, wherein the pyrrolidinyl or piperidinyl group is substituted with an -NR13R14 group such that the nitrogen atom of the -NR13R14 group is not directly attached to a carbon atom that in turn is directly attached to the ring nitrogen atom of the pyrrolidinyl or piperidinyl group;
R13 and R14 are each independently selected from hydrogen or a methyl or fluoromethyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group;
or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
In a fifth exemplary embodiment, there is provided a compound of Formula (VI) as defined above, wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group;
R1 and R2 together with the nitrogen atom to which they are attached form a 8- or 9-membered fused bicyclic group, such that the nitrogen atom of -NRXR2 is a ring atom of a first 5- or 6-membered ring of the fused bicyclic group, and the first 5- or 6- membered ring is fused to a second 5-membered ring of the fused bicyclic group, wherein the first 5- or 6-membered ring is not aromatic and is unsubstituted, and the second 5-membered ring is an unsubstituted 5-membered heteroaryl ring comprising a NH group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group;
or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; j is 0, 1, 2 or 3; k is 0, 1, 2 or 3; p is 0, 1, 2 or 3; and q is 0, 1, 2 or 3; provided that: j + k = 2 or 3; p + q = 2 or 3; when j = 0, q is 1, 2 or 3; when k = 0, p is 1, 2 or 3; when p = 0, k is 1, 2 or 3; and when q = 0, j is 1, 2 or 3; and wherein :
r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group;
R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; each R16 is independently selected from a methyl or fluoromethyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
Typically in accordance with the sixth exemplary embodiment: j is 1; k is 1;
p is 1 or 2; q is 1 or 2; r is 0; and s is 0.
Formula (Vic) wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; r is 0, 1 or 2; s is 0, 1 or 2; t is 1 or 2; each R16 is independently selected from a methyl or fluoromethyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and
each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
Formula (Vid) wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; j is 0, 1, 2 or 3; and k is 0, 1, 2 or 3; provided that j + k = 2 or 3; and wherein : v is 1 or 2; r is 0, 1 or 2; s is 0, 1 or 2; each R16 is independently selected from a methyl or fluoromethyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group
may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
Formula (Vie) wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group;
X15 is O or NR15; j is 0, 1, 2, 3 or 4; k is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; and q is 0, 1, 2, 3 or 4; provided that: j + k = 3 or 4; p + q = 3 or 4; when j = 0, q is 1, 2, 3 or 4 and p is 1, 2, 3 or 4; when k = 0, q is 1, 2, 3 or 4 and p is 1, 2, 3 or 4; when p = 0, k is 1, 2, 3 or 4 and j is 1, 2, 3 or 4; and when q = 0, k is 1, 2, 3 or 4 and j is 1, 2, 3 or 4; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group;
R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; each R16 is independently selected from a methyl or fluoromethyl group;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group;
or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3— NHR32 contains no more than 12 carbon atoms.
Formula (VIf) wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; w is 1 or 2;
X15 is O or NR15;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group;
R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; one R17 and one R18 together form a -CH2- or -CH2CH2- group; each remaining R17 and R18 is hydrogen;
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group; or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R31)-L3-NHR32 contains no more than 12 carbon atoms.
Typically in accordance with any of the second to the tenth exemplary embodiments, Q1 is S or N-H.
In one aspect of any of the second to the tenth exemplary embodiments:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group;
provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an aspect, R31 is hydrogen.
For example, there may be provided a compound of Formula (VIb) of the sixth exemplary embodiment wherein:
Q1 is S or N-H;
R31 is hydrogen;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C3 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; and each RL3 is independently selected from a methyl or a fluoromethyl group.
In another aspect of any of the second to the tenth exemplary embodiments:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-NH-CH2CH2- group, wherein the alkylene or the -CH2CH2-NH-CH2CH2- group is substituted with one or two groups RL3, and wherein the alkylene or the -CH2CH2-NH-CH2CH2- group may optionally be further substituted with one or more fluoro groups; one RL3 and R32 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; the second RL3, if present, is selected from a methyl or a fluoromethyl group; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an aspect, R31 is hydrogen.
For example, there may be provided a compound of Formula (VIb) of the sixth exemplary embodiment wherein:
Q1 is S or N-H;
R31 is hydrogen;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-NH-CH2CH2- group, wherein the alkylene or the -CH2CH2-NH-CH2CH2- group is substituted with one or two groups RL3, and wherein the alkylene or the -CH2CH2-NH-CH2CH2- group may optionally be further substituted with one or more fluoro groups; one RL3 and R32 together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; the second RL3, if present, is selected from a methyl or a fluoromethyl group; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an example:
L3 is a C2-C5 straight-chained alkylene group, wherein the alkylene group is substituted with one or two groups RL3, and wherein the alkylene group may optionally be further substituted with one or more fluoro groups; and the one RL3 and R32 together with the atoms of the L3-NH group to which they are attached form a pyrrolidinyl or piperidinyl group.
In yet another aspect of any of the second to the tenth exemplary embodiments:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group is substituted with two groups RL3, and wherein the alkylene group may optionally be substituted with one or more fluoro groups; and the two groups RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; provided that the group R3 contains no more than 12 carbon atoms.
Typically in such an aspect, R31 is hydrogen.
For example, there may be provided a compound of Formula (VIb) of the sixth exemplary embodiment wherein:
Q1 is S or N-H;
R31 is hydrogen;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups;
L3 is a C2-C4 straight-chained alkylene group, wherein the alkylene group is substituted with two groups RL3, and wherein the alkylene group may optionally be substituted with one or more fluoro groups; and the two groups RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group; provided that the group R3 contains no more than 12 carbon atoms.
Formula (Vila) wherein :
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; n is 1 or 2; m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10; each R11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R11 are selected from a methyl or fluoromethyl group;
X12 is O or NR12;
R12 is selected from hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R120 group;
R120 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group;
R41 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL4; each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL4 and R41 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R44; and each R44 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R41)-L4-OH contains no more than 12 carbon atoms.
X1 is N or C-H;
Q1 is O, S, N-H or N-RQ1;
RQ1 is a methyl or fluoromethyl group; j is 0, 1, 2 or 3; k is 0, 1, 2 or 3; p is 0, 1, 2 or 3; and q is 0, 1, 2 or 3; provided that:
j + k = 2 or 3; p + q = 2 or 3; when j = 0, q is 1, 2 or 3; when k = 0, p is 1, 2 or 3; when p = 0, k is 1, 2 or 3; and when q = 0, j is 1, 2 or 3; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group;
R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; each R16 is independently selected from a methyl or fluoromethyl group;
R51 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
L5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL5; each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL5 and R51 may together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R54; and each R54 is independently selected from a methyl or a fluoromethyl group; provided that the group -CO-N(R51)-L5-SH contains no more than 12 carbon atoms.
Typically in accordance with the eleventh or twelfth exemplary embodiments, Q1 is S or N-H.
In one aspect of any of the above embodiments, the compound of the first aspect of the invention has a molecular weight of from 300 to 1000 Da. Typically, the compound of the first aspect of the invention has a molecular weight of from 350 to 750 Da.
More typically, the compound of the first aspect of the invention has a molecular weight of from 400 to 600 Da.
A third aspect of the invention provides a pharmaceutically acceptable salt and/or solvate and/or prodrug of any compound of the first or second aspect of the invention.
In one embodiment, the third aspect of the invention provides a pharmaceutically acceptable salt and/or solvate of any compound of the first or second aspect of the invention. For example, the third aspect of the invention may provide (i) a pharmaceutically acceptable salt of any compound of the first or second aspect of the invention, or (ii) a pharmaceutically acceptable solvate of any compound of the first or second aspect of the invention, or (iii) a pharmaceutically acceptable solvate of a pharmaceutically acceptable salt of any compound of the first or second aspect of the invention.
The compounds of the present invention can be used both, in their free base form and their acid addition salt form. For the purposes of this invention, a "salt" of a compound of the present invention includes an acid addition salt. Acid addition salts are
preferably pharmaceutically acceptable, non-toxic addition salts with suitable acids, including but not limited to inorganic acids such as hydrohalogenic acids (for example, hydrofluoric, hydrochloric, hydrobromic or hydroiodic acid) or other inorganic acids (for example, nitric, perchloric, sulfuric or phosphoric acid); or organic acids such as organic carboxylic acids (for example, propionic, butyric, glycolic, lactic, mandelic, citric, acetic, trifluoroacetic, benzoic, salicylic, succinic, malic or hydroxysuccinic, tartaric, fumaric, maleic, hydroxymaleic, mucic or galactaric, gluconic, pantothenic or pamoic acid), organic sulfonic acids (for example, methanesulfonic, trifluoromethanesulfonic, ethanesulfonic, 2-hydroxyethanesulfonic, benzenesulfonic, toluene-p-sulfonic, naphthalene-2-sulfonic or camphorsulfonic acid) or amino acids (for example, ornithinic, glutamic or aspartic acid). The acid addition salt may be a mono-, di-, tri- or multi-acid addition salt. A preferred salt is a hydrohalogenic, sulfuric, phosphoric or organic acid addition salt. A preferred salt is a hydrochloric acid addition salt.
Where a compound of the invention includes a quaternary ammonium group, typically the compound is used in its salt form. The counter ion to the quaternary ammonium group may be any pharmaceutically acceptable, non-toxic counter ion. Examples of suitable counter ions include the conjugate bases of the protic acids discussed above in relation to acid addition salts.
The compounds of the present invention can also be used both, in their free acid form and their salt form. For the purposes of this invention, a "salt" of a compound of the present invention includes one formed between a protic acid functionality (such as a carboxylic acid group) of a compound of the present invention and a suitable cation. Suitable cations include, but are not limited to lithium, sodium, potassium, magnesium, calcium and ammonium. The salt may be a mono-, di-, tri- or multi-salt. Preferably the salt is a mono- or di-lithium, sodium, potassium, magnesium, calcium or ammonium salt. More preferably the salt is a mono-sodium salt or a monopotassium salt.
Preferably any salt is a pharmaceutically acceptable non-toxic salt. However, in addition to pharmaceutically acceptable salts, other salts are included in the present invention, since they have potential to serve as intermediates in the purification or preparation of other, for example, pharmaceutically acceptable salts, or are useful for identification, characterisation or purification of the free acid or base.
The compounds and/or salts of the present invention may be anhydrous or in the form of a hydrate (e.g. a hemihydrate, monohydrate, dihydrate or trihydrate) or other solvate. Such other solvates may be formed with common organic solvents, including but not limited to, alcoholic solvents e.g. methanol, ethanol or isopropanol.
In one embodiment, the third aspect of the invention provides a prodrug of any compound of the first or second aspect of the invention. Similarly, the third aspect of the invention may provide a pharmaceutically acceptable salt and/or solvate of such a prodrug. For example, the third aspect of the invention may provide (i) a pharmaceutically acceptable salt of a prodrug, or (ii) a pharmaceutically acceptable solvate of a prodrug, or (iii) a pharmaceutically acceptable solvate of a pharmaceutically acceptable salt of a prodrug.
In some embodiments of the present invention, therapeutically inactive prodrugs are provided. Prodrugs are compounds which, when administered to a subject such as a human, are converted in whole or in part to a compound of the invention. In most embodiments, the prodrugs are pharmacologically inert chemical derivatives that can be converted in vivo to the active drug molecules to exert a therapeutic effect. Any of the compounds described herein can be administered as a prodrug to increase the activity, bioavailability, or stability of the compound or to otherwise alter the properties of the compound. Typical examples of prodrugs include compounds that have biologically labile protecting groups on a functional moiety of the active compound. Prodrugs include, but are not limited to, compounds that can be oxidized, reduced, aminated, deaminated, hydroxylated, dehydroxylated, hydrolyzed, dehydrolyzed, alkylated, dealkylated, acylated, deacylated, phosphorylated, and/or dephosphorylated to produce the active compound. The present invention also encompasses salts and solvates of such prodrugs as described above.
The compounds, salts, solvates and prodrugs of the present invention may be obtained in all grades of purity, for example via conventional techniques such as recrystallisation and/or column chromatography.
For example, the compounds, salts, solvates and prodrugs of the present invention may be at least 90% pure, at least 95% pure, at least 99% pure, at least 99.5% pure or at least 99.9% pure, as measured by HPLC.
Alternately, the compounds, salts, solvates and prodrugs of the present invention may be at least 90% pure, at least 95% pure, at least 99% pure, at least 99.5% pure or at least 99.9% pure, as measured by LCMS.
Alternately still, the compounds, salts, solvates and prodrugs of the present invention may be at least 90% pure, at least 95% pure, at least 99% pure, at least 99.5% pure or at least 99.9% pure, as measured by XH NMR.
The compounds, salts, solvates and prodrugs of the present invention may contain at least one chiral centre. The compounds, salts, solvates and prodrugs may therefore exist in at least two isomeric forms. The present invention encompasses racemic mixtures of the compounds, salts, solvates and prodrugs of the present invention as well as enantiomerically enriched and substantially enantiomerically pure isomers. For the purposes of this invention, a "substantially enantiomerically pure" isomer of a compound comprises less than 5% of other isomers of the same compound, more typically less than 2%, and most typically less than 0.5% by weight.
The compounds, salts, solvates and prodrugs of the present invention may contain any stable isotope including, but not limited to 12C, 13C, 1H, 2H (D), 14N, 15N, 16O, 17O, 18O, 19F and 127I, and any radioisotope including, but not limited to X1C, 14C, 3H (T), 13N, 15O, 18F, 123I, 124I, 125I and 131I.
The compounds, salts, solvates and prodrugs of the present invention may be in any polymorphic or amorphous form.
A fourth aspect of the invention provides an antibody-drug conjugate comprising a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention. For the avoidance of doubt, it will be understood that the compound, salt, solvate or prodrug needs to lose at least one atom such as a hydrogen atom in order to form the link to the antibody.
The compound, salt, solvate or prodrug of the present invention comprises a primary or a secondary amine, a -OH group, or a -SH group, each of which can be used to link the compound, salt, solvate or prodrug to an antibody, with the loss of a hydrogen atom from the amine, -OH or -SH group. For example, the antibody-drug conjugate can have the Formula (IIA), (IIIA) or (IVA) :
Formula (IVA) wherein LAB is a linker, AB is an antibody, and Xx-X4, Ax-A6, Q1, R31, R32, L3, R41, L3, R51 and L5 are as defined in accordance with Formula (I).
Typical antibodies that may be used to prepare the antibody-drug conjugate of the fourth aspect of the invention are:
Cetuximab
Trastuzumab
Brentuximab
• ado-Trastuzumab
• Polatuzumab
• Inotuzumab
• Gemtuzumab
• Sacituzumab
• Enfortumab
• Loncastuximab
• fam-Trastuzumab
• Tisotumab
• Belantamab
• Mirvetuximab
• Amivantamab
Thus, where the antibody-drug conjugate has the Formula (IIA), (IIIA) or (IVA), the antibody AB may be selected from any of the above.
The linker LAB is typically a C20-C100 saturated or unsaturated hydrocarbylene group, wherein the hydrocarbylene group may be straight-chained or branched, or be or include one or more cyclic groups, wherein the hydrocarbylene group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbylene group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbylene group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO(=NH)- moiety.
More typically, the linker LAB is a C30-C70 or C40-C60 partially unsaturated hydrocarbylene group, wherein the hydrocarbylene group may be straight-chained or branched, or be or include one, two, three, four, five or six cyclic groups, wherein the hydrocarbylene group may optionally be substituted with one or more halo groups, wherein the hydrocarbylene group includes from 10 to 30 oxygen atoms, from 5 to 15 nitrogen atoms and from 0 to 5 sulphur atoms in its carbon skeleton, wherein any -S- moiety in the hydrocarbylene group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S( = NH)- or -SO( = NH)- moiety.
Typically, the linker LAB comprises a maleimide moiety, one or more PEG spacers, optionally a BCN moiety, a valine-citrulline (Val-Cit) dipeptide, and a paraaminobenzyl (PAB) spacer.
Typically, the hydrocarbylene group of linker LAB has a chain length of from 20 to 80 atoms. More typically, the hydrocarbylene group has a chain length of from 30 to 70 atoms, or from 40 to 60 atoms.
As will be understood, the "chain length" of a hydrocarbylene group refers to the number of atoms of the hydrocarbylene group that are bonded to each other in a continuous chain between the two points of attachment of the hydrocarbylene group to the remainder of the molecule, as measured by the shortest route. By way of example, structure (C) has a chain length between A and B of 3 atoms, whereas structure (D) has a chain length between A and B of 5 atoms:
Typical linkers that may be used to link a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, to an antibody to prepare the antibody-drug conjugate of the fourth aspect of the invention are: maleimide-valine-citruline-PABC, including those comprising PEG and/or a
BCN-derived moiety thioether hydrazone and disulfide
CL2a linker maleimide-valine-alanine-PABC maleimide tetrapeptide linker (GGFG)
Maleidocaproic linker
Sulfo-SPDB disulfide
Thus, where the antibody-drug conjugate has the Formula (IIA), (IIIA) or (IVA), the linker LAB may be selected from any of the above.
In one embodiment of the fourth aspect of the invention, the antibody-drug conjugate is selected from :
Cetuximab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8- oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]-heptadeca- 2,4,6,9,12,14,16-heptaene-9-carboxamide;
Cetuximab-mal-PEG6-vc-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin- 2-yl) methyl] -11-th ia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17] -heptadeca - 2,4,6,9,12,14,16-heptaene-9-carboxamide;
Trastuzumab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)- 8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]-heptadeca- 2,4,6,9,12,14,16-heptaene-9-carboxamide;
Sacituzumab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-
8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]-heptadeca- 2,4,6,9,12,14,16-heptaene-9-carboxamide;
Cetuximab-mal-PEG6-vc-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4- c]pyrrol-5-yl)-8-oxo-N-pyrrolidin-3-yl-l,3,5,l l- tetrazatetracyclo[8.7.0.02,7.012,17]-heptadeca-2,4,6,9,12(17),13,15- heptaene-9-carboxamide;
Cetuximab-mal-PEG6-vc-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4- c]pyrrol-5-yl)-8-oxo-N-(4-piperidyl)-l,3,5,l l- tetrazatetracyclo[8.7.0.02'7.012'17]-heptadeca-2,4,6,9,12(17),13,15-heptaene-
9-carboxamide;
Cetuximab-mal-PEG6-vc-N-(2-aminoethyl)-4-(2-methyl-l,3,3a,4,6,6a- hexahydropyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-l l-thia-l,3,5-triazatetracyclo- [8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9-carboxamide;
Cetuximab-mal-PEG6-vc-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4- c]pyrrol-5-yl)-8-oxo-N-(4-piperidyl)-ll-thia-l,3,5- triazatetracyclo[8.7.0.02'7.012'17]-heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carboxamide;
Am ivanta ma b-mal-PEG8-vc-4-2-(5-methyl hexa hydropyrrolo[3,4-c] pyrrol- 2(lH)-yl)-5-oxo-N-(pyrrolidin-2-ylmethyl)-5H-benzo[4’,5’]thiazolo- [3’, 2’ : l,6]pyrido[2,3-d]-pyrimidine-6-carboxamide;
Cetuximab-mal-PEG8-vc-N-(aminomethyl)-4-(2-methyl-l,3,3a,4,6,6a- hexahydropyrrolo-[3,4-c]pyrrol-5-yl)-8-oxo-l,3,5,ll-tetrazatetracyclo- [8.7.0.02,7.012,17]-heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carboxamide;
Cetuximab-mal-PEG8-vc-2-(4-methyl-l,4-diazepan-l-yl)-5-oxo-N-(piperidin-4- yl)-5,7-dihydrobenzo[4',5']imidazo[l',2': l,6]pyrido[2,3-d]pyrimidine-6- carboxamide; or a pharmaceutically acceptable salt and/or solvate thereof.
A fifth aspect of the invention provides a pharmaceutical composition comprising a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, and a pharmaceutically acceptable excipient.
Conventional procedures for the selection and preparation of suitable pharmaceutical formulations are described in, for example, "Aulton's Pharmaceutics - The Design and Manufacture of Medicines", M. E. Aulton and K. M. G. Taylor, Churchill Livingstone Elsevier, 4th Ed., 2013.
Pharmaceutically acceptable excipients including adjuvants, diluents or carriers that may be used in the pharmaceutical compositions of the invention are those conventionally employed in the field of pharmaceutical formulation, and include, but are not limited to, sugars, sugar alcohols, starches, ion exchangers, alumina, aluminium stearate, lecithin, serum proteins such as human serum albumin, buffer substances such as phosphates, glycerine, sorbic acid, potassium sorbate, partial glyceride mixtures of saturated vegetable fatty acids, water, salts or electrolytes such as protamine sulfate, disodium hydrogen phosphate, potassium hydrogen phosphate, sodium chloride, zinc salts, colloidal silica, magnesium trisilicate, polyvinylpyrrolidone, cellulose-based substances, polyethylene glycol, sodium carboxymethylcellulose, polyacrylates, waxes, polyethylene-polyoxypropylene-block polymers, polyethylene glycol and wool fat.
A sixth aspect of the invention provides a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, for use in medicine, and/or for use in the treatment or prevention of a disease, disorder or condition. Typically, the use comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition to a subject.
The term "treatment" as used herein refers equally to curative therapy, and ameliorating or palliative therapy. The term includes obtaining beneficial or desired physiological results, which may or may not be established clinically. Beneficial or desired clinical results include, but are not limited to, the alleviation of symptoms, the prevention of symptoms, the diminishment of extent of disease, the stabilisation (i.e., not worsening) of a condition, the delay or slowing of progression/worsening of a condition/symptom, the amelioration or palliation of a condition/symptom, and remission (whether partial or total), whether detectable or undetectable. The term "palliation", and variations thereof, as used herein, means that the extent and/or undesirable manifestations of a physiological condition or symptom are lessened and/or time course of the progression is slowed or lengthened, as compared to not administering a compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition of the present invention. The term "prevention" as used herein in relation to a disease, disorder or condition, relates to prophylactic or preventative therapy, as well as therapy to reduce the risk of developing the disease, disorder or condition. The term "prevention" includes both the avoidance of occurrence of the disease, disorder or condition, and the delay in onset of the disease, disorder or condition. Any statistically significant (p < 0.05) avoidance of occurrence, delay in onset or reduction in risk as measured by a controlled clinical trial may be deemed a prevention of the disease, disorder or condition. Subjects amenable to prevention include those at heightened risk of a disease, disorder or condition as identified by genetic or biochemical markers. Typically, the genetic or biochemical markers are appropriate to the disease, disorder or condition under consideration.
A seventh aspect of the invention provides the use of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, in the manufacture of a medicament for the treatment or prevention of a disease, disorder or condition. Typically, the treatment or prevention comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or medicament to a subject.
An eighth aspect of the invention provides a method of treatment or prevention of a disease, disorder or condition, the method comprising the step of administering an effective amount of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, to thereby treat or
prevent the disease, disorder or condition. Typically, the administration is to a subject in need thereof.
A ninth aspect of the invention provides a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, for use in the treatment or prevention of a cancer. Typically, the use comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition to a subject.
A tenth aspect of the invention provides the use of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, in the manufacture of a medicament for the treatment or prevention of a cancer. Typically, the treatment or prevention comprises the administration of the compound, salt, solvate, prodrug, antibody-drug conjugate or medicament to a subject.
An eleventh aspect of the invention provides a method of treatment or prevention of a cancer, the method comprising the step of administering an effective amount of a compound of the first or second aspect of the invention, or a pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or an antibody-drug conjugate of the fourth aspect of the invention, or a pharmaceutical composition of the fifth aspect of the invention, to thereby treat or prevent the cancer. Typically, the administration is to a subject in need thereof.
The compound of the first or second aspect of the invention, or the pharmaceutically acceptable salt and/or solvate and/or prodrug of the third aspect of the invention, or the antibody-drug conjugate of the fourth aspect of the invention, or the pharmaceutical composition of the fifth aspect of the invention can be combined with other therapeutic agents and treatments, for example, to exploit synergies and enhance the cytotoxic activity in cancer treatment. For example, the compound, salt, solvate, prodrug, antibody-drug conjugate or pharmaceutical composition can used in combination with X-ray radiation; DNA alkylating agents like cisplatin; NU7441, an inhibitor of DNA repair regulating kinase DNA-PK; MK1775, an inhibitor of the cell cycle regulator WEE1 kinase; Pimozide, an inhibitor of the deubiquitinylation enzyme USP1; NSC697923, an inhibitor of ubiquitin conjugating enzyme UBE2N; APR-246, a
P53 activator; PAR.P inhibitors; topoisomerase 1 knockdown; HDAC inhibitors; lysosome inhibitors; and immunomodulators.
Unless stated otherwise, in any of the sixth to eleventh aspects of the invention, the subject may be any human or other animal. Typically, the subject is a mammal, more typically a human or a domesticated mammal such as a cow, pig, lamb, sheep, goat, horse, cat, dog, rabbit, mouse etc. Most typically, the subject is a human.
Any of the medicaments employed in the present invention can be administered by oral, parenteral (including intravenous, subcutaneous, intramuscular, intradermal, intratracheal, intraperitoneal, intraarticular, intracranial and epidural), airway (aerosol), rectal, vaginal, ocular or topical (including transdermal, buccal, mucosal, sublingual and topical ocular) administration.
Typically, the mode of administration selected is that most appropriate to the disorder, disease or condition to be treated or prevented.
For oral administration, the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the present invention will generally be provided in the form of tablets, capsules, hard or soft gelatine capsules, caplets, troches or lozenges, as a powder or granules, or as an aqueous solution, suspension or dispersion.
Tablets for oral use may include the active ingredient mixed with pharmaceutically acceptable excipients such as inert diluents, disintegrating agents, binding agents, lubricating agents, sweetening agents, flavouring agents, colouring agents and preservatives. Suitable inert diluents include sodium and calcium carbonate, sodium and calcium phosphate, and lactose. Corn starch and alginic acid are suitable disintegrating agents. Binding agents may include starch and gelatine. The lubricating agent, if present, may be magnesium stearate, stearic acid or talc. If desired, the tablets may be coated with a material, such as glyceryl monostearate or glyceryl distearate, to delay absorption in the gastrointestinal tract. Tablets may also be effervescent and/or dissolving tablets.
Capsules for oral use include hard gelatine capsules in which the active ingredient is mixed with a solid diluent, and soft gelatine capsules wherein the active ingredient is mixed with water or an oil such as peanut oil, liquid paraffin or olive oil.
Powders or granules for oral use may be provided in sachets or tubs. Aqueous solutions, suspensions or dispersions may be prepared by the addition of water to powders, granules or tablets.
Any form suitable for oral administration may optionally include sweetening agents such as sugar, flavouring agents, colouring agents and/or preservatives.
Formulations for rectal administration may be presented as a suppository with a suitable base comprising, for example, cocoa butter or a salicylate.
Formulations suitable for vaginal administration may be presented as pessaries, tampons, creams, gels, pastes, foams or spray formulations containing in addition to the active ingredient such carriers as are known in the art to be appropriate.
For parenteral use, the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the present invention will generally be provided in a sterile aqueous solution or suspension, buffered to an appropriate pH and isotonicity. Suitable aqueous vehicles include Ringer's solution and isotonic sodium chloride or glucose. Aqueous suspensions according to the invention may include suspending agents such as cellulose derivatives, sodium alginate, polyvinylpyrrolidone and gum tragacanth, and a wetting agent such as lecithin. Suitable preservatives for aqueous suspensions include ethyl and n-propyl p-hydroxybenzoate. The compounds of the invention may also be presented as liposome formulations.
For ocular administration, the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the invention will generally be provided in a form suitable for topical administration, e.g. as eye drops. Suitable forms may include ophthalmic solutions, gel-forming solutions, sterile powders for reconstitution, ophthalmic suspensions, ophthalmic ointments, ophthalmic emulsions, ophthalmic gels and ocular inserts. Alternatively, the compounds, salts, solvates or prodrugs of the invention may be provided in a form suitable for other types of ocular administration, for example as intraocular preparations (including as irrigating solutions, as intraocular, intravitreal or juxtascleral injection formulations, or as intravitreal implants), as packs or corneal shields, as intracameral, subconjunctival or retrobulbar injection formulations, or as iontophoresis formulations.
For transdermal and other topical administration, the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the invention will generally be provided in the
form of ointments, cataplasms (poultices), pastes, powders, dressings, creams, plasters or patches.
Suitable suspensions and solutions can be used in inhalers for airway (aerosol) administration.
The dose of the compounds, salts, solvates, prodrugs or antibody-drug conjugates of the present invention will, of course, vary with the disease, disorder or condition to be treated or prevented. In general, a suitable dose will be in the range of 0.01 to 500 mg per kilogram body weight of the recipient per day. The desired dose may be presented at an appropriate interval such as once every other day, once a day, twice a day, three times a day or four times a day. The desired dose may be administered in unit dosage form, for example, containing 1 mg to 50 g of active ingredient per unit dosage form.
All citations are incorporated herein by reference in their entirety.
For the avoidance of doubt, insofar as is practicable any embodiment of a given aspect of the present invention may occur in combination with any other embodiment of the same aspect of the present invention. In addition, insofar as is practicable it is to be understood that any preferred, typical or optional embodiment of any aspect of the present invention should also be considered as a preferred, typical or optional embodiment of any other aspect of the present invention.
References
1. Silverman, R. B. & Holladay, M. W. The Organic Chemistry of Drug Design and Drug Action. (Elsevier, 2014). doi: 10.1016/C2009-0-64537-2.
2. Cheung-Ong, K., Giaever, G. & Nislow, C. DNA-Damaging Agents in Cancer Chemotherapy: Serendipity and Chemical Biology. Chem. Biol. 20, 648-659 (2013).
3. Huppert, J. L. & Balasubramanian, S. Prevalence of quadruplexes in the human genome. Nucleic Acids Res. 33, 2908-2916 (2005).
4. Chambers, V. S. et al. High-throughput sequencing of DNA G-quadruplex structures in the human genome. Nat. Biotechnol. 33, 877-881 (2015).
5. Marsico, G. et al. Whole genome experimental maps of DNA G-quadruplexes in multiple species. Nucleic Acids Res. 47, 3862-3874 (2019).
6. Biffi, G., Tannahill, D., McCafferty, J. & Balasubramanian, S. Quantitative
visualization of DNA G-quadruplex structures in human cells. Nat. Chem. 5, 182-186 (2013).
7. Biffi, G., Tannahill, D., Miller, J., Howat, W. J. & Balasubramanian, S. Elevated levels of G-quadruplex formation in human stomach and liver cancer tissues. PLoS One 9, el02711 (2014).
8. Biffi, G., Di Antonio, M., Tannahill, D. & Balasubramanian, S. Visualization and selective chemical targeting of RIMA G-quadruplex structures in the cytoplasm of human cells. Nat. Chem. 6, 75-80 (2014).
9. Hansel-Hertsch, R. et al. G-quadruplex structures mark human regulatory chromatin. Nat. Genet. 48, 1267-1272 (2016).
10. Zheng, K. et al. Detection of genomic G-quadruplexes in living cells using a small artificial protein. Nucleic Acids Res. 48, 11706-11720 (2020).
11. Kwok, C. K., Marsico, G., Sahakyan, A. B., Chambers, V. S. & Balasubramanian, S. RG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome. Nat. Methods 13, 841-844 (2016).
12. Lyu, J., Shao, R., Kwong Yung, P. Y. & Elsasser, S. J. Genome-wide mapping of G-quadruplex structures with CUT&Tag. Nucleic Acids Res. 1-13 (2021) doi: 10.1093/nar/gkabl073.
13. Varshney, D., Spiegel, J., Zyner, K., Tannahill, D. & Balasubramanian, S. The regulation and functions of DNA and RNA G-quadruplexes. Nat. Rev. Mol. Cell Biol. 21, 459-474 (2020).
14. Sauer, M. & Paeschke, K. G-quadruplex unwinding helicases and their function in vivo . Biochem. Soc. Trans. 45, 1173-1182 (2017).
15. Lopes, J. et al. G-quadruplex-induced instability during leading-strand replication. EMBO J. 30, 4033-4046 (2011).
16. Ward, J. D., Barber, L. J., Petalcorin, M. I. R., Yanowitz, J. & Boulton, S. J. Replication blocking lesions present a unique substrate for homologous recombination. EMBO J. 26, 3384-3396 (2007).
17. Spiegel, J., Adhikari, S. & Balasubramanian, S. The Structure and Function of DNA G-Quadruplexes. Trends Chem. 2, 123-136 (2020).
18. Neidle, S. Quadruplex Nucleic Acids as Novel Therapeutic Targets. J. Med. Chem. 59, 5987-6011 (2016).
19. Yu, Z. et al. Chem-map profiles drug binding to chromatin in cells. Nat. Biotechnol. (2023) doi: 10.1038/s41587-022-01636-0.
20. Siddiqu i-Jain, A., Grand, C. L., Bearss, D. J. & Hurley, L. H. Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription. Proc. Natl. Acad. Sci. 99, 11593-11598 (2002).
21. Marchetti, C. et al. Targeting Multiple Effector Pathways in Pancreatic Ductal
Adenocarcinoma with a G-Quadruplex-Binding Small Molecule. J. Med. Chem. 61, 2500-2517 (2018).
22. Rodriguez, R. et al. Small-molecule-induced DNA damage identifies alternative DNA structures in human genes. Nat. Chem. Biol. 8, 301-310 (2012).
23. Sato, K. & Knipscheer, P. G-quadruplex resolution : From molecular mechanisms to physiological relevance. DNA Repair (Amst). 130, 103552 (2023).
24. Zyner, K. G. et al. Genetic interactions of G-quadruplexes in humans. Elife 8, 1- 40 (2019).
25. Xu, H. et al. CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours. Nat. Commun. 8, 14432 (2017).
26. Hilton, J. et al. Results of the phase I CCTG IND.231 trial of CX-5461 in patients with advanced solid tumors enriched for DNA-repair deficiencies. Nat. Commun. 13, 3607 (2022).
27. Masud, T. et al. Ubiquitin-mediated DNA damage response is synthetic lethal with G-quadruplex stabilizer CX-5461. Sci. Rep. 11, 9812 (2021).
28. Olivieri, M. et al. A Genetic Map of the Response to DNA Damage in Human Cells. Cell 182, 481-496. e21 (2020).
29. Zimmer, J. et al. Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex- Interacting Compounds. Mol. Cell 61, 449-460 (2016).
30. Ahmed, A. A. & Neidle, S. A G-Quadruplex-Binding Small Molecule and the HDAC Inhibitor SAHA (Vorinostat) Act Synergistically in Gemcitabine-Sensitive and Resistant Pancreatic Cancer Cells. Molecules 25, (2020).
31. Khot, A. et al. First-in-Human RNA Polymerase I Transcription Inhibitor CX-5461 in Patients with Advanced Hematologic Cancers: Results of a Phase I Dose- Escalation Study. Cancer Discov. 9, 1036-1049 (2019).
Examples - Compound Synthesis
All solvents, reagents and compounds were purchased and used without further purification unless stated otherwise.
NMR:
1H NMR, 13C NMR spectra and 2D NMR spectra were recorded on a Bruker Avance Neo 400 MHz NMR spectrometer at 25°C in CDCI3/MeOD/ DMSO-t/6/DMSO-t/6+D2O, respectively, residual undeuterated solvent as internal reference. Chemical shifts (6) are expressed in ppm and coupling constants (J) are given in Hz.
LCMS method:
All final compounds were purified to >95% purity as determined Shimadzu LC-20AD XR&MS 2020 with UV detection at 220 nm using the following method: Halo C18 column (5.0 pm, 3.0 mm x 30 mm), eluting with binary solvent systems A and B using a 5-95% B over 3.0 minutes gradient elution [A, H2O with 0.04% TFA; B, CH3CN with 0.02% TFA]; flow rate 1.0 mL/min. Mass spectral data were recorded on an Shimadzu LC-20AD XR&MS 2020 with UV detection, ESI.
Preparative HPLC method:
TFA as buffer: Preparative reversed-phase high pressure liquid chromatography (RP- HPLC) was performed using a Gilson 281 Semi-preparative HPLC system and Phenomenex Luna C18 column (5 pm, 100 mm x 40 mm), eluting with binary solvent systems A and B using a gradient elution [A, H2O with 0.1% TFA; B, CH3CN] with UV detection at 220 nm.
HCI as buffer: Preparative reversed-phase high pressure liquid chromatography (RP- HPLC) was performed using a Gilson 281 Semi-preparative HPLC system and Phenomenex Luna C18 column (5 pm, 100 mm x 40 mm), eluting with binary solvent systems A and B using a gradient elution [A, H2O with 0.04% HCI; B, CH3CN] with UV detection at 220 nm.
NH4HCO3 as buffer: Preparative reversed-phase high pressure liquid chromatography (RP-HPLC) was performed using a Gilson 281 Semi-preparative HPLC system and Waters Xbridge Prep OBD C18 (10 pm, 150 mm x 40 mm), eluting with binary solvent systems A and B using a gradient elution [A, H2O with lOmM NH4HCO3; B, CH3CN] with UV detection at 220 nm.
Route 1
Example 1: N-(2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide
2,4-Dichloropyrimidine-5-carbonyl chloride: A mixture of acid (1.00 g, 5.18 mmol, 1 eq) in SOCI2 (10.00 mL) was stirred at 65°C for 12 h. TLC showed the
reaction was completed. The mixture was concentrated in vacuum to give the desired product (1.00 g, 4.73 mmol, 91.28% yield) as a yellow solid. The crude product was used in the next step without further purification.
Ethyl 4-chloro-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9, 12, 14, 16-heptaene-9-carboxylate : To a mixture of acid chloride (0.5 g, 2.26 mmol, 1 eq) and MgC (322.71 mg, 3.39 mmol, 139.10 pL, 1.5 eq) in MeCN (10.00 mL) was added benzothiazole (621.09 mg, 2.94 mmol, 1.3 eq) and TEA (457.30 mg, 4.52 mmol, 629.02 pL, 2 eq) at -10°C under N2. The mixture was stirred at 20°C for 2 h, then to the mixture was added DIEA (457.30 mg, 4.52 mmol, 629.02 pL, 2 eq) and the reaction heated to 25°C and stirred for 10 h. LCMS showed the reaction was completed. The mixture was concentrated and the residue was triturated with MeCN (10 mL). The mixture was filtered and the solid was collected to give the desired product (0.22 g, 0.611 mmol, 27.06% yield) as yellow solid. The crude product was used in the next step without further purification. 1H NMR (400 MHz, CDCI3) 6 = 9.63 (s, 1H), 9.37 (br d, J= 8.3 Hz, 1H), 7.75 (br d, J= 7.6 Hz, 1H), 7.64 - 7.56 (m, 1H), 7.54 - 7.45 (m, 1H), 4.50 (q, J= 7.0 Hz, 2H), 1.49 (br t, J= 7.0 Hz, 3H).
Ethyl 4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate: To a mixture of ester (0.17 g, 472.51 pmol, 1 eq) in MeCN (5.00 mL) was added 1- methyl-l,4-diazepane (107.91 mg, 0.946 mmol, 2 eq) at 25°C under N2. The mixture was stirred at 25°C for 12 h. LCMS showed the reaction was completed. The mixture was concentrated in vacuum. The residue was triturated with MeCN (20 mL) for 10 min. Then the mixture was filtered and the solid was collected to afford the desired
product (0.14 g, 319.99 pmol, 67.72% yield) as yellow solid. LCMS (ESI+): m/z
438.4 (M + H)+, Rt: 0.466 min
tert-Butyl N-(2-{[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}ethyl)carbamate: To a solution of ethyl 4-(4-methyl-l,4-diazepan- l-yl)-8-oxo-l 1-th ia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17] heptadeca -
2,4,6,9,12, 14, 16-heptaene-9-carboxylate (0.5 g, 1.14 mmol, 1 eq) in DCM (5 mL) was added tert-butyl N-(2-aminoethyl)carbamate (366.19 mg, 2.29 mmol, 360.42 pL, 2 eq), the mixture was cooled at -5°C and added DBU (521.95 mg, 3.43 mmol, 516.78 pL, 3 eq) dropwise and AICI3 (243.81 mg, 1.83 mmol, 99.92 pL, 1.6 eq) in portions. The reaction was stirred at 25°C for 2 h. The reaction mixture was poured into 50% of NaOH aqueous solution (2 mL). The aqueous phase was extracted with dichloromethane (5 mL*2). The combined organic phases were concentrated in vacuum to give the title compound (500 mg, 842.91 pmol, 73.76% yield, 93% purity) as yellow solid. LCMS (ESI+): m/z 552.4 (M + H) +, Rt: 0.377 min.
N-(2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxamide: The solution of tert-butyl N-(2-{[4-(4-methyl-l,4-diazepan-l-yl)-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaen-9-yl]formamido}ethyl)carbamate (0.5 g, 907.98 pmol, 1 eq) in HCI/dioxane (4 M, 4.54 mL, 20 eq) was stirred at 25°C for 2 h. The mixture was concentrated in vacuum to give crude product, which was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H20(0.04% HCI)-MeCN]; gradient:5%-35% B over 8.0 min) to give the title compound (Example 1, 230 mg, 467.07 pmol, 51.44% yield, 98.90% purity, HCI) as yellow solid. LCMS (ESI+): m/z 452.3 (M+H) +, Rt: 1.235 min. XH NMR (400 MHz, DMSO-d6) 6 = 11.48 - 11.26 (m,
1H), 10.31 (br t, J = 5.8 Hz, 1H), 9.26 (d, J = 8.6 Hz, 2H), 8.10 - 8.01 (m, 3H), 7.70
- 7.47 (m, 2H), 4.65 (br dd, J = 4.6, 15.6 Hz, 1H), 4.32 (br dd, J = 3.3, 16.0 Hz, 1H), 4.18 - 3.96 (m, 2H), 3.90 - 3.78 (m, 1H), 3.63 (br s, 2H), 3.55 - 3.38 (m, 2H), 3.30 - 3.21 (m, 1H), 3.08 - 2.97 (m, 2H), 2.78 (d, J = 4.6 Hz, 3H), 2.48 - 2.41 (m, 1H), 2.38 - 2.20 (m, 1H).
Example 2: 4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl)- methyl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide
tert-Butyl 2-({[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}methyl )pyrrolidine- 1-carboxylate: To a solution of N-(2- aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide (0.1 g, 228.56 pmol, 1 eq) in DCM (1.00 mL) was added tert-butyl 2-(aminomethyl)- pyrrolidine-l-carboxylate (68.66 mg, 342.85 pmol, 1.5 eq). The mixture was cooled to -10°C , then DBU (104.39 mg, 685.69 pmol, 103.35 pL, 3 eq) and AICI3 (48.76 mg, 365.70 pmol, 19.98 pL, 1.6 eq) was added to the above mixture at -10°C. The mixture was stirred at -10 °C for 12 h. The mixture was poured into 50% NaOH solution (5 mL) very slowly under N2, then the mixture was filtered with diatomaceous earth. The aqueous phase was extracted with dichloromethane (10 mL*3) to give the title compound (0.1 g, 150.41 pmol, 65.81% yield, 89% purity) as yellow solid. LCMS (ESI+) : m/z 592.4 (M + H) +, Rt: 0.427 min.
4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl) methyl ]-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide: The solution of tert-butyl 2-({[4-(4-methyl-l,4-
diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaen-9-yl]formamido} methyl) pyrrolidine- 1-carboxylate (0.1 g, 152.10 pmol, 1 eq) in HCI/dioxane (4 M, 38.02 pL, 1 eq) was stirred at 25°C for 2 h. The mixture was concentrated in vacuum. The crude product was purified by prep- HPLC (column: Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)-MeCN];gradient: l%-25% B over 8.0 min) to give the title compound (Example 2, 52.0 mg, 102.28 pmol, 67.25% yield, 96.7% purity) as yellow solid. LCMS (ESI+): m/z 492.4(M + H) +, Rt: 1.301 min. XH NMR (400 MHz, DMSO-d6) 6 = 9.15 - 8.99 (m, 1H), 8.90 (br d, J = 8.5 Hz, 1H), 7.96 - 7.83 (m, 1H), 7.60 - 7.41 (m, 2H), 4.54 (br d, J = 14.1 Hz, 1H), 4.14 (br d, J = 13.5 Hz, 1H), 3.98 (br d, J = 5.6 Hz, 1H), 3.78 - 3.48 (m, 5H), 3.45 (br d, J = 11.6 Hz, 1H), 3.32 - 3.10 (m, 4H), 2.81 (s, 3H), 2.33 (br s, 1H), 2.22 (br s, 1H), 2.17 - 2.04 (m, 1H), 2.03 - 1.82 (m, 2H), 1.69 (br dd, J = 8.3, 12.5 Hz, 1H).
Example 3: 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(piperidin-2-yl)- methyl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide
tert-Butyl 2-({[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}methyl )piperidine- 1-carboxylate: To a solution of N-(2- aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide (150 mg, 342.85 pmol, 1 eq) in Dichloromethane (2 mL) was added tert-butyl 2-(aminomethyl)- piperidine-l-carboxylate (146.95 mg, 685.69 pmol, 19.59 pL, 2 eq), DBU (156.58 mg, 1.03 mmol, 155.03 pL, 3 eq) at -5°C. Then to the reaction was added AICI3 (73.14 mg, 548.55 pmol, 29.98 pL, 1.6 eq) slowly at -5°C. The reaction was warmed to 25°C and stirred for 2 h. LCMS showed ~60% of the desired MS. The reaction was quenched by addition of 50% of NaOH aqueous solution (1 mL) slowly. The reaction mixture was filtered. The filtrate was concentrated in vacuum to give a residue. The crude product was purified by prep-TLC (DCM: MeOH = 10: l, Rf =0.46) to give the title compound (120 mg, 198.10 pmol, 57.78% yield, 70% purity) as a white solid. LCMS: (Rt=0.685, M + H = 606.4).
4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(piperidin-2-yl) methyl ]-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide: The solution of tert-Butyl 2-({[4-(4-methyl-l,4- diazepan-l-yl)-8-oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2,4,6,9,12,14,16-heptaen-9-yl]formamido}methyl)piperidine-l-carboxylate (120 mg, 198.10 pmol, 1 eq) in HCI/dioxane (1 mL) was stirred at 25°C for 1 h. LCMS showed 81% of the desired MS. The mixture was concentrated in vacuum to give a residue. The crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H2O(0.1% TFA)-MeCN];gradient: l%-30% B over 10.0 min) to give the title compound (Example 3, 20.7 mg, 33.41 pmol, 16.86% yield, TFA) as a white solid. LCMS (Rt = 1.415 min, M + H = 506). XH NMR (400 MHz, DMSO+D2O-d6) 6 = 10.46 (t, J = 6.3 Hz, 1H), 9.42 - 9.20 (m, 2H), 8.14 - 8.05 (m,
1H), 7.73 - 7.63 (m, 1H), 7.62 - 7.48 (m, 1H), 4.75 - 4.28 (m, 1H), 4.14 - 3.90 (m,
3H), 3.73 - 3.53 (m, 3H), 3.44 (s, 3H), 3.26 (br d, J = 12.1 Hz, 3H), 2.98 - 2.80 (m,
3H), 2.47 - 2.32 (m, 1H), 2.29 - 2.17 (m, 1H), 1.94 - 1.85 (m, 1H), 1.84 - 1.70 (m,
2H), 1.65 - 1.39 (m, 3H).
Example 4: N-(2-hydroxyethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll- thia- 1,3, 5-triazatetracyclo[8.7.0.02,7.012,x 7 ]heptadeca-2, 4, 6, 9,12,14,16- heptaene-9-carboxamide
N-{2-[(tert-Butyldimethylsilyl)oxy]ethyl}-4-(4-methyl-l,4-diazepan-l-yl)-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-
2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide: To a mixture of N-(2-aminoethyl)-4- (4-methyl-l,4-diazepan-l-yl)-8-oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide (0.3 g, 685.69 pmol, 1 eq) and 2-[tert-butyl(dimethyl)silyl]oxyethanamine (240.46 mg, 1.37 mmol, 2 eq) in DCM (10.00 mL) was added DBU (313.17 mg, 2.06 mmol, 310.07 pL, 3 eq) and AICI3 (146.29 mg, 1.10 mmol, 59.95 pL, 1.6 eq) in portions at 0°C. Then the reaction was
stirred at 0°C for 2 h. LCMS showed the reaction was completed. The mixture was quenched with 50% of NaOH aqueous solution (5.00 mL) at 0°C for 10 min. Then the mixture was filtered and the filtrate was concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Ethyl acetate: Methanol = l/0, 1/5) to afford the title compound (0.25 g, 441.08 pmol, 64.33% yield) as yellow solid. 1H NMR (400 MHz, CDCI3) 6 = 10.46 (br s, 1H), 9.47 - 9.30 (m, 2H), 7.73 (br d, J = 7.5 Hz, 1H), 7.53 - 7.39 (m, 2H), 4.23 - 4.16 (m, 1H), 4.07 (br dd, J = 5.9, 8.4 Hz, 1H), 3.99 (t, J = 6.3 Hz, 1H), 3.83 (t, J = 5.9 Hz, 2H), 3.68 - 3.58 (m, 2H), 3.32 (br t, J = 5.5 Hz, 4H), 2.94 - 2.88 (m, 1H), 2.78 - 2.74 (m, 1H), 2.64 (td, J = 5.4, 10.5 Hz, 2H), 2.23 - 2.00 (m, 2H), 0.92 (s, 9H), 0.13 - 0.05 (m, 6H).
N-(2-hydroxyethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxamide: A mixture of N-{2-[(tert-butyldimethylsilyl)oxy]ethyl}-4-(4-methyl- l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2,4,6,9,12, 14, 16-heptaene-9-carboxamide (0.2 g, 352.87 pmol, 1 eq) in HCI/dioxane (4 M, 5.00 mL, 56.68 eq) was stirred at 25°C for 2 h. LCMS showed the reaction was completed. The mixture was filtered and the filtrate was concentrated in vacuum. The mixture was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H20(0.04% HCI)-MeCN];gradient: l%-30% B over 8.0 min) to give the title compound (Example 4, 40.3 mg, 89.06 pmol, 25.24% yield) as a yellow solid. LCMS (ESI+) : m/z 453.3 (M+H)+, Rt: 1.381 min. XH NMR (400 MHz, DMSO-d6+D2O) 6 = 10.95 - 10.74 (m, 1H), 10.29 (t, J = 5.4 Hz, 1H), 9.27 - 9.03 (m, 2H), 8.03 - 7.94 (m, 1H), 7.67 - 7.39 (m, 2H), 4.70 - 4.26 (m, 1H), 4.22 - 3.77 (m, 4H), 3.72 - 3.51 (m, 5H), 3.30 - 3.14 (m, 3H), 2.80 (d, J = 4.6 Hz, 3H), 2.43 - 2.16 (m, 2H).
Example 5: N-(3-aminopropyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll- thia- 1,3, 5-triazatetracyclo[8.7.0.02,7.012,x 7 ]heptadeca-2, 4, 6, 9,12,14,16- heptaene-9-carboxamide
- Ill -
tert-Butyl N-(3-{[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}propyl )carbamate: To a solution of N-(2-aminoethyl)-4-(4-methyl- l,4-diazepan-l-yl)-8-oxo-l 1-th ia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17] heptadeca- 2,4,6,9,12, 14, 16-heptaene-9-carboxamide (200 mg, 457.13 pmol, 1 eq) in dichloromethane (3 mL) was added tert-butyl N-(3-aminopropyl)carbamate (159.30 mg, 914.26 pmol, 159.62 pL, 2 eq) and DBU (208.77 mg, 1.37 mmol, 206.71 pL, 3 eq) at -5°C. Then to the reaction was added AICI3 (97.53 mg, 731.41 pmol, 39.97 pL, 1.6 eq) slowly at -5°C. The reaction was warmed to 10°C and stirred for 2 h. LCMS showed ~80% of the desired MS. The reaction was quenched by addition of 50% of NaOH aqueous solution (5 mL) slowly over 1 min under N2. The reaction mixture was filtered. The filter cake was triturated with 2-methoxy-2-methylpropane (20 mL) at 25°C for 20 min. After filtration, the filter cake was collected and dried to give the title compound (180 mg, 318.20 pmol, 69.61% yield) as a white solid. The crude product was used in the next step directly. LCMS: (Rt=0.381min,M + H = 566.3).
N-(3-aminopropyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxamide: The solution of tert-Butyl N-(3-{[4-(4-methyl-l,4-diazepan-l-yl)-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaen-9-yl]formamido}propyl)carbamate (180 mg, 318.20 pmol, 1 eq) in HCI/dioxane (6 mL) was stirred at 25°C for 1 h. LCMS showed 90% of the desired MS. The reaction was concentrated in vacuum to give a residue. The residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um;mobile phase: [H2O(0.1% TFA)-MeCN]; gradient: l%-35% B over 7.0 min) to give the title compound (Example 5, 65.7 mg, 141.12 pmol, 44.35% yield, TFA) as a yellow solid. LCMS: (Rt=1.348 min, M + H=466.2). XH NMR (400 MHz, DMSO-d6): 6 = 10.40 - 10.19 (m, 2H), 9.32 - 9.04 (m, 2H), 8.08 - 7.97 (m, 1H), 7.86 (br s, 2H), 7.66 - 7.47 (m, 2H),
4.68 - 4.23 (m, 1H), 4.16 - 3.82 (m, 3H), 3.74 - 3.55 (m, 1H), 3.49 - 3.40 (m, 3H), 3.29 (br s, 2H), 2.85 (s, 5H), 2.36 (br s, 1H), 2.23 (br s, 1H), 1.95 - 1.76 (m, 2H).
Example 6: 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-3-yl)- methyl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaene-9-carboxamide
tert-Butyl 3-({[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}methyl )pyrrolidine- 1-carboxylate: To a solution of N-(2- aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide (0.3 g, 685.69 pmol, 1 eq) in DCM (5 mL) was added tert-butyl 3-(aminomethyl)pyrrolidine- 1-carboxylate (274.66 mg, 1.37 mmol, 2 eq), DBU (313.17 mg, 2.06 mmol, 310.07 pL, 3 eq) and AICI3 (146.29 mg, 1.10 mmol, 59.95 pL, 1.6 eq) under N2 protection at -10°C. The mixture was stirred at -5°C for 2 h. LCMS showed R1 was consumed, 16.18% of Pl (Rt= 0.406, M + H= 592.6). The reaction mixture was quenched by addition of 50% of NaOH aqueous solution (2 mL) at 25°C, and then extracted with DCM (5 mL *3). The combined organic layers were washed with saturated brine (1 mL * 3), dried over Na2SC>4, filtered and concentrated under reduced pressure to give a residue. The crude product was triturated with methyl tert-butyl ether (5 mL) at 25°C for 5 min. After filtration, the filter cake was collected to give the title compound (0.2 g, 338.00 pmol, 49.29% yield) as yellow solid. LCMS (ESI+) : m/z 592.6 (M + H)+, Rt: 0.406 min.
4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-3-yl)methyl]-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide: The solution of tert-butyl 3-({[4-(4-methyl-l,4- diazepan-l-yl)-8-oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17] heptadeca-
2,4,6,9,12,14,16-heptaen-9-yl]formamido}methyl)pyrrolidine-l-carboxylate (0.2 g, 338.00 pmol, 1 eq) in HCI/dioxane (3 mL) was stirred at 25°C for 2 h. LCMS showed R1 was consumed, 26% of Pl (Rt= 0.278, M + H= 492.2) was generated. The reaction mixture was concentrated. The crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)-MeCN]; gradient: l%-25% B over 8.0 min) to give the title compound (Example 6, 81.5 mg, 165.78 pmol, 49.05% yield) as yellow solid. LCMS (ESI+) : m/z 492.3 (M + H)+, Rt: 1.311 min. XH NMR (400 MHz, DMSO-d6) 6 = 11.44 - 11.00 (m, 1H), 10.36 (br t, J = 5.8 Hz, 1H), 9.27 - 9.21 (m, 2H), 8.02 (dd, J = 3.3, 7.4 Hz, 1H), 7.76 - 7.42 (m, 2H), 4.72 - 4.26 (m, 1H), 4.23 - 3.76 (m, 4H), 3.73 - 3.37 (m, 5H), 3.31 - 3.09 (m, 5H),
2.97 - 2.85 (m, 1H), 2.79 (br d, J = 3.5 Hz, 3H), 2.62 - 2.52 (m, 2H), 2.41 - 2.16 (m, 1H), 2.12 - 1.99 (m, 1H), 1.76 - 1.62 (m, 1H).
The following examples were synthesised according to the method outlined in Synthetic Route 1 using commercially available starting materials:
Synthetic Route 2
Example 7: 4-(4-Methylpiperazin-l-yl)-8-oxo-N-[(piperidin-2-yl)methyl]-ll- thia- 1,3, 5-triazatetracyclo[8.7.0.02,7.012,x 7 ]heptadeca-2, 4, 6, 9,12,14,16- heptaene-9-carboxamide
Ethyl 4-(4-methylpiperazin-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8-oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (3 g, 8.34 mmol, 1 eq) in
MeCN (30 mL) was added 1-methylpiperazine (1.25 g, 12.51 mmol, 2.08 mL, 1.5 eq) and the mixture was stirred at 25°C for 2 h. LCMS showed 93% of desired MS, Rt =
0.323min, Ms+H = 424. The mixture was concentrated in vacuum to give crude product. The crude product was triturated with MeCN (20 mL) for 30 min. The mixture was filtered to give the filter cake. The filter cake was collected and dried to give the title compound (2.3 g, 5.43 mmol, 65.15% yield, 90% purity) as yellow solid. LCMS (ESI+): m/z 424.3 (M + H)+, Rt: 0.323 min.
tert-Butyl 2-({[4-(4-methylpiperazin-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}methyl )piperidine- 1-carboxylate: To a mixture of ethyl 4-(4- methylpiperazin-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxylate (0.3 g, 708.40 pmol, 1 eq) in DCM (10.00 mL) was added DBU (323.54 mg, 2.13 mmol, 320.34 pL, 3 eq) and AICI3 (151.13 mg, 1.13 mmol, 61.94 pL, 1.6 eq) in portion at 0°C. Then the reaction was stirred at 10°C for 2 h. LCMS showed the reaction was completed. The mixture was quenched with 50% of NaOH aqueous solution (3.00 mL) at 0°C for 10 min. Then the mixture was filtered and the filtrate was concentrated in vacuum. The crude product was triturated with MeOH (5.00 mL) at 0°C for 10 min, then the mixture was filtered and the solid was collected to give the title compound (0.25 g, 422.50 pmol, 59.64% yield) as a yellow solid. 1H NMR (400 MHz, CDCI3). 6 = 10.35 (br t, J = 5.4 Hz, 1H), 9.44 - 9.28 (m, 2H), 7.74 (d, J = 7.5 Hz, 1H), 7.59 - 7.37 (m, 2H), 4.53 (br s, 1H), 4.09 (br s, 4H), 3.83 - 3.70 (m, 1H), 3.67 - 3.58 (m, 1H), 3.54 - 3.35 (m, 1H), 3.03 - 2.86 (m, 1H), 2.60 (br s, 3H), 2.40 (s, 3H), 1.87 - 1.54 (m, 7H), 1.42 (s, 9H).
4-(4-Methylpiperazin-l-yl)-8-oxo-N-[(piperidin-2-yl)methyl]-ll-thia- 1,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxamide: A mixture of tert-butyl 2-({[4-(4-methylpiperazin-l-yl)-8-oxo-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}methyl)piperidine-l-carboxylate (0.2 g, 338.00 pmol, 1 eq) in
HCI/dioxane (4 M, 4.00 mL, 47.34 eq) was stirred at 25°C for 2 h. LCMS showed the reaction was completed. The mixture was filtered and the filtrate was concentrated in vacuum. The crude product was triturated with MeCN (5.00 mL) at 0°C for 10 min to give the title compound (Example 7, 120.3 mg, 244.71 pmol, 72.40% yield) as a yellow solid. LCMS (ESI+) : m/z 492.4 (M+H) +, Rt: 1.301 min XH NMR (400 MHz, DMSO-d6+D2O) 5 = 10.40 (br t, J = 5.9 Hz, 1H), 9.35 (s, 1H), 9.24 (br d, J = 8.5 Hz, 1H), 8.04 (br d, J = 7.6 Hz, 1H), 7.67 (br t, J = 7.8 Hz, 1H), 7.60 - 7.49 (m, 1H), 5.14 - 4.55 (m, 2H), 3.67 - 3.51 (m, 6H), 3.32 - 3.11 (m, 4H), 2.94 - 2.79 (m, 4H), 1.88 (br d, J = 8.4 Hz, 1H), 1.74 (br d, J = 18.4 Hz, 2H), 1.63 - 1.40 (m, 3H).
The following examples were synthesised according to the method outlined in Synthetic Route 2 using commercially available starting materials:
Example 8: 8-Oxo-4-(piperazin-l-yl)-N-[(piperidin-2-yl)methyl]-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16- heptaene-9-carboxamide
Ethyl 4-{4-[(tert-butoxy)carbonyl]piperazin-l-yl}-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxylate: To a solution of ethyl 4-chloro-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (2 g, 5.56 mmol, 1 eq) in MeCN (20 mL) was added tert-butyl piperazine-l-carboxylate (1.55 g, 8.34 mmol, 1.5 eq) and the mixture was stirred at 25°C for 2 h. LCMS showed that 91% of desired MS (Rt= 0.589min, M + H = 510) was detected. The mixture was concentrated in vacuum to give a residue. The crude product was triturated with MTBE (20 mL) for 30 min and after filtration the filter cake was collected to give the title compound (2 g, 3.53 mmol, 63.54% yield, 90% purity) as yellow solid. LCMS (ESI+): m/z 510.3 (M + H)+, Rt: 0.589 min.
tert-Butyl 4-{9-[({ l-[(tert-butoxy)carbonyl]piperidin-2-yl}methyl)- carbamoyl]-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9, 12,14,16-heptaen-4-yl}piperazine-l-carboxylate: To a solution of ethyl 4-{4-[(tert-butoxy)carbonyl]piperazin-l-yl}-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxylate (0.3 g, 588.72 pmol, 1 eq) in DCM (3 mL) was added tert-butyl 2- (aminomethyl)piperidine-l-carboxylate (189.25 mg, 883.09 pmol, 25.23 pL, 1.5 eq), the mixture was cool at -10°C,was added DBU (268.88 mg, 1.77 mmol, 266.21 pL, 3 eq) dropwise then AICI3 (125.60 mg, 941.96 pmol, 51.48 pL, 1.6 eq) was added in portions, the reaction was stirred for 4 h at 25°C. LCMS showed 85% of desired MS (Rt=0.711min, M + H = 678). The reaction was quenched by 50% of NaOH solution (2 mL) slowly and filtered. The mixture was extracted with Dichloromethane (3*5 mL).
The combined organic phases were dried over anhydrous Na2SC>4, concentrated in vacuum to give the title compound (0.2 g, 265.56 pmol, 45.11% yield, 90% purity) as yellow solid. The crude product was used for next step directly without purification. LCMS (ESI+) : m/z 678.5 (M + H)+, Rt: 0.713 min.
8-Oxo-4-(piperazin-l-yl)-N-[(piperidin-2-yl)methyl]-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxamide: The solution of tert-butyl 4-{9-[({l-[(tert-butoxy)carbonyl]piperidin- 2-yl}methyl)carbamoyl]-8-oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9,12,14,16-heptaen-4-yl}piperazine-l-carboxylate (0.2 g, 295.07 pmol, 1 eq) in HCI/dioxane (5 mL) was stirred for 1 h at 25°C. LCMS showed 90% of desired MS, Rt= 0.280min, M + H=478. The reaction was concentrated in vacuum to give a residue. The crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H20(0.04% HCI)-MeCN];gradient: 1%- 30% B over 8.0 min) to give the title compound (Example 8, 0.12 g, 228.75 pmol, 77.53% yield, 97.99% purity, HCI) as yellow solid. LCMS of product (ESI+) : m/z 478.3 (M + H) +, Rt: 1.709 min. XH NMR (400 MHz, DMSO-d6) 6 = 10.37 (br t, J = 6.1 Hz, 1H), 9.29 (s, 1H), 9.19 (d, J = 8.5 Hz, 1H), 8.00 (d, J = 7.4 Hz, 1H), 7.68 - 7.60 (m, 1H), 7.57 - 7.50 (m, 1H), 4.18 (br s, 4H), 3.65 - 3.52 (m, 2H), 3.43 - 3.16 (m, 6H), 2.90 - 2.77 (m, 1H), 1.93 - 1.69 (m, 3H), 1.64 - 1.39 (m, 3H).
The following examples were synthesised according to the method outlined in Synthetic Route 3 using commercially available starting materials:
Synthetic Route 4
Example 9: 9-(3-aminopyrrolidine-l-carbonyl)-4-(4-methyl-l,4-diazepan-l- yl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2, 4, 6, 9, 12, 14,16-heptaen-8-one
tert-Butyl N-{ l-[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carbonyl] pyrrolidin-3-yl}carbamate: To a solution of N-(2-aminoethyl)-4-(4- methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide (0.1 g, 228.56 pmol, 1 eq) in DCM (2 mL) was added tert-butyl N-pyrrolidin-3-yl carbamate (85.14 mg, 457.13 pmol, 2 eq), DBU (104.39 mg, 685.69 pmol, 103.36 pL, 3 eq) and AICI3 (48.76 mg, 365.70 pmol, 19.98 pL, 1.6 eq) under N2 protection at -5°C. The mixture was stirred for 2 h at 10°C. The reaction mixture was quenched by addition of 50% NaOH (aq) 1 mL at 25°C, and then extracted with DCM (2 mL*3). The combined organic layers were washed with saturated brine (3 mL*3), dried over Na2SC>4, filtered and concentrated under reduced pressure to give the title compound (0.1 g, 173.10 pmol, 75.73% yield) as yellow solid, which was used in the next step directly without purification. LCMS (ESI+): m/z 578.5 (M + H) +, Rt: 0.326 min.
9-(3-aminopyrrolidine-l-carbonyl)-4-(4-methyl-l,4-diazepan-l-yl)-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen- 8-one: The mixture of tert-butyl N-{ l-[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll- thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carbonyl]pyrrolidin-3-yl}carbamate (0.1 g, 173.10 pmol, 1 eq) in HCI/dioxane (1 mL) was stirred at 25°C for 2 h. The reaction mixture was concentrated in vacuum. The crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H20(0.04% HCI)-MeCN]; gradient: l%-25% B over 8.0 min) to give the title compound (Example 9, 44.5 mg, 93.18 pmol, 53.83% yield) as an off-yellow solid. LCMS (ESI+) : m/z 478.4 (M + H)+, Rt: 0.231 min. XH NMR (400 MHz, DMSO-de) 5 = 11.17 - 10.92 (m, 1H), 9.32 - 9.05 (m, 2H), 8.32 (br s, 2H), 8.07 - 7.92 (m, 1H), 7.71 - 7.56 (m, 1H), 7.50 (q, J = 6.8 Hz, 1H), 4.72 - 4.29 (m, 1H), 4.27 - 4.06 (m, 1H), 3.96 - 3.82 (m, 2H), 3.74 (br d, J = 8.4 Hz, 2H), 3.66 - 3.47 (m, 4H), 3.25 (br d, J = 3.8 Hz, 3H), 2.78 (br d, J = 3.6 Hz, 3H), 2.27 (br s, 3H), 2.09 - 1.86 (m, 1H).
The following examples were synthesised according to the method outlined in Synthetic Route 4 using commercially available starting materials:
Synthetic Route 5
Example 16: 9-(3-Aminopyrrolidine-l-carbonyl)-4-(piperazin-l-yl)-ll-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16- heptaen-8-one
tert-Butyl 4-[9-(3-{[(tert-butoxy)carbonyl]amino}pyrrolidine-l-carbonyl)-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-
2(7), 3, 5, 9, 12, 14, 16-heptaen-4-yl] piperazine- 1-carboxylate: To a mixture of ethyl 4-{4-[(tert-butoxy)carbonyl]piperazin-l-yl}-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxylate (0.3 g, 588.72 pmol, 1 eq) and tert-butyl N-pyrrolidin-3-ylcarbamate (219.30 mg, 1.18 mmol, 2 eq) in DCM (10 mL) was added DBU (268.88 mg, 1.77 mmol, 266.22 pL, 3 eq) and AICI3 (125.60 mg, 941.96 pmol, 51.48 pL, 1.6 eq) in portions at -5°C. Then the reaction was warmed to 10°C and stirred for 2 h. LCMS
showed the reaction was completed. The mixture was quenched with 50% of NaOH (aq) (3 mL) at 0°C for 10 min. Then the mixture was filtered and the filtrate was concentrated in vacuum. The crude product was triturated with MeOH (5 mL) at 0°C for 10 min to give the title compound (0.15 g, 230.85 pmol, 39.21% yield) as a yellow solid. LCMS (ESI+): Rt: 0.568 min, m/z 650.3 (M + H)+.
9-(3-Aminopyrrolidine-l-carbonyl)-4-(piperazin-l-yl)-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaen-8- one: A mixture of tert-butyl 4-[9-(3-{[(tert-butoxy)carbonyl]amino}pyrrolidine-l- ca rbonyl) -8-oxo- 11-th ia-1, 3, 5-triazatetracyclo [8.7.0.02,7.012,17] heptadeca - 2(7),3,5,9,12,14,16-heptaen-4-yl]piperazine-l-carboxylate (0.15 g, 230.85 pmol, 1 eq) in HCI/dioxane (4 M, 5 mL, 86.63 eq) was stirred at 25°C for 2 h. LCMS showed the reaction was completed. The mixture was filtered and the filtrate was concentrated in vacuum. The residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um;mobile phase: [H20(0.04% HCI)-MeCN]; gradient: 1%-15% B over 8.0 min) to give the title compound (Example 16, 22.3 mg, 49.61 pmol, 21.49% yield) as a yellow solid. LCMS (ESI+): m/z 450.2 (M + H) +, Rt: 1.078 min 1H NMR (400 MHz, DMSO-de) 6 = 9.28 - 9.15 (m, 2H), 7.99 (br dd, J = 4.3, 6.8 Hz, 1H), 7.63 (br t, J = 7.9 Hz, 1H), 7.54 - 7.48 (m, 1H), 4.18 (br s, 4H), 3.91 - 3.83 (m, 1H), 3.77
- 3.68 (m, 1H), 3.63 - 3.53 (m, 2H), 3.31 (br s, 4H), 3.17 (br d, J = 7.5 Hz, 1H), 2.31
- 2.09 (m, 1H), 2.05 - 1.84 (m, 1H).
Synthetic Route 6
Example 17: 9-(3-Aminopyrrolidine-l-carbonyl)-4-[3-(dimethylamino)- pyrrolidin-l-yl]-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaen-8-one
Ethyl 4-[3-(dimethylamino)pyrrolidin-l-yl]-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene- 9-carboxylate: To the solution of ethyl 4-chloro-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (0.5 g, 1.39 mmol, 1 eq) in MeCN (5 mL) was added N,N-dimethylpyrrolidin-3-amine (317.38 mg, 2.78 mmol, 2 eq). The mixture was stirred at 25°C for 2 h. The reaction mixture was concentrated. The crude product was triturated with methyl tert-butyl ether (30 mL) for 30 min. After being filtered, the filter cake was collected and dried to give the title compound (400 mg, 914.26 pmol, 65.79% yield) as a white solid. The crude product was used for next step directly. LCMS (ESI+): m/z 438.1 (M + H)+, Rt: 0.339 mm.
tert-Butyl N-(l-{4-[3-(dimethylamino)pyrrolidin-l-yl]-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene- 9-carbonyl}pyrrolidin-3-yl)carbamate: To a solution of ethyl 4-[3- (dimethylamino)pyrrolidin-l-yl]-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (350 mg, 799.97 pmol, 1 eq) and tert-butyl N-pyrrolidin-3-ylcarbamate (297.99 mg, 1.60 mmol, 2 eq) in DCM (5 mL) was added DBU (365.36 mg, 2.40 mmol, 361.74 pL, 3 eq) and AICI3 (213.34 mg, 1.60 mmol, 87.43 pL, 2 eq) at -5°C. The mixture was warmed to 10°C and stirred for 2 h. The reaction mixture was quenched by NaOH (50%, 5 mL) at 25°C and filtered. The filtrate mixture was extracted with ethyl acetate 30 mL (10 mL * 3). The combined organic layers were washed with saturated brine (30 mL), dried over NaSCk, filtered and concentrated under reduced pressure to give the title compound (100 mg, 173.10 pmol, 21.64% yield) as a white solid. LCMS (ESI+): m/z 578.6 (M + H)+, Rt: 0.346 min.
9-(3-Ami nopyrrolidine- l-carbonyl)-4-[ 3- (dimethylamino)pyrrolidin- 1-yl]- 11- thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-
heptaen-8-one: The solution of tert-butyl N-(l-{4-[3-(dimethylamino)pyrrolidin-l- yl]-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2(7),3,5,9,12,14,16-heptaene-9-carbonyl}pyrrolidin-3-yl)carbamate (100 mg, 173.10 pmol, 1 eq) in HCI/dioxane (3 mL) was stirred at 25 °C for 2 h. The reaction was concentrated in vacuum. The residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)-MeCN]; gradient: l%-25% B over 8.0 min) to give the title compound (Example 17, 25 mg, 52.35 pmol, 30.24% yield) as a yellow solid. LCMS (ESI+) : m/z 478.3 (M + H) +, Rt: 1.142 min. XH NMR (400 MHz, DMSO-d6) 5 = 11.57 - 11.19 (m, 1H), 9.35 (br d, J = 8.3 Hz, 1H), 9.28 - 9.17 (m, 1H), 8.39 - 8.13 (m, 3H), 7.98 (t, J = 7.0 Hz, 1H), 7.70 -
7.55 (m, 1H), 7.53 - 7.45 (m, 1H), 4.26 - 4.17 (m, 1H), 4.13 - 3.95 (m, 2H), 3.91 -
3.84 (m, 1H), 3.82 - 3.68 (m, 3H), 3.66 - 3.53 (m, 3H), 2.95 - 2.75 (m, 6H), 2.53 (br d, J = 5.9 Hz, 1H), 2.47 (br s, 1H), 2.31 - 2.11 (m, 1H), 2.06 - 1.86 (m, 1H). The following examples were synthesised according to the method outlined in Synthetic Route 6 using commercially available starting materials:
Synthetic Route 7
Example 20: 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl)- methyl]-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaene-9-carboxamide
Ethyl 4-chloro-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9, 12, 14, 16-heptaene-9-carboxylate: To a solution of ethyl 2-(lH-benzimidazol-2-yl) acetate (1.56 g, 7.69 mmol, 1 eq) in THF (15 mL) was added MgC (1.09 g, 11.54 mmol, 470.32 pL, 1.5 eq) at 25°C. Then to the mixture was added a solution of 2,4-dichloropyrimidine-5-carbonyl chloride (2.1 g, 10.0 mmol, 1.3 eq) in THF (10 mL) dropwise at -20°C. Then to the mixture was added DIEA (3.96 g, 80.58 mmol, 5.32 mL, 4 eq) at -20°C. The mixture was stirred at 25°C for 2 h. LCMS showed the starting materials to be consumed and 60% of product generated. The mixture was concentrated in vacuum. The crude product was triturated with water (50 mL) for 30 min. After filtered, the filter cake was triturated with MeCN (50 mL *2) for 30 min. After filtration, the filter cake was collected to give the title compound (3.5 g, 6.13 mmol, 93.56% yield, 60% purity) as yellow solid. LCMS (ESI+) : m/z 342.9 (M + H)+, Rt: 0.419 min.
Ethyl 4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-l,3,5,ll-tetraazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (1.5 g, 4.38 mmol, 1 eq) in MeCN (20 mL) was added l-methyl-l,4-diazepane (999.50 mg, 8.75 mmol, 1.09 mL, 2 eq) and DIEA (1.70 g, 13.13 mmol, 2.29 mL, 3 eq). The mixture was stirred at 25°C for 2 h. LCMS showed the starting material to be consumed and 40% of product was generated. The mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um;mobile phase: [H20(0.04% HCI)-MeCN];gradient: l%-35% B over 10.0 min) to give the title compound (1.2 g, 2.86 mmol, 65.21% yield, 90% purity) as yellow solid. LCMS (ESI+): m/z 421.3 (M + H)+, Rt: 1.393 min.
tert-Butyl 2-({[4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-l,3,5,ll- tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaen-9- yl]formamido}methyl )pyrrolidine- 1-carboxylate: To a solution of ethyl 4-(4- methyl-l,4-diazepan-l-yl)-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (300 mg, 713.50 pmol, 1 eq) in DMF (5 mL) was added tert-butyl 2-(aminomethyl)pyrrolidine-l-carboxylate (285.79 mg, 1.43 mmol, 2 eq) and DBU (325.86 mg, 2.14 mmol, 322.63 pL, 3 eq). The mixture was stirred at 100°C for 12 h. The reaction was poured into water (50 mL). The mixture was extracted with ethyl acetate (3*5 mL). The combined organic phases were washed with saturated brine (50 mL), dried over anhydrous Na2SC>4, concentrated in vacuum to give the title compound (300 mg, 469.83 pmol, 65.85% yield, 90% purity) as yellow solid, which was used in the next step directly without purification. LCMS (ESI+): m/z 575.3 (M + H)+, Rt: 0.386 min.
HCI/dioxane
25°C, 2 h
4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl)methyl]-l,3,5,ll- tetraazatetracyclo [8.7.0.02,7.012,x 7 ] heptadeca- 2(7), 3, 5, 9,12,14,16- heptaene-9-carboxamide: A solution of tert-butyl 2-({[4-(4-methyl-l,4-diazepan- l-yl)-8-oxo-l,3,5,l l-tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2,4,6,9,12,14,16-heptaen-9-yl]formamido}methyl)pyrrolidine-l-carboxylate (300 mg, 522.04 pmol, 1 eq) in HCI/dioxane (5 mL) was stirred at 25°C for 2 h. The mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H2O (0.04% HCI)-MeCN]; gradient: l%-25% B over 8.0 min) to give the title compound (Example 20, 121.2 mg, 255.40 pmol, 48.92% yield) as yellow solid. LCMS (ESI+) : m/z 475.4 (M + H) +, Rt: 1.273 min. XH NMR (400 MHz, DMSO-d6) 5 = 12.97 (br s, 1H), 11.27 - 11.02 (m, 1H), 10.53 (br t, J = 5.3 Hz, 1H), 9.58 (br d, J = 1.5 Hz, 1H), 9.17 (dd, J = 1.7, 9.4 Hz, 1H), 9.00 (br s, 1H), 8.67 - 8.48 (m, 1H), 7.79 (d, J = 7.9 Hz, 1H), 7.53 - 7.36 (m, 2H), 4.70 - 4.36 (m, 1H), 4.21 - 3.86 (m, 3H), 3.85 - 3.59 (m, 5H), 3.29 - 3.12 (m, 4H), 2.78 (br d, J = 2.8 Hz, 3H), 2.37 - 2.17 (m, 1H), 2.14 - 2.02 (m, 1H), 2.02 - 1.83 (m, 2H), 1.80 - 1.67 (m, 1H).
The following examples were synthesised according to the method outlined in Synthetic Route 7 using commercially available starting materials:
Synthetic Route 8
Example 23: 8-Oxo-4-(piperazin- 1-yl )-N-[(pyrrolidin-2-yl) methyl]- 1,3,5, 11- tetraazatetracyclo [8.7.0.02,7.012,x 7 ] heptadeca- 2(7), 3, 5, 9,12,14,16- heptaene-9-carboxamide
Ethyl 4-{4-[(tert-butoxy)carbonyl]piperazin-l-yl}-8-oxo-l,3,5,ll- tetraazatetracyclo [8.7.0.02,7.012,x 7 ] heptadeca- 2(7), 3, 5, 9,12,14,16- heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8-oxo-l,3,5,l l- tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9- carboxylate (3 g, 8.77 mmol, 1 eq} in MeCN (40 mL) was added tert-butyl piperazine- 1-carboxylate (3.26 g, 17.54 mmol, 2 eq}. The mixture was stirred at 80°C for 12 hr. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (column : Phenomenex luna C18 (250*70mm, 15 um); mobile phase: [H20(0.04%
HCI)-MeCN]; gradient: 40%-80% B over 18.0 min) to give the title compound (800 mg, 1.62 mmol, 13.92% yield) as yellow solid. LCMS (ESI+): m/z 493.2 (M + H)+, Rt: 0.488 min.
tert-Butyl 4-{9-[({ l-[(tert-butoxy)carbonyl]pyrrolidin-2-yl}methyl)- carbamoyl]-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaen-4-yl}piperazine- 1-carboxylate: To a solution of ethyl 4-{4-[(tert-butoxy)carbony I] piperazin -l-yl}-8-oxo-l, 3,5, 11-tetraazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (500 mg, 1.02 mmol, 1 eq) in DMF (5 mL) was added DBU (463.65 mg, 3.06 mmol, 459.05 pL, 3 eq) and tert-butyl 2-(aminomethyl)pyrrolidine-l-carboxylate (406.65 mg, 2.04 pmol, 2 eq). The mixture was stirred at 100°C for 12 hr. LCMS showed R1 was consumed and 60% of Pl was generated. The reaction was poured into ice-water (w/w = 1/1) (50 mL). The mixture was filtered to give the filter cake. The filter cake was collected and dried to give the title compound crude which was used in the next step directly without purification (200 mg, 309.44 pmol, 30.46% yield) as yellow solid. LCMS (ESI+): m/z 647.4 (M + H)+, Rt: 0.667 min.
8-Oxo-4-(pi perazin- 1-yl)- N-[ (pyrrol idin-2-yl)methyl]- 1,3, 5,11- tetraazatetracyclo[8.7.0.02,7.012,x 7 ] heptadeca- 2(7), 3, 5, 9,12,14,16- heptaene-9-carboxamide: A solution of tert-butyl 4-{9-[({l-[(tert-butoxy)- carbonyl]pyrrolidin-2-yl}methyl)carbamoyl]-8-oxo-l,3,5,ll-tetraazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaen-4-yl}piperazine-l- carboxylate (200 mg, 309.25 pmol, 1 eq) in HCI/dioxane (3 mL) was stirred at 25°C for 2 hr. The mixture was filtered to give the filter cake. The filter cake was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H2O (0.04% HCI)-MeCN]; gradient: l%-30% B over 8.0 min) to give the title compound (Example 23, 165.4 mg, 370.67 pmol, 94.44% yield) as brown solid. LCMS (ESI+):
m/z 447.1 (M + H)+, Rt: 0.271 min. XH NMR (400 MHz, DMSO-d6) 6 = 12.87 (br s, 1H), 10.56 - 10.34 (m, 1H), 9.89 - 9.61 (m, 3H), 9.16 (br d, J = 4.3 Hz, 1H), 9.10 (s, 1H), 8.48 (br d, J = 8.0 Hz, 1H), 7.72 (d, J = 7.9 Hz, 1H), 7.48 - 7.41 (m, 1H), 7.39 - 7.32 (m, 1H), 4.17 (br s, 4H), 3.76 (td, J = 6.3, 12.9 Hz, 1H), 3.72 - 3.59 (m, 2H), 3.29 (br s, 3H), 3.27 - 3.14 (m, 3H), 2.14 - 2.03 (m, 1H), 2.03 - 1.93 (m, 1H), 1.93 -
1.83 (m, 1H), 1.80 - 1.68 (m, 1H).
The following examples were synthesised according to the method outlined in Synthetic Route 8 using commercially available starting materials:
Synthetic Route 9 Example 24: ll-methyl-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin- 2-yl)methyl]-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaene-9-carboxamide
Ethyl 4-chloro-ll-methyl-8-oxo-l,3,5,ll-tetraazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate(3.0 g, 8.77 mmol, 1 eq) in DMF (30 mL) was added DIEA (3.4 g, 26.31 mmol, 4.58 mL, 3 eq). Then the mixture was cooled to 0°C and CH3I (1.86 g, 13.16 mmol, 817.8 pL, 1.5 eq) was added. The mixture was stirred at 80°C for 12 h. LCMS showed all of the starting material was consumed and 40% of product was generated. The reaction was quenched by addition of 150 mL of water and stirred for 20 min. Solid was precipitated out. The mixture was filtered to give the filter cake. The filter cake was collected and dried to give the title compound (3.0 g, 8.43 mmol, 96.15% yield, 60% purity) as yellow solid. The crude product was used for next step directly without further purification. LCMS (ESI+): m/z 357.0 (M + H)+, Rt: 0.444 min.
Ethyl 1 l-methyl-4-(4-methy 1-1, 4-diazepan- l-yl)-8-oxo- 1,3, 5,11- tetraazatetracyclo[8.7.0.02,7.012,x 7 ] heptadeca- 2(7), 3, 5, 9,12,14,16- heptaene-9-carboxylate: To a solution of ethyl 4-chloro-ll-methyl-8-oxo-l,3,5,ll- tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9- carboxylate (3.4 g, 9.53 mmol, 1 eq) in MeCN (35 mL) was added l-methyl-1,4- diazepane (2.18 g, 19.06 mmol, 2.37 mL, 2 eq) and DIEA (3.70 g, 28.59 mmol, 4.98 mL, 3 eq). The mixture was stirred at 25°C for 12 h. LCMS showed material was consumed and 30% of product was generated. The mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column : Phenomenex luna C18 (250*70mm, 15 um); mobile phase: [H2O (0.04%HCI)-MeCN]; gradient: 20%-50% B over 18.0 min) to give the title (600 mg, 1.38 mmol, 14.49% yield) as yellow solid. LCMS (ESI+): m/z 435.2 (M + H)+, Rt: 0.323 min.
{l-[(tert-Butoxy)carbonyl]pyrrolidin-2-yl}methyl ll-methyl-4-(4-methyl- l,4-diazepan-l-yl)-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9, 12, 14, 16-heptaene-9-carboxylate: To a solution of ethyl ll-methyl-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo- 1,3,5, 11-tetraazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (300 mg, 690.46 pmol, 1 eq) in DCM (2 mL) was added tert-butyl 2-(aminomethyl)pyrrolidine- 1-carboxylate (276.57 mg, 1.38 mmol, 2 eq), DBU (315.35 mg, 2.07 mmol, 312.23 pL, 3 eq) and AICI3 (138.10 mg, 1.04 mmol, 56.60 pL, 1.5 eq) at -5°C. Then the mixture was stirred at 25°C for 2 h. LCMS showed material was consumed and 40% of product was generated. The reaction was quenched by addition of 10 mL of 50% of NaOH (aq) under N2. The aqueous phase was extracted with DCM (2 mL*3). The combined organic phases were washed with saturated brine (30 mL), dried over anhydrous Na2SC>4, concentrated in vacuum to give the title compound (120 mg, 203.84 pmol, 29.52% yield). The crude product was used in the next step directly without further purification. LCMS (ESI+): m/z 589.3 (M + H)+, Rt: 0.373 min.
ll-methyl-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2- yl)methyl]-l,3,5,ll-tetraazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2(7), 3, 5, 9, 12, 14, 16-heptaene-9-carboxamide : A solution of {l-[(tert-butoxy)- carbonyl] pyrrol id in -2-yl} methyl ll-methyl-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo- 1, 3, 5, 11 -tetraazatetra cyclo[8.7.0.02,7.012,17] heptadeca -2(7), 3, 5, 9, 12, 14, 16- heptaene-9-carboxylate (120 mg, 203.97 pmol, 1 eq) in HCI/dioxane (2 mL) was stirred at 25°C for 2 h. LCMS showed material was consumed and 60% of product was generated. The mixture was concentrated in vacuum. The residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 um; mobile phase: [H2O (0.04% HCI)-MeCN];gradient: l%-30% B over 7.0 min) to give the title compound (Example 24, 86.4 mg, 176.84 pmol, 69.40% yield) as yellow solid. LCMS (ESI+): m/z 489.4 (M + H)+, Rt: 1.226 min. XH NMR (400 MHz, DMSO-d6) 6 = 11.27 (br d, J = 2.5 Hz, 1H), 9.71 (br d, J = 1.6 Hz, 1H), 9.38 (br s, 1H), 9.17 - 9.01 (m, 2H), 8.69 -
8.46 (m, 1H), 7.64 (d, J = 7.9 Hz, 1H), 7.55 - 7.37 (m, 2H), 4.63 - 4.35 (m, 1H),
4.11 - 3.99 (m, 1H), 3.95 - 3.73 (m, 3H), 3.70 - 3.58 (m, 5H), 3.56 - 3.34 (m, 2H), 3.30 - 3.09 (m, 4H), 2.78 (br s, 3H), 2.49 - 2.40 (m, 1H), 2.39 - 2.16 (m, 1H), 2.15 - 2.05 (m, 1H), 2.05 - 1.94 (m, 1H), 1.94 - 1.83 (m, 1H), 1.83 - 1.68 (m, 1H).
The following examples were synthesised according to the method outlined in Synthetic Route 9 using commercially available starting materials:
Synthetic Route 10
Example 25: 4-(4-Methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene- 9-carbohydrazide
To a solution of ethyl 4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012, 17] heptadeca -2(7), 3, 5, 9, 12, 14,16-heptaene-9- carboxylate (5 g, 11.43 mmol, 1 eq) in EtOH (50 mL) was added hydrazine (732.45 mg, 22.86 mmol, 2 eq) at 0 °C under N2. The reaction was heated to 50 °C and stirred for 2 h. The mixture was quenched by H2O (50 mL) at 0 °C before being extracted with dichloromethane (50 mL x 3). The combined organics were washed with saturated brine solution (50 mL x 2), dried over anhydrous sodium sulfate and concentrated in vacuum to give the title compound (2.8 g, 6.61 mmol, 57.85% yield) as a yellow solid. LCMS (ESI+) : m/z 424.2 (M + H)+, Rt: 0.275 min.
Synthetic Route 11
Example 26: 2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N- (pyrrolidin-2-ylmethyl)-5H-benzo[4,,5,]thiazolo[3,,2' : 1,6] pyrido[ 2,3-d]- pyrimidine-6-carboxamide
Ethyl 4-{5-methyl-octahydropyrrolo[3,4-c]pyrrol-2-yl}-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene- 9-carboxylate: To a mixture of ethyl 4-chloro-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (2 g, 5.56 mmol, 1 eq) in MeCN (20 mL) was added 5-methyl-2,3,3a,4,6,6a-hexahydro-lH- pyrrolo[3,4-c] pyrrole (1.40 g, 11.12 mmol, 2 eq) and DIEA (2.16 g, 16.68 mmol, 2.90 mL, 3 eq). The mixture was stirred at 25°C for 2 h and then concentrated in vacuo. The mixture was triturated with MeCN (20 mL) for 5 min. After filtration, the filter cake was triturated with methyl tert-butyl ether (20 mL) for 5 min before the filter cake was collected to give the title compound (2 g, 4.00 mmol, 72.03% yield, 90% purity) as a yellow solid. LCMS (ESI+) : Rt: 0.356 min, m/z 450.2 (M + H)+.
Tert-butyl 2-((2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo- 5H-benzo[4',5,]thiazolo[3,,2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxamido)- methyl)pyrrolidine- 1-carboxylate : To a solution of ethyl 4-{5-methyl- octahydropyrrolo[3,4-c]pyrrol-2-yl}-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (0.3 g, 667.37 pmol, 1 eq} in DCM (3 mL) was added tert-butyl 2-(aminomethyl)pyrrolidine- 1-carboxylate (267.32 mg, 1.33 mmol, 2 eq}. DBU (304.79 mg, 2.00 mmol, 301.78 pL, 3 eq} was added dropwise at -10°C and the mixture was stirred for 20 min. AICI3 (142.38 mg, 1.07 mmol, 58.35 pL, 1.6 eq} was added in portions and the reaction mixture was stirred at 25°C for 2 h. The reaction was quenched by 2M NaOH (sat aq, 1 mL) and extracted with dichloromethane (3 x 2 mL). The combined organic phases were washed with saturated brine (3 mL), dried over anhydrous Na2SO4 and concentrated in vacuo to give a residue. The crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)- ACN];gradient:20%-55% B over 8.0 min) to give the title compound (0.2 g, 298.14 pmol, 44.67% yield, 90% purity) as a yellow solid. LCMS (ESI+): Rt: 0.429 min, m/z 604.4 (M + H)+.
2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N-(pyrrolidin-2- ylmethyl )-5H-benzo[4',5,]thiazolo[3,,2' : 1,6] pyrido[2,3-d] pyrimidine-6- carboxamide: A mixture of tert-butyl 2-((2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo[3',2': l,6]pyrido[2,3-d]pyrimidine-6- carboxamido) methyl)pyrrolidine-l-carboxylate (0.2 g, 414.09 pmol, 1 eq} in HCI/dioxane (5 mL) was stirred at 25°C for 2 h. The mixture was concentrated in vacuo to give a residue which was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)-CAN];gradient: l%-30% B over 8.0 min) to give the title compound (Example 26, 0.05 g, 89.80 pmol, 21.69% yield, 97% purity, HCI salt) as a yellow solid. LCMS (ESI+): Rt: 1.321 min, m/z 504.2 (M + H)+. XH NMR (400 MHz, DMSO-d6 + D2O) 6 = 9.07 (br s, 2H), 7.87 (br d, J = 6.3
Hz, 1H), 7.48 (br s, 2H), 3.95 - 3.73 (m, 4H), 3.73 - 3.51 (m, 5H), 3.48 - 3.29 (m, 2H), 3.29 - 3.12 (m, 3H), 3.10 - 2.95 (m, 1H), 2.84 (br d, J = 12.8 Hz, 3H), 2.10 (br d, J = 6.9 Hz, 1H), 2.01 - 1.83 (m, 2H), 1.76 - 1.59 (m, 1H).
Example 26 was separated into isomer 1 (Example 26A) and isomer 2 (Example 26B) :
Example 26A: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5- yl)-8-oxo-N-[[(2S)-pyrrolidin-2-yl]methyl]-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12( 17),13,15-heptaene-9- carboxamide
Yield: 29%
LCMS (ESI+) : m/z 504.3 (M+H)+, Rt: 1.926 min. XH NMR (400 MHz, DMSO- d6+D2O) 6 = 9.49 - 8.75 (m, 2H), 7.89 (br d, J = 6.8 Hz, 1H), 7.48 (br d, J = 6.6 Hz, 2H), 3.93 - 3.92 (m, 1H), 3.92 - 3.72 (m, 4H), 3.70 - 3.51 (m, 4H), 3.47 - 3.32 (m, 2H), 3.28 - 3.13 (m, 3H), 3.10 - 2.97 (m, 1H), 2.85 (br d, J = 13.1 Hz, 3H), 2.10 (br d, J = 6.0 Hz, 1H), 2.02 - 1.86 (m, 2H), 1.75 - 1.62 (m, 1H).
Example 26B: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5- yl)-8-oxo-N-[[(2R)-pyrrolidin-2-yl]methyl]-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12( 17),13,15-heptaene-9- carboxamide
Yield: 38%
LCMS (ESI+) : m/z 504.3 (M+H)+, Rt: 2.014 min. 1H NMR (400 MHz, DMSO- d6+D2O) 6 = 8.75 (br s, 1H), 8.61 (br s, 1H), 7.65 (br d, J = 6.6 Hz, 1H), 7.43 - 7.22 (m, 2H), 3.90 (br s, 1H), 3.84 - 3.73 (m, 1H), 3.71 - 3.54 (m, 4H), 3.53 - 3.40 (m, 4H), 3.36 (br dd, J = 2.4, 4.4 Hz, 1H), 3.22 (br s, 3H), 2.99 (br s, 1H), 2.92 - 2.78 (m, 3H), 2.19 - 2.07 (m, 1H), 2.04 - 1.86 (m, 2H), 1.75 - 1.62 (m, 1H).
The following examples 27-31 were synthesised according to the method outlined in
Synthetic Route 11 using commercially available starting materials:
Example 27: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidylmethyl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 45%
LCMS (ESI+): m/z 518.3 (M+H)+, Rt: 1.933 min. XH NMR (400 MHz, DMSO-d6 + D2O) 5 = 9.39 (dd, J = 4.3, 8.2 Hz, 1H), 9.26 (s, 1H), 8.01 (d, J = 7.6 Hz, 1H), 7.65 - 7.58 (m, 1H), 7.57 - 7.49 (m, 1H), 4.10 - 3.97 (m, 1H), 3.96 - 3.87 (m, 2H), 3.96 - 3.77 (m, 2H), 3.74 - 3.68 (m, 1H), 3.49 - 3.41 (m, 1H), 3.38 (br d, J = 8.0 Hz, 1H), 3.34 - 3.21 (m, 5H), 3.14 - 2.98 (m, 1H), 2.94 - 2.79 (m, 5H), 1.85 (br d, J = 11.6 Hz, 3H), 1.48 - 1.33 (m, 2H).
Example 28: N-(2-aminoethyl)-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo- [3,4-c]pyrrol-5-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 30%
LCMS (ESI+) : m/z 464.3 (M + H)+, Rt: 1.766 min. XH NMR (400 MHz, DMSO-d6 + D2O) 6 = 9.21 - 9.04 (m, 2H), 7.88 (br d, J = 7.1 Hz, 1H), 7.58 - 7.44 (m, 2H), 3.96 - 3.75 (m, 4H), 3.71 - 3.65 (m, 1H), 3.63 - 3.52 (m, 3H), 3.45 - 3.22 (m, 3H), 3.03 (br t, J = 5.9 Hz, 3H), 2.84 (br d, J = 12.9 Hz, 3H).
Example 29: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-
8-oxo-N-pyrrolidin-3-yl-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 11%
LCMS (ESI+) : m/z 490.3 (M + H)+, Rt: 1.867 min. XH NMR (400 MHz, D2O) 6 = 8.65 (br d, J = 12.3 Hz, 1H), 8.46 - 8.28 (m, 1H), 7.64 (br d, J = 6.0 Hz, 1H), 7.37 (br t, J = 7.3 Hz, 1H), 7.28 - 7.20 (m, 1H), 4.51 - 4.39 (m, 1H), 4.12 - 3.99 (m, 1H), 3.95 - 3.58 (m, 4H), 3.57 - 3.48 (m, 4H), 3.47 - 3.23 (m, 4H), 3.19 - 3.08 (m, 1H), 3.05 - 2.93 (m, 3H), 2.60 - 2.42 (m, 1H), 2.15 - 2.02 (m, 1H).
Example 30: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidyl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 17.46%
LCMS (ESI+) : m/z 504.3 (M + H)+, Rt: 1.844 min. XH NMR (400 MHz, D2O) 6 = 8.75 (br s, 1H), 8.55 - 8.34 (m, 1H), 7.77 - 7.55 (m, 1H), 7.42 (br t, J = 7.4 Hz, 1H), 7.30 (br d, J = 8.1 Hz, 1H), 4.10 - 3.94 (m, 2H), 3.91 - 3.78 (m, 1H), 3.70 (br d, J = 3.0 Hz, 1H), 3.52 (br d, J = 5.5 Hz, 6H), 3.43 - 3.36 (m, 1H), 3.33 - 3.07 (m, 4H), 2.99
(br d, J = 17.8 Hz, 3H), 2.35 - 2.18 (m, 2H), 1.95 - 1.76 (m, 2H).
Example 31: N-(2-(methylamino)ethyl)-2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo[3,,2,: l,6]pyrido[2,3-d]- pyrimidine-6-carboxamide
Yield: 71%. Isolated as HCI salt.
LCMS (ESI+) : m/z 478.2 (M + H)+, Rt: 1.272 min. 1H NMR (400 MHz, DMSO-de) 6 = 11.37 (br s, 1H), 10.32 (t, J = 5.8 Hz, 1H), 9.23 (t, J = 7.0 Hz, 1H), 9.16 (d, J = 9.4 Hz, 1H), 9.00 - 8.87 (m, 2H), 7.99 (dd, J = 1.2, 7.7 Hz, 1H), 7.58 - 7.46 (m, 2H), 4.08 - 3.94 (m, 1H), 3.92 - 3.77 (m, 4H), 3.73 - 3.60 (m, 3H), 3.45 - 3.23 (m, 3H), 3.17 - 2.98 (m, 3H), 2.84 (dd, J = 4.8, 9.8 Hz, 3H), 2.60 (t, J = 5.2 Hz, 3H).
The following examples were synthesised according to the method outlined in Synthetic Route 11 using commercially available starting materials:
Synthetic Route 12
Example 32: 2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N- (pyrrolidin-2-ylmethyl)-5,7-dihydrobenzo[4',5,]imidazo[ l',2':l,6]pyrido[2,3- d]pyrimidine-6-carboxamide
Ethyl 2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7- dihydrobenzo[4',5']imidazo[ l',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate:
To a mixture of ethyl 4-chloro-8-oxo-l,3,5,l l-tetraazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2(7),3,5,9,12,14,16-heptaene-9-carboxylate (1.5 g, 4.38 mmol, 1 eq) in MeCN (15 mL) was added 5-methyl-2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrole (1.1 g, 8.75 mmol, 2 eq) and DIEA (1.51 g, 13.13 mmol, 3 eq). The mixture was stirred at 25°C for 12 h. The mixture was concentrated in vacuo and triturated with MeCN (15 mL) for 5 min. The residue was collected by filtration and the filter cake was triturated with methyl tert-butyl ether (15 mL) for 5 min. After filtration, the filter cake was collected to give the title compound (1.1 g, 2.54 mmol, 58.12% yield) as a yellow solid. LCMS (ESI+) : m/z 433.1 (M + H)+, Rt: 0.319 min.
tert-butyl 2-((2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo- 5,7-dihydrobenzo[4', 5' ] imidazo [ l',2': 1,6] pyrido[ 2,3- d]pyrimidine-6- carboxamido)methyl)pyrrolidine- 1-carboxylate : To a mixture of ethyl 2-(5- methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo[4',5']- imidazo[l',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (0.3 g, 693.68 pmol, 1 eq) in DMF (3 mL) was added tert-butyl 2-(aminomethyl)pyrrolidine-l-carboxylate (277.86 mg, 1.39 mmol, 2 eq) and DBU (316.81 mg, 2.08 mmol, 313.67 pL, 3 eq). The mixture was heated to 110°C and stirred for 12 h. The reaction was poured into water (30 mL) and stirred for 5 min. The solid was collected by filtration to give the title compound (0.2 g, 340.90 pmol, 49.14% yield) as a yellow solid. The crude product was used in the next step directly without purification. LCMS (ESI+) : m/z 587.5 (M + H)+, Rt: 0.409 min.
2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N-(pyrrolidin-2- ylmethyl )-5,7-dihydrobenzo[4', 5' ] imidazo [ l',2': 1,6] pyrido[ 2, 3-d] pyrimidine- 6-carboxamide: A mixture of tert- butyl 2-((2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo[4',5']imidazo[l',2' : l,6]pyrido[2,3-d]- pyrimidine-6-carboxamido)methyl)pyrrolidine-l-carboxylate (0.2 g, 340.90 pmol, 1 eq) in HCI/dioxane (2 mL) was stirred at 25°C for 2 h. The mixture was concentrated in vacuo. The crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)-ACN];gradient: l%-25% B over 8.0 min) to give the title compound (Example 32, 93.2 mg, 174.02 pmol, 51.05% yield, 97.66% purity, HCI salt) as a yellow solid. LCMS (ESI+) : Rt: 1.257 min, m/z 487.3 (M + H) + . XH NMR (400 MHz, DMSO-d6 + D2O) 6 = 9.17 (d, J = 1.6 Hz, 1H), 8.72 (br d, J = 8.1 Hz, 1H), 7.79 (d, J = 7.9 Hz, 1H), 7.51 - 7.45 (m, 1H), 7.44 - 7.37 (m, 1H), 4.12 - 3.99 (m, 1H), 3.96 - 3.73 (m, 5H), 3.72 - 3.55 (m, 3H), 3.34 (br d, J = 11.0 Hz, 2H), 3.30 - 3.14 (m, 3H), 3.12 - 2.95 (m, 1H), 2.85 (br d, J = 8.3 Hz, 3H), 2.13 - 2.03 (m, 1H), 2.02 - 1.83 (m, 2H), 1.80 - 1.67 (m, 1H).
The following examples 33-37 were synthesised according to the method outlined in
Synthetic Route 12 using commercially available starting materials:
Example 33: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidylmethyl)-l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 54%. Isolated as HCI salt.
LCMS (ESI+) : m/z 501.3 (M + H)+, Rt: 1.794 min. XH NMR (400 MHz, DMSO-d6) 6 = 9.11 (s, 1H), 8.66 (br d, J = 8.1 Hz, 1H), 7.74 (d, J = 7.9 Hz, 1H), 7.52 - 7.42 (m, 1H), 7.41 - 7.33 (m, 1H), 4.09 - 3.93 (m, 1H), 3.92 - 3.84 (m, 2H), 3.79 (br d, J = 18.8 Hz, 2H), 3.70 - 3.52 (m, 2H), 3.51 - 3.34 (m, 2H), 3.33 - 3.25 (m, 4H), 3.25 - 3.15 (m, 1H), 3.09 - 2.95 (m, 1H), 2.88 (br d, J = 3.5 Hz, 1H), 2.84 (br d, J = 8.8 Hz, 3H), 1.91 - 1.77 (m, 3H), 1.50 - 1.35 (m, 2H).
Example 34: N-(aminomethyl)-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo- [3,4-c]pyrrol-5-yl)-8-oxo-l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 38%. Isolated as HCI salt.
LCMS (ESI+) : m/z 447.3 (M + H)+, Rt: 1.523 min. XH NMR (400 MHz, DMSO-c/6) 6 = 12.99 - 12.76 (m, 1H), 11.51 - 11.29 (m, 1H), 10.37 (br d, J = 2.1 Hz, 1H), 9.07 (d, J = 6.5 Hz, 1H), 8.59 (d, J = 8.1 Hz, 1H), 8.20 (br s, 3H), 7.76 (d, J = 8.0 Hz, 1H), 7.50 - 7.39 (m, 1H), 7.38 - 7.29 (m, 1H), 4.06 - 3.96 (m, 1H), 3.91 - 3.77 (m, 4H), 3.68 - 3.54 (m, 3H), 3.44 - 3.29 (m, 2H), 3.25 (br s, 1H), 3.11 - 2.95 (m, 3H), 2.82 (t, J = 4.4 Hz, 3H).
Example 35: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-
8-oxo-N-pyrrolidin-3-yl-l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 58%. Isolated as HCI salt.
LCMS (ESI+) : m/z 473.3 (M + H)+, Rt: 1.758 min. XH NMR (400 MHz, DMSO-c/6) 6 = 12.87 (br s, 1H), 11.59 - 11.27 (m, 1H), 10.52 (br d, J = 5.8 Hz, 1H), 9.69 (br d, J = 3.4 Hz, 1H), 9.60 - 9.46 (m, 1H), 9.03 (d, J = 3.9 Hz, 1H), 8.53 (dd, J = 3.9, 7.9 Hz, 1H), 7.73 (d, J = 8.0 Hz, 1H), 7.43 (t, J = 7.7 Hz, 1H), 7.36 - 7.28 (m, 1H), 4.65 -
4.52 (m, 1H), 4.03 - 3.90 (m, 1H), 3.89 - 3.74 (m, 4H), 3.70 - 3.49 (m, 2H), 3.41 -
3.20 (m, 5H), 3.16 - 2.96 (m, 2H), 2.86 - 2.77 (m, 3H), 2.37 - 2.25 (m, 1H), 1.96 (br dd, J = 5.8, 12.4 Hz, 1H).
Example 36: 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)- 8-oxo-N-(4-piperidyl)-l, 3,5, ll-tetrazatetracyclo[8.7.0.02'7.012'17] heptadeca- 2, 4, 6, 9, 12(17), 13, 15-heptaene-9-carboxamide
Yield: 62.50%. Isolated as HCI salt.
LCMS (ESI+) : m/z 487.3 (M + H)+, Rt: 1.812 min. XH NMR (400 MHz, DMSO-d6) 6 = 12.91 (br s, 1H), 11.45 - 11.11 (m, 1H), 10.46 (br d, J = 5.0 Hz, 1H), 9.23 - 9.09 (m, 2H), 9.08 (d, J = 3.3 Hz, 1H), 8.60 (t, J = 8.5 Hz, 1H), 7.75 (d, J = 8.0 Hz, 1H), 7.52 - 7.41 (m, 1H), 7.38 - 7.28 (m, 1H), 4.11 (br d, J = 6.8 Hz, 1H), 4.04 - 3.95 (m, 1H), 3.90 - 3.76 (m, 4H), 3.69 - 3.53 (m, 1H), 3.36 (br dd, J = 8.2, 18.2 Hz, 2H), 3.25 (br s, 3H), 3.12 - 2.96 (m, 3H), 2.82 (t, J = 4.1 Hz, 3H), 2.13 (br d, J = 4.8 Hz, 2H), 1.77 (br d, J = 10.6 Hz, 2H).
Example 37: N-(2-(methylamino)ethyl)-2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo[4',5']imidazo[l,,2,: l,6]pyrido[2,3- d]pyrimidine-6-carboxamide
Yield: 36%. Isolated as HCI salt.
LCMS (ESI+): m/z 461.2 (M+H) +, Rt: 1.719 min. XH NMR (400 MHz, DMSO-cfe) 6 13.07 - 12.79 (m, 1H), 11.35 - 11.07 (m, 1H), 10.54 - 10.28 (m, 1H), 9.28 - 9.05 (m,
1H), 9.00 - 8.79 (m, 2H), 8.77 - 8.67 (m, 1H), 7.80 (br d, J = 8.0 Hz, 1H), 7.57 -
7.29 (m, 2H), 3.81 - 3.75 (m, 2H), 3.74 - 3.61 (m, 4H), 3.53 - 3.23 (m, 4H), 3.20 -
2.91 (m, 4H), 2.82 (br d, J = 4.9 Hz, 3H), 2.59 (br d, J = 4.6 Hz, 3H).
Synthetic Route 13
Example 38: 4-(2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrol-5-yl)-8- oxo-N-(pyrrolidin-2-ylmethyl)-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9-carboxamide
Ethyl 4-(5-tert-butoxycarbonyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol- 2-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca- 2, 4, 6, 9, 12( 17), 13, 15-heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8- oxo-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2(7),3,5,9,12,14,16- heptaene-9-carboxylate (0.5 g, 1.39 mmol, 1 eq} in ACN (5 mL) was added tert-butyl 2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrole-5-carboxylate (1.48 g, 6.94 mmol, 5 eq}. The mixture was stirred at 25°C for 12 hrs. The reaction mixture was concentrated under vacuum and the crude product was triturated with ACN (5 mL) at 25°C for 2 hrs to give the title compound (0.6 g, 1.08 mmol, 77.87% yield, 88.9% purity) as a yellow solid. LCMS (ESI+): m/z 536.3 (M + H)+, Rt: 0.553 min. 1H NMR (400 MHz, DMSO-de) 6 = 9.48 - 9.35 (m, 1H), 9.14 (s, 1H), 8.04 (d, J = 8.3 Hz, 1H), 7.71 - 7.58 (m, 1H), 7.51 (t, J = 7.3 Hz, 1H), 4.33 (q, J = 7.2 Hz, 2H), 4.07 - 3.89 (m, 2H), 3.60 - 3.54 (m, 2H), 3.12 - 3.08 (m, 2H), 3.03 (br s, 2H), 2.65 (br s, 2H), 1.39 (br s, 9H), 1.32 (t, J = 7.1 Hz, 3H).
Tert-butyl 2-[9-[(l-tert-butoxycarbonylpyrrolidin-2-yl)methylcarbamoyl]-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca- 2,4,6,9,12(17),13,15-heptaen-4-yl]-l,3,3a,4,6,6a-hexahydropyrrolo[3,4- c]pyrrole-5-carboxylate: To a solution of ethyl 4-(5-tert-butoxycarbonyl- l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carboxylate (0.15 g, 280.06 pmol, 1 eq} in DMF (1.5 mL) was added DBU (127.9 mg, 840.16 pmol, 3 eq} and tert-butyl 2-(aminomethyl)pyrrolidine-l-carboxylate (112.18 mg, 560.1 pmol, 2 eq}. The mixture was stirred at 110°C for 12 hrs. The resulting product was filtered to give the title compound (0.15 g, 184.83 pmol, 66.00% yield, 67% purity) as a yellow solid which was directly used in the next step without purification. LCMS (ESI+): m/z 690.3 (M + H)+, Rt: 0.645 min.
4-(2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-N- (pyrrolidin-2-ylmethyl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]- heptadeca-2,4,6,9, 12( 17),13,15-heptaene-9-carboxamide : To a solution of tertbutyl 2-[9-[(l-tert-butoxycarbonylpyrrolidin-2-yl)methylcarbamoyl]-8-oxo-ll-thia- l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaen-4-yl]- l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrole-5-carboxylate (0.15 g, 217.44 pmol, 1 eq} in HCI/dioxane (2 N, 1.5 mL) was stirred at 25°C for 2 hrs. The reaction mixture was concentrated under vacuum and the residue was purified by prep-HPLC (HCI condition, column : CD02-Waters Xbridge BEH C18 150*25*10 pm; mobile phase: [water(0.015% HCI)-ACN]; gradient: l%-27% B over 10 min) to give the title compound (Example 38, 30 mg, 65.73 pmol, 30.23% yield, 97.52% purity, HCI salt) as a yellow solid. LCMS (ESI+) : m/z 490.2 (M + H)+, Rt: 1.922 min. XH NMR (400 MHz, DMSO-de) 6 = 10.52 - 10.43 (m, 1H), 9.71 - 9.58 (m, 1H), 9.50 (br d, J = 2.0 Hz, 1H), 9.45 - 9.30 (m, 2H), 9.25 (s, 1H), 8.97 - 8.85 (m, 1H), 8.04 (br d, J = 7.4 Hz, 1H), 7.63 - 7.50 (m, 2H), 3.98 (br dd, J = 6.9, 11.8 Hz, 2H), 3.87 - 3.76 (m, 2H),
3.73 - 3.59 (m, 3H), 3.54 - 3.45 (m, 2H), 3.29 (br s, 2H), 3.25 - 3.12 (m, 4H), 2.15 - 2.05 (m, 1H), 2.01 - 1.93 (m, 1H), 1.91 - 1.83 (m, 1H), 1.75 - 1.65 (m, 1H).
The following example 39 was synthesised according to the method outlined in
Synthetic Route 13 using commercially available starting materials:
Example 39: 4-(2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrol-5-yl)-8- oxo-N-(pyrrolidin-2-ylmethyl)-l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17] heptadeca-2,4,6,9, 12(17), 13, 15-heptaene-9-carboxam ide
Yield: 32%
LCMS (ESI+) : m/z 473.3 (M + H)+, Rt: 1.765 min. XH NMR (400 MHz, DMSO-d6) 6 = 12.96 - 12.85 (m, 1H), 10.54 (br t, J = 5.7 Hz, 1H), 9.61 (br s, 3H), 9.12 (s, 1H), 9.03 (br d, J = 4.1 Hz, 1H), 8.66 (d, J = 7.9 Hz, 1H), 7.77 (d, J = 7.9 Hz, 1H), 7.51 - 7.42 (m, 1H), 7.41 - 7.33 (m, 1H), 4.02 - 3.88 (m, 2H), 3.82 - 3.68 (m, 4H), 3.64 (br d, J = 5.9 Hz, 1H), 3.47 (br d, J = 4.9 Hz, 2H), 3.33 - 3.12 (m, 6H), 2.12 - 2.03 (m, 1H), 2.01 - 1.94 (m, 1H), 1.88 (td, J = 7.6, 12.7 Hz, 1H), 1.76 - 1.64 (m, 1H).
Synthetic Route 14
Example 40: 2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N- (piperidin-4-yl)-5H-benzo [4,,5']thiazolo[3,,2': l,6]pyrido[2,3-d]pyrimidine- 6-carboxamide
Ethyl 2-(hexahydropyrrolo[3,4- c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']- thiazolo[3',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate : A mixture of ethyl 4- (5-tert-butoxycarbonyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl)-8-oxo-ll- th ia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17] heptadeca-2,4,6,9, 12 (17), 13,15-heptaene-
9-carboxylate (1 g, 1.87 mmol, 1 eq) in HCI/dioxane (10 mL) was stirred at 25°C for 2 h. LCMS showed material was consumed, 88% of product was generated. The mixture was concentrated in vacuo to give ethyl 2-(hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)- 5-oxo-5H-benzo[4',5']thiazolo[3',2': l,6]pyrido [2,3-d]pyrimidine-6-carboxylate (0.8 g, 1.84 mmol, 98.39% yield) as a yellow solid. The crude product was used in the next step without purification. LCMS (ESI+): Rt: 0.338 min, m/z 436.2 (M + H) + .
Ethyl 2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo [4,,5']thiazolo[3,,2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate: To a mixture of ethyl 2-(hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo [4',5']thiazolo- [3', 2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (0.3 g, 688.87 pmol, 1 eq) in DCE (1.5 mL) and MeOH (1.5 mL) was added acetaldehyde (5 M, 688.87 pL, 5 eq) and NaBH(OAc)3 (438.00 mg, 2.07 mmol, 3 eq). The mixture was heated to 40°C and stirred for 12 h. The mixture was concentrated in vacuo and the crude product was purified by prep-HPLC (column : Phenomenex Luna C18 100*30mm*5pm; mobile phase: [H2O(0.1% TFA)-ACN]; gradient: 10%-40% B over 9.0 min) to give the title compound (0.25 g, 539.31 pmol, 78.29% yield) as a yellow solid. LCMS (ESI+): Rt: 1.163 min, m/z 464.3 (M + H) + .
Tert-butyl 4-(2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol- 2(lH)-yl)-5-oxo- 5H- benzo[4',5,]thiazolo[3,,2' : 1,6] pyrido[ 2,3-d] pyrimidine-6-carboxamido)- piperidine-l-carboxylate: To a mixture of ethyl 2-(5-ethylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo [3', 2': l,6]pyrido[2,3-d]pyrimidine-6- carboxylate (0.2 g, 431.45 pmol, 1 eq) in DCM (2 mL) was added tert-butyl 4- aminopiperidine-l-carboxylate (172.82 mg, 862.90 pmol, 2 eq), DBU (197.05 mg, 1.29 mmol, 195.10 pL, 3 eq) and AICI3 (92.05 mg, 690.32 pmol, 37.72 pL, 1.6 eq) at 0°C. The mixture was stirred at 25°C for 3 h. The reaction mixture was quenched by
the addition of NH4CI (sat aq, 2 mL) at 25°C, and then extracted with DCM (3 x 5 mL). The combined organic layers were washed with saturated brine (2 x 2 mL), dried over Na2SC>4, filtered and concentrated under reduced pressure to give the title compound (0.1 g, 161.88 pmol, 37.52% yield) as a yellow solid. LCMS (ESI+) : Rt: 0.436 min, m/z 618.3 (M + H)+.
2-(5-ethylhexahydropyrrolo[ 3, 4-c] pyrrol- 2(lH)-yl)-5-oxo-N-(piperidin-4-yl)- 5H-benzo [4', 5'] thiazolo[3',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxamide: A mixture of tert-butyl 4-(2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H- benzo[4',5'] th iazolo[3',2' : 1,6] pyrido[2, 3-d] pyri mid ine-6-carboxamido) pi peridine- 1- carboxylate (0.1 g, 161.88 pmol, 1 eq) in HCI/dioxane (1 mL) was stirred at 25°C for 2 h. The mixture was concentrated in vacuo and the crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H2O (0.04% HCI)-ACN]; gradient: l%-35% B over 8.0 min) to give the title compound (Example 40, 45 mg, 78.97 pmol, 48.78% yield, 97.24% purity, HCI salt) as a yellow solid. LCMS (ESI+) : Rt: 1.328 min, m/z 518.3 (M + H) + . XH NMR (400 MHz, DMSO-d6) 6 = 10.78 - 10.51 (m, 1H), 10.49 - 10.41 (m, 1H), 9.51 - 9.40 (m, 1H), 9.30 (s, 1H), 8.85 - 8.56 (m, 2H), 8.13 - 8.01 (m, 1H), 7.69 - 7.49 (m, 2H), 4.19 - 4.03 (m, 2H), 4.01 - 3.79 (m, 4H), 3.76 - 3.60 (m, 1H), 3.28 - 3.16 (m, 5H), 3.15 - 2.94 (m, 4H), 2.10 (br d, J = 12.5 Hz, 2H), 1.75 - 1.65 (m, 2H), 1.61 - 1.46 (m, 1H), 1.25 (q, J = 7.0 Hz, 3H).
The following example was synthesised according to the method outlined in
Synthetic Route 15
Example 85: 2-(4-methylpiperazin-l-yl)-5-oxo-N-(piperidin-4-yl)-5,7- dihydrobenzo[4',5'] imidazo [ l',2':l,6]pyrido[2,3-d]pyrimidine-6- carboxamide
Ethyl 2-(4-methylpiperazin-l-yl)-5-oxo-5,7-dihydrobenzo[4',5' ]imidazo- [l',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate: To a solution of ethyl 4- chloro-8-oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02'7.012'17]heptadeca- 2,4,6,9,12(17),13,15-heptaene-9-carboxylate (1 g, 2.92 mmol, 1 eq) in ACN (15 mL) was added 1-methylpiperazine (1.46 g, 14.5 mmol, 1.62 mL, 5 eq) and the reaction was stirred at 25°C for 12 hrs. The mixture was concentrated under reduced pressure to give a residue. The crude product was triturated with ACN (15 mL) at 25°C for 20 min to give the title compound (0.9 g, 2.04 mmol, 69.8% yield, 92% purity) as a yellow solid. LCMS (ESI+) : m/z 407.3 (M + H)+, Rt: 1.024 min. XH NMR (400 MHz, DMSO-cfe) 6 12.75 - 12.00 (m, 1H), 8.99 (br s, 1H), 8.53 (br d, J = 7.8 Hz, 1H), 7.69 (br d, J = 4.9 Hz, 1H), 7.37 (br dd, J = 7.5, 13.5 Hz, 2H), 4.30 (br d, J = 6.8 Hz, 2H), 3.92 (br s, 4H), 2.46 (br s, 4H), 2.25 (br s, 3H), 1.32 (br t, J = 6.5 Hz, 3H).
Tert-butyl 4-(2-(4-methylpiperazin-l-yl)-5-oxo-5,7-dihydrobenzo[4',5'] imidazo [ 1', 2': 1,6] pyrido[ 2, 3-d] pyrimidine-6-carboxamido) piperidine- 1- carboxylate : To a solution of ethyl 2-(4-methylpiperazin-l-yl)-5-oxo-5,7- dihydrobenzo[4',5']imidazo[l',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (200 mg, 452 pmol, 1 eq) and tert-butyl 4-aminopiperidine-l-carboxylate (181.34 mg, 905.43 pmol, 2 eq) in DMF (2 mL) was added DBU (137 mg, 905 pmol, 136 pL, 2 eq). The mixture was stirred at 110°C for 12 hrs and concentrated in vacuo. The residue was purified by prep-HPLC (HCI condition, Column : CD06-Waters Xbidge C18 150*40*10 pm; mobile phase: [water (0.05%HCI)-ACN]; gradient: 0%-27% B over 11 min) to give the title compound (140 mg, 234 pmol, 51.8% yield, 94% purity) as a white solid. LCMS (ESI+) : m/z 561.3 (M + H)+, Rt: 3.064 min. XH NMR (400 MHz, DMSO-cfe) 6 13.06 (s, 1H), 10.41 (d, J = 7 A Hz, 1H), 10.26 - 9.92 (m, 1H), 9.23 (s, 1H), 8.66 (d, J = 8.1 Hz, 1H), 7.80 (d, J = 7.6 Hz, 1H), 7.53 - 7.46 (m, 1H), 7.45 - 7.37 (m, 1H), 5.11 - 4.69 (m, 2H), 4.11 - 3.98 (m, 1H), 3.85 - 3.74 (m, 2H), 3.66 - 3.45 (m, 3H), 3.22 (br d, J = 4.0 Hz, 2H), 3.13 - 3.05 (m, 2H), 2.88 (br s, 3H), 1.93 (br dd, J = 3.8, 9.1 Hz, 2H), 1.47 - 1.35 (m, 11H).
2-(4-methylpiperazin-l-yl)-5-oxo-N-(piperidin-4-yl)-5,7-dihydrobenzo[4',5']- imidazo [ l',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxamide: To tert-butyl 4-(2- (4-methylpiperazin-l-yl)-5-oxo-5,7-dihydrobenzo[4',5']imidazo[l',2' : l,6]pyrido[2,3- d]pyrimidine-6-carboxamido)piperidine-l-carboxylate (140 mg, 234 pmol, 1 eq) was added HCI/dioxane (2 N, 2 mL). The mixture was stirred at 25°C for 2 hrs. The mixture was concentrated under reduced pressure. The residue was purified by prep- HPLC (HCI condition, Column : CD06-Waters Xbidge C18 150*40*10 pm; mobile phase: [water(0.05%HCI)-ACN]; gradient: 0%-27% B over 11 min) to give the title compound (56 mg, 121 pmol, 51.7% yield, 99.7% purity, HCI salt) as a yellow solid. LCMS (ESI+) : m/z 461.1 (M + H)+, Rt: 1.432 min. XH NMR (400 MHz, DMSO-d6+D2O) 6 9.18 (s, 1H), 8.59 (d, J = 8.1 Hz, 1H), 7.76 (d, J = 7.9 Hz, 1H), 7.53 - 7.36 (m, 2H), 5.06 - 4.67 (m, 2H), 4.16 - 4.04 (m, 1H), 3.69 - 3.57 (m, 4H), 3.32 - 3.25 (m,
2H), 3.18 (br s, 2H), 3.08 (br t, J = 10.7 Hz, 2H), 2.87 (s, 3H), 2.20 - 2.08 (m, 2H), 1.71 (q, J = 10.1 Hz, 2H).
The following examples were synthesised according to the method outlined in Synthetic Route 15 using commercially available starting materials:
Synthetic Route 16
Example 88: 2-(5-Ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N- (piperidin-4-yl)-5,7-dihydrobenzo[4',5']imidazo[ l',2' : l,6]pyrido[2,3-d]- pyrimidine-6-carboxamide
Ethyl 4-(5-tert-butoxycarbonyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol- 2-yl)-8-oxo-l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17]heptadeca-
2, 4, 6, 9, 12( 17), 13, 15-heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8- oxo-l,3,5,ll-tetraazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15- heptaene-9-carboxylate (500 mg, 1.46 mmol, 1 eq} in ACN (5 mL) was added tertbutyl 2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrole-5-carboxylate (1.55 g, 7.29 mmol, 5 eq}. The mixture was stirred at 25°C for 12 hrs. The reaction mixture was concentrated under reduced pressure and the crude product was triturated with ACN (2 mL) at 25°C for 30 min to give the title compound (500 mg, 838.86 pmol, 57.5% yield, 87% purity) as a yellow solid. LCMS (ESI+) : m/z 519.2 (M + H)+, Rt: 0.468 min. XH NMR (400 MHz, DMSO-d6) 6 = 9.14 - 8.38 (m, 2H), 7.77 - 7.55 (m, 1H), 7.49 - 7.12 (m, 2H), 4.51 - 4.22 (m, 2H), 4.02 - 3.88 (m, 1H), 3.58 (br dd, J = 4.6, 14.6 Hz, 3H), 3.46 - 3.42 (m, 2H), 3.11 (br d, J = 10.1 Hz, 2H), 2.82 - 2.76 (m, 2H), 1.42 - 1.38 (m, 12H).
Ethyl 2-(hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7-di hydrobenzo- [4',5'] imidazo[ l',2' : 1,6] pyrido[2,3-d] pyrimidine-6-carboxylate: To ethyl 2-(5- (tert-butoxycarbonyl)hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7- dihydrobenzo[4',5']imidazo[l',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (2.5 g, 4.82 mmol, 1 eq) was added HCI/dioxane (10 mL) and the reaction was stirred at 25°C for 2 h. The mixture was concentrated in vacuo and the crude product was triturated with ACN (30 mL) for 30 min. After filtration, the filter cake was collected to give the title compound (1.8 g, 4.04 mmol, 83.87% yield, 94% purity) as a yellow solid. LCMS (ESI+): m/z 419.2 (M + H)+, Rt: 0.301 min.
Ethyl 2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7- dihydrobenzo[4',5']imidazo[ l',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate : To a solution of ethyl 2-(hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7- dihydrobenzo[4',5']imidazo[l',2' : 1,6] pyrido[2,3-d]pyrimidine-6-carboxylate (0.5 g, 1.19 mmol, 1 eq) in DCE (3 mL) and MeOH (3 mL) was added acetaldehyde (5 M, 2.39 mL, 10 eq). The mixture was stirred at 40°C for 2 h, then NaBH(OAc)s (759.74 mg, 3.58 mmol, 3 eq) was added, and the reaction was stirred at 40°C for 12 h. The mixture was extracted with dichloromethane (3 x 3 mL) and the combined organic phases were washed with saturated brine (3 mL), before being dried over anhydrous Na2SC>4, and concentrated in vacuo. The crude product was triturated with ACN (10 mL) for 30 min and collected by filtration to give the title compound (0.4 g, 788.35 pmol, 65.98% yield, 88% purity) as a yellow solid. LCMS (ESI+): m/z 447.3 (M + H)+, Rt: 0.347 min.
tert-Butyl 4-(2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7- dihydrobenzo [4,,5']imidazo[ l',2,: l,6]pyrido[2,3-d]pyrimidine-6- carboxamido)piperidine- 1-carboxylate : Ethyl 2-(5-ethylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo [4', 5'] imidazo [l',2' : l,6]pyrido[2,3-d]- pyrimidine-6-carboxylate (0.17 g, 380.74 pmol, 1 eq), tert-butyl 4-aminopiperidine-l- carboxylate (114.38 mg, 571.11 pmol, 1.5 eq) and DBU (173.89 mg, 1.14 mmol, 172.16 pL, 3 eq) were taken up into a microwave tube in DMF (2 mL). The sealed tube was heated to 150°C and stirred for 1 h under microwave irradiation. The mixture was extracted with dichloromethane (3 x 5 mL) and the combined organic phases were washed with saturated brine (5 mL), before being dried over anhydrous Na2SC>4, and concentrated in vacuo to give the title compound (0.1 g, 101.55 pmol, 26.67% yield, 61% purity) as a yellow solid. The crude product was used in the next step directly without purification. LCMS (ESI+) : m/z 601.4 (M + H)+, Rt: 0.403 min.
2-(5-ethylhexahydropyrrolo[ 3, 4-c] pyrrol- 2(lH)-yl)-5-oxo-N-(piperidin-4- yl)-5,7-dihydrobenzo[4',5']imidazo[ l',2' : 1,6] pyrido[ 2,3-d] pyrimidine-6- carboxamide: To tert-butyl 4-(2-(5-ethylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5- oxo-5,7-dihydrobenzo[4',5']imidazo[l',2' : l,6]pyrido[2,3-d]pyrimidine-6- carboxamido)piperidine-l-carboxylate (0.1 g, 166.47 pmol, 1 eq) was added HCI/dioxane (2 mL) and the reaction was stirred at 25°C for 2 h. The mixture was concentrated in vacuo and the crude product was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm; mobile phase: [H20(0.04% HCI)-ACN]; gradient: l%-30% B over 8.0 min) to give the title compound (0.038 g, 74.03 pmol, 44.47% yield, 97.53% purity) as a yellow solid. LCMS (ESI+) : m/z 501.3 (M + H)+, Rt: 1.286 min. XH NMR (400 MHz, DMSO-d6+D2O) 6= 9.13 (d, J = 2.4 Hz, 1H), 8.76 - 8.66 (m, 1H), 7.75 (d, J = 8.0 Hz, 1H), 7.53 - 7.36 (m, 2H), 4.09 (br s, 2H), 3.91 (br s, 4H), 3.73 - 3.53 (m, 2H), 3.46 - 3.34 (m, 2H), 3.30 - 3.18 (m, 4H), 3.07 (br t, J = 10.8 Hz, 2H), 3.01 - 2.89 (m, 1H), 2.13 (br d, J = 12.0 Hz, 2H), 1.76 - 1.63 (m, 2H), 1.27 - 1.16 (m, 3H).
The following examples were synthesised according to the method outlined in Synthetic Route 16 using commercially available starting materials:
Synthetic Route 17
Example 90: N-((lr,4r)-4-aminocyclohexyl)-2-(5-methylhexa hydropyrrolo [3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo [3',2':l,6]pyrido[2,3- d]pyrimidine-6-carboxamide
2-(5-Methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']- thiazolo[3',2': 1,6] pyrido[2,3-d]pyrimidine-6-carboxylic acid: To a solution of ethyl 2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']- thiazolo[3',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (300 mg, 667.37 pmol, 1 eq} in THF (1 mL), MeOH (1 mL) and H2O (1 mL) was added LiOH.H2O (42.01 mg, 1.00 mmol, 2 eq}. The mixture was stirred at 50°C for 12 h. The mixture was filtered and the filter cake was collected. The filter cake was triturated with MeOH (5 mL), filtered, and the product was collected to give the title compound (320 mg, 607.40 pmol, 91.01% yield, 80% purity) as a yellow solid. LCMS (ESI+): m/z 422.1 (M + H)+, Rt: 0.345 min.
tert-Butyl ((lr,4r)-4-(2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)- 5-oxo-5H-benzo [4,,5']thiazolo[3,,2': l,6]pyrido[2,3-d]pyrimidine-6- carboxamido)cyclohexyl)carbamate : To a solution of 2-(5-methyl- hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo [3',2' : 1,6]- pyrido[2,3-d]pyrimidine-6-carboxylic acid (320 mg, 759.24 pmol, 1 eq} in DMF (5 mL) was added HATU (433.03 mg, 1.14 mmol, 1.2 eq and DIEA (294.37 mg, 2.28 mmol, 396.73 pL, 3 eq}. The mixture was stirred at 25°C for 0.5 h. tert-Butyl N-(4- aminocyclohexyl)carbamate (325.42 mg, 1.52 mmol, 2 eq} was added and the mixture stirred at 25°C for 2 h. The mixture was poured into H2O (3 mL) and extracted with DCM (3 x 5 mL). The combined organic phases were washed with saturated brine (10 mL), dried over anhydrous Na?SO4 and concentrated in vacuo. The crude product was triturated with MeOH (5 mL) and collected by filtration to give the title compound (300 mg, 485.63 pmol, 63.96% yield) as a yellow solid. LCMS (ESI+): m/z 618.4 (M + H)+, Rt: 0.436 min.
N-((lr,4r)-4-aminocyclohexyl)-2-(5-methylhexahydropyrrolo[ 3, 4-c] pyrrol- 2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo[3,,2,:l,6]pyrido[2,3-d]pyrimidine- 6-carboxamide: A solution of tert-butyl ((lr,4r)-4-(2-(5-methylhexahydropyrrolo- [3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5'] thiazolo[3',2' : l,6]pyrido[2,3-d]- pyrimidine-6-carboxamido)cyclohexyl)carbamate (300 mg, 485.63 pmol, 1 eq) in HCI/dioxane (3 mL) was stirred at 25°C for 2 h. The mixture was concentrated in vacuo and the crude product was triturated with ACN (5 mL). The product was collected by filtration and purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm;mobile phase: [H20(0.04% HCI)-ACN];gradient: l%-30% B over 8.0 min) to give the title compound (20 mg, 36.32 pmol, 56.09% yield, 94.0% purity) as a yellow solid. LCMS (ESI+) : m/z 518.2 (M + H)+, Rt: 1.356 min. XH NMR (400 MHz, DMSO-d6+D2O) 6 = 9.41 - 9.33 (m, 1H), 9.23 (d, J = 1.0 Hz, 1H), 8.00 (br d, J = 7.6 Hz, 1H), 7.65 - 7.47 (m, 2H), 4.07 - 3.96 (m, 1H), 3.95 - 3.63 (m, 6H), 3.44 - 3.18 (m, 3H), 3.13 - 2.98 (m, 2H), 2.85 (d, J = 10.6 Hz, 3H), 2.01 (br s, 4H), 1.54 - 1.31 (m, 4H).
Synthetic Route 18
Example 91: 2-(4-methyl-l,4-diazepan-l-yl)-5-oxo-N-(pyrrolidin-2- ylmethyl )-5H-benzo[4',5,]oxazolo[3,,2' : 1,6] pyrido[2,3-d] pyrimidine-6- carboxamide
2,4-Dichloropyrimidine-5-carbonyl chloride: A mixture of acid (1.00 g, 5.18 mmol, 1 eq) in SOC (10.00 mL) was stirred at 65°C for 12 h. TLC showed the reaction was completed. The mixture was concentrated in vacuo to give the desired product (1.00 g, 4.73 mmol, 91.28% yield) as a yellow solid. The crude product was used in the next step without further purification.
Ethyl 2-chloro-5-oxo-5H-benzo[4',5']oxazolo[3,,2,:l,6]pyrido[2,3-d]- pyrimidine- 6-carboxylate: To a solution of ethyl 2-(benzo[d]oxazol-2-yl)acetate (1.42 g, 6.91 mmol, 1 eq) in THF (20 mL) was added MgC (987.21 mg, 10.37 mmol, 425.52 pL, 1.5 eq) at 25 °C. Then to the mixture was added 2,4-dichloropyrimidine-5- carbonyl chloride (2.0 g, 9.52 mmol, 83.06% yield, 75% purity) with THF (20 mL) dropwise at -10°C. Then to the mixture was added DIEA (2.68 g, 20.74 mmol, 3.61 mL, 3 eq) dropwise at -25°C. The mixture was stirred at 25°C for 2 h. LCMS showed material consumed and 60% of product generated. The mixture was concentrated in vacuo. The residue was triturated with water (50 mL) for 30 min. After filtration, the filter cake was collected to give crude product. Then the crude product was triturated with ACN (50 mL) for 30 min. After filtration, the filter cake was collected to give ethyl 2-chloro-5-oxo-5H-benzo[4',5']oxazolo[3',2': l,6]pyrido[2,3-d]- pyrimidine-6-carboxylate (1.8 g, 5.24 mmol, 84.18% yield) as yellow solid. LCMS (ESI+): m/z 343.9 (M + H)+, Rt: 0.442 min.
Ethyl 2-(4-methyl-l,4-diazepan-l-yl)-5-oxo-5H-benzo[4',5']oxazolo [3',2' : l,6]pyrido[ 2,3-d] pyrimidine-6-carboxylate : To a solution of ethyl 2- chloro-5-oxo-5H-benzo[4',5']oxazolo[3',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (1.8 g, 5.24 mmol, 1 eq) in ACN (20 mL) was added l-methyl-l,4-diazepane (1.20 g, 10.48 mmol, 1.45 mL, 2 eq). The mixture was stirred at 25°C for 12 hr. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (column: Phenomenex luna C18 100*40mm*5 pm;mobile phase: [H20(0.04% HCI)-ACN]; gradient: l%-30% B over 8.0 min) to give the title compound (0.8 g, 1.90 mmol, 36.2% yield) as a yellow solid. LCMS (ESI+): m/z 422.1 (M + H)+, Rt: 0.319 min.
2-(4-Methyl-l,4-diazepan-l-yl)-5-oxo-5H-benzo[4',5']oxazolo[3,,2,:l,6]- pyrido[ 2,3-d] pyrimidine-6-carboxylic acid : A solution of ethyl 2-(4-methyl-l,4- diazepan-l-yl)-5-oxo-5H-benzo[4',5']oxazolo[3',2' : l,6]pyrido[2,3-d]pyrimidine-6- carboxylate (500 mg, 1.19 mmol, 1 eq) in TFA (2 mL) and H2O (6 mL) was stirred at 60°C for 12 hr. The mixture was filtered and the filter cake was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm;mobile phase: [H20(0.04% HCI)- ACN]; gradient: l%-25% B over 8.0 min) to give the title compound (200 mg, 508.39 pmol, 42.85% yield) as white solid. LCMS (ESI+) : m/z 394.2 (M + H)+, Rt: 1.324 min. XH NMR (400 MHz, DMSO-d6+D2O) 6 = 9.33 (d, 7 = 9.1 Hz, 1H), 8.61 - 8.44 (m, 1H), 8.02 - 7.96 (m, 1H), 7.64 (dd, 7 = 3.1, 5.6 Hz, 2H), 4.73 - 4.32 (m, 1H), 4.20 - 3.88 (m, 3H), 3.85 - 3.62 (m, 1H), 3.47 (br s, 1H), 3.41 - 3.18 (m, 2H), 2.82 (br s, 3H), 2.40 - 2.30 (m, 1H), 2.24 (br d, 7 = 4.5 Hz, 1H).
tert-Butyl 2-((2-(4-methyl-l,4-diazepan-l-yl)-5-oxo-5H-benzo[4',5'] oxazolo[3',2' : 1,6] pyrido[2,3-d] pyrimidine-6-carboxamido) methyl) pyrrolidine-l-carboxylate: To a solution of 2-(4-methyl-l,4-diazepan-l-yl)-5- oxo-5H-benzo[4',5']oxazolo[3',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylic acid (120 mg, 305.04 pmol, 1 eq) in DMF (1 mL) was added HATU (115.98 mg, 305.04 pmol, 1 eq) and DIEA (118.27 mg, 915.11 pmol, 159.39 pL, 3 eq). The mixture was stirred at 25°C for 30 min. Then the mixture was added tert-butyl 2-(aminomethyl)- pyrrolidine-l-carboxylate (73.31 mg, 366.04 pmol, 1.2 eq). The mixture was stirred at 25°C for 2 h. The reaction was then poured into ice-water (w/w = 1/1) (10 mL) and extracted with DCM (3 x 1 mL). The combined organic phases were washed with saturated brine (5 mL), dried over anhydrous Na?SO4 and concentrated in vacuo to give the title compound (80 mg, 138.97 pmol, 45.56% yield) as a yellow solid. The crude product was used in the next step directly without purification. LCMS (ESI+) : m/z 576.3 (M + H)+, Rt: 0.383 min.
2-(4-Methyl-l,4-diazepan-l-yl)-5-oxo-N-(pyrrolidin-2-ylmethyl)-5H -benzo [4,,5']oxazolo[3,,2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxamide : A solution of tert-butyl 2-((2-(4-methyl-l,4-diazepan-l-yl)-5-oxo-5H-benzo[4',5']oxazolo[3',2' : l,6] pyrido[2,3-d]pyrimidine-6-carboxamido)methyl)pyrrolidine-l-carboxylate (80 mg,
138.97 pmol, 1 eq) in HCI/dioxane (2 mL) was stirred at 25°C for 2 hr. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (column : Phenomenex luna C18 100*40mm*5 pm;mobile phase: [H20(0.04% HCI)-ACN]; gradient: l%-20% B over 8.0 min) to give the title compound (32.1 mg, 67.50 pmol, 48.57% yield) as a yellow solid. LCMS (ESI+) : m/z 476.4 (M + H)+, Rt: 1.211 min. XH
NMR (400 MHz, DMSO-d6+D2O) 6 = 9.23 (d, J = 8.4 Hz, 1H), 8.56 - 8.39 (m, 1H), 7.88 - 7.80 (m, 1H), 7.62 - 7.52 (m, 2H), 4.69 - 4.35 (m, 1H), 4.18 - 3.98 (m, 2H),
3.97 - 3.79 (m, 2H), 3.73 - 3.59 (m, 3H), 3.46 - 3.36 (m, 1H), 3.31 - 3.11 (m, 4H), 2.81 (s, 3H), 2.45 - 2.17 (m, 2H), 2.12 - 2.02 (m, 1H), 2.01 - 1.83 (m, 2H), 1.77 - 1.63 (m, 1H).
The following example was synthesised according to the method outlined in
Synthetic Route 19
Example 93: 4-(5-methyl-3,3a,4,6,7,7a-hexahydro-lH-pyrrolo[3,4-c]pyridin-
2-yl)-8-oxo-N-(4-piperidyl)-ll-thia-l,3,5-triazatetracyclo [8.7.0.02,7.012, 17] heptadeca-2, 4,6,9, 12( 17), 13, 15-heptaene-9-carboxamide
0-65°C, 12 hrs
5-methyl-l,2,3,3a,4,6,7,7a-octahydropyrrolo[3,4-c]pyridine: To a solution of tert-butyl l,2,3,3a,4,6,7,7a-octahydropyrrolo[3,4-c]pyridine-5-carboxylate (900 mg, 3.42 mmol, 1 eq, HCI) in THF (9 mL) was added LiAIE (2.5 M, 4.11 mL, 3 eq} at 0°C The mixture was stirred at 65 °C for 12 hrs. The mixture was cooled to 0°C and quenched with Na2SO4 10H2O (5 g). The resulting slurry was filtered and the filtrate was concentrated under reduced pressure to give the title compound (450 mg, 3.11 mmol, 90.79% yield, 96.90% purity) as a colorless oil which was directly used in the next step without purification. LCMS (ESI+): m/z 141.2 (M + H)+, Rt: 0.096 min.
Ethyl 4-(5-methyl-3,3a,4,6,7,7a-hexahydro-lH-pyrrolo[3,4-c]pyridin-2-yl)-8- oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca-
2, 4, 6, 9, 12( 17), 13, 15-heptaene-9-carboxylate: To a solution of ethyl 4-chloro-8- oxo- 11-th ia-1, 3,5-triazatetracyclo[8.7.0.02'7.012'17] heptadeca-2, 4, 6, 9, 12 (17), 13,15- heptaene-9-carboxylate (500 mg, 1.39 mmol, 1 eq} in ACN (5 mL) was added DIEA (359.22 mg, 2.78 mmol, 484.12 pL, 2 eq} and 5-methyl-l,2,3,3a,4,6,7,7a- octahydropyrrolo[3,4-c]pyridine (292.31 mg, 2.08 mmol, 1.5 eq}. The mixture was stirred at 25 °C for 12 hrs. The reaction mixture was concentrated under reduced pressure and the crude product was triturated with ACN (10 mL) at 25 °C for 30 min
to give the title compound (600 mg, 1.18 mmol, 84.62% yield, 90.85% purity) as a faint yellow solid. LCMS (ESI+): m/z 464.2. (M + H)+, Rt: 0.339min.
tert-Butyl 4-[[4-(5-methyl-3,3a,4,6,7,7a-hexahydro-lH-pyrrolo[3,4-c]- pyridin-2-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17] heptadeca-2, 4, 6, 9, 12(17), 13, 15-heptaene-9-carbony I] amino] piperidine- 1- carboxylate: To a solution of ethyl 4-(5-methyl-3,3a,4,6,7,7a-hexahydro-lH-pyrrolo- [3,4-c]pyridin-2-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17] heptadeca - 2,4,6,9,12(17),13,15-heptaene-9-carboxylate (300 mg, 647.18 pmol, 1 eq} and tertbutyl 4-aminopiperidine-l-carboxylate (194.42 mg, 970.77 pmol, 1.5 eq} in DCM (3 mL) was added AICI3 (138.07 mg, 1.04 mmol, 56.59 pL, 1.6 eq} and DBU (197.05 mg, 1.29 mmol, 195.10 pL, 2 eq} at 0 °C. The mixture was stirred at 25 °C for 2 hrs. The reaction mixture was quenched by the addition of saturated ammonium chloride solution (10 mL) at 0°C, and then extracted with DCM (3 x 5 mL). The combined organic layers were dried over Na2SC>4, filtered and concentrated under reduced pressure to give the title compound (200 mg, 323.75 pmol, 50.02% yield) as a brown solid which was directly used in the next step without purification. LCMS (ESI+): m/z 618.3. (M + H)+, Rt: 0.418 min.
4-(5-Methyl-3,3a,4,6,7,7a-hexahydro-lH-pyrrolo[3,4-c]pyridin-2-yl)-8-oxo- N-(4-piperidyl)-l l-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca- 2, 4, 6, 9, 12( 17), 13, 15-heptaene-9-carboxamide: A solution of tert-butyl 4-[[4-(5- methyl-3,3a,4,6,7,7a-hexahydro-lH-pyrrolo[3,4-c]pyridin-2-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carbonyl]amino]piperidine-l-carboxylate (200.00 mg, 323.75 pmol, 1 eq} in HCI/dioxane (2 N, 2 mL) was stirred at 25 °C for 2 hrs. The reaction mixture was concentrated under reduced pressure and the residue was purified by prep-HPLC (HCI
condition, column : CD24-XPT C18 150*25*7 pm; mobile phase: [water (0.05%HCI)- ACN]; gradient: 0%-25% B over 11 min) to give the title compound (15 mg, 24.44 pmol, 7.55% yield, 96.21% purity, 2HCI) as a yellow solid. LCMS (ESI+): m/z 518.2. (M + l)+, Rt: 2.059 min. XH NMR (400 MHz, DMSO-d6+D2O) 6 9.20 - 8.70 (m, 2H), 7.91 - 7.71 (m, 1H), 7.53 - 7.27 (m, 2H), 3.95 - 3.69 (m, 2H), 3.67 - 3.45 (m, 3H), 3.44 - 3.18 (m, 5H), 3.16 - 2.96 (m, 3H), 2.77 (br d, J = 18.0 Hz, 5H), 2.18 - 1.95 (m, 3H), 1.82 - 1.55 (m, 3H).
Synthetic Route 20
Example 94: 4-(l-methyl-l,7-diazaspiro[4.4]nonan-7-yl)-8-oxo-N-(4- piperidyl )- 11-thia- l,3,5-triazatetracyclo[8.7.0.02,7.012, 17]heptadeca- 2, 4, 6, 9, 12(17), 13, 15-heptaene-9-carboxamide
tert-Butyl l-methyl-l,7-diazaspiro[4.4]nonane-7-carboxylate: To a solution of tert-butyl l,7-diazaspiro[4.4]nonane-7-carboxylate (1.5 g, 6.63 mmol, 1 eq} in DCM (15 mL) was added NaBH(OAc)3 (5.62 g, 26.51 mmol, 4 eq} and formaldehyde (1.08 g, 13.26 mmol, 986.91 pL, 37% purity, 2 eq}. The mixture was stirred at 25 °C for 2 hrs. The reaction mixture was quenched by the addition of saturated NaHCOs to pH = 7~8, and then extracted with DCM (3 x 50 mL). The combined organic layers were dried over Na2SC>4, filtered and concentrated under reduced pressure to give the title compound (1.3 g, 5.35 mmol, 80.79% yield, 100% purity) as a colorless oil which was directly used in the next step without purification. LCMS (ESI+): m/z 241.1 (M + H)+, Rt: 0.362 min.
1-Methyl- l,7-diazaspiro[4.4] nonane: To a solution of tert-butyl l-methyl-1,7- diazaspiro[4.4]nonane-7-carboxylate (1.3 g, 5.41 mmol, 1 eq} was added HCI/dioxane (2 N, 13 mL). The mixture was stirred at 25 °C for 2 hr. The reaction mixture was concentrated under reduced pressure to give the title compound (1 g, 4.60 mmol,
85.00% yield, 98.95% purity, 2HCI) as a grey solid which was used directly in the next step without purification. LCMS (ESI+): m/z 141. (M + H)+, Rt: 0.074 min.
Ethyl 4-(l-methyl-l,7-diazaspiro[4.4]nonan-7-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carboxylate: To a solution of ethyl 4-chloro-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9-carboxylate (500 mg, 1.39 mmol, 1 eq) in ACN (5 mL) was added DIEA (359.22 mg, 2.78 mmol, 484.12 pL, 2 eq) and l-methyl-l,7-diazaspiro[4.4]nonane (592.43 mg, 2.78 mmol, 2 eq, 2HCI). The mixture was stirred at 25 °C for 12 hrs. The reaction mixture was concentrated under reduced pressure and the crude product was triturated with ACN (10 mL) at 25 °C for 30 min to give the title compound (500 mg, 1.00 mmol, 72.18% yield, 93.94% purity) as a yellow solid. LCMS (ESI+): m/z 464.1. (M + H)+, Rt: 0.336 min.
tert-butyl 4-[[4-(l-methyl-l,7-diazaspiro[4.4]nonan-7-yl)-8-oxo-ll-thia- l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15- heptaene-9-carbonyl ]amino] piperidine- 1-carboxylate: To a solution of ethyl 4- (l-methyl-l,7-diazaspiro[4.4]nonan-7-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9-carboxylate (300 mg, 647.18 pmol, 1 eq) and tert-butyl 4-aminopiperidine-l-carboxylate (259.23 mg, 1.29 mmol, 2 eq) in DCM (3 mL) was added AICI3 (172.59 mg, 1.29 mmol, 70.73 pL, 2 eq) and DBU (295.57 mg, 1.94 mmol, 292.65 pL, 3 eq) at 0 °C. The mixture was stirred at 25 °C for 2 hrs. The reaction mixture was quenched by addition NH4CI (aq) (10 mL) at 25°C, and then extracted with DCM mL (3 x 10 mL). The combined organic layers were washed with saturated brine (3 x 5 mL), dried over Na2SC>4, filtered and concentrated under reduced pressure. The residue was purified by prep-HPLC (HCI
condition, column : CD24-XPT C18 150*25*7 pm; mobile phase: [water (0.05%HCI)- ACN]; gradient:23%-53% B over 10 min to give the title compound (90 mg, 145.69 pmol, 22.51% yield, 97.43% purity) as a white solid. LCMS (ESI+) : m/z 518.2. (M- 99)+, Rt: 0.278 min.
4-(l-methyl-l,7-diazaspiro[4.4]nonan-7-yl)-8-oxo-N-(4-piperidyl)-ll-thia- 1, 3, 5-triazatetracyclo [8.7.0.02, 7.012, 17] heptadeca-2,4,6,9, 12( 17), 13, 15- heptaene-9-carboxamide: A solution of tert-butyl 4-[[4-(l-methyl-l,7-diazaspiro- [4.4] nona n -7-yl)-8-oxo- 11-th ia- 1,3, 5-triazatetracyclo[8.7.0.02'7.012'17] heptadeca- 2,4,6,9, 12 (17), 13,15-heptaene-9-carbony I] amino] pi peridi ne-1 -carboxy late (90 mg, 145.69 pmol, 1 eq) in HCI/dioxane (2 N, 1 mL) was stirred at 25 °C for 2 hrs. The reaction mixture was concentrated under reduced pressure to remove solvent. The crude product was triturated with ACN (2 mL) at 25 °C for 30 min to give the title compound (35 mg, 62.35 pmol, 42.80% yield, 98.71% purity, HCI salt) as a yellow solid. LCMS (ESI+) : m/z 518.2. (M + l)+, Rt: 2.003 min. XH NMR (400 MHz, D2O) 6 8.36 (br s, 1H), 7.72 (br s, 1H), 7.41 - 7.23 (m, 1H), 7.09 (br t, J = 6.6 Hz, 1H), 6.99 - 6.74 (m, 1H), 3.94 - 3.52 (m, 4H), 3.48 - 3.31 (m, 3H), 3.14 (br t, J = 10.9 Hz, 4H), 2.90 (br s, 3H), 2.50 - 2.04 (m, 8H), 1.70 (br s, 2H)
Synthetic Route 21
Example 95: 2-(2-Methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-
4,6-Dichloropyridine-3-carbonyl chloride: To 4,6-dichloropyridine-3-carboxylic acid (10 g, 52.0 mmol, 1 eq) was added SOCI2 (100 mL). The mixture was stirred at 65°C for 12 hrs. The mixture was concentrated under reduced pressure to give the
title compound (10 g, 46.4 mmol, 89.4% yield, 98% purity) as a yellow solid which was used directly in the next step without purification. LCMS (ESI+): m/z 206.0 (M- 4)+, Rt: 1.313 min.
Ethyl 2-chloro-5-oxo-[ l,3]benzothiazolo[3,2-a] [ l,6]naphthyridine-6- carboxylate: To a solution of ethyl 2-(l,3-benzothiazol-2-yl)acetate (5 g, 22.6 mmol, 1 eq) and MgCH (3.23 g, 33.8 mmol, 1.39 mL, 1.5 eq) in ACN (50 mL) was added 4,6- dichloropyridine-3-carbonyl chloride (6.18 g, 29.3 mmol, 1.3 eq) and TEA (9.14 g, 90.2 mmol, 4 eq) slowly at -10°C. The mixture was stirred at 80 °C for 12 hrs. The mixture was concentrated under reduced pressure and the crude product was triturated with water (50 mL) and then ACN (50 mL) at 25°C for 2 hrs to give the title compound (8 g, 19.8 mmol, 87.7% yield, 98% purity) as a light yellow solid. LCMS (ESI+): m/z 359.0 (M + H)+, Rt: 0.394 min. XH NMR (400 MHz, DMSO-c/6) 6 9.30 - 9.16 (m, 1H), 8.59 - 8.43 (m, 2H), 8.14 (br d, J = 8.0 Hz, 1H), 7.72 - 7.48 (m, 2H), 4.35 (q, J = 7.1 Hz, 2H), 1.33 (br t, J = 7.1 Hz, 3H).
tert-Butyl 4-[(2-chloro-5-oxo-[ l,3]benzothiazolo[3,2-a] [ l,6]naphthyridine- 6-carbonyl)amino] piperidine- 1-carboxylate: To a solution of ethyl 2-chloro-5- oxo-[l,3]benzothiazolo[3,2-a][l,6]naphthyridine-6-carboxylate (300 mg, 836.12 pmol, 1 eq) and tert-butyl 4-aminopiperidine-l-carboxylate (251.18 mg, 1.25 mmol, 1.5 eq) in DCM (6 mL) was added DBU (381.86 mg, 2.51 mmol, 378.08 pL, 3 eq) and AlCh (178.38 mg, 1.34 mmol, 73.11 pL, 1.6 eq) at 0°C. The mixture was stirred at 25°C for 5min. The reaction mixture was quenched by addition NH4CI (aq) 50 mL at 25°C, and then extracted with DCM mL (3 x 5 mL). The combined organic layers were washed with saturated brine (3 x 2 mL), dried over Na2SC>4, filtered and concentrated under reduced pressure. The crude product was triturated with MeCN at 25°C for 15
min and collected by filtration to give the title compound (198 mg, 385.96 pmol, 46.16% yield) as a yellow solid. LCMS (ESI+) : m/z 513.1 (M + H)+, Rt: 0.630 min.
tert-Butyl 4-[[2-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5- yl)-5-oxo-[ 1,3] benzothiazolo[3,2-a][ 1,6] naphthyridine-6-carbonyl] amino] - piperidine-l-carboxylate: To a solution of tert-butyl 4-[(2-chloro-5-oxo-[l,3]- benzothiazolo[3,2-a] [l,6]naphthyridine-6-carbonyl)amino] piperidine-l-carboxylate (177 mg, 345.02 pmol, 1 eq) in MeCN (5 mL) was added DIEA (133.78 mg, 1.04 mmol, 180.29 pL, 3 eq) and 5-methyl-2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]- pyrrole (52.25 mg, 414.03 pmol, 1.2 eq). The mixture was stirred at 80°C for 12 h. The reaction mixture was concentrated under reduced pressure to remove solvent. The crude product was triturated with MeCN at 25°C for 15 min to give the title compound (157 mg, 260.47 pmol, 75.49% yield) as a yellow solid. LCMS (ESI+) : m/z 603.6 (M + H)+, Rt: 0.465 min.
2-(2-Methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-5-oxo-N-(4- piperidyl)-[ l,3]benzothiazolo[3,2-a] [ l,6]naphthyridine-6-carboxamide: A solution of tert-butyl 4-[[2-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5- yl)-5-oxo-[ 1,3] benzothiazolo[3,2-a] [ 1,6] naphthyridine-6-carbonyl]amino] piperidine- l-carboxylate (156 mg, 258.82 pmol, 1 eq) in HCI (2 mL) was stirred at 25°C for 1 h. The reaction mixture was concentrated under reduced pressure and the residue was purified by prep-HPLC (HCI condition : column : CD24-WePure Biotech XPT C18 150*25*7pm; mobile phase: [H2O (0.05%HCI)-ACN];gradient: 0%-27% B over 10.0 min) to give the title compound (50.3 mg, 87.07 pmol, 33.64% yield, 99.63% purity, 2HCI) as a yellow solid. LCMS (ESI+) : m/z 503.2 (M + H)+, Rt: 1.844 min. XH NMR (400 MHz, DMSO-de + D2O) 6 = 9.06 (s, 1H), 8.42 (d, J = 8.4 Hz, 1H), 8.01 (d, J = 7.8 Hz, 1H), 7.71 - 7.41 (m, 2H), 7.14 (br d, J = 9.1 Hz, 1H), 4.12 - 4.00 (m, 2H),
3.88 - 3.78 (m, 2H), 3.71 - 3.56 (m, 3H), 3.44 - 3.14 (m, 5H), 3.10 - 2.91 (m, 3H), 2.83 (br d, J = 12.3 Hz, 3H), 2.20 - 1.99 (m, 2H), 1.78 - 1.57 (m, 2H).
Synthetic Route 22
Example 96: N-(2-((2-aminoethyl)disulfaneyl)ethyl)-2-(5-methyl- hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo- [3',2' : l,6]pyrido[ 2,3-d] pyrimidine-6-carboxamide
To a solution of ethyl 2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H- benzo[4',5']thiazolo[3',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (500 mg, 1.11 mmol, 1 eq} in DCM (5 mL) was added 2-aminoethanethiol (858.11 mg, 11.12 mmol, 10 eq}, DBU (508.00 mg, 3.34 mmol, 502.97 pL, 3 eq} and AICI3 (222.47 mg, 1.67 mmol, 91.18 pL, 1.6 eq} at 0°C under N2. The mixture was stirred at 25°C for 2 h. The reaction was quenched by addition of 15 mL of 15% of NaOH (sat aq) and the aqueous phase was extracted with DCM (3 x 5 mL). The combined organic phases were washed with saturated brine (10 mL), dried over anhydrous Na2SC>4 and concentrated in vacuo. The residue was purified by prep-HPLC (column : Phenomenex Luna C18 100*30mm*5pm;mobile phase: [H2O(0.1% TFA)-ACN];gradient:5%-40% B over 8.0 min) to give the title compound (180 mg, 323.89 pmol, 29.12% yield) as a yellow solid. LCMS (ESI+): m/z 556.2 (M + H)+, Rt: 0.337 min.
Example 97: /V-(2-Mercaptoethyl)-2-(5-methylhexahydropyrrolo[3,4-c]- pyrrol-2(lH)-yl)-5-oxo-5H-benzo [4,,5']thiazolo[3,,2': l,6]pyrido[2,3-d]- pyrimidine-6-carboxamide
To a solution of N-(2-((2-aminoethyl)disulfaneyl)ethyl)-2-(5-methylhexahydropyrrolo- [3,4-c]pyrrol-2(lH)-yl)-5-oxo-5H-benzo[4',5']thiazolo[3',2': l,6]-pyrido[2,3-d]- pyrimidine-6-carboxamide (80 mg, 143.95 pmol, 1 eq} in THF (1 mL) and H2O (0.03 mL) was added tributylphosphane (58.25 mg, 287.91 pmol, 71.03 pL, 2 eq} at 0°C.
The mixture was stirred at 25°C for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (column: Phenomenex luna C18 100*40mm*5 um;mobile phase: [H2O(0.1% TFA)-ACN];gradient: 15%-40% B over 10.0 min) to give the title compound (8 mg, 16.20 pmol, 11.25% yield, 97.32% purity) as a white solid. LCMS (ESI+): m/z 481.0 (M + H)+, Rt: 1.509 min. XH NMR (400 MHz, DMSO-d6+D2O) 6 = 10.26 (br s, 1H), 9.03 - 8.78 (m, 2H), 7.80 - 7.61 (m, 1H), 7.46 - 7.23 (m, 2H), 3.96 - 3.75 (m, 3H), 3.59 - 3.48 (m, 4H), 3.44 - 3.14 (m, 4H), 3.10 - 2.93 (m, 3H), 2.85 (br s, 3H).
Synthetic Route 23
Example 98: 7-methyl-2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)- 5-oxo-N-(piperidin-4-yl)-5,7-dihydrobenzo[4',5']imidazo[l,,2,: l,6]pyrido- [2,3-d] pyrimidine-6-carboxamide
Ethyl 2-chloro-7-methyl-5-oxo-5,7-dihydrobenzo[4',5']imidazo[ l,,2,:l,6] pyrido[ 2,3-d] pyrimidine-6-carboxylate : To a solution of ethyl 2-chloro-5-oxo-5,7- dihydrobenzo[4',5']imidazo[l',2' : l,6]pyrido [2,3-d]pyrimidine-6-carboxylate (2 g, 5.84 mmol, 1 eq) in DMF (20 mL) was added DIEA (2.26 g, 17.51 mmol, 3.05 mL, 3 eq) and Mel (2.48 g, 17.51 mmol, 1.09 mL, 3 eq) at 0°C under N2. The reaction was heated to 40°C and stirred for 12 h. After cooling to 25°C, the reaction was quenched with NH4CI (aq, 20 mL) and the solid collected by filtration. The crude product was triturated with ACN (15 mL) for 10 min and collected by filtration to give the title compound (1 g, 2.80 mmol, 48.03% yield) as a yellow solid. LCMS (ESI+): m/z 357.0 (M + H)+, Rt: 1.459 min.
Ethyl 7-methyl-2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-
5,7-dihydrobenzo[4',5']imidazo[ l',2':l,6]pyrido[2,3-d]pyrimidine-6-
carboxylate: To a solution of ethyl 2-chloro-7-methyl-5-oxo-5,7-dihydrobenzo[4',5']- imidazo[l',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (1 g, 2.80 mmol, 1 eq) in ACN (10 mL) was added 5-methyl-2,3,3a,4,6,6a-hexahydro-lH-pyrrolo[3,4-c]pyrrole (424.48 mg, 3.36 mmol, 1.2 eq) and DIEA (1.09 g, 8.41 mmol, 1.46 mL, 3 eq) at 25°C. The reaction was stirred at 25°C for 12 h. The reaction was filtered and the filter cake was collected. The crude product was triturated with ACN (15 mL) for 10 min and the solid collected by filtration to give the title compound (1 g, 2.24 mmol, 79.90% yield) as a yellow solid. LCMS (ESI+) : m/z 447.2 (M + H)+, Rt: 0.359 min.
tert-Butyl 4-(7-methyl-2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)- 5-oxo-5,7-dihydrobenzo[4',5']imidazo[ l',2': l,6]pyrido[2,3-d]pyrimidine-6- carboxamido)piperidine- 1-carboxylate: To a solution of ethyl 7-methyl-2-(5- methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo[4',5']- imidazo[l',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxylate (300 mg, 671.89 pmol, 1 eq) in DCM (3 mL) was added tert-butyl 4-aminopiperidine-l-carboxylate (161.48 mg, 806.27 pmol, 1.2 eq), DBU (306.87 mg, 2.02 mmol, 303.83 pL, 3 eq) and AICI3 (143.34 mg, 1.08 mmol, 58.75 pL, 1.6 eq) at 0°C under N2. The reaction was warmed to 25 °C and stirred for 12 h. The reaction was quenched with 15% NaOH (aq, 3 mL), extracted with DCM (3 x 3 mL), washed with saturated brine solution (2 x 3 mL), dried over anhydrous sodium sulfate and concentrated in vacuo. The crude product was triturated with ACN (3 mL) for 10 min and the solid collected by filtration to give the title compound (200 mg, 332.94 pmol, 49.55% yield) as a yellow solid. LCMS (ESI+) : m/z 601.4(M + H)+, Rt: 0.410 min.
7-methyl-2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N- (piperidin-4-yl)-5,7-dihydrobenzo[4',5']imidazo[ l',2' : l,6]pyrido[2,3-d]- pyrimidine-6-carboxamide: A solution of tert-butyl 4-(7-methyl-2-(5-methyl- hexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-5,7-dihydrobenzo[4',5']-imidazo- [ l',2' : l,6]pyrido[2,3-d]pyrimidine-6-carboxamido)piperidine-l-carboxylate (190 mg, 316.29 pmol, 1 eq) in HCI/dioxane (2 mL) was stirred at 25°C for 2 h. The reaction
was concentrated in vacuo and the crude product was purified by prep-HPLC (column: Phenomenex luna C18 100*40mm*5 pm;mobile phase: [H20(0.04% HCI)-ACN]; gradient: l%-35% B over 8.0 min) to give the title compound (87.5 mg, 162.93 pmol, 51.51% yield, HCI) as a yellow solid. LCMS (ESI+): m/z 501.4 (M + H)+, Rt: 1.159 min. XH NMR (400 MHz, DMSO+D2O-d6) 6 = 9.07 - 8.88 (m, 1H), 8.64 - 8.36 (m, 1H), 7.52 - 7.28 (m, 3H), 4.12 - 4.00 (m, 1H), 3.94 - 3.79 (m, 5H), 3.55 (s, 1H), 3.48 (br s, 2H), 3.45 - 3.26 (m, 5H), 3.25 - 3.16 (m, 1H), 3.15 - 2.99 (m, 3H), 2.89 (s, 3H), 2.07 (br d, J = 1.3 Hz, 2H), 1.78 - 1.63 (m, 2H).
Examples - Antibody-Drug Conjugate Synthesis
General experimental
All reagents were purchased from Aldrich, MedChemExpress or ChemCruz and were used as received. All reactions were monitored by Liquid chromatography - mass spectrometry (LC-MS) on a Waters Xevo G2-S QToF. Flash chromatographic purifications were carried out using CombiFlash Rf (Teledyne Isco) with a Interchim column (PF-15C18HP-F0025), with H2O-Acetonitrile gradient. XH NMR spectra were recorded at ambient temperature using an internal deuterium lock on Bruker DPX (400 MHz; XH DUL probe) and Bruker Avance III HD (400 MHz; Smart probe). Excess solvents were removed either by rotary evaporation on Buchi Rotavapor R-114 or Genevac EZ-2 Elite.
Bioconjugation
Small molecules, drugs and fluorophores were removed from antibodies/bioconjugates via Zeba™ Spin Desalting Columns and Plates, 7K and 40K MWCO, 0.5 mL-5 mL, unless otherwise stated. Equivalents of drugs added to antibodies/bioconjugates are reported as 1: 1 antibody :drug (/.e. not accounting number of available cysteine residues for reaction). UV-vis spectra were recorded over a range of 220 - 650 nm on a Thermo Scientific™ NanoDrop™ One Microvolume UV-vis spectrophotometer and was used to determine concentration of bioconjugates, and FAR (Fluorophore-to- Antibody Ratio). Sample buffer was used as blank for baseline correction. Final ADC formulations were stored in PBS, pH 7.4, at 4°C. The estimated concentration of Cetuximab conjugates was determined spectrophotometrically at 280 nm by using a molar extinction coefficient, e, of 210.000 M 'em -1. Correction factor (CF) for small molecules was calculated. Determination of molecule over antibody ratio, r, follows the formula below:
SDS-PAGE gels
SDS-PAGE was carried out on pre-cast Bio-Rad 4-15 % GTX mini-Protean acrylamide gels run over 40 min at fixed current of 40 mA. Gels were either visualised under UV light in a SynGeneO G: BOX (e.g. for visualisation of fluorescent species). Alternatively, this gels were washed in H2O and stained in InstantBlueO Gel Stain for 1 h and visualised under white light. Samples (7 pL at ~5 pM construct) were mixed with 6x loading buffer (3 pL) and heated at 75 °C for 4 min.
Ellman's assay
The Ellman's assay involved combining 2 pL of a 1 mM solution of 5,5'-d ith io-bis-(2- nitrobenzoicacid) (Ellman's reagent) in PBS with a bioconjugate sample at a known concentration, in PBS (8 pL). After incubating the solution at 21 °C for 2 minutes, the absorption was recorded at both 280 nm (to determine protein concentration) and 412 nm (for 2-nitro-5-thiobenzoic acid). A reference blank was created using a 1 mM solution of Ellman's reagent in PBS (1 pL), diluted in PBS (4 pL) to serve as a baseline correction. Each sample in PBS was analysed with and without Ellman's reagent, both under identical concentration conditions. The sulfhydryl per protein ratio (SPR) was calculated as follows with £412 = 14150 M 1 cm :
Protein LC-MS
Antibodies and their respective conjugates were prepared for analysis by removal of small molecules + buffer exchange into miliQ H2O on ZebaSpin™ columns, and were submitted with a concentration of 10-15 pM (1.0 mgxml'1) for analysis on the Xevo QTOF LC-MS system. 4-10 pL of each sample was injected and separation was achieved using mobile phase A (95% water, 5% MeCN, 0.1% formic acid) and B (5% water, 95% MeCN, 0.1% formic acid) using a gradient elution. Typical conditions were capillary voltage 1.6-2.2 kV, cone voltage 160- 190 V, Trap 40-50 V, Transfer 140 V with backing pressure 3-4 mbar and source temperature of 20 °C. Data acquisition and processing were performed using MassLynx 4.1. The raw data was converted to zero charge mass spectra using a maximum entropy deconvolution algorithm, over the full peak regions as identified via the LC trace. All full antibody samples were deglycosylated with PNGase F enzyme treatment prior to LC-MS analysis. A 2-step protocol was utilised for Cetuximab antibody and respective conjugates to efficiently remove Fab and Fc region N-glycans.
ADC Synthetic Route 1
Example ADC-1: Cetuximab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl-l,4- diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9, 12,14,16-heptaene-9-carboxamide
To a solution of Azido-PEG3-Val-Cit-PAB-PNP (20 mg, 0.026 mmol) in DMF (5 ml_), N- (2-aminoethyl)-4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide (0.028 mmol 1 eq.) and DIPEA (0.028 mmol, 1.1 eq.) were added, under inert atmosphere (argon) and the reaction was stirred at 21 °C for 16 h. After consumption of starting material, solvents were removed in vacuo and crude product was purified via RP flash chromatography to yield intermediate 1. LCMS (ESI+): m/z 1087 (M + H) +, Rt: 2.14 min.
To a solution of native Cetuximab (CTX) (500 pL, 20 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added TCEP (10 pL, 20 mM in PBS pH = 7.4, 20 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by repeated diafiltration (5x) into fresh buffer using VivaSpin sample concentrators (GE Healthcare, 30,000 MWCO). Analysis by SDS-PAGE, LC-MS and UV-
Vis revealed >95% conversion to reduced CTX which was used as is in the next step. Observed mass (deglycosylated): LC = 23425 Da, HC = 46851 Da.
To a solution of reduced CTX (3000 pL, 22 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added BCN-PEG3-Mal (endo) (80 pL, 20 mM in PBS pH = 7.4, 24 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE, LC-MS and UV/Vis (Ellman's assay) revealed >90% conversion to CTX-mal-BCN. Calculated SPR~0.
To a solution of CTX-mal-PEG3-BCN (500 pL, 20 pM, 1 eq.) in PBS (pH 7.4) was added Intermediate 1 (10 pL, 20 mM in PBS pH = 7.4, 20 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC ZebaspinTM column, and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE, UV/Vis and LC-MS revealed >90% conversion to afford the title compound (Example ADC-1), DAR > 6. Expected mass: LC = 25032 Da (LC + Id), HC = 51669 Da (HC + 3d), (calculated from reduced CTX LC/MS) Observed mass: LC = 25032 Da (LC + Id) , HC = 50063 (LC + 2d) Da.
Example ADC-2: Cetuximab-mal-PEG6-vc-4-(4-methyl-l,4-diazepan-l-yl)-8- oxo-N-[(pyrrolidin-2-yl)methyl]-ll-thia-l,3,5-triazatetracyclo- [8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9-carboxamide
Example ADC-2 was synthesised according to the method outlined in ADC Synthetic Route 1 using 4-(4-methyl-l,4-diazepan-l-yl)-8-oxo-N-[(pyrrolidin-2-yl)methyl]-ll- thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]heptadeca-2,4,6,9,12,14,16-heptaene-9- carboxamide. Analysis by SDS-PAGE, UV/Vis and LC/MS revealed >90% conversion, DAR > 6. Expected mass: LC = 25072 Da (LC + Id), HC = 51789 Da (HC + 3d), observed mass for lightest peaks only: LC = 25072 Da (LC + Id) , HC = 50341 (LC + ~2d) Da.
Example ADC-3: Trastuzumab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl- l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9, 12,14,16-heptaene-9-carboxamide
To a solution of native Trastuzumab (TRAZ) (500 pL, 20 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added TCEP (10 pL, 20 mM in PBS pH = 7.4, 20 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by repeated diafiltration (5x) into fresh buffer using VivaSpin sample concentrators (GE Healthcare, 30,000 MWCO). After this, to reduced TRAZ (300 pL, 22 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4), was added BCN-PEG3-Mal (endo) (8 pL, 20 mM in PBS pH = 7.4, 24 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4, to yield TRAZ-mal-BCN. TRAZ- mal-PEG3-BCN (50 pL, 20 pM, 1 eq.) was conjugated with Alexa Fluor™ 488 azide (1 pL, 20 mM in DMSO, 20 eq.) to generate TRAZ-mal-488, to confirm presence and reactivity of strained alkyne handles. Excess fluorophore was removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4. Fluorescent conjugate SDS-PAGE was visualised under UV light and FAR analysed via UV/Vis. Calculated FAR = 6.6.
Following this, to a solution of TRAZ-mal-PEG3-BCN (200 pL, 20 pM, 1 eq.) was added Intermediate 1 (12 pL, 20 mM in PBS pH = 7.4, 20 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE and UV/Vis revealed >95% conversion to give the title compound, DAR > 6. Expected mass: LC = 25044 Da (LC + Id), HC = 53977 Da (HC + 3d), (calculated from SCT MW) Observed mass: LC = 25048 Da (LC + Id) Da, HC = 53980 Da (HC + 2d).
Example ADC-4: Sacituzumab-mal-PEG6-vc-N-(2-aminoethyl)-4-(4-methyl- l,4-diazepan-l-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02,7.012,17]- heptadeca-2,4,6,9, 12,14,16-heptaene-9-carboxamide
To a solution of native Sacituzumab (SCT) (500 pL, 20 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added TCEP (10 pL, 20 mM in PBS pH = 7.4, 20 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by repeated diafiltration (5x) into fresh buffer using VivaSpin sample concentrators (GE Healthcare, 30,000 MWCO). After this, to reduced SCT (300 pL, 22 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4), was added BCN-PEG3-Mal (endo) (8 pL, 20 mM in PBS pH = 7.4, 24 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4, to yield SCT-mal-PEG3-BCN. SCT-mal-PEG3-BCN (50 pL, 20 pM, 1 eq.) was conjugated with Alexa Fluor™ 488 azide (1 pL, 20 mM in DMSO, 20 eq.) to confirm presence and reactivity of strained alkyne handles. Excess fluorophore was removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4. Fluorescent conjugate was visualised under UV light and FAR analysed via UV/Vis. Calculated FAR = 6.0.
Following this, to a solution of SCT-mal-PEG3-BCN (200 pL, 20 pM, 1 eq.) was added Intermediate 1 (12 pL, 20 mM in PBS pH = 7.4, 20 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE, UV/Vis revealed >95% conversion to afford the title compound, DAR > 6. Expected mass: LC = 24946 Da (LC + Id), HC = 50501 Da (HC + 3d). Observed mass: LC = 24944 (LC + Id) Da, HC = 48894 Da (HC + 2d).
ADC Synthetic Route 2
Example ADC-5: Cetuximab-mal-PEG6-vc-4-(2-methyl-l,3,3a,4,6,6a- hexahydropy rrolo[ 3, 4-c]pyrrol-5-y l)-8-oxo-N-py rrolidin-3-yl- 1,3,5,11-
tetrazatetracyclo [8.7.0.02, 7.012, 17] heptadeca- 2, 4, 6, 9, 12(17), 13, 15- heptaene-9-carboxamide
To a solution of Azido-PEG3-Val-Cit-PAB-PNP (20 mg, 0.026 mmol) in DMF (5 ml_), 4- (2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-N-pyrrolidin-3-yl- l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene- 9-carboxamide (0.028 mmol.l eq.) and DIPEA (0.028 mmol, 1.1 eq.) were added under inert atmosphere (argon) and the reaction was stirred at 21°C for 16 h. After consumption of starting material, the solvents were removed in vacuo and the crude product was purified via RP flash chromatography (5-90% MeCN : H2O) to yield intermediate 2. LCMS (ESI+): m/z 1107 Da (M + H)+, Rt: 2.37 min.
To a solution of native Cetuximab (CTX) (800 pL, 28 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added TCEP (112 pL, 20 mM in PBS pH = 7.4, 100 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by repeated diafiltration (5x) into fresh buffer using VivaSpin sample concentrators (GE Healthcare, 30,000 MWCO). Following this, analysis by SDS-PAGE and UV-Vis revealed >95% conversion to reduced CTX.
To a solution of reduced CTX (700 pL, 28 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added BCN-PEG3-Mal (endo) (98 pL, 20 mM in phosphate-buffered saline (PBS) pH = 7.4, 100 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by repeated diafiltration (5x) into fresh buffer using VivaSpin sample concentrators (GE Healthcare, 30,000 MWCO) and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS- PAGE and UV/Vis revealed >90% conversion to CTX-mal-PEG3-BCN.
To a solution of CTX-mal-PEG3-BCN (200 pL, 20 pM, 1 eq.) in PBS (pH 7.4) was added intermediate 2 (17 pL, 10 mM in PBS pH = 7.4, 40 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC Zebaspin™ column, and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE and UV/Vis revealed >90% conversion to give the title compound (Example ADC-5) with estimated DAR=6.8.
Example ADC-6: Cetuximab-mal-PEG6-vc-4-(2-methyl-l,3,3a,4,6,6a- hexahydropyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-N-(4-piperidyl)-l,3,5,ll- tetrazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene- 9-carboxamide
Example ADC-6 was synthesised according to the method outlined in ADC Synthetic
Route 2 using 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-
N-(4-piperidyl)-l,3,5,ll-tetrazatetracyclo[8.7.0.02'7.012'17]heptadeca-
2,4,6,9,12(17),13,15-heptaene-9-carboxamide. Analysis by SDS-PAGE and UV/Vis revealed >90% conversion to the title compound with an estimated DAR=6.8.
Example ADC-7: Cetuximab-mal-PEG6-vc-N-(2-aminoethyl)-4-(2-methyl- l,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-ll-thia-l,3,5- triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carboxamide
Example ADC-7 was synthesised according to the method outlined in ADC Synthetic Route 2 using N-(2-aminoethyl)-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4- c]pyrrol-5-yl)-8-oxo-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca-
2,4/6,9,12(17),13,15-heptaene-9-carboxamide. Analysis by SDS-PAGE and UV/Vis revealed >90% conversion to the title compound with an estimated DAR=6.8.
Example ADC-8: Cetuximab-mal-PEG6-vc-4-(2-methyl-l,3,3a,4,6,6a- hexahydropyrrolo[3,4-c]pyrrol-5-yl)-8-oxo-N-(4-piperidyl)-ll-thia-l,3,5- triazatetracyclo[8.7.0.02'7.012'17]heptadeca-2,4,6,9,12(17),13,15-heptaene-9- carboxamide
Example ADC-8 was synthesised according to the method outlined in ADC Synthetic
Route 2 using 4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo[3,4_c]pyrrol-5-yl)-8-oxo-
N-(4-piperidyl)-ll-thia-l,3,5-triazatetracyclo[8.7.0.02'7.012'17]heptadeca-
2,4/6,9,12(17),13,15-heptaene-9-carboxamide. Analysis by SDS-PAGE and UV/Vis revealed >90% conversion to the title compound with an estimated DAR=6.8.
ADC Synthetic Route 3
Example ADC-9: Amivantamab-mal-PEG8-vc-4-2-(5-methylhexahydropyrrolo- [3,4-c]pyrrol-2(lH)-yl)-5-oxo-N-(pyrrolidin-2-ylmethyl)-5H-benzo[4',5']- thiazolo[3',2': l,6]pyrido[2,3-d]-pyrimidine-6-carboxamide
To a solution of Azido-PEG3-Val-Cit-PAB-PNP (20 mg, 0.026 mmol) in DMF (5 mL) was added 2-(5-methylhexahydropyrrolo[3,4-c]pyrrol-2(lH)-yl)-5-oxo-N-(pyrrolidin-2- ylmethyl)-5H-benzo[4',5']thiazolo[3',2': l,6]pyrido[2,3-d]-pyrimidine-6-carboxamide (0.028 mmol 1 eq.) and DIPEA (0.028 mmol, 1.1 eq.) under inert atmosphere (argon) and the reaction was stirred at 21 °C for 16 h. After consumption of starting material, solvents were removed in vacuo and the crude product was purified via reversed- phase flash chromatography to yield intermediate 3. LCMS (ESI+): m/z 1139.41 (M + H)+, Rt: 2.46 min.
To a solution of reduced Amivantamab (700 pL, 28 pM, 1 eq.) in PBS EDTA (0.5 mm EDTA, pH 7.4) was added BCN-PEG5-Mal (endo) (78 pL, 20 mM in PBS, pH = 7.4, 80 eq.) and the reaction mixture was incubated at 21 °C for 16 h. The excess reagents were then removed by repeated diafiltration (5x) into fresh buffer using VivaSpin sample concentrators (GE Healthcare, 30,000 MWCO) and, simultaneously, buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE and UV/Vis revealed >90% conversion to Amivantamab-Mal-PEG5-BCN.
To a solution of Amivantamab-Mal-PEG5-BCN (200 pL, 20 pM, 1 eq.) in PBS (pH 7.4) was added intermediate 3 (17 pL, 10 mM in PBS pH = 7.4, 40 eq.) and the reaction mixture incubated at 21 °C for 16 h. The excess reagents were then removed by SEC ZebaspinTM column, and simultaneously buffer was exchanged to PBS, pH 7.4. Following this, analysis by SDS-PAGE and UV/Vis revealed >90% conversion to the title compound. Estimated DAR=7.
Example ADC- 10: Cetuximab-mal-PEG8-vc-N-(aminomethyl)-4-(2-methyl- l,3,3a,4,6,6a-hexahydropyrrolo-[3,4-c]pyrrol-5-yl)-8-oxo-l,3,5,ll- tetrazatetracyclo[8.7.0.02,7.012, 17]-heptadeca-2,4,6,9,12( 17), 13, 15- heptaene-9-carboxamide
Example ADC-10 was synthesised according to the method outlined in ADC Synthetic Route 3 using N-(aminomethyl)-4-(2-methyl-l,3,3a,4,6,6a-hexahydropyrrolo-[3,4_ c]pyrrol-5-yl)-8-oxo-l,3,5,ll-tetrazatetracyclo[8.7.0.02,7.012,17]-heptadeca- 2,4/6,9,12(17),13,15-heptaene-9-carboxamide. Analysis by SDS-PAGE and UV/Vis revealed >90% conversion to the title compound. Estimated DAR=7.
Example ADC- 11: Cetuximab-mal-PEG8-vc-2-(4-methyl-l,4-diazepan-l-yl)-5- oxo-N-(piperidin-4-yl)-5,7-dihydrobenzo[4',5']imidazo[ l,,2,:l,6]pyrido[2,3- d]pyrimidine-6-carboxamide
Example ADC-11 was synthesised according to the method outlined in ADC Synthetic Route 3 using 2-(4-methyl-l,4’diazepan-l-yl)-5-oxo-N-(piperidin-4-yl)-5,7- dihydrobenzo[4',5']imidazo[l',2': l,6]pyrido[2,3-d]pyrimidine-6-carboxamide. Analysis by SDS-PAGE and UV/Vis revealed >90% conversion to IFX-769, Estimated DAR=7.
Examples - Biological Activity
Cell culture studies
The antiproliferative effects of the present compounds and ADCs may be tested using a cell viability assay following protocols described below.
Cell culture. Human colorectal adenocarcinoma HCT116 cells (CCL-247, ATCC), HCT116 BRCA2 /_ knockout cells (clone 42, Cancer Research UK) as well as colorectal adenocarcinoma DLD-1 cells (CCL-221, Horizon Discovery) and DLD-1 BRCA2 /_ knockout cells (HD 105-007, Horizon Discovery) were cultured in RPMI1640, GlutaMAX™ (Gibco) supplemented with 10% heat inactivated fetal bovine serum (ThermoFisher Scientific) at 37 °C in a humidified 5% CO2 atmosphere.
Cell Titer Gio assays. Antiproliferative effects of compound and ADCs were tested using a CellTiter-Glo® 2.0 cell viability assay (Promega), which determines the number of viable cells in culture by quantifying ATP of metabolically active cells. Cells (500/well) were seeded on 384-well flat bottom plates in 25pL of culture medium containing compounds or ADCs a various concentrations. After incubation for 96 hours under normal growth condition, 25 pL of Cell Titer Gio reagent were added to each well, mixed and incubated for 10 min. End-point luminescence was then measured using a PHERAstar Plus (BMG Labtech) and normalized in relation to the average survival of samples treated only with DMSO (100% viability) and wells with no cells added (0% viability). Dose-dependent cell viability was fit using a four-parameter logistic curve in CDD Vault (Collaborative Drug). The 50% inhibitory concentrations (IC50) were determined from three replicates.
FRET DNA melting assays were performed as previously described (DECIAN et al., 2007) using 100 nM oligonucleotides and 1 pM compounds. Dual-labelled DNA oligonucleotides (Sigma-Aldrich) had the donor fluorophore 6-carboxyfluorescein (FAM) and acceptor fluorophore 6-carboxytetramethylrhodamine (TAMRA).
G4 hTelo: [FAM]GGGTTAGGGTTAGGGTTAGGG[TAMRA]
FRET probes were dissolved as a 100 pM stock in nuclease-free water and diluted to 200 nM (2x final concentration) in assay buffer (Li cacodylate 10 mM, pH 7.4, KCI 10 mM, and LiCI 90 mM) and then annealed by heating to 95 °C for 5 min, followed by gradually cooling to 20 °C. Compounds were prepared as 10 mM stock solutions in DMSO and diluted to 2 pM (2x concentration) in assay buffer (Li cacodylate 10 mM, pH 7.4, KCI 10 mM, and LiCI 90 mM).
Next, 15 pL of annealed oligonucleotides were mixed with 15 pL compound solution in 384-well plates (Bio-Rad, HSP3805), sealed and gently shaken for lOmin. The FAM signal was recorded using a CFX Opus 384 Real-Time PCR System (Bio-Rad).
Fluorescence readings were taken at intervals of 0.5 °C in the range 25-95 °C, with a constant temperature being maintained for 10 s prior to each reading. Melting temperatures were determined using CFX Maestro (Bio-Rad) as the first derivative of the relative fluorescence over time. Relative stabilisation (ATm) was calculated compared to a control as mean of four replicates.
BALB/3T3 clone A31 Phototoxicity Assay
Day 0: Once the cells become >70% confluent in the flask (approx. 3 days), the media will be aspirated and the cell monolayers will be rinsed with 10 mL DPBS. After aspirating the rinse buffer, trypsin will be added to cover the cell monolayer, tilting once or twice. Cell media will be added and pipetted up and down several times to mix and dissociate cell clumps until cells will be separated. Cells will be counted, and 150000 cells/mL of suspension will be prepared. Assay plates will be seeded with BALB/3T3 clone A31 cells in DMEM media, 15000 cells/well in the 96-well plate, 100 pL/well. Incubate the cells overnight at 37 °C, 10% CO2, relative humidity >90%.
Day 1:
1) After allowing for cell attachment overnight, wash the cell with 100 pL HBSS once and is replaced with HBSS.
2) Set the Pico8 digital dispenser to add the test and control articles to the cell assay plates. The top concentration of the working concentration of test article will be started from 100 pM, 3-fold dilution, 8 concentrations. The control article Chlorpromazine will be started from 100 pM, 3-fold dilution, 8 concentrations. The solubility of the compounds and cell status will be observed after the compounds were added into the cell media.
3) The plate 1 and 2 will be incubated in the RT for lh. Then the plate 2 will be incubated in the dark for lh. Meanwhile plate 1 will be exposed to about 2.4 J/cm2 of UVA irradiation for 40min. After that the test solution will be removed from the plates; the wells will be washed with 150 pL HBSS once and replaced the fresh culture medium. Incubate the cells overnight at 37 °C, 10% CO2, relative humidity >90%.
Day 2:
1) Remove the medium, then wash the cells with 100 pL of the pre-warmed HBSS and cultured with 100 pL 50pg/mL Neutral Red (NR) Medium and the cells will be returned to the incubator at 37 °C for an additional 3 hours.
2) Following the 3-hour uptake of the Neutral Red (NR), the medium will be discarded, the wells will be washed with HBSS, and 150 pL extraction buffer (1.0% Glacial Acetic Acid, 50% Ethanol, 49% dH2O) will be added to each well.
3) Shake the microplate gently on a microplate shaker for 2 min and incubated for 15 min in the dark until Neutral Red (NR) have been extracted from the cells and have formed a homogeneous solution. Measure the optical density of the Neutral Red (NR) extract at 540 nm in a spectrophotometer. Save data in an appropriate electronic file format for subsequent analysis.
For data analysis, raw data will be exported to Excel for calculation as the equation below.
1. Inhibition%= (1- (Sample /DMSO control) *100
2. The IC50 value will be determined from the concentration-response curve with Nonlinear Regression using Sigmoidal dose-response (variable slope) meanwhile transforming X values using X=Log(X) by XL-fit software (Supplier: ID Business Solutions Ltd., Software version : XL fit 5.5.0.5).
3. A Photo-Irritation-Factor (P I F) will be calculated using the following formula: PIF = IC50 (-irradiation) / IC50 (+irradiation).
Liver Microsome Metabolic Stability Assav (NAD PH):
Test compounds are incubated at 37°C with liver microsomes (pooled from multiple donors) at 1.0 pM in the presence of NADPH (~1.0 mM) at 0.5 mg/ml microsomal protein. Positive controls include testosterone (3A4 substrate), propafenone (2D6) and diclofenac (2C9). They will be incubated with microsomes in the presence of NADPH. Time samples (0, 5, 15, 30, 45 and 60 minutes) will be removed, immediately mixed with cold acetonitrile containing internal standard (IS). Test compounds incubated with microsomes without NADPH for 60 min are also included. Single point for each test condition (n = l). Samples are analyzed by LC/MS/MS; disappearance of test compound will be assessed based on peak area ratios of analyte/IS (no standard curve).
Liver Heoatocvte Assav (NADPH):
Test compounds are incubated at 37°C with cryopreserved liver hepatocytes (pooled from multiple donors) at 0.5 x 106 cells per mL. The reaction samples will be removed at multiple time points (0, 15, 30, 60, and 90 minutes), and medium control samples without cells at 0 and 90 minutes will be incubated. All samples will be immediately mixed with cold organic solution containing internal standard (IS) to stop the reaction. Samples will be analyzed by LC/MS/MS, and the disappearance of test compound will be assessed based on peak area ratios of analyte/IS (no standard curve).
Protein Bindina Assav:
The test compounds or positive control warfarin will be spiked into frozen plasma (commercial vendors, pooled from multiple individuals) at the final concentration of 2 pM. An aliquot of 150 pL of the compound-spiked plasma sample will be added to one side of the chamber in a 96-well equilibrium dialysis plate (HTD dialysis) and an equal volume of dialysis buffer (100 mM sodium phosphate and 150 mM NaCI, 7.4 ± 0.1) will be added to the other side of the chamber. An aliquot of plasma sample will be harvested before the incubation and used as TO samples for recovery calculation. Triplicate incubations will be performed. The plate will then be incubated in a humidified incubator with 5% CO2 at 37°C for 4 hours. After incubation, 50 pL samples will be taken from the plasma side as well as the buffer side. The plasma sample will be mixed with an equal volume of blank buffer; buffer samples will be mixed with an equal volume of blank plasma. The matrix-matched samples will be quenched with stop solution containing internal standard (IS). Samples are analyzed by LC-MS/MS. Test compound concentrations in plasma and buffer samples will be determined based on peak area ratio of analyte to IS without a standard curve.
HCT116 - UVA phototoxicity assav
The cell line HCT116 (ATCC, cat no. CCL-247) is passaged in RPMI-1640, supplemented with 10% heat Inactivated FBS, in 5% CO2 at 37°C, to a confluence of 70-90%. Media is aspirated, and the cell monolayer washed with 10 mL DPBS. After aspiration of DPBS, cells are detached using trypsin (5 minutes) before media is added to neutralize the trypsin. Cells are mixed in equal volumes of trypan blue (10 pL: 10 pL) and viable cells counted. Cells (500/well) were seeded on 384-well flat bottom plates in 25pL of culture medium containing compounds. Plates were incubated for 30 minutes at 37°C, 5% CO2. Following incubation one replicate plate is irradiated (lid off) with 125 mJ/cm2 UVA light for 5 minutes using a Stratalinker crosslinker CL-1000, fitted with UVA (365 nm) bulbs. Following irradiation all plates are incubated for a further 96 hours at 37°C, 5% CO2.
After incubation for 96 hours under normal growth condition, 25 pL of Cell Titer Gio reagent were added to each well and agitated at 600 rpm for 2 minutes on a plate shaker, plates are further incubated for 10 min at room temperature. End-point luminescence was then measured using a PHERAstar Plus (BMG Labtech) and normalized in relation to the average survival of samples treated only with DMSO (100% viability) and wells with no cells added (0% viability). Dose-dependent cell viability was fit using a four-parameter logistic curve in CDD Vault (Collaborative Drug). The 50% inhibitory concentrations (IC50) were determined from three
replicates. Ratios of IC50s between unirradiated and irradiated replicate plates were determined and used to determine phototoxicity of compounds.
>95% bound = ' + >75-95% bound =
>50-75% bound = '+ + + ', >25-50% bound = '+ + + + ', <25% bound = '+ + + + + '
Select Human hepatocyte data:
pL/min/lO6 cells < 10 = '+ + + ', 10-50 =
>50 '+' Select 3T3 Phototoxicity data:
It will be understood that the present invention has been described above by way of example only. The examples are not intended to limit the scope of the invention. Various modifications and embodiments can be made without departing from the scope and spirit of the invention, which is defined by the following claims only.
Claims
Formula (I) or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof; wherein :
R1 and R2 are each independently selected from hydrogen or a C1-C12 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include one or more cyclic groups, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety; or R1 and R2 together with the nitrogen atom to which they are attached form a 3- to 12-membered cyclic group, wherein the cyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a Ci-Ce saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a carbon atom, and wherein the C1-C12 monovalent group comprises:
(i) a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp2 hybridised carbon atom; and/or
(ii) a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp2 hybridised carbon atom; and/or
(iii) a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp2 hybridised carbon atom;
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is N, C-H, C-Hal or C-RX3; and
X4 is N or C; provided that no more than three of X1, X2, X3 and X4 are N;
RX1 and RX3 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
Q1 is O, S, N, N-H, N-RQ1, C-H, C-Hal, or C-R^2;
RQ1 is selected from a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety, provided that the atom of RQ1 that is directly attached to the nitrogen atom of N-RQ1 is a carbon atom;
RQ2 is selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups
each independently selected from oxo (=0) and =NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
A1 is N, C-H, C-Hal or C-RA1;
A2 is N, C-H, C-Hal or C-RA2;
A3 is N, C-H, C-Hal or C-RA3;
A4 is N, C-H, C-Hal or C-RA4; and
A5 is N or C; provided that no more than three of A1, A2, A3, A4 and A5 are N;
RA1, RA2, RA3 and RA4 are each independently selected from -OH, -SH, -NH2, -SO2H, -SO3H, -SO2NH2, -NO2, or a C1-C4 saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo and/or -NO2 groups, wherein the hydrocarbyl group may optionally include one or more heteroatoms each independently selected from N, O and S in its carbon skeleton, and wherein any -S- moiety in the hydrocarbyl group may optionally be substituted with one or two groups each independently selected from oxo (=0) and = NH to form a -SO-, -SO2-, -S(=NH)- or -SO( = NH)- moiety;
A6 is N or C; and each Hal is independently selected from a fluoro, chloro, bromo or iodo group.
2. A compound as claimed in claim 1, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a sp2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a primary or a secondary amine, wherein the nitrogen atom of the primary or secondary amine is not directly attached to a sp2 hybridised carbon atom.
3. A compound as claimed in claim 2, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R3 has the formula:
wherein :
R31 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated
hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R31 that is directly attached to the nitrogen atom of N-R31 is a carbon atom;
R32 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R32 that is directly attached to the nitrogen atom of NH-R32 is a carbon atom that is not substituted with an oxo (=0) group; or R31 and R32 together form a C2-C6 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R33, provided that the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a bond or a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL3, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL3 and R31, or any RL3 and R32, or any RL3 and any R33, together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R34, provided that where any RL3 and R32 together form a C1-C4 straight-chained alkylene group, the carbon atom of the alkylene group that is directly attached to the nitrogen atom of NH-R32 is not substituted with an oxo (=0) group; or any RL3 and any R33 together form a bond; and
each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
4. A compound as claimed in claim 3, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein:
R31 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, wherein the alkyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group;
R32 is hydrogen or a C1-C4 alkyl group, wherein the alkyl group may be straight-chained or branched, or be or include a cyclic group, and wherein the alkyl group may optionally be substituted with one or more fluoro groups; or R31 and R32 together form a C2-C5 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R33; each R33 is independently selected from a methyl or a fluoromethyl group;
L3 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or one or two groups RL3; each RL3 is independently selected from a methyl or a fluoromethyl group, or any two RL3 together with the atom or atoms to which they are attached form a 5- or 6-membered cycloalkylene group, or any RL3 and R31, or any RL3 and R32, together form a C2-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34, or any RL3 and any R33 together form a bond or a C1-C2 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or one or two groups R34; and each R34 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
5. A compound as claimed in claim 3 or claim 4, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein L3 is not a bond and R31 is not hydrogen.
6. A compound as claimed in claim 1, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R3 is a C1-C12 monovalent group, wherein the atom of R3 that is directly attached to the remainder of the compound of Formula (I) is
a sp2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a -OH group, wherein the oxygen atom of the -OH group is not directly attached to a sp2 hybridised carbon atom.
7. A compound as claimed in claim 6, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R3 has the formula:
wherein :
R41 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R41 that is directly attached to the nitrogen atom of N-R41 is a carbon atom;
L4 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL4, provided that the carbon atom of the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the oxygen atom of the -OH group is not substituted with an oxo (=0) group; each RL4 is independently selected from a methyl or a fluoromethyl group, or any two RL4 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL4 and R41 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R44; and each R44 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
8. A compound as claimed in claim 1, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R3 is a C1-C12 monovalent group, wherein the
atom of R3 that is directly attached to the remainder of the compound of Formula (I) is a sp2 hybridised carbon atom, and wherein the C1-C12 monovalent group comprises a -SH group, wherein the sulphur atom of the -SH group is not directly attached to a sp2 hybridised carbon atom.
9. A compound as claimed in claim 8, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R3 has the formula:
wherein :
R51 is hydrogen or a Ci-Ce saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton, provided that the atom of the hydrocarbyl group of R51 that is directly attached to the nitrogen atom of N-R51 is a carbon atom;
L5 is a C2-C5 straight-chained alkylene group or a -CH2CH2-O-CH2CH2- or -CH2CH2-NH-CH2CH2- group, wherein the alkylene, the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups RL5, provided that the carbon atom of the alkylene or the -CH2CH2-O-CH2CH2- or the -CH2CH2-NH-CH2CH2- group that is directly attached to the sulphur atom of the -SH group is not substituted with an oxo (=0) group; each RL5 is independently selected from a methyl or a fluoromethyl group, or any two RL5 may together with the atom or atoms to which they are attached form a 3- to 7-membered cycloalkylene group or a 4- to 7-membered saturated heterocyclic group, wherein the cycloalkylene group or the saturated heterocyclic group may optionally be fluoro substituted; or any RL5 and R51 may together form a C1-C4 straight-chained alkylene group, wherein the alkylene group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group and/or one, two, three or four groups R54; and each R54 is independently selected from a methyl or a fluoromethyl group; provided that the group R3 contains no more than 12 carbon atoms.
10. A compound as claimed in any one of claims 1 to 9, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R1 is a Ci-Cs saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a single cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, wherein the hydrocarbyl group optionally includes one or two heteroatoms each independently selected from N and O in its carbon skeleton, and R2 is selected from hydrogen or a C1-C3 alkyl or C1-C3 fluoroalkyl group.
11. A compound as claimed in any one of claims 1 to 9, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R1 has the formula -U-R10, wherein L1 is a C1-C2 alkylene or C1-C2 fluoroalkylene group, and R10 is a 5- or 6-membered heteroaryl group, such as an imidazolyl, pyrazolyl, oxazolyl, isoxazolyl, thiazolyl or isothiazolyl group, and R2 is selected from hydrogen or a C1-C3 alkyl or Ci- C3 fluoroalkyl group.
12. A compound as claimed in any one of claims 1 to 9, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein R1 and R2 together with the nitrogen atom to which they are attached form a 4- to 7-membered monocyclic group or a 6- to 12-membered bicyclic group, wherein the monocyclic or the bicyclic group may optionally be substituted with one or more substituents each independently selected from a halo, oxo (=0), -OH, -NH2 or a Ci-Ce saturated or unsaturated hydrocarbyl group, wherein the hydrocarbyl group may be straight- chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more halo groups, and wherein the hydrocarbyl group may optionally include one or two heteroatoms each independently selected from N and O in its carbon skeleton.
13. A compound as claimed in claim 12, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein -NRXR2 has the formula:
wherein : n is 1 or 2; m is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10;
each R11 is independently selected from a fluoro, methyl or fluoromethyl group, provided that no more than four R11 are selected from a methyl or fluoromethyl group;
X12 is O or NR12; and
R12 is hydrogen or a C1-C4 saturated hydrocarbyl group, wherein the saturated hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the saturated hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the saturated hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
14. A compound as claimed in claim 12, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein -NRXR2 has the formula :
wherein : j is 0, 1, 2 or 3; k is 0, 1, 2 or 3; p is 0, 1, 2 or 3; and q is 0, 1, 2 or 3; provided that: j + k = 2 or 3; p + q = 2 or 3; when j = 0, q is 1, 2 or 3; when k = 0, p is 1, 2 or 3; when p = 0, k is 1, 2 or 3; and when q = 0, j is 1, 2 or 3; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group;
R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; and each R16 is independently selected from a methyl or fluoromethyl group.
15. A compound as claimed in claim 12, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein -NR/R2 has the formula :
wherein :
X15 is O or NR15; j is 0, 1, 2, 3 or 4; k is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; and q is 0, 1, 2, 3 or 4; provided that: j + k = 3 or 4; p + q = 3 or 4; when j = 0, q is 1, 2, 3 or 4 and p is 1, 2, 3 or 4; when k = 0, q is 1, 2, 3 or 4 and p is 1, 2, 3 or 4; when p = 0, k is 1, 2, 3 or 4 and j is 1, 2, 3 or 4; and when q = 0, k is 1, 2, 3 or 4 and j is 1, 2, 3 or 4; and wherein : r is 0, 1 or 2; s is 0, 1 or 2;
R15 is hydrogen or a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-R150 group;
R150 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group; and each R16 is independently selected from a methyl or fluoromethyl group.
16. A compound as claimed in any one of claims 1 to 15, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein :
X1 is N, C-H, C-Hal or C-RX1;
X2 is N;
X3 is C-H, C-Hal or C-RX1;
X4 is C; and
RX1 and RX3 are each independently selected from a C1-C4 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or
include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton.
17. A compound as claimed in any one of claims 1 to 16, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein Q1 is O, S, N-H or N-RQ1, wherein RQ1 is selected from a C1-C4 alkyl, C3-C4 cycloalkyl, C1-C4 fluoroalkyl, C3-C4 fluorocycloalkyl, cyclopropylmethyl, fluorocyclopropylmethyl or -CO-RQ3 group, wherein RQ3 is selected from a C1-C3 alkyl, C1-C3 fluoroalkyl, cyclopropyl or fluorocyclopropyl group.
18. A compound as claimed in any one of claims 1 to 17, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein :
A1 is N, C-H, C-Hal or C-RA1;
A2 is N, C-H, C-Hal or C-RA2;
A3 is N, C-H, C-Hal or C-RA3;
A4 is N, C-H, C-Hal or C-RA4;
A5 is C; and
RA1, RA2, RA3 and RA4 are each independently selected from a C1-C4 saturated hydrocarbyl group, wherein the hydrocarbyl group may be straight-chained or branched, or be or include a cyclic group, wherein the hydrocarbyl group may optionally be substituted with one or more fluoro groups and/or a single oxo (=0) group, and wherein the hydrocarbyl group may optionally include a single heteroatom selected from N and O in its carbon skeleton; provided that no more than one of A1, A2, A3 and A4 is N; and provided that no more than two of A1, A2, A3 and A4 are C-RA1, C-RA2, C-RA3 or C-RA4.
19. A compound as claimed in any one of claims 1 to 18, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein A6 is N.
20. A compound as claimed in any one of claims 1 to 19, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein each Hal is independently selected from a fluoro, chloro or bromo group.
21. A compound as claimed in any one of claims 1 to 19, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, wherein the compound is a compound of Formula (V):
Formula (V) wherein R1, R2, R3, X1 and Q1 are as defined in accordance with any preceding claim.
23. An antibody-drug conjugate comprising a compound, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, as claimed in any one of claims 1 to 22.
24. A pharmaceutical composition comprising a compound, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, as claimed in any one of claims 1 to 22, or an antibody-drug conjugate as claimed in claim 23, and a pharmaceutically acceptable excipient.
25. A compound, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, as claimed in any one of claims 1 to 22, or an antibody-drug conjugate as claimed in claim 23, or a pharmaceutical composition as claimed in claim 24, for use in medicine.
26. A compound, or a pharmaceutically acceptable salt and/or solvate and/or prodrug thereof, as claimed in any one of claims 1 to 22, or an antibody-drug conjugate as claimed in claim 23, or a pharmaceutical composition as claimed in claim 24, for use in treating cancer.
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| GB2318175.3 | 2023-11-28 | ||
| GBGB2318175.3A GB202318175D0 (en) | 2023-11-28 | 2023-11-28 | Novel compounds |
| GBGB2318866.7A GB202318866D0 (en) | 2023-12-11 | 2023-12-11 | Novel compounds |
| GB2318866.7 | 2023-12-11 | ||
| GB2407458.5 | 2024-05-24 | ||
| GBGB2407458.5A GB202407458D0 (en) | 2024-05-24 | 2024-05-24 | Novel compounds |
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Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2006034113A2 (en) * | 2004-09-17 | 2006-03-30 | Cylene Pharmaceuticals, Inc. | Quinolone analogs as cell proliferation inhibitors |
| WO2007022474A2 (en) * | 2005-08-19 | 2007-02-22 | Cylene Pharmaceuticals, Inc. | HUMAN RIBOSOMAL DNA(rDNA) AND RIBOSOMAL RNA (rRNA) NUCLEIC ACIDS AND USES THEREOF |
| WO2009046383A1 (en) * | 2007-10-05 | 2009-04-09 | Cylene Pharmaceuticals, Inc. | Quinolone analogs and methods related thereto |
| WO2023083716A1 (en) * | 2021-11-10 | 2023-05-19 | Nerviano Medical Sciences S.R.L. | Anthracycline derivative linker reagents, antibody-drug conjugates and methods |
-
2024
- 2024-11-28 WO PCT/EP2024/083952 patent/WO2025114459A1/en active Pending
Patent Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2006034113A2 (en) * | 2004-09-17 | 2006-03-30 | Cylene Pharmaceuticals, Inc. | Quinolone analogs as cell proliferation inhibitors |
| WO2007022474A2 (en) * | 2005-08-19 | 2007-02-22 | Cylene Pharmaceuticals, Inc. | HUMAN RIBOSOMAL DNA(rDNA) AND RIBOSOMAL RNA (rRNA) NUCLEIC ACIDS AND USES THEREOF |
| WO2009046383A1 (en) * | 2007-10-05 | 2009-04-09 | Cylene Pharmaceuticals, Inc. | Quinolone analogs and methods related thereto |
| WO2023083716A1 (en) * | 2021-11-10 | 2023-05-19 | Nerviano Medical Sciences S.R.L. | Anthracycline derivative linker reagents, antibody-drug conjugates and methods |
Non-Patent Citations (30)
| Title |
|---|
| AHMED, A. A.NEIDLE, S.: "A G-Quadruplex-Binding Small Molecule and the HDAC Inhibitor SAHA (Vorinostat) Act Synergistically in Gemcitabine-Sensitive and Resistant Pancreatic Cancer Cells", MOLECULES, vol. 25, 2020, XP055871832, DOI: 10.3390/molecules25225407 |
| BIFFI, G.DI ANTONIO, M.TANNAHILL, D.BALASUBRAMANIAN, S.: "Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells", NAT. CHEM., vol. 6, 2014, pages 75 - 80 |
| BIFFI, G.TANNAHILL, D.MCCAFFERTY, J.BALASUBRAMANIAN, S.: "Quantitative visualization of DNA G-quadruplex structures in human cells", NAT. CHEM., vol. 5, 2013, pages 182 - 186, XP093192088, DOI: 10.1038/nchem.1548 |
| CHAMBERS, V. S. ET AL.: "High-throughput sequencing of DNA G-quadruplex structures in the human genome", NAT. BIOTECHNOL., vol. 33, 2015, pages 877 - 881 |
| CHEUNG-ONG, K.GIAEVER, G.NISLOW, C.: "DNA-Damaging Agents in Cancer Chemotherapy: Serendipity and Chemical Biology", CHEM. BIOL., vol. 20, 2013, pages 648 - 659, XP055141833, DOI: 10.1016/j.chembiol.2013.04.007 |
| HANSEL-HERTSCH, R. ET AL.: "G-quadruplex structures mark human regulatory chromatin", NAT. GENET., vol. 48, 2016, pages 1267 - 1272 |
| HILTON, J. ET AL.: "Results of the phase I CCTG IND.231 trial of CX-5461 in patients with advanced solid tumors enriched for DNA-repair deficiencies", NAT. COMMUN., vol. 13, 2022, pages 3607 |
| HUPPERT, J. L.BALASUBRAMANIAN, S.: "Prevalence of quadruplexes in the human genome", NUCLEIC ACIDS RES., vol. 33, 2005, pages 2908 - 2916 |
| KHOT, A. ET AL.: "First-in-Human RNA Polymerase I Transcription Inhibitor CX-5461 in Patients with Advanced Hematologic Cancers: Results of a Phase I Dose-Escalation Study", CANCER DISCOV., vol. 9, 2019, pages 1036 - 1049 |
| KWOK, C. K., MARSICO, G., SAHAKYAN, A. B., CHAMBERS, V. S. & BALASUBRAMANIAN,S.: " RG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome.", NAT. METHODS, vol. 13, 2016, pages 841 - 844 |
| LOPES, J. ET AL.: "G-quadruplex-induced instability during leading-strand replication", EMBO J., vol. 30, 2011, pages 4033 - 4046 |
| LYU, J.SHAO, R.KWONG YUNG, P. Y.ELSASSER, S. J.: "Genome-wide mapping of G-quadruplex structures with CUT&Tag", NUCLEIC ACIDS RES., 2021, pages 1 - 13 |
| MARCHETTI, C.: " Targeting Multiple Effector Pathways in Pancreatic Ductal Adenocarcinoma with a G-Quadruplex-Binding Small Molecule.", J. MED. CHEM., vol. 61, 2018, pages 2500 - 2517 |
| MARSICO, G. ET AL.: "Whole genome experimental maps of DNA G-quadruplexes in multiple species", NUCLEIC ACIDS RES., vol. 47, 2019, pages 3862 - 3874 |
| MASUD, T. ET AL.: "Ubiquitin-mediated DNA damage response is synthetic lethal with G-quadruplex stabilizer CX-5461", SCI. REP., vol. 11, 2021, pages 9812 |
| NEIDLE, S.: "Quadruplex Nucleic Acids as Novel Therapeutic Targets.", CHEM., vol. 59, 2016, pages 5987 - 6011, XP055644394, DOI: 10.1021/acs.jmedchem.5b01835 |
| OLIVIERI, M.: "A Genetic Map of the Response to DNA Damage in Human Cells ", CELL, vol. 182, 2020, pages 481 - 496 |
| PLOS ONE, vol. 9, 2014, pages 102711 |
| RODRIGUEZ, R. ET AL.: "Small-molecule-induced DNA damage identifies alternative DNA structures in human genes", NAT. CHEM. BIOL., vol. 8, 2012, pages 301 - 310, XP055322282, DOI: 10.1038/nchembio.780 |
| SATO, K.KNIPSCHEER, P.: "G-quadruplex resolution : From molecular mechanisms to physiological relevance", DNA REPAIR (AMST), vol. 130, 2023, pages 103552 |
| SAUER, M.PAESCHKE, K.: "G-quadruplex unwinding helicases and their function in vivo", BIOCHEM. SOC. TRANS., vol. 45, 2017, pages 1173 - 1182, XP055624056, DOI: 10.1042/BST20170097 |
| SIDDIQUI-JAIN, A.GRAND, C. L.BEARSS, D. J.HURLEY, L. H.: "Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription", PROC. NATL. ACAD. SCI., vol. 99, 2002, pages 11593 - 11598, XP002437542, DOI: 10.1073/pnas.182256799 |
| SPIEGEL, J.ADHIKARI, S.BALASUBRAMANIAN, S., TRENDS CHEM., vol. 2, 2020, pages 123 - 136 |
| VARSHNEY, D.SPIEGEL, J.ZYNER, K.TANNAHILL, D.BALASUBRAMANIAN, S.: "The regulation and functions of DNA and RNA G-quadruplexes", NAT. REV. MOL. CELL BIOL., vol. 21, 2020, pages 459 - 474, XP037198628, DOI: 10.1038/s41580-020-0236-x |
| WARD, J. D., BARBER, L. J., PETALCORIN, M. I. R., YANOWITZ, J. & BOULTON, S. J.: "Replication blocking lesions present a unique substrate for homologous recombination", EMBO J., vol. 26, 2007, pages 3384 - 3396 |
| XU, H.: "CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours. ", NAT. COMMUN., vol. 8, 2017, pages 14432 |
| YU, Z.: "Chem-map profiles drug binding to chromatin in cells.", BIOTECHNOL., 2023 |
| ZHENG, K. ET AL.: "Detection of genomic G-quadruplexes in living cells using a small artificial protein", NUCLEIC ACIDS RES., vol. 48, 2020, pages 11706 - 11720, XP093090995, DOI: 10.1093/nar/gkaa841 |
| ZIMMER, J. ET AL.: "Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex-Interacting Compounds", MOL. CELL, vol. 61, 2016, pages 449 - 460, XP029408447, DOI: 10.1016/j.molcel.2015.12.004 |
| ZYNER, K. G. ET AL.: "Genetic interactions of G-quadruplexes in humans", ELIFE, vol. 8, 2019, pages 1 - 40 |
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