WO2025113592A1 - Rna inhibitor for inhibiting gene expression of complement system and use thereof - Google Patents
Rna inhibitor for inhibiting gene expression of complement system and use thereof Download PDFInfo
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- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/113—Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
Definitions
- the present invention belongs to the field of biomedicine, and specifically relates to an RNA inhibitor for inhibiting complement system gene expression and application thereof.
- RNAi RNA interference
- dsRNA double-stranded RNA
- RNA inhibitor process a nuclease called “Dicer” cuts or “dices” the long-chain dsRNA into small fragments of 21 to 25 nucleotides. These small fragments, called small interfering RNA (siRNA), have their antisense strands loaded onto the Argonaute protein (AGO2).
- AGO2 loading occurs in the RISC-loading complex, a ternary complex consisting of the Argonaute protein, Dicer, and the dsRNA binding protein (TRBP for short).
- the sense strand Passenger strand
- Passenger strand is cleaved and expelled by AGO2.
- AGO2 then uses the antisense strand to bind to mRNAs containing completely complementary sequences and then catalyzes the cleavage of these mRNAs, causing the mRNA split to lose its role as a translation template, thereby preventing the synthesis of related proteins. After cleavage, the cleaved mRNA is released, and the RISC-loading complex loaded with the antisense strand is recycled for another round of cleavage.
- RNAi technology treats diseases at the mRNA level, which is more efficient than chemical small molecule drugs and biological macromolecule drugs at the protein level.
- the sense and antisense strand sequences of siRNA with high specificity and good inhibitory effect can be designed according to specific gene sequences. These single-stranded sequences are synthesized through solid phase, and then the sense and antisense strands are paired into siRNA according to the base pairing principle in a specific annealing buffer, and finally delivered to the corresponding target in the body through a carrier system, degrading the target mRNA and destroying the function of the target mRNA as a translation template, thereby preventing the synthesis of related proteins.
- siRNA is unstable in blood and tissues and is easily degraded by nucleases.
- the sense strand and/or antisense strand of siRNA can be modified, but these chemical modifications only provide limited protection from nuclease degradation and may ultimately affect the activity of siRNA. Therefore, a corresponding delivery system is also needed to ensure that siRNA passes through the cell membrane safely and efficiently. Since siRNA has a large molecular weight, carries a large amount of negative charge, and has high water solubility, it cannot pass through the cell membrane smoothly and reach the cell.
- liposomes The basic structure of liposomes is composed of a hydrophilic core and a phospholipid bilayer. It has a phospholipid bilayer similar to a biological membrane and has high biocompatibility. Therefore, liposomes once became the most popular and widely used siRNA carrier.
- Liposome-mediated siRNA delivery mainly encapsulates siRNA into liposomes to protect siRNA from degradation by nucleases, improve the efficiency of siRNA passing through cell membrane barriers, and thus promote cell absorption. For example, anionic liposomes, pH-sensitive liposomes, immunoliposomes, fusogenic liposomes, and cationic lipids, etc. Although certain progress has been made, liposomes themselves are prone to induce inflammatory reactions.
- the asialoglycoprotein receptor (ASGPR) in the liver is a receptor specifically expressed by hepatocytes and is a highly efficient endocytic receptor. Since the secondary end of various glycoproteins exposed after enzyme or acid hydrolysis of sialic acid in the body under physiological conditions is a galactose residue, the sugar that ASGPR specifically binds is galactosyl, so it is also called galactose-specific receptor. Monosaccharide and polysaccharide molecules such as galactose, galactosamine, and N-acetylgalactosamine have high affinity for ASGPR.
- ASGPR The main physiological function of ASGPR is to mediate the clearance of asialoglycoproteins, lipoproteins and other substances in the blood, and it is closely related to the occurrence and development of liver diseases such as viral hepatitis, cirrhosis, and liver cancer.
- liver diseases such as viral hepatitis, cirrhosis, and liver cancer.
- the discovery of this characteristic of ASGPR plays an important role in the diagnosis and treatment of hepatic diseases (Ashwell G, Harford J, Carbohydrate specific Receptors of the Liver, Ann Rev Biochem 1982 51:531-554).
- the therapeutic drugs for liver-derived diseases containing galactose or galactosamine and their derivatives in the structure can specifically bind to ASGPR, thereby having active liver targeting and requiring no other carrier system for delivery.
- the activation of the complement system includes three pathways: the classical pathway, the lectin pathway, and the alternative pathway. The main difference between these three pathways is the initiation process. After initiation, C3 convertase is formed and further cleaves C3. The C3b fragment combines with the previous complex to form C5 convertase, which cleaves C5b and C5a, causing the assembly of MAC, which cleaves cells and stimulates an inflammatory response to remove foreign substances.
- C1q The classical pathway (CP) is usually initiated by the attachment of C1q to an immune complex such as IgM or IgG.
- C1q then activates C1r, which changes the conformation of the C1r2-C1s2 structure.
- C1r releases C1s, which has serine protease (SP) activity and cleaves C4 and C2 to form C4b2a (C3 convertase).
- C3 convertase forms C5 convertase by cleaving C3 and subsequently binding to C3b.
- C4a, C3a, and C5a stimulate the inflammatory response.
- C5b forms C5b-9MAC with the help of C6, C7, C8, and C9 to attack host cells or pathogens.
- Activation of the lectin pathway is identical to activation of the classical pathway (CP), except that the initiator of the LP is mannose-binding lectin (MBL), which forms a multimeric lectin complex by binding to ficolin. This binding leads to activation of the mbl-associated serine proteases (MASPs), which trigger the complement system.
- MASP-1 and MASP-2 are similar to C1r and C1s, respectively. MASP-1 and MASP-2 fully activate the complement system by cleaving C4 and C2 to form the C3 convertase.
- the alternative activation pathway differs from the classical pathway (CP) in that activation bypasses the three components of C1, C4, and C2 and directly activates C3.
- a large number of C3 thioester domains (TED) become metastable, exposing C3 to the factor b (Fb) binding site.
- C3b is recognized by factor B to form the complex C3bB.
- the C3bB complex is in turn cleaved by factor D to produce the active form of C3 convertase (C3bBb).
- C3 convertase (C3bBb) breaks down C3 into C3a and C3b.
- C3b binds to pathogens or target cells as an active fragment.
- C3b In response to C3 convertase, C3b produces C5 convertase, which cleaves C5 to recruit the membrane attack complex (MAC) to lyse pathogens. Both types of C3 convertase (C3bB ⁇ C3bBb) will cleave C3 to form C3b. C3b then binds more factor B to enhance complement activation through AP. Alternatively, C3b leads to the formation of active C5 convertase (C3bBbC3b or C4bC2bC3b), which cleaves C5 and triggers later events leading to the formation of the membrane attack complex (MAC) (C5b-9).
- C3bBbC3b or C4bC2bC3b active C5 convertase
- Inhibitors that inhibit the expression of complement C3 and C5 genes can be used to treat diseases such as paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome, rheumatoid arthritis, Alzheimer's disease (AD), amyotrophic lateral sclerosis (ALS), schizophrenia, Parkinson's disease (PD), prion diseases, complement component C3-related eye diseases, ischemia-reperfusion injury and neurodegenerative diseases.
- diseases such as paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome, rheumatoid arthritis, Alzheimer's disease (AD), amyotrophic lateral sclerosis (ALS), schizophrenia, Parkinson's disease (PD), prion diseases, complement component C3-related eye diseases, ischemia-reperfusion injury and neurodegenerative diseases.
- PNH paroxysmal nocturnal hemoglobinuria
- AD amyotrophic lateral sclerosis
- PD Parkinson's disease
- Inhibitors that inhibit the expression of complement factor B genes can be used to treat subjects with complement factor B-associated disorders, such as C3 glomerulopathy, systemic lupus erythematosus (SLE) such as lupus nephritis, IgA nephropathy, diabetic nephropathy, and polycystic kidney disease.
- complement factor B-associated disorders such as C3 glomerulopathy, systemic lupus erythematosus (SLE) such as lupus nephritis, IgA nephropathy, diabetic nephropathy, and polycystic kidney disease.
- the complement inhibitors available on the market include Soliris, Ultomiris, Empaveli, Eculizumab, Ravulizumab or Iptacopan (LNP023). These peptides, monoclonal antibodies or small molecule drugs can be used in combination with RNAi inhibitors that inhibit the expression of the complement system, thereby improving the ability of the whole body to inhibit the complement system.
- RNAi inhibitors that inhibit the expression of the complement system, thereby improving the ability of the whole body to inhibit the complement system.
- most of the current complement inhibitors are evaluated in clinical practice and are administered once a week to once every two weeks. The cost is relatively high and they can also cause low-level hemolysis in PNH subjects. Therefore, patients with the complement system still need a new alternative drug or combination drug.
- the present invention provides an RNA inhibitor or a pharmaceutically acceptable salt thereof for inhibiting the expression of complement system genes.
- RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof wherein the RNA inhibitor is formed by base pairing of a sense strand and an antisense strand with a chain length of 15-30, preferably 19-23, wherein the antisense strand includes a region complementary to an mRNA encoding a complement system, and wherein the complementary region comprises at least 15 consecutive nucleotides that differ by 0, 1, 2, or 3 nucleotides from the antisense strand of any one of Tables 1-1, 1-2, and 1-3.
- RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof wherein the RNA inhibitor is an RNA inhibitor for inhibiting CFB gene expression, wherein the antisense strand includes a region complementary to the target sequence, the target sequence is: 5'gucuagucaacuuaauugaga 3' SEQ ID NO: 25, the starting position in NM_001710.5 is at 1157, and there is at least 85% base complementarity between the sense strand and the antisense strand.
- RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof wherein the RNA inhibitor is an RNA inhibitor for inhibiting C5 gene expression, wherein the antisense strand includes a region complementary to the target sequence, the target sequence is: 5'uugucccaguauucuauguuu 3'SEQ ID NO: 826, the starting position in NM_001735.3 is at position 3073, and there is at least 85% base complementarity between the sense strand and the antisense strand.
- RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof wherein the RNA inhibitor is an RNA inhibitor for inhibiting C3 gene expression, wherein the antisense strand includes a region complementary to a target sequence, the target sequence is: 5'gguguugacagauacaucu 3' SEQ ID NO: 1952, the starting position in NM_000064.4 is at position 4329; 5'ggagccuacagagaaauucua 3' SEQ ID NO: 2039, the starting position in NM_000064.4 is at position 771; the target sequence is: 5'agaaa uucuacuacaucuaua 3'SEQ ID NO: 2048, the starting position in NM_000064.4 is 782; the target sequence is: 5'gcugaggagaauugcuucaua 3'SEQ ID NO: 2240, the starting position in NM_000064.4 is 4603; the target sequence is: 5'ggagaauugcuucauacaaa 3
- the aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
- the sense strand may be any sequence containing at least 85% base complementarity with the antisense strand;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide.
- CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
- the sense strand being any sequence containing at least 85% base complementarity with the antisense strand;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- the aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
- the sense strand may be any sequence containing at least 85% base complementarity with the antisense strand;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide.
- the antisense strand may be any sequence containing at least 85% base complementarity with the sense strand;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- the aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
- the sense strand can be any sequence that contains at least 85% base complementarity with the antisense strand.
- the antisense strand can be any sequence that contains at least 85% base complementarity with the sense strand.
- the aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof wherein the sense strand is SEQ ID NO: 25 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides; and the antisense strand is SEQ ID NO: 293 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
- Antisense strand 5'ucucaauuaaguugacuagacac 3' SEQ ID NO: 293;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide.
- the sense strand is SEQ ID NO: 826 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 1278 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
- Antisense strand 5'aaacauagaauacugggacaacg 3'SEQ ID NO: 1278;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide.
- the sense strand is SEQ ID NO: 2048 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 2639 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
- Antisense strand 5'uauagauguaguagaauuucucu 3' SEQ ID NO: 2639;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide.
- the sense strand is SEQ ID NO: 2639 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 2831 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
- Sense strand 5'gcugaggagaauugcuucaua 3'SEQ ID NO: 2240;
- Antisense strand 5'uaugaagcaauucuccucagcac 3' SEQ ID NO: 2831;
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide.
- RNA inhibitor or a pharmaceutically acceptable salt thereof, at least one nucleotide of the RNA inhibitor is modified.
- RNA inhibitor or its pharmaceutically acceptable salt the modification includes: 2'-fluoro modification, 2'-methoxy modification, thiophosphate modification, invAb modification, glycerol nucleotide, 3' terminal deoxythymine (dT) nucleotide, locked nucleotide, unlocked nucleotide, conformationally restricted nucleotide, constrained ethyl nucleotide, 2'-amino modified nucleotide, 2'-O-allyl modified nucleotide, 2'-C-alkyl modified nucleotide, 2'-hydroxyl modified nucleotide, 2'-methoxyethyl modified nucleotide, 2'-O-alkyl modified nucleotide, 2' phosphate modification or 2-O-(N-methylacetamide) modification, morpholino nucleotide, aminophosphoryl, abasic nucleotide, abasic deoxynucleotide
- the aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
- the aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
- the aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
- G 2'-O-methylguanylate
- A 2'-O-methyladenylate
- U 2'-O-methyluridylate
- C 2'-O-methylcytidine
- Gs 2'-O-methyl-3'-thioguanylate
- As 2'-O-methyl-3'-thioadenylate
- Us 2'-O-methyl-3'-thiouridylate
- Cs 2'-O-methyl-3'-thiocytidine
- fG 2'-fluoroguanylate
- fA 2'-fluoroadenylate
- fU 2'-fluorouridine Acid
- fC 2'-fluorocytidylic acid
- fGs 2'-fluoro-3'-thioguanylic acid
- fAs 2'-fluoro-3'-thioadenylic acid
- fUs 2'-fluoro-3'-thiouridylic acid
- fC 2'-
- CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
- G 2'-O-methylguanylic acid
- A 2'-O-methyladenylic acid
- U 2'-O-methyluridylic acid
- C 2'-O-methylcytidylic acid
- the antisense strand can be any sequence containing at least 85% base complementarity with the sense strand, and the modification method is not limited.
- G 2'-O-methylguanylic acid
- A 2'-O-methyladenylic acid
- U 2'-O-methyluridylic acid
- C 2'-O-methylcytidylic acid
- the antisense strand can be any sequence containing at least 85% base complementarity with the sense strand, and the modification method is not limited.
- G 2'-O-methylguanylic acid
- A 2'-O-methyladenylic acid
- U 2'-O-methyluridylic acid
- C 2'-O-methylcytidylic acid
- the antisense strand can be any sequence containing at least 85% base complementarity with the sense strand, and the modification method is not limited.
- the aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof is SEQ ID NO: 559 or a sequence that differs therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 588 or a sequence that differs therefrom by one, two or three nucleotides:
- Antisense strand 5'UsdCsUCdAATUAAGTUfGACUAGACsAsC 3'SEQ ID NO: 588;
- G 2'-O-methylguanylate
- A 2'-O-methyladenylate
- U 2'-O-methyluridylate
- C 2'-O-methylcytidine
- Gs 2'-O-methyl-3'-thioguanylate
- As 2'-O-methyl-3'-thioadenylate
- Us 2'-O-methyl-3'-thiouridylate
- Cs 2'-O-methyl-3'-thiocytidine
- fG 2'-fluoroguanylate
- f A 2'-fluoroadenylic acid
- fU 2'-fluorouridylic acid
- fC 2'-fluorocytidylic acid
- fGs 2'-fluoro-3'-thioguanylic acid
- fAs 2'-fluoro-3'-thioadenylic acid
- fUs 2'-fluoro-3'-thiouridylic acid
- the aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof is SEQ ID NO: 1537 or a sequence that differs therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 1598 or a sequence that differs therefrom by one, two or three nucleotides:
- Antisense strand 5'AsdAsACdAUdAGAAUdACfUGGGACAAsCsG 3'SEQ ID NO: 1598;
- G 2'-O-methylguanylate
- A 2'-O-methyladenylate
- U 2'-O-methyluridylate
- C 2'-O-methylcytidine
- Gs 2'-O-methyl-3'-thioguanylate
- As 2'-O-methyl-3'-thioadenylate
- Us 2'-O-methyl-3'-thiouridylate
- Cs 2'-O-methyl-3'-thiocytidine
- fG 2'-fluoroguanylate
- f A 2'-fluoroadenylic acid
- fU 2'-fluorouridylic acid
- fC 2'-fluorocytidylic acid
- fGs 2'-fluoro-3'-thioguanylic acid
- fAs 2'-fluoro-3'-thioadenylic acid
- fUs 2'-fluoro-3'-thiouridylic acid
- the aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof is SEQ ID NO: 1651 or a sequence that differs therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 1671 or a sequence that differs therefrom by one, two or three nucleotides:
- Antisense strand 5'UsdAsUAdGATGUAGTAfGAAUUUCUsCsU 3'SEQ ID NO: 1665;
- the sense strand is SEQ ID NO: 1645 or a sequence that differs therefrom by one, two or three nucleotides
- the antisense strand is SEQ ID NO: 1665 or a sequence that differs therefrom by one, two or three nucleotides:
- Sense strand 5'GsCsUGAGfGAfGfAfAUUGCUUCAsUsA 3'SEQ ID NO: 1651;
- Antisense strand 5'UsfAsUGAfAGfCAAUUCfUCfCUCAGCsAsC 3'SEQ ID NO: 1671;
- G 2'-O-methylguanylate
- A 2'-O-methyladenylate
- U 2'-O-methyluridylate
- C 2'-O-methylcytidine
- Gs 2'-O-methyl-3'-thioguanylate
- As 2'-O-methyl-3'-thioadenylate
- Us 2'-O-methyl-3'-thiouridylate
- Cs 2'-O-methyl-3'-thiocytidine
- fG 2'-fluoroguanylate
- f A 2'-fluoroadenylic acid
- fU 2'-fluorouridylic acid
- fC 2'-fluorocytidylic acid
- fGs 2'-fluoro-3'-thioguanylic acid
- fAs 2'-fluoro-3'-thioadenylic acid
- fUs 2'-fluoro-3'-thiouridylic acid
- mismatches can be accommodated in the sense strand or antisense strand of the RNA inhibitor of the present invention.
- the mismatch position can occur at the 5' or 3' end or within the sequence.
- the mismatch is no more than 3 nucleotides, for example, 0, 1, 2, or 3 nucleotides.
- the RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof further contains carrier structures 5'MVIP and 3'MVIP, and the structure of the RNA inhibitor is as shown in Formula Ia, Ib or Ic:
- the vector structure includes 5'MVIP (5'MultiValent Import Platform) and 3'MVIP (3'MultiValent Import Platform);
- 5'MVIP consists of a transfer point R 1 , a connecting chain D, a linker B, a branch chain L and a liver-targeting specific ligand X, which is connected to the 5' end of the sense chain or the 5' end of the antisense chain through the transfer point R 1. Its structure is shown in general formula I:
- 3'MVIP consists of a transfer point R 2 , a connecting chain D, a linker B, a side chain L and a liver-targeting specific ligand X, which is connected to the 3' end of the sense chain or the 3' end of the antisense chain through the transfer point R 2. Its structure is shown in general formula II:
- the transition point R1 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
- R 1 is -NH(CH 2 ) x CH 2 O-, wherein x is any integer from 3 to 12, preferably any integer from 4 to 6;
- the transition point R2 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
- transition point R 2 is -NH(CH 2 ) x1 CH(OH)(CH 2 ) x2 CH 2 O-, wherein x1 is any integer from 1 to 4, and x2 is any integer from 0 to 4;
- the liver-targeting specific ligand X is selected from the structure used to enhance the uptake of RNA inhibitors by hepatocytes, and is the same or different within each of 5'MVIP and 3'MVIP or between 5'MVIP and 3'MVIP, and is selected from monosaccharides and their derivatives, preferably N-acetylgalactosamine and its derivatives, and more preferably selected from the following structures:
- W is selected from one or two of -OH, -NHCOOH and -NHCO(CH 2 ) q CH 3 , wherein q is an integer of 0-4;
- the branched chain L is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from one or more of the following structures:
- r1 is any integer from 1 to 12
- r2 is any integer from 0 to 20
- Z is H, an alkyl group or an amide group, and the alkyl group is, for example, a C 1 -C 5 alkyl group;
- the linker B is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from the following structures:
- A1 and A2 are each independently C, O, S, -NH-, carbonyl, amide, phosphoryl or thiophosphoryl, and r is any integer from 0 to 4;
- the connecting chain D is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from the following structures:
- 5'MVIP is selected from any one of 5'MVIP01 to 5'MVIP22 in Table 11.
- the 3’MVIP is selected from any one of 3’MVIP01 to 3’MVIP27 in Table 12.
- 5'MVIP is 5'MVIP01 or 5'MVIP09 as shown below
- 3'MVIP is 3'MVIP01, 3'MVIP09 or 3'MVIP17 as shown below:
- the RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof wherein the combination of the sense chain 5’MVIP and the antisense chain 3’MVIP is 5’MVIP01/3’MVIP01, 5’MVIP01/3’MVIP17 or 5’MVIP09/3’MVIP09, or the combination of the sense chain 5’MVIP and the sense chain 3’MVIP is 5’MVIP01/3'MVIP09 or 5’MVIP09/3’MVIP01.
- the CFB RNA inhibitor is selected from Kylo-17-DS2911.
- the C5 RNA inhibitor is selected from Kylo-19-DS7881.
- the C3 RNA inhibitor is selected from Kylo-27-DS8201 and Kylo-27-DS8141.
- RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof is used in the preparation of a medicament for treating and/or preventing diseases associated with increased levels of the complement system, including but not limited to lipid metabolism disorders.
- a pharmaceutical composition comprises the aforementioned RNA inhibitor or other therapeutic agents for treating or preventing complement system-related diseases.
- a pharmaceutical composition comprises the aforementioned RNA inhibitor or a pharmaceutically acceptable salt thereof and a pharmaceutically acceptable excipient, and the dosage form is an oral agent, an intravenous injection, or a subcutaneous or intramuscular injection, preferably a subcutaneous injection.
- FIG1 is a high-resolution mass spectrum of ERCd-01-c2 synthesized in 3.1.15 in Example 3 of the present application;
- FIG2 is a high-resolution mass spectrum of 3'MVIP17-c1 synthesized in 3.1.2.6 of Example 3 of the present application;
- FIG3 is a high-resolution mass spectrum of 5'MVIP09-ERCd-PFP-c2 synthesized in 3.2.1.2 of Example 3 of the present application;
- FIG4 is a schematic diagram showing the effect of hCFB administration of the present invention on the inhibition rate of hCFB protein in mouse serum;
- FIG5 is a schematic diagram showing the effect of hC5 administration of Example 7-2 of the present invention on the inhibition rate of hC5 protein in mouse serum;
- Example 7-3 of the present invention is a schematic diagram showing the effect of hC5 administration of Example 7-3 of the present invention on the inhibition rate of hC5 protein in mouse serum;
- FIG. 7 is a schematic diagram showing the effect of hC3 administration of the present invention on the inhibition rate of hC3 protein in mouse serum;
- FIG8 is a schematic diagram showing the effect of the CFB RNA inhibitor of the present invention on the inhibition rate of CFB protein in NHP cynomolgus monkeys;
- Figure 9 is a schematic diagram showing the effect of the CFB RNA inhibitor of the present invention on the CFB mRNA level in the liver tissue of cynomolgus monkeys;
- Figure 10 is a schematic diagram showing the effect of the C5 RNA inhibitor of the present invention on the inhibition rate of C5 protein in NHP cynomolgus monkeys;
- Figure 11 is a schematic diagram showing the effect of the C5 RNA inhibitor of the present invention on the retention level of CH50 activity in NHP cynomolgus monkeys;
- Figure 12 is a schematic diagram showing the effect of the C3 RNA inhibitor of the present invention on the inhibition rate of C3 protein in NHP cynomolgus monkeys;
- complement system mRNA sequences are readily obtained using publicly available databases, such as GenBank, UniProt, OMIM and the Macaca Genome Project website.
- CFB complement factor B
- C3 refers to complement C3, whose mRNA sequence can be found, for example, in GenBank NM_000064.4; cynomolgus monkey NC_000019.10; mouse NM_009778; rat NM_016994.
- C5 refers to complement C5, whose mRNA sequence can be found, for example, in GenBank NM_001735.3; mouse NM_013485; rat NM_057146.
- Indicators for judging "inhibiting the expression of CFB” include: inhibition of the mRNA level of the CFB gene, inhibition of the protein level of the CFB gene, and any other level of inhibition; and may also be: CH50 activity as a measure of total hemolytic complement, AH50 for measuring the hemolytic activity of the complement alternative pathway, and/or lactate dehydrogenase (LDH) level as a measure of intravascular hemolysis, and/or hemoglobin level; the levels of C3, C9, C5, C5a, C5b and soluble C5b-9 complex may also be measured to evaluate the CFB expression level.
- CH50 activity as a measure of total hemolytic complement
- AH50 for measuring the hemolytic activity of the complement alternative pathway
- LDH lactate dehydrogenase
- the levels of C3, C9, C5, C5a, C5b and soluble C5b-9 complex may also be measured to evaluate the CFB expression level.
- the judgment indicators of "inhibition of C3 expression” include: C3 determination, total complement determination, immune complex determination, C3 plasma concentration determination, and C3 fixed antibody method test; C3 determination can be any level of inhibition, such as inhibition of the mRNA level of the C3 gene, or inhibition of the protein level of the C3 gene; C3 determination may be performed together with other complement components to evaluate the function of the entire complement system. This usually includes measuring C4 concentration and indicators such as CH50; immune complex determination: immune complex is a structure composed of antibodies and antigens, which is formed in certain autoimmune diseases.
- Serum immune complex determination can be used to detect these immune complexes to evaluate whether they cause activation of the immune system, leading to a decrease in C3;
- C3 plasma concentration determination evaluate the function of the complement system by measuring the concentration of C3 in plasma. Under normal circumstances, the concentration of C3 should be within the normal range;
- C3 fixed antibody method This method is used to measure the ability of C3 to bind to specific antigens to evaluate the function of the complement system. It can also be to measure indices related to C3 gene levels such as CH50 activity as a measure of total hemolytic complement, AH50 to measure the hemolytic activity of the alternative complement pathway, and/or lactate dehydrogenase (LDH) levels as a measure of intravascular hemolysis, and/or hemoglobin levels.
- C3 expression can also be evaluated by measuring the levels of CFB, C9, C5, C5a, C5b, and soluble C5b-9 complexes.
- Indicators for judging "inhibiting the expression of C5" include: inhibition of the mRNA level of the C5 gene, inhibition of the protein level of the C5 gene, and any other level of inhibition; it can also be: CH50 activity as a measure of total hemolytic complement, AH50 for measuring the hemolytic activity of the complement alternative pathway, and/or lactate dehydrogenase (LDH) level as a measure of intravascular hemolysis, and/or hemoglobin level; the levels of C3, C9, C5, C5a, C5b and soluble C5b-9 complex can also be measured to evaluate the CFB expression level.
- CH50 activity as a measure of total hemolytic complement
- AH50 for measuring the hemolytic activity of the complement alternative pathway
- LDH lactate dehydrogenase
- the levels of C3, C9, C5, C5a, C5b and soluble C5b-9 complex can also be measured to evaluate the CFB expression level.
- target sequence refers to a continuous portion of the nucleotide sequence of the mRNA molecule formed during the transcription of the complement system gene, including mRNA that is the product of RNA processing of the primary transcription product.
- the target portion of the sequence will be at least long enough to be used as a substrate for RNA inhibitor-guided degradation at or near the portion of the nucleotide sequence of the mRNA molecule formed during the transcription of the complement system gene.
- the length of the "target sequence” is generally about 15-30 nucleotides.
- RNA inhibitor generally refers to an agent comprising RNA as defined in the present term, and which can mediate targeted cleavage of RNA transcripts through the RNA-induced silencing complex (RISC) pathway.
- RISC RNA-induced silencing complex
- the RNA inhibitor can be a single-stranded siRNA (ssRNA inhibitor) introduced into a cell or organism to inhibit a target mRNA (i.e., a complement system gene).
- ssRNA inhibitor single-stranded siRNA
- the single-stranded RNA inhibitor binds to the RISC endonuclease Argonaute 2, which then cleaves the target mRNA.
- Single-stranded siRNAs are generally 15 to 30 nucleotides in length and are chemically modified.
- the "RNA inhibitor” used in the present application is a double-stranded RNA, and is referred to as a "double-stranded RNA inhibitor", “double-stranded RNA (dsRNA, DS) molecule", “dsRNA agent” or “dsRNA” in the present invention.
- dsRNA refers to a complex of ribonucleic acid molecules, which has a duplex structure comprising two antiparallel and substantially complementary nucleic acid chains, referred to as having "sense” and “antisense” orientations relative to the target mRNA.
- double-stranded RNA dsRNA triggers the degradation of the target mRNA through a post-transcriptional gene silencing mechanism (referred to as RNA inhibition or RNA interference in the present invention).
- nucleotides in the sense strand and antisense strand of a dsRNA molecule are ribonucleotides, but as described in detail in the present invention, one or more non-ribonucleotides, such as deoxyribonucleotides or modified nucleotides, may also be included.
- the RNA inhibitors involved in this specification may include chemically modified ribonucleotides, and may have modified nucleotides in multiple regions.
- modified nucleotides used in the present invention means independently having a modified sugar moiety, a modified internucleotide connection or a modified nucleobase, or a nucleotide in any combination thereof.
- modified nucleotides encompasses replacement, addition or removal of, for example, functional groups or atoms of internucleotide connections, sugar moieties or nucleobases. Modifications applicable to the RNA inhibitors of the present application include all types of modifications disclosed in the present invention or known in the art.
- nucleotide sequence generally refers to a series or a certain order of nucleotides, whether modified or unmodified, using standard nucleotide nomenclature and the symbol table of modified nucleotides described in this application as a series of letters.
- the nucleotide sequence described in this application is a polymer composed of phosphodiester bonds (or its related structural variants or synthetic analogs), including naturally occurring nucleotide polymers, but it should be understood that the scope of the term also includes various analogs, including but not limited to: peptide nucleic acids (PNA), aminophosphoroesters, thiophosphates, methylphosphonates and 2'-O-methyl ribonucleic acids, etc. There are usually about 15-30 nucleotides, but the term can also refer to molecules of any length.
- the nucleotide sequence comprises one or more unmodified ribonucleosides (RNA) and/or unmodified deoxyribonucleosides (DNA) and/or one or more modified nucleotides.
- modified nucleotide sequence generally means a series or a certain order of nucleotides comprising at least one modification and/or at least one modified internucleotide linkage.
- modified nucleotides generally means comprising at least one chemical modification compared to naturally occurring RNA or DNA nucleotides.
- 2'-deoxy-thymidylic acid 2'-O-methyl modified nucleotides, 2'-fluoro-modified nucleotides, 2'-deoxy-modified nucleotides, locked nucleotides, abasic nucleotides, 2'-amino-modified nucleotides, 2'-O-long chain alkyl-modified nucleotides (such as hexadecyl), morpholino nucleotides, phosphoramidate nucleotides, non-natural core base nucleotides, 5'-phosphorothioate nucleotides, and nucleotides connected with cholesterol derivatives or dodecanoic acid didecylamide groups.
- Modified nucleotides contain modified sugar groups and/or modified nucleobases.
- nucleobase or “base” generally refers to a heterocyclic pyrimidine or purine compound, which is a component of all nucleic acids and includes adenine, guanine, cytosine, thymine and uracil. Nucleotides can include modified nucleotides or nucleotide mimetics, abasics or surrogate replacement parts.
- unmodified nucleobase or “naturally occurring nucleobase” generally refers to the naturally occurring heterocyclic nucleobases of RNA or DNA: the purine bases adenine and guanine; and the pyrimidine bases thymine, cytosine and uracil.
- Modified nucleobase generally refers to any nucleobase that is not a naturally occurring nucleobase.
- sugar generally refers to a naturally occurring sugar or a modified sugar of a nucleotide.
- naturally occurring sugar generally refers to a furanose ribosyl as found in naturally occurring RNA or a deoxyfuranose ribosyl as found in naturally occurring DNA.
- Modified sugar refers to a substituted sugar or sugar surrogate, for example, a fluoro or methoxy substitution at the 2' position of the sugar.
- internucleotide linkage generally means a covalent linkage between adjacent nucleotides in a nucleotide sequence.
- Naturalally occurring internucleotide linkage means a 3' to 5' phosphodiester linkage.
- Modified internucleotide linkage means any internucleotide linkage other than a naturally occurring internucleotide linkage.
- AS antisense strand
- RNA inhibitor e.g., dsRNA
- region of complementarity generally refers to a region on the antisense strand that is substantially complementary to a sequence defined in the present application (e.g., a target sequence).
- the term "sense strand” generally refers to a strand of an RNA inhibitor (e.g., dsRNA) that includes a region that is substantially complementary to the region of an "antisense strand” (AS).
- the "sense" strand is sometimes referred to as a “sense” strand, a “passenger” strand, or an "anti-guide” strand.
- the antisense strand targets the desired mRNA, while the sense strand may target different targets or be degraded. Therefore, if the antisense strand is incorporated into RISC, the correct target is targeted.
- the incorporation of the sense strand can result in off-target effects. These off-target effects can be limited by using modifications or using 5' end caps on the sense strand.
- the loading of the siRNA double strand into the ago protein must first be initiated by the recognition of the 5' end of the antisense strand, which is a prerequisite for placing the rest of the double strand into the AGO protein and nucleic acid binding channel.
- the MID domain of the AGO protein recognizes the nucleotide at the 5' end.
- the siRNA double strand is loaded into the AGO protein and nucleic acid binding channel to form pre-RISC.
- pre-RISC discharges the sense strand (passenger strand) and forms RISC with the remaining antisense strand (guide strand).
- the term “complementary” refers to the ability of two nucleotide sequences to hybridize under certain conditions, form base pair hydrogen bonds, and form a duplex or double helix structure.
- the antisense strand of an RNA inhibitor hybridizes with the sense strand of an RNA inhibitor or the complement system mRNA to form Watson-Crick base pairs or non-Watson-Crick base pairs, and includes natural or modified nucleotides or nucleotide mimetics.
- “Complementary” does not necessarily have nucleobase complementarity on each nucleoside. On the contrary, some mismatches can be tolerated.
- mismatch refers to when the complementary region is not completely complementary to the target sequence, and the mismatch can be in the core region or the terminal region. Usually, the most tolerated mismatch is in the terminal region, for example, within 5, 4, 3 or 2 nucleotides of the 5' end and/or the 3' end, and no more than 3 mismatches.
- the term "ligand” generally refers to any compound or molecule that can covalently or otherwise chemically bind to a biologically active substance (such as dsRNA).
- the ligand can interact directly or indirectly with another compound such as a receptor, and the receptor that interacts with the ligand can be present on the cell surface, or alternatively can be an intracellular and/or intercellular receptor, and the interaction of the ligand with the receptor can result in a biochemical reaction, or can be simply a physical interaction or binding.
- the term "pharmaceutically acceptable” generally refers to one or more non-toxic substances that do not inhibit the effectiveness of the biological activity of the active ingredient.
- Such preparations may generally contain salts, excipients, buffers, preservatives, compatible carriers and optional other therapeutic agents.
- Such pharmaceutically acceptable preparations may also generally contain compatible solid or liquid fillers, diluents or encapsulation materials suitable for administration to people.
- salts should be pharmaceutically acceptable salts, but non-pharmaceutically acceptable salts can be conveniently used to prepare pharmaceutically acceptable salts, and they cannot be excluded from the scope of this application.
- Such pharmacological and pharmaceutically acceptable salts include, but are not limited to, salts prepared from the following acids: hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, maleic acid, acetic acid, salicylic acid, citric acid, boric acid, formic acid, malonic acid, succinic acid, etc.
- Pharmaceutically acceptable salts may also be prepared into alkali metal salts or alkaline earth metal salts, such as sodium salts, potassium salts or calcium salts.
- lipid nanoparticle generally refers to a vesicle comprising a lipid layer encapsulating a pharmacologically active molecule (e.g., dsRNA).
- LNP is described in, for example, Chinese Patent No. CN103189057B, the entire contents of which are incorporated herein by reference.
- a group of siRNAs targeting human complement system genes were screened using self-designed sequence screening software: CFB human: GenBank NM_001710.5; C3 human: GenBank NM_000064.4; C5 human: GenBank NM_001735.3.
- the primary sequence selected by CFB is shown in Table 1-1, and the primary sequence selected by C5 is shown in Table 1-2:
- the modified secondary sequences selected by CFB are shown in Table 2-1, the secondary sequences selected by C5 are shown in Table 2-2, and the secondary sequences selected by C3 are shown in Table 2-3:
- siRNA Synthesis siRNA was synthesized and annealed using conventional methods known in the art.
- the duplex structure (complementary region) formed by the antisense strand and the sense strand comprises at least 12, 13, 14, 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides.
- n is a or u or g or c
- g guanylate
- a adenylate
- u uridylate
- c cytidine
- t thymidine deoxyribonucleotide
- the sense strand and antisense strand of the RNAi agent are selected from the sequences in Table 1 or differ from each sequence in Table 1 by one, two or three nucleotides.
- the base pairs of the sense strand in Table 1 and the corresponding antisense strand in Table 1 are complementary to form dsRNA, which may be partially complementary or completely complementary.
- the partial complementarity may be at least 85% base pairing.
- the combination of the sense strand and the antisense strand is not limited to the double-strand combination in Table 1, and one of the sense strands in Table 1 can be complementary to any antisense strand.
- the present invention aims to protect the core sequence of the sequence in Table 1, and the core sequence is any segment of the above sequence that is at least 15 consecutive nucleotides, wherein at least 15 refers to 15, 16, 17, 18, 19, 20, 21, 22, 23, etc.
- the sense strand is as shown in formula (1): 5'-X core sequence Y-3', the antisense strand and the sense strand have at least 85% base complementarity, X and Y contain 0, 1, 2, 3, 4, 5, 6 nucleotides, and 0, 1, 2, 3 unpaired bases can be allowed to exist at the terminal position in the double strand.
- the antisense strand contains consecutive nucleotides that differ from formula (2) by 0, 1, 2 or 3 nucleotides, formula (2): 5′-X′ core sequence Y′-3′, the antisense strand and the sense strand have at least 85% base complementarity, X′ and Y′ contain 0, 1, 2, 3, 4, 5, or 6 nucleotides, and 0, 1, 2, or 3 unpaired bases can be allowed to exist at the terminal positions in the double helix.
- the core sequence allows 0, 1, 2, or 3 nucleotide differences, which may be base pairs formed according to the Watson-Crick principle or mismatches.
- the RNA inhibitor can be added to the cell line for sequence screening by cell transfection or liposome-nucleic acid nanoparticles, which are well known to those skilled in the art.
- Patents US9233971B2, US9080186B2, CN102985548B and CN103189057B on lipid compounds and methods for preparing liposome-nucleic acid nanoparticles are fully introduced into this specification.
- amphoteric lipids in the lipid compound are preferably macrocyclic lipid compounds D1C1, T1C1, T1C6, T4C4, B2C1, B2C6, B2C7 and M10C1.
- dsRNAs having a duplex structure of about 20 to 23 base pairs, for example, 21 base pairs have been found to be particularly effective in inducing RNA inhibition (Elbashir et al., EMBO 2001, 20: 6877-6888). However, others have found that shorter or longer RNA duplex structures are also effective (Chu and Rana (2007) RNA 14: 1714-1719; Kim et al. (2005) Nat Biotech 23: 222-226). It is reasonable to expect that a duplex with a few nucleotides minus or added at one or both ends of a sequence in Tables 1 and 2 can be similarly effective compared to the dsRNA.
- dsRNAs having a sequence of at least 15, 16, 17, 18, 19, 20, 21 or more consecutive nucleotides derived from a sequence in Tables 1 and 2 and differing by no more than about 5, 10, 15, 20, 25 or 30% in their ability to inhibit complement system gene expression from a dsRNA comprising the entire sequence are included within the scope of the present application.
- the dsRNA described in the present application may further include one or more single-stranded nucleotide overhangs, for example, 1, 2, 3 or 4 nucleotides.
- the nucleotide overhangs may include nucleotides/nucleoside analogs or combinations thereof, including deoxynucleotides.
- the overhangs may be on the sense strand, the antisense strand or a combination thereof.
- the nucleotides of the overhangs may be present at the 5' end, 3' end or both ends of the antisense strand or sense strand of the dsRNA.
- the overhangs may be formed by one strand being longer than the other strand, or by two strands of the same length being staggered.
- the overhangs are in the antisense strand and may form mismatches or complementarity with the complement system mRNA or may be another sequence.
- the overhangs are located at the 3' end of the sense strand, or alternatively, at the 3' end of the antisense strand.
- the dsRNA may also have a blunt end, which means that there are no unpaired nucleotides at that end of the dsRNA, i.e., no nucleotide overhangs.
- the blunt end may be located at the 5' end of the antisense strand and the 3' end of the sense strand, or vice versa, or a double-ended blunt end, which is a double-stranded dsRNA over its entire length, i.e., there are no nucleotide overhangs at either end of the molecule.
- the sense strand or antisense strand of the dsRNA has a nucleotide overhang at the 3' end, the overhang contains 1, 2, 3 or 4 nucleotides, and the 5' end is blunt.
- the overhang is present at the 3' end of both the sense strand and the antisense strand, and the overhang contains 1, 2, 3 or 4 nucleotides, including but not limited to: TT, UU, AU or UA.
- the dsRNA is a double-ended blunt-ended dsRNA of 19, 21, or 23 nucleotides in length, which is double-stranded throughout its entire length, ie, there are no nucleotide overhangs at either end of the molecule.
- the dsRNA is 21 nucleotides in length, and both the sense and antisense strands have 2 nucleotide overhangs at the 3' end.
- the sense strand and antisense strand of the RNA inhibitor may be modified without affecting its activity or even enhancing its activity, wherein the nucleotides may have a modifying group, and the entire strand or a portion thereof may be modified.
- one or more nucleotides on the sense strand and/or antisense strand are modified to form modified nucleotides.
- the sense strand and antisense strand of the RNA inhibitor (e.g., dsRNA) described herein are unmodified.
- the sense strand and antisense strand of the RNA inhibitor described herein are chemically modified or coupled as known in the art and as described herein to enhance stability or other favorable properties.
- all or substantially all nucleotides of the RNA inhibitor described herein may be modified, i.e., the strand of the RNA inhibitor has no more than 5, 4, 3, 2 or 1 unmodified nucleotides.
- the sense strand and antisense strand of the RNA inhibitor as described in the present application can be synthesized and/or modified by methods known in the art, such as those described in "Current protocols in nucleic acid chemistry", Beaucage, S.L. et al. (eds.), John Wiley & Sons, Inc., New York, NY, USA, which is incorporated by reference into the present invention.
- the sense strand and antisense strand of the RNA inhibitor do not need to be uniformly modified, and one or more modifications can be incorporated into their single nucleotides.
- nucleotide modifications include: 5' terminal modified nucleotides, 3' terminal modified nucleotides, base modifications, sugar modifications or sugar substitutions, and backbone modifications.
- 5' terminal modifications refer to phosphorylation, coupling, and reverse connection.
- 3' terminal modifications refer to coupling, DNA nucleotides, reverse connection, etc.;
- base modifications refer to: replacement with stable bases, destabilizing bases, or bases that pair with an extended partner library, removal of bases (basic nucleotides), or conjugated bases.
- Sugar modifications are generally at the 2' position or the 4' position.
- Main chain modifications refer to: modification or substitution of phosphodiester bonds.
- nucleotide modifications may include, but are not limited to, 5'-terminal phosphorus-containing nucleotide modifications, vinylphosphonate deoxyribonucleotides, vinylphosphonate-containing nucleotides and cyclopropylphosphonate-containing nucleotides, 3'-terminal deoxythymine (dT) nucleotides, 2'-O-methyl modified nucleotides, 2'-fluoro modified nucleotides, 2'-deoxy modified nucleotides, 2'-amino modified nucleotides, 2'-O-allyl modified nucleotides, 2'-C-alkyl modified nucleotides, 2'-hydroxy modified nucleotides, 2'-methoxyethyl modified nucleotides, 2'-O-alkyl modified nucleotides, 2-O-(N-methylacetamide) modified nucleotides, 3'-O-methoxy (2' internucleoside linkage)
- the 5'-terminal phosphorus-containing group modified nucleotide can be a 5'-phosphate nucleotide or a nucleotide deoxynucleotide containing a 5'-phosphate analog; having, but not limited to: 5'-terminal phosphate (5'-P), 5'-terminal phosphorothioate (5'-PS), 5-'-terminal phosphorothioate diester (5'-PS2), 5'-terminal vinyl phosphonate (5'-VP), 5'-terminal methyl phosphonate (MePhos) or 5'-deoxy-5'-C-malonyl.
- 5'-P 5'-terminal phosphate nucleotide
- nucleotide deoxynucleotide containing a 5'-phosphate analog having, but not limited to: 5'-terminal phosphate (5'-P), 5'-terminal phosphorothioate (5'-PS), 5-'-terminal phosphoroth
- 5'-terminal phosphorus-containing group is 5'-terminal vinyl phosphonate (5'-VP)
- 5'-VP can be a 5'-E-VP isomer (i.e., trans-vinyl phosphonate), a 5'-Z-VP isomer (i.e., cis-vinyl phosphate) or a mixture thereof.
- Modifications between nucleotides may include, but are not limited to, phosphorothioates, chiral phosphorothioates, phosphorodithioates, phosphotriesters, aminoalkylphosphotriesters, alkyl phosphonates, phosphinates, phosphoramidates, thiocarbonylphosphoramidates, thiocarbonylalkylphosphonates, thiocarbonylalkylphosphotriesters, boranephosphates, and also include various salts and free acids.
- the end modification of the sense strand or antisense strand can avoid exonuclease degradation and enhance nuclease stability, such as the cap structure: inverted deoxy abasic cap (inverted deoxy abasic cap), abbreviated as invAb.
- invAb inverted deoxy abasic cap (inverted deoxy abasic cap), abbreviated as invAb. invAb is well known in the art, and the specific performance verification can be found in F. Czauderna, Nucleic Acids Res., 2003, 31(11), 2705-16.
- the 2' position of the nucleotide sugar moiety at at least two or more even-numbered positions starting from the 5' end of the antisense strand is fluorine.
- all 2' positions of the nucleotide sugars at the even-numbered positions starting from the 5' end of the antisense strand are fluorine.
- At least one of the 2' positions of the nucleotide sugars at positions 2, 4, 6, 8, 12, and 14 starting from the 5' end of the antisense strand is fluorine.
- the 2' positions of the nucleotide sugars at positions 2, 4, 6, 8, 12, and 14 starting from the 5' end of the antisense strand are all fluorine.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- At least two or more nucleotide sugar groups at odd-numbered positions starting from the 5' end of the sense strand have fluorine at the 2' position.
- the 2' positions of the nucleotide sugars at the odd-numbered positions starting from the 5' end of the sense strand are all fluorine.
- At least one of the 2' positions of the 5th, 7th, 8th, and 9th nucleotide sugars starting from the 5' end of the sense strand is fluorine.
- the 2' positions of the 5th, 7th, 8th, and 9th nucleotide sugars starting from the 5' end of the sense strand are all fluorine.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- At least one of the 2' positions of the sugar moieties at positions 7, 9, 10, and 11 starting from the 5' end of the sense strand is fluorine.
- the 2' positions of the sugar moieties at positions 7, 9, 10, and 11 starting from the 5' end of the sense strand are all fluorine.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- At least one of the 2' positions of the nucleotide sugars at positions 3, 5, 7, 9, 10, 11, 13, and 15 starting from the 5' end of the sense strand is fluorine.
- the 2' positions of the nucleotide sugars at positions 3, 5, 7, 9, 10, 11, 13, and 15 starting from the 5' end of the sense strand are all fluorine.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- At least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
- the -OH at the 2' position of some or all of the nucleotide sugar groups of the sense strand and/or antisense strand can be substituted, wherein the substituent group is fluorine or methoxy, preferably the 2' position of the nucleotide sugar groups at positions 9, 10, and 11 from the 5' end of the sense strand is fluorine, and the 2' position of the nucleotide sugar groups at positions 2, 4, 6, 12, 14, 16, 18, and 20 from the 5' end of the antisense strand is fluorine, and the 2' positions of the remaining nucleotide sugar groups are all methoxy, or preferably the 2' position of the nucleotides at positions 5, 7, 8, and 9 from the 5' end of the sense strand is fluorine, and the 2' position of the nucleotide sugar groups at positions 2, 4, 8, 14, and 16 from the 5' end of the antisense strand is fluorine, and the 2' positions of the remaining nucleotide sugar groups are all methoxy.
- At least two consecutive phosphorothioate bonds exist between three consecutive nucleotides at at least one end of the sense strand end and/or the antisense strand end.
- the 2' position of the nucleotide sugar group at positions 9, 10, and 11 from the 5' end of the sense strand is fluorine
- the 2' position of the nucleotide sugar group at positions 2, 4, 6, 12, 14, 16, 18, and 20 from the 5' end of the antisense strand is fluorine
- the 2' position of the remaining nucleotide sugar groups are all methoxy, and there are at least two consecutive phosphorothioate bonds between three consecutive nucleotides at the 5' and 3' ends of the sense and antisense strands.
- the 2' position of some nucleotides of the sense strand is fluorine or methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated.
- the 2' position of the 5th, 7th, 8th, 9th or the 3rd, 5th, 7th, 8th, 9th, 11th, 13th, 15th nucleotides starting from the 5' end of the sense strand is fluorine, and the 2' position of the remaining nucleotides is methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated.
- the 2' position of some nucleotides of the sense strand is fluorine or methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated.
- the 2' position of the 9th, 10th, 11th or the 3rd, 5th, 7th, 8th, 9th, 11th, 13th, 15th and/or 17th nucleotides starting from the 5' end of the sense strand is fluorine, and the 2' position of the remaining nucleotides is methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated.
- the RNA inhibitor of the CFB modified sequence of the present invention is selected from the following Table 2-1
- the RNA inhibitor of the C5 modified sequence is selected from the following Table 2-2
- the RNA inhibitor of the C3 modified sequence is selected from the following Table 2-3:
- G 2'-O-methylguanylate
- A 2'-O-methyladenylate
- U 2'-O-methyluridylate
- C 2'-O-methylcytidine
- Gs 2'-O-methyl-3'-thioguanylate
- As 2'-O-methyl-3'-thioadenylate
- Us 2'-O-methyl-3'-thiouridylate
- Ts 2'-O-methyl-3'-thiothymidylate
- Cs 2'-O-methyl-3'-thiocytidine
- fG 2'-fluoroguanylate
- fA 2'-fluoroadenylate
- fC 2'-fluorocytidine
- fT 2'-fluorothymidine
- fGs 2'-fluoro-3'-thioguanylate, fA
- the sense strand or antisense strand of the RNA inhibitor described in the present invention has a sequence of at least 15 consecutive nucleotides identical to the sense strand or antisense strand in Tables 1 to 2, or a sequence that differs by one, two or three nucleotides.
- the distribution, targeting or stability of the RNA inhibitor is altered by introducing a ligand for a target tissue receptor into the vector.
- a specific ligand can provide enhanced affinity for a selected target (e.g., a molecule, a cell or cell type, a compartment (e.g., a cell or organ compartment, a body tissue, an organ or region)) compared to a species in which the ligand is not present.
- the ligand can include naturally occurring substances, such as proteins (e.g., human serum albumin (HSA), low-density lipoprotein (LDL) or globulin); carbohydrates (e.g., dextran, pullulan, chitin, chitosan, inulin, cyclodextrin, N-acetylglucosamine, N-acetylgalactosamine or hyaluronic acid); or lipids.
- the ligand can also be a recombinant or synthetic molecule, such as a synthetic polymer, for example a synthetic polyamino acid.
- the ligand can also include a targeting group, such as a cell or tissue targeting agent that is combined with a specified cell type such as a kidney cell, such as a lectin, a glycoprotein, a lipid or a protein, such as an antibody.
- a targeting group such as a cell or tissue targeting agent that is combined with a specified cell type such as a kidney cell, such as a lectin, a glycoprotein, a lipid or a protein, such as an antibody.
- the targeting group can be thyrotropin, melanocyte stimulating hormone, a lectin, a glycoprotein, a surfactant protein A, a mucin carbohydrate, a multivalent lactose, a multivalent galactose, N-acetyl-galactosamine, N-acetyl-glucosamine multivalent mannose, a multivalent fucose, a glycosylated polyamino acid, a multivalent galactose, transferrin, a bisphosphonate, polyglutamic acid, polyaspartic acid, a lipid, cholesterol, a steroid, bile acid, folic acid, vitamin B12, vitamin A, biotin, or an RGD peptide or RGD peptide mimetic.
- the ligand is a multivalent galactose, such as N-acetyl-galactosamine.
- the sense strand and antisense strand contained in the RNA inhibitor of the present invention can be conveniently and routinely prepared by the well-known technique of solid phase synthesis. Any other method known in the art for such synthesis, such as liquid phase synthesis or fermentation, can be used additionally or alternatively.
- the sense strand and antisense strand contained in the RNA inhibitor of the present application can be synthesized by an automatic synthesizer using a phosphoramidite method derived from a carrier-nucleoside phosphoramidite monomer.
- the ligand described in the present invention is coupled to the 5' end and/or 3' end of the antisense chain, and/or the 5' end and/or 3' end of the sense chain through a carrier structure.
- the carrier structure can be coupled to the 5' end and/or the 3' end of the sense strand; or the carrier structure can be coupled to the 5' end of the antisense strand and the carrier structure can be coupled to the 3' end of the sense strand; or the carrier structure can be coupled to the 3' end of the antisense strand and the ligand can be coupled to the 5' end of the sense strand.
- the carrier structure includes 5'MVIP and 3'MVIP, wherein the 5'MVIP is coupled to the 5' end of the sense strand and/or the antisense strand, and the 3'MVIP is coupled to the 3' end of the antisense strand and/or the sense strand, the structure of the 5'MVIP is as shown in Formula I, and the structure of the 3'MVIP is as shown in Formula II.
- X is a liver-targeting specific ligand
- L is a branched chain
- R 1 and R 2 are transfer points
- the 5'MVIP is connected to the 5' end of the sense strand or the 5' end of the antisense strand through the transfer point R1
- the 3'MVIP is connected to the 3 ' end of the sense strand or the 3' end of the antisense strand through the transfer point R2
- connection between R 1 or R 2 and the sense strand or antisense strand is through phosphate or modified phosphate, and R 1 or R 2 is preferably connected to the sense strand or antisense strand through phosphate or phosphorothioate.
- m or n may be 0, i.e., there is no 3'MVIP or 5'MVIP.
- the structure of the 3'MVIP may be:
- the structure of the 3'MVIP may be:
- the structure of the 3'MVIP may be:
- the structure of the 3'MVIP may be:
- the structure of the 3'MVIP may be:
- the n refers to the sum of the n placed in the 5'MVIP at the 5' end of the sense strand and the antisense strand of the RNA inhibitor
- the m refers to the sum of the m placed in the 3'MVIP at the 3' end of the sense strand and the antisense strand of the RNA inhibitor.
- the R1 and R2 structures contain -NH-, -S- and/or -O-, and R1 and R2 are connected to the connecting chain D and the 5' end and 3' end of the sense chain and/or antisense chain respectively through the -NH-, -S- or -O- in the structure, and R1 and R2 are the same or different.
- R1 and R2 are optionally straight carbon chains, or straight carbon chains with amide, carboxyl or alkyl branches, or cyclic structures, wherein the cyclic structure includes a saturated or unsaturated aliphatic carbocyclic group, or a five-membered or six-membered heterocyclic group or aromatic hydrocarbon group containing sulfur, oxygen or nitrogen atoms.
- R 1 and/or R 2 is -E 1 (CH 2 ) x CH 2 E 2 -, wherein x is any integer from 3 to 12, and the groups E 1 and E 2 can be -NH-, -S- or -O-, respectively.
- R1 and/or R2 is -E1 ( CH2 ) x1CH (OH)( CH2 ) x2E2- , wherein x1 or x2 is each independently any integer from 3 to 10, and E1 and E2 can be -NH-, -S- or -O-, respectively.
- the R 1 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
- the transition point R1 is -NH( CH2 ) xCH2O- , wherein x is any integer from 3 to 12, preferably any integer from 4 to 6, and can be introduced by the following two phosphoramidite monomers.
- One -O- or -S- in the iR 1 structure is used for the synthesis of the R 1 phosphoramidite monomer, which is connected to the 5' end of the sense chain or antisense chain of the RNA inhibitor by solid phase synthesis.
- the -NH-, -S- or -O- in the structure is used to connect with the connecting chain D in the 5'MVIP, thereby introducing the liver-targeting specific ligand X at the 5' end of the sense chain or antisense chain in the RNA inhibitor.
- the exemplary structure of the monomer introduced into the 5' end of the sense chain or antisense chain of the RNA inhibitor is as follows:
- One -NH-, -S- or -O- in the R1 structure is first connected to the connecting chain D, and the other -NH-, -S- or -O- is used to form an ester with the phosphoramidite in the synthesis of the 5'MVIP phosphoramidite monomer.
- the structure of the sense chain or antisense chain 5'MVIP phosphoramidite monomer is exemplified as follows:
- the 5'MVIP phosphoramidite monomer of the sense strand or antisense strand preferably has the following structure:
- the linker B part in the monomer is branched 1 to 4 times to obtain the corresponding monomer compound.
- the liver-targeting specific ligand X is introduced into the 5' end of the sense chain or the antisense chain through solid phase synthesis.
- the transition point R1 is -NH( CH2 ) xCH2O- , wherein x can be any integer from 3 to 12 , preferably any integer from 4 to 6.
- the 5'MVIP phosphoramidite monomer structure is selected from the following structures:
- the transition point R2 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
- the transition point R2 is -NH( CH2 ) x1CH (OH)( CH2 ) x2CH2O- , wherein x1 is any integer from 1 to 4, and x2 is any integer from 0 to 4.
- the transfer point R2 described in the present application is formed by esterification or amide formation between succinic anhydride and -NH-, -S- or -O- in the R2 structure, and at the same time, coupling with -NH- in the blank Solid Support to form a 3'MVIP solid spport, and then introducing 3'MVIP into the 3' end of the sense chain or antisense chain through the phosphoramidite solid phase synthesis method.
- the heterocyclic ring in the transition point R2 structure is a pyrrole ring or a piperidine ring, which is connected to the connecting chain D of 3'MVIP through the nitrogen heteroatom in the ring.
- the exemplary structure of the introduced 3'MVIP solid spport is as follows:
- the connector B part in the monomer is branched 1 to 4 times to obtain the corresponding Solid Support.
- the transition point R2 is -B4 ( CH2 ) x1CH (OH)( CH2 ) x2CH2B5- , wherein x1 is any integer from 1 to 4 , x2 is any integer from 0 to 4, B4 and B5 are -NH-, -S- or -O-, respectively, and the exemplary structure of the introduced 3'MVIP solid spport is as follows:
- the connector B part in the monomer is branched 1 to 4 times to obtain the corresponding Solid Support.
- R 2 is -NHCH 2 CH(OH)CH 2 O-, and the exemplary structure of the introduced 3'MVIP solid spport is as follows:
- the connector B part in the monomer is branched 1 to 4 times to obtain the corresponding Solid Support.
- the 3'MVIP solid support structure is as follows:
- the liver-targeting specific ligand X is selected from structures used to enhance the uptake of RNA inhibitors by hepatocytes, and may be lipids, steroids, vitamins, sugars, proteins, peptides, polyamines, and peptide mimetic structures.
- the liver-targeting specific ligands X introduced into the ends of the sense strand or antisense strand of the RNA inhibitor may be the same or different.
- some may be structures that enhance liver targeting, some may be structures that regulate the pharmacokinetics of the RNA inhibitor in vivo, and some may be structures that have in vivo dissolution activity.
- the liver-targeting specific ligand X is selected from one or more monosaccharides and their derivatives in the following structures.
- the monosaccharide is selected from one or more of the following structures: mannose, galactose, D-arabinose, glucose, fructose, xylose, glucosamine, ribose.
- the monosaccharide derivative is selected from mannose derivatives, galactose derivatives, glucose derivatives, ribose derivatives and other derivatives.
- the liver-targeting specific ligand X is selected from galactose, galactosamine, N-acetylgalactosamine and derivatives thereof, and its general structural formula is as follows:
- W1 is hydrogen or a hydroxyl protecting group, which may be the same or different; W is -OH, -NHCOOH or -NHCO( CH2 ) qCH3 , wherein q is an integer of 0-4; W2 is -NH-, O, S or C.
- the liver-targeting specific ligand X is N-acetylgalactosamine and its derivatives.
- liver-targeting specific ligand X is selected from the following structures:
- W is selected from one or two of -OH, -NHCOOH or -NHCO(CH 2 ) q CH 3 , wherein q is an integer of 0-4.
- the liver-targeting specific ligand X in the same 5'MVIP or 3'MVIP structure may be the same or different.
- X between 5'MVIP and 3'MVIP may be the same or different.
- the branched chain L further has a hydroxyethyl group or a carboxylic acid side chain.
- the branched chain L is a C 7 -C 18 carbon chain containing an amide group or a six-membered aliphatic carbocyclic group.
- the side chain L is selected from one or more of the following structures:
- r1 is any integer of 1-12
- r2 is any integer of 0-20
- Z is H, an alkyl group or an amide group, and the alkyl group is, for example, a C 1 -C 5 alkyl group.
- the structure of the linker B is related to the number of Xs that can be introduced.
- the linker B contains -NH-, C, O, S, amide, phosphoryl, thiophosphoryl, and when n or m is 1, it is a straight carbon chain. When n or m is 2, 3 or 4, the number of forks is 2, 3 or 4, respectively.
- the linker B is selected from the following structures:
- A1 and A2 are each independently C, O, S, -NH-, carbonyl, amide, phosphoryl or thiophosphoryl, and r is an integer of 0-4.
- the linker B is selected from the following structures:
- r is any integer from 0 to 4.
- the linker B is selected from the following structures:
- the linker B is selected from the following structures:
- the connecting chain D further has a side chain of a hydroxymethyl group, a methyl tert-butyl group, a methylphenol group, or a C 5 -C 6 aliphatic ring group.
- the connecting chain D is a C 3 -C 10 carbon chain containing two C ⁇ O groups, a six-membered aliphatic carbocyclic group, or a phenyl group.
- the connecting chain D is a C 3 -C 10 carbon chain containing two C ⁇ O groups.
- the connecting chain D is selected from the following structures:
- the connecting chain D is selected from the following structures:
- the connecting chain D is selected from the following structures:
- the (XL) n -BD- in the 5'MVIP structure and the (XL) m -BD- in the 3'MVIP structure are selected from one or more of the following structures:
- the X, L, B and D are the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP.
- the (XL) n -BD- in the 5'MVIP structure is selected from the structures shown in Table 3:
- 5'MVIP may not exist, in which case m can be any integer from 2 to 4.
- the (XL) m -BD- in the 3'MVIP structure is selected from the structures shown in Table 4:
- the combination of (XL) n -BD- and R 1 in the carrier structure 5′MVIP is as shown in Table 5.
- 3'MVIP may not exist, in which case n may be any integer from 2 to 4.
- the combination of (XL) m -BD- and R 2 in the carrier structure 3'MVIP is as shown in Table 6.
- the 5’MVIP is selected from any one or more of 5’MVIP01 to 5’MVIP22 in Table 5.
- the 3’MVIP is selected from any one or more of 3’MVIP01 to 3’MVIP27 in Table 6.
- the sense strand and antisense strand coupled to the carrier in the CFB RNA inhibitor can be selected from the following Table 7-1
- the sense strand and antisense strand coupled to the carrier in the C5 RNA inhibitor can be selected from the following Table 7-2
- the sense strand and antisense strand coupled to the carrier in the C3 RNA inhibitor can be selected from the following Table 7-3:
- the sense strand and antisense strand of the RNA inhibitor described in the present application have a sequence of at least 15 consecutive nucleotides that are the same as the sense strand and antisense strand in Table 7, or a sequence that differs from the sense strand and antisense strand in Table 7 by one, two or three nucleotides.
- the combination of the sense chain and the antisense chain is not limited to the double-strand combination in Table 7.
- One of the sense chains in Table 7 can be complementary to any antisense chain; for example, GsUsCUAGfUCfAfAfCUUAAUUGAsGsA (SEQ ID NO: 554) in Table 7-1 can be complementary to UsfCsUfCAfAUfUAAGUUfGAfCUAGACsAsC (SEQ ID NO: 583), UsfCsUfCAfAUfUAAGUUfGAfCUAGsAsC (SEQ ID NO: 584), UsdCsUCdAATUAAGTUfGACUAGA CsAsC (SEQ ID NO: 588), UsfCsUCAfAUfUfAAGUUfGAfCUAGACsAsC (SEQ ID NO: 591), UsfCsUfCAfAUfUAAGUUfGAfCUAGACsAsCTT (SEQ ID NO: 593), and UsfC
- any sense strand or antisense strand of the present invention can be connected to carriers of different structures.
- the 5' end and/or 3' end of any sense strand or antisense strand of the present invention are connected to 5'MVIP and/or 3'MVIP of different structures, and the coupling combination is not limited.
- the double-stranded RNA inhibitor of the present invention can be optionally conjugated with one or more ligands, and the ligands can be applied to the double-stranded RNA inhibitor of the present invention as long as they can enhance the activity, cellular distribution or cellular uptake (e.g., entering cells) of the double-stranded RNA inhibitor.
- the ligand can be connected to the sense strand, antisense strand or both strands at the 3' end, 5' end or both ends.
- the carrier is not limited to the MVIP listed in the present invention, and may also include but is not limited to: GalNac carriers of any structure, cationic lipid carriers, viral vectors, lipophilic parts, amphiphilic parts, targeting groups, small molecule drugs, proteins, peptides, antibodies.
- the antisense strand of the RNA inhibitor described in the present invention has a sequence of at least 15 consecutive nucleotides identical to the antisense strand in Tables 1-2, or a sequence that differs from the antisense strand in Tables 1-2 by one, two or three nucleotides coupled to 5'MVIP and/or 3'MVIP.
- the double-stranded RNA inhibitor of the present invention can be optionally conjugated with one or more ligands, and the ligands can be applied to the double-stranded RNA inhibitor of the present invention as long as they can enhance the activity, cellular distribution or cellular uptake (e.g., entering cells) of the double-stranded RNA inhibitor.
- the ligand can be connected to the sense strand, antisense strand or both strands at the 3' end, 5' end or both ends.
- the carrier is not limited to the MVIP listed in the present invention, and may also include but is not limited to: GalNac carriers of any structure, cationic lipid carriers, viral vectors, lipophilic parts, amphiphilic parts, targeting groups, small molecule drugs, proteins, peptides, antibodies.
- Patent CN113171371B examines in detail the effects of different X, L, B, D, R1 and R2 in the 5'MVIP and/or 3'MVIP structures on the activity of RNA inhibitors, and the entire text of the patent is incorporated into the present invention.
- N-acetylgalactosamine and its derivatives are preferably used as liver-targeting specific ligands, as shown in Table 8:
- the length of L has a great influence on the effect of RNA inhibitors.
- the L chain should be neither too short nor too long.
- the activity of the obtained RNA inhibitors is not much different within the range of carbon chain length of C7-C18, as shown in Table 9.
- linker B except for the change in the structure of linker B, when X, L, D and R1 / R2 are consistent with those in the combination 5'MVIP09/3'MVIP09, A1 and A2 in the general formula of linker B are each independently C, O, S, -NH-, carbonyl, amide, phosphoryl or thiophosphoryl, r is any integer from 0 to 4, and when linker B is the same or different between 5'MVIP and 3'MVIP, the resulting RNA inhibitor activity is not much different.
- R1 will affect the activity of RNA inhibitors, among which R1-1 as the transfer point has the best RNA inhibitor activity.
- the structure of R1 is shown in Table 12.
- R2 will affect the activity of RNA inhibitors, among which R2-1 is the best RNA inhibitor when used as the transfer point.
- the R1 structure is shown in Table 13.
- n+m in the RNA inhibitor described in the present invention is 2, 3, 4, 5 and 6 respectively.
- the positions for coupling of 5'MVIP and/or 3'MVIP include the 5' end and/or 3' end of the antisense chain, the 5' end and/or 3' end of the sense chain, the 5' end of the antisense chain and the 3' end of the sense chain, and the 5' end of the sense chain and the 3' end of the antisense chain.
- n+m in the RNA inhibitor of the present invention is 2, 3, 4, 5 and 6 respectively.
- the positions of 5'MVIP and/or 3'MVIP coupling include the 5' end and/or 3' end of the antisense strand in Table 1-Table 2, the 5' end and/or 3' end of the sense strand in Table 1-Table 2, the 5' end of the antisense strand and the 3' end of the sense strand in Table 1-Table 2, and the 5' end of the sense strand and the 3' end of the antisense strand in Table 1-Table 2.
- the obtained 5'MVIP and 3'MVIP combinations are shown in Table 14:
- the RNA inhibitor described herein or a pharmaceutically acceptable salt thereof is preferably prepared or synthesized in the form of a sodium salt, a triethylamine salt or other pharmaceutically acceptable salts.
- the RNA inhibitor described herein or a pharmaceutically acceptable salt thereof is more preferably a sodium salt or a triethylamine salt thereof.
- the present application also provides a pharmaceutical composition comprising the RNA inhibitor or a pharmaceutically acceptable salt thereof.
- the present invention provides a pharmaceutical composition
- a pharmaceutical composition comprising the RNA inhibitor or a pharmaceutically acceptable salt thereof and an optional pharmaceutically acceptable excipient.
- the RNA inhibitor provided by the present invention or a pharmaceutically acceptable salt thereof is used in the preparation of a medicament for treating and/or preventing a disease associated with an elevated level of the complement system, including but not limited to lipid metabolism disorders.
- the complement system regulates the level of triglycerides in plasma by inhibiting the activity of LPL (hepatic lipase) in the liver and adipose tissue, limiting the release of fatty acids. It affects insulin resistance, fat metabolism and overall energy balance.
- Factors that may inhibit the expression of complement system mRNA in vivo and/or in vitro include PPAR ⁇ , statins, insulin, leptin, thyroid hormones and lipopolysaccharides, etc. 5-10; the inhibitors of the present invention can be used in combination with these drugs, and there is a prospect of further improving the therapeutic effect of lipid metabolism, sugar metabolism, cardiovascular disease, etc.
- compositions for systemic administration by parenteral delivery, for example, subcutaneous (SC), intramuscular (IM), or intravenous (IV) delivery.
- SC subcutaneous
- IM intramuscular
- IV intravenous
- the pharmaceutical compositions provided herein can be administered at a dose sufficient to inhibit complement system gene expression.
- a pharmaceutically acceptable "excipient” or “excipient” is a pharmaceutically acceptable solvent, suspending agent, or any other pharmaceutically inert vehicle for delivering one or more nucleic acids to an animal.
- Excipients can be liquid or solid and are selected taking into account the planned mode of administration to provide the desired volume, consistency, etc. when combined with the nucleic acid and other components in a given pharmaceutical composition.
- the RNA inhibitors described herein can be delivered in a manner that targets specific tissues (e.g., hepatocytes).
- the pharmaceutical composition of the present invention further comprises a delivery vehicle (such as nanoparticles, dendrimers, polymers, liposomes or cationic delivery systems).
- a delivery vehicle such as nanoparticles, dendrimers, polymers, liposomes or cationic delivery systems.
- the delivery vehicle described herein comprises a liposome.
- the delivery vehicle described herein includes nanolipids that can form liposome-nucleic acid nanoparticles with nucleic acid molecules.
- the delivery vehicle described herein comprises the amphiphilic lipid compound M10C1.
- compositions provided by the present invention include, but are not limited to, solutions, emulsions, and formulations containing liposomes. These compositions can be produced from a variety of components, including, but not limited to, preformed liquids, self-emulsifying solids, and self-emulsifying semisolids.
- the formulations include those targeted to the liver.
- the pharmaceutical formulations of the present application which can be conveniently presented in unit dosage form, can be prepared according to conventional techniques known to the pharmaceutical industry. Such techniques include the step of combining the active ingredient with a pharmaceutically acceptable adjuvant or excipient.
- the present application provides a method for reducing the expression of complement system mRNA or protein in cells or tissues, which comprises contacting the cells or tissues with an effective amount of the aforementioned RNA inhibitor that inhibits complement system gene expression or a pharmaceutically acceptable salt thereof, and/or the aforementioned pharmaceutical composition.
- Cells suitable for treatment using the methods of the present application may be any cells expressing complement system genes, for example, liver cells, brain cells, gallbladder cells, heart cells or kidney cells, but preferably liver cells.
- Cells suitable for use in the methods of the present application may be mammalian cells, and when contacted with cells expressing complement system genes, the RNA inhibitor inhibits the expression of complement system genes (e.g., human, primate, non-primate or rat complement system genes) by at least about 50%, for example, as determined by PCR or branched DNA (bDNA)-based methods, or by protein-based methods, such as immunofluorescence analysis, Western blotting or flow cytometry.
- complement system genes e.g., human, primate, non-primate or rat complement system genes
- the tissue is liver tissue.
- the cells and tissues are ex vivo.
- the cells and tissues are in a subject.
- the term “inhibit” can be used interchangeably with “reduce,” “lower,” “silence,” “downregulate,” “suppress,” and other similar terms, and includes any level of inhibition.
- the expression of complement system genes can be evaluated based on the level or level change of any variable related to the expression of complement system genes, for example, the level of complement system mRNA. This level can be analyzed in a single cell or in a cell population (including, for example, a sample derived from a subject).
- the control level can be any type of control level used in the art, for example, a baseline level before administration or a level measured from a similar subject, cell or sample that has not been treated or treated with a control (such as, for example, a buffer-only control or an inactive agent control).
- Inhibition of complement system gene expression can be manifested by a decrease in the amount of mRNA expressed by a first cell or cell population (such cells may, for example, be present in a sample derived from a subject) in which complement system genes are transcribed and have been treated (e.g., by contacting one or more cells with an RNA inhibitor of the present application, or by administering an RNA inhibitor of the present application to a subject in which the cells are present) such that expression of the complement system genes is inhibited, as compared to a second cell or cell population that is substantially identical to the first cell or cell population but has not been so treated (control cells that have not been treated with an RNA inhibitor or have not been treated with an RNA inhibitor targeting a gene of interest).
- the evaluation is performed by using appropriate concentrations of siRNA in cell lines that highly express the complement system, and the mRNA levels in the treated cells are expressed as a percentage of the mRNA levels in non-treated control cells.
- inhibition of complement system gene expression can be assessed by a reduction in a parameter functionally associated with complement system gene expression, e.g., complement system levels in the blood or serum of a subject.
- Complement system gene inhibition can be measured in any cell expressing the complement system (endogenous or exogenous from an expression construct) and by any assay known in the art.
- Inhibition of complement system expression can be manifested by a decrease in the level of complement system expressed by a cell or population of cells or a sample from a subject (eg, protein levels in a blood sample derived from a subject).
- Control cells, cell groups or subject samples that can be used to evaluate complement system gene inhibition include cells, cell groups or subject samples that have not been contacted with the RNA inhibitor of the present application.
- control cells, cell groups or subject samples can be derived from a single subject (e.g., a human or animal subject) or an appropriately matched population control before treatment with an RNA inhibitor.
- the level of complement system mRNA expressed by a cell or cell population can be determined by any method known in the art for evaluating mRNA expression. For example, qRT-PCR is used to evaluate the reduction of gene expression. The reduction of protein production can be evaluated by any method known in the art, for example, ELISA.
- a puncture liver biopsy sample is used as a tissue material for monitoring the reduction of complement system gene expression.
- a blood sample is used as a subject sample for monitoring the reduction of complement system expression.
- the present application provides the use of the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, or the aforementioned pharmaceutical composition in the preparation of a drug for preventing and/or treating a disease or condition or reducing the risk of a disease or condition.
- the present application provides a method for preventing and/or treating a disease or condition, comprising administering to a subject in need thereof an effective amount of the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, and/or the aforementioned pharmaceutical composition.
- the in vivo method of the present application may include administering to a subject a pharmaceutical composition comprising an RNA inhibitor, wherein the RNA inhibitor comprises a nucleotide sequence complementary to at least a portion of a complement system mRNA of a mammal to which the RNA inhibitor is administered.
- the pharmaceutical composition of the present invention may be administered in any manner known in the art, including, but not limited to: oral, intraperitoneal or parenteral routes, including intracranial (e.g., intraventricular, intracerebral parenchymal and intrathecal), intravenous, intramuscular, subcutaneous, transdermal, airway (aerosol), nasal, rectal and topical (including buccal and sublingual) administration.
- the pharmaceutical composition is administered by intravenous infusion or injection.
- the pharmaceutical composition is administered by subcutaneous injection.
- the composition is administered by intramuscular injection.
- RNA inhibitors provided herein can also be administered as "free RNA inhibitors". Free RNA inhibitors are administered in the absence of a pharmaceutical composition. Naked RNA inhibitors can be in a suitable buffer.
- the buffer can contain acetate, citrate, prolamin, carbonate or phosphate, or any combination thereof.
- the buffer is phosphate buffered saline (PBS). The pH and osmotic pressure of the buffer containing the RNA inhibitor can be adjusted so as to be suitable for administration to a subject.
- PBS phosphate buffered saline
- RNA inhibitors provided herein can be administered as a pharmaceutical composition, such as a liposomal formulation.
- the pharmaceutical composition provided herein can be administered at a dosage sufficient to inhibit complement system gene expression.
- the suitable dosage of the RNA inhibitor described herein is in the range of about 0.001 to about 200.0 mg per kilogram of subject body weight per day, typically in the range of about 1 to 50 mg per kilogram of body weight per day.
- the suitable dosage of the RNA inhibitor described herein is in the range of about 0.1 mg/kg to about 5.0 mg/kg, for example, in the range of about 0.3 mg/kg to about 3.0 mg/kg.
- the method further comprises determining the level of the complement system in a sample from the subject.
- the method further comprises determining the level of the complement system in a blood sample, a serum sample, or a urine sample from the subject.
- the present application provides a cell comprising the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof.
- the present application provides a drug kit comprising the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, or the aforementioned pharmaceutical composition.
- DMSO dimethyl sulfoxide
- the Chinese name of DMF is N,N-dimethylformamide
- HOBt 1-hydroxybenzotriazole
- HBTU O-benzotriazole-tetramethyluronium hexafluorophosphate
- DIPEA N,N-diisopropylethylamine
- the Chinese name of DCM is dichloromethane
- the Chinese name of DMAP is 4-dimethylaminopyridine
- DMT-CL 4,4'-dimethoxytriphenylmethane
- the Chinese name of MEOH is methanol
- the Chinese name of TBTU is O-benzotriazole-N,N,N',N'-tetramethyluronium tetrafluoroborate;
- solid phase carrier such as macroporous aminomethyl resin (Resin).
- the sense strand and antisense strand of the uncoupled carrier structure are synthesized by a standard solid phase phosphoramidite method using a multi-channel solid phase synthesizer, and then the sense strand is complementary annealed with the corresponding antisense strand to prepare the corresponding RNA inhibitor.
- the basic steps of the solid phase phosphoramidite method include:
- Oxidation oxidizing the obtained nucleoside phosphite to a more stable nucleoside phosphate (i.e., oxidizing trivalent phosphorus to pentavalent phosphorus);
- Blocking Cap the 5’-OH of the failed nucleotide sequence in the previous step to prevent it from further participating in the reaction; repeat the above steps until the last phosphoramidite monomer is connected; then use methylamine aqueous solution and ammonia water to cleave the ester bond between Solid Support and the starting monomer, and remove the protecting groups on each base and phosphate on the resulting nucleotide sequence; separate and purify by HPLC, filter and sterilize, and lyophilize to obtain the corresponding sense chain or antisense chain.
- RNA inhibitors of this example are selected from Table 1-1 and Table 1-2, and are prepared by the method described in Example 1.
- Hep3B and huh7 cells were digested with trypsin and adjusted to the appropriate density, then seeded into 96-well plates at a viable cell concentration of 0.2 ⁇ 10 6 cells/mL.
- cells were transfected with test siRNA or control siRNA using Lipofectamine RNAiMax (Invitrogen-13778150).
- siRNA was tested in triplicate at the following concentrations: 0.1nM, 0.02nM, 0.015nM, 0.001nM, 10nM, 1nM, 0.01nM, and a no siRNA control group and a positive control group containing only cells and RNAiMax were set up.
- the mRNA expression level of the target gene in the sample was calculated based on the Ct value of each sample using the ⁇ Ct relative quantification method, and the relative expression of the target gene was expressed as 2 - ⁇ Ct .
- ⁇ CT ⁇ CT (sample) - ⁇ CT (random control or Lipofectamine RNAiMax control);
- Inhibition % (relative quantification of control - relative quantification of sample) / relative quantification of control x 100%.
- RNA inhibitors of this example are shown in Tables 1-3. Plasmid DNA (C3_PSICHECK(TM)-2 plasmid) was transferred into Hep3B and Huh7 cells using Fugene HD. The transfected cells were inoculated into a 96-well plate at a density of 10,000 cells per well, and the culture medium in each well was 100 ⁇ L. The cells were placed in a 5% CO 2 , 37°C incubator and cultured overnight. Then the RNA inhibitor was prepared with PBS to prepare the RNA inhibitor sample solution of nanolipids of the corresponding concentration.
- C3_PSICHECK(TM)-2 plasmid Plasmid DNA (C3_PSICHECK(TM)-2 plasmid) was transferred into Hep3B and Huh7 cells using Fugene HD. The transfected cells were inoculated into a 96-well plate at a density of 10,000 cells per well, and the culture medium in each well was 100 ⁇ L. The cells were placed in a 5% CO 2
- RNAiMAX/Opti-MEM was added to each well at the corresponding position, and the RNA inhibitor sample solution diluted with the corresponding concentration was added to the well, mixed and incubated, and the incubated mixture was mixed evenly with DMEM containing 10% FBS.
- the culture medium in each well was aspirated, and then a new culture medium containing the sample was added. After adding, it was placed in a 5% CO 2 , 37°C incubator for culture, and the final concentration of the sample test was 0.01nM.
- the solid support of 3'MVIP is used as the starting monomer of solid phase synthesis.
- the 5' end of the sense strand or antisense strand of the RNA inhibitor of the present application is coupled with the carrier structure 5'MVIP, the 5'MVIP phosphoramidite monomer is used as the last monomer of solid phase synthesis.
- the connector B part in the general formula is branched 1 to 4 times to obtain the corresponding Solid Support of 3’MVIP.
- the linker B in the general formula is branched 1 to 4 times to obtain the corresponding 5"MVIP phosphoramidite monomer.
- ERCd-01-c1 (3.24 g, 2.6 mmol) was dissolved in methanol (60 mL), and 10% palladium carbon (0.3 g) and acetic acid (2.0 mL) were added. Then hydrogenation was added under normal pressure and the reaction was allowed to proceed overnight. The reaction solution was filtered through diatomaceous earth, and the filtrate was evaporated to dryness under reduced pressure to obtain 2.9 g of an oily substance ERCd-01-c2, the high-resolution mass spectrum of which is shown in Figure 1.
- the synthesis steps refer to the synthesis of 3’MVIP09-c1 in 3.1.1.6., and the high-resolution mass spectrum of the synthesized 3’MVIP17-c1 is shown in Figure 2.
- the synthesis steps refer to the synthesis of 3.1.1.6.3’MVIP09-c1.
- the synthesis steps refer to the synthesis of 3.1.1.7.3’MVIP09-c2.
- the synthesis steps refer to 3.1.1.8.3’MVIP09’s Solid Support synthesis.
- Phosphoramidite monomer of 5'MVIP01 Weigh YICd-01-c2 (1.12 g, 2.0 mmol), and refer to 3.2.1.1. to 3.2.1.5 for the remaining operations.
- the instrument After the synthesis method is set up, the instrument is ready to work. Click Run to start the synthesis. Observe and record the area of each detritylation peak online. During the synthesis process, add the deprotection reagent according to the actual amount used.
- argon is purged into the synthesis column for ⁇ 2h, and the synthesis column is unloaded according to the operating procedures.
- the solid phase carrier in the synthesis column is transferred to the reaction bottle, methylamine aqueous solution and ammonia water are added, and the reaction bottle is placed in a shaker at 35°C for 2-3 hours.
- the solution is filtered into a round-bottom flask, and the residual solid phase is washed with a 50% ethanol aqueous solution, filtered again and combined with the previous filtrate, the round-bottom flask is connected to a rotary evaporator, the water temperature is set to 50°C and evaporated until no distillation, ethanol is added to the round-bottom flask, mixed, and evaporated again until no distillation, and the operation is repeated until white powder appears at the bottom of the bottle.
- the obtained white powder is prepared into a solution, purified using a reverse chromatography column, and sampled to detect OD260 and purity.
- the purified antisense chain solution is divided into a syringe bottle and freeze-dried for standby use, and the product is sealed and stored in a -20°C refrigerator.
- the synthesis of the sense strand (5’MVIP09 coupling) of the coupled vector is the same as the antisense strand, where the Solid Support loaded on the column is the Universal vector.
- Add DIPEA to the intermediate to make a solution add 5’MVIP phosphoramidite monomer, mix well, and place the reaction bottle in a shaker at 35°C for 2-3 hours.
- RNA inhibitors Take out the double-stranded solution after centrifugation, remove the supernatant, add ultrapure water to completely dissolve the solid, take samples to test OD260 and purity, and obtain the RNA inhibitors in Table 14. Dispense the purified finished solution into vials for freeze-drying for later use, and seal the product and store it in a -20°C refrigerator.
- RNA inhibitors described in the present invention are all applicable to this rule, that is, when the 3' end of the sense chain or antisense chain of the RNA inhibitor is coupled with the carrier structure 3'MVIP, the solid support of 3'MVIP is used as the starting monomer for solid phase synthesis; when the 5' end of the sense chain or antisense chain of the RNA inhibitor is coupled with the carrier structure 5'MVIP, the 5'MVIP phosphoramidite monomer is used as the last monomer for solid phase synthesis.
- those skilled in the art can easily synthesize the remaining RNA inhibitors involved in the present invention.
- RNA inhibitors of this example are selected from Tables 1-7, and the inhibitory effects of the RNA inhibitors are verified by free uptake by PHHs cells.
- RNAiMAX transfected the compound into cells. 48 hours after transfection, Total RNA was extracted using the Super Total RNA Extraction Kit (Promega-LS1040), and cDNA was synthesized using One-Step gDNA Removal. Green qPCR SuperMix (+Dye I) was used for qPCR detection.
- the target gene mRNA expression level in the sample was calculated based on the Ct value of each sample, and the calculation was performed by the ⁇ Ct relative quantitative method.
- the relative expression of the target gene was expressed by 2- ⁇ CT.
- RNA inhibitors on the complement system mRNA of PHH cells at concentrations of 500nM, 100nM, 10nM, 1nM, 0.02nM, 10nM, 1nM and 0.1nM was investigated.
- the experimental results of the inhibitory effect of CFB RNA inhibitors on PHH cells are shown in Table 16-1.
- RNA inhibitors of this example are selected from Table 7.
- Example 6-1 RNA inhibitors were prepared by the method described in Example 4. Referring to the test method of Example 2, the inhibitory effects of RNA inhibitors on CFB mRNA, C5 mRNA, and C3 mRNA in Hep3B cells at concentrations of 1 nM and 0.01 nM were investigated. The test results are shown in Tables 17-1 to 17-5.
- RNA inhibitors of this embodiment are selected from Table 7.
- the RNA inhibitors Kylo-27-DS8201, Kylo-27-DS8771 and Kylo-27-DS8141 were investigated for their inhibitory effects on C3 mRNA in Hep3B cells at different concentrations. Three inhibition rate data were tested for each concentration and the average was taken. The inhibition rate-concentration curve was drawn based on the experimental data, and the corresponding EC50, EC75, EC85 and EC95 were calculated. The obtained test results are shown in Tables 18-1 and 18-2.
- RNA inhibitors of this example are selected from Table 7, and the inhibitory effects of the RNA inhibitors are verified by humanized CFB mice.
- Example 7-1 Inhibitory effect of Kylo-17 inhibitor on protein levels in humanized CFB mice
- Detection time About 200 ⁇ L of blood was collected from the inner canthus of the eye on Day 1 before administration, Day 7, Day 14, Day 21, Day 28, Day 35 and Day 42 after administration. The whole blood sample was placed in a 37°C water bath for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for hCFB protein detection.
- ELISA kit was used for detection (single well); serum samples were obtained by centrifugation of whole blood samples and tested freshly.
- Example 7-2 Inhibitory effect of Kylo-19 inhibitor on protein levels in humanized C5 mice
- the experimental animals were randomly divided into saline group, Kylo-19-DS7511, Kylo-19-DS7901, Kylo-19-DS7891, Kylo-19-DS7921, Kylo-19-DS8001 group according to the hC5 protein content in the serum on Day-3, with 5 mice in each group.
- the drug was administered by a single subcutaneous injection, with a dose of 3 mg/kg, a volume of 5 mL/kg, and a concentration of 0.6 mg/mL.
- the day of administration was recorded as Day 0.
- the animals were individually identified by ear tags.
- the cages were identified by hanging cage cards.
- Detection time About 200 ⁇ L of blood was collected from the inner canthus of the eye on Day 3 before administration, Day 7, Day 14, Day 21, Day 28, Day 35, Day 42 and Day 49 after administration. The whole blood sample was placed in a 37°C water bath for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for hC5 protein detection.
- Example 7-3 Inhibitory effect of Kylo-19 inhibitor on protein levels in humanized C5 mice
- mice After the experimental animals were adapted to feeding, they were randomly divided into saline group, Kylo-19-DS7871 group, and Kylo-19-DS7881 group according to the hC5 protein content in the serum on Day-3, with 5 mice in each group.
- the drug was administered by a single subcutaneous injection, with a dose of 3 mg/kg, a volume of 5 mL/kg, and a concentration of 0.6 mg/mL.
- the day of administration was recorded as Day 0.
- the animals were individually identified by ear tags.
- the cages were identified by hanging cage cards.
- Detection time About 200 ⁇ L of blood was collected from the inner canthus of the eye on Day 3 before administration, Day 7, Day 14, Day 21, Day 28, Day 35, Day 42 and Day 49 after administration. The whole blood sample was placed in a 37°C water bath for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for hC5 protein detection.
- Inhibitors with significant inhibitory effects were selected and optimized for cynomolgus monkey experiments.
- Example 8-1 Validation experiment of the pharmacodynamic activity of CFB inhibitors in NHP cynomolgus monkeys
- RNA inhibitors of this embodiment are selected from Table 7, and the inhibitory effects of the positive reference group and Kylo-17-DS2911 inhibitor on the expression of serum CFB protein level and CFB mRNA level in NHP cynomolgus monkeys are verified by cynomolgus monkeys.
- the inhibitors selected for the positive reference group are: positive chain: AsAsGAGAfAGfUfCfGUUUCAUUCAU-L96, antisense chain: AsfUsGAAfUGfAfAACGAfCUfUCUCUUsGsU.
- CFB protein level detection method ELISA kit detection (single well); serum samples are freshly tested after centrifugation of whole blood samples. Detection time: Day-1 before administration, Day 7, Day 14, Day 21, Day 28 after administration, and venous blood collection once a week until the end of the test. About 2mL of blood is collected each time. The whole blood sample is left at room temperature for 1 hour before centrifugation, centrifuged at 3000r for 10 minutes, and the supernatant is collected, which is the freshly obtained serum sample for CFB protein detection.
- liver biopsy was performed on crab-eating macaques, and the mRNA level of the target in the liver was determined using the probe-based qPCR method.
- the experimental data were expressed as mean ⁇ standard deviation (Mean ⁇ SD), and GraphPad Prism 8.3 analysis software was used for data plotting and analysis. T test was used for data statistical analysis, and P ⁇ 0.05 indicated statistical significance.
- Example 8-2 Effect of C5 inhibitor on C5 protein content and CH50 activity in serum of NHP cynomolgus monkeys
- RNA inhibitors of this embodiment are selected from Table 7, and the positive reference group (sense chain: AsAsfGCfAAfGAfUfAfUUfUUUfAUfAAUA-L96, antisense chain: UsfAsfUUfAUAfAAfAAUAfUCfUUfGCUUsUsUdTdT) and the effects of the Kylo-19-DS7881 inhibitor on serum C5 protein content and CH50 activity in NHP crab-eating monkeys are verified by crab-eating monkeys.
- venous blood was collected once a week until the end of the experiment. About 2 mL of blood was collected each time. The whole blood sample was allowed to stand at room temperature for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected, which was the fresh serum sample for C5 protein detection.
- C5 protein level detection method ELISA kit detection (single well); serum samples were freshly tested after whole blood samples were centrifuged.
- CH50 activity detection method ELISA kit detection (single well); serum samples are obtained after centrifugation of whole blood samples.
- the experimental data were expressed as mean ⁇ standard deviation (Mean ⁇ SD), and GraphPad Prism 8.3 analysis software was used for data plotting and analysis. T test was used for data statistical analysis, and P ⁇ 0.05 indicated statistical significance.
- the serum C5 protein level of Kylo-19-DS7881 of the present invention decreased significantly on D7 after administration, with an inhibition rate of 71.4%, and further decreased on D14.
- the expression of serum C5 protein level was continuously and stably inhibited during D14-D77 (the inhibition rate range was 89.2%-100%, P ⁇ 0.05or P ⁇ 0.01or P ⁇ 0.001), and the protein level on D84 rebounded after administration, with inhibition rates of 83.4% and 79.4% on D84 and D91, respectively.
- the inhibition ability was significantly better after D56 days, and it was more stable and the inhibition effect lasted longer than the positive reference.
- RNA inhibitors of this example are selected from Table 7, and the inhibitory effects of Kylo-27-DS8141 and Kylo-27-DS8201 inhibitors on the expression of serum C3 protein levels in NHP cynomolgus monkeys were evaluated.
- venous blood was collected once a week until the end of the experiment. About 2 mL of blood was collected each time. The whole blood sample was left at room temperature for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for C3 protein detection.
- C3 protein level detection method ELISA kit detection (single well); serum samples are freshly tested after centrifugation of whole blood samples.
- Kylo-27-DS8141 and Kylo-27-DS8201 are more significant and persistent.
- Kylo-27-DS8141 continuously and stably inhibits the expression of serum C3 protein levels during D14-D70 (the inhibition rate range is 79.6%-91.6%, P ⁇ 0.05or P ⁇ 0.01), and the inhibition rates can be maintained at 74.3% and 67.9% at D77 and D84, respectively, with good persistence.
- Kylo-27-DS8201 continuously and stably inhibits the expression of serum C3 protein levels during D14-D98, with the inhibition rate reaching 96.8% at D42 and still maintaining 85.1% at D98, with good persistence.
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Abstract
Description
本发明属于生物医药领域,具体涉及一种抑制补体系统基因表达的RNA抑制剂及其应用。The present invention belongs to the field of biomedicine, and specifically relates to an RNA inhibitor for inhibiting complement system gene expression and application thereof.
RNAiRNAi
RNAi(RNA干扰)于1998年,由安德鲁·法厄(Andrew Z.Fire)等在秀丽隐杆线虫中进行反义RNA抑制实验时发现,并将这一过程称为RNA干扰。这一发现被《Science》杂志评为2001年的十大科学进展之一,并名列2002年十大科学进展之首。自此以后,以RNA干扰为作用机理的siRNA作为潜在的基因治疗药物得到人们广泛的关注,2006年,安德鲁·法厄与克雷格·梅洛(Craig C.Mello)由于在RNA干扰机制研究中的贡献获得诺贝尔生理或医学奖。RNAi是在许多生物中,包括动物、植物和真菌,都可由双链RNA(dsRNA)触发的,在RNA抑制剂过程中,一种称为“Dicer”的核酸内切酶将长链dsRNA切割或“切丁”成21~25个核苷酸长的小片段。这些小片段,被称为小干扰RNA(siRNA),其中的反义链(Guide strand)被加载到Argonaute蛋白(AGO2)上。AGO2加载发生在RISC-loading复合物中,这是一个三元复合物,由Argonaute蛋白、Dicer和dsRNA结合蛋白(简称为TRBP)组成。在装载过程中,正义链(Passenger strand)链被AGO2裂解并排出。然后,AGO2使用反义链与包含完全互补序列的mRNA结合,然后催化这些mRNA的切割,致使mRNA分裂丧失翻译模板的作用,进而阻止相关蛋白质的合成。切割后,被切割的mRNA被释放,加载着反义链的RISC-loading复合物被循环用于另一轮的切割。RNAi (RNA interference) was discovered in 1998 by Andrew Z. Fire and others during an antisense RNA inhibition experiment in Caenorhabditis elegans, and the process was called RNA interference. This discovery was named one of the top ten scientific advances in 2001 by Science magazine, and ranked first among the top ten scientific advances in 2002. Since then, siRNA, which uses RNA interference as a mechanism of action, has received widespread attention as a potential gene therapy drug. In 2006, Andrew Z. Fire and Craig C. Mello won the Nobel Prize in Physiology or Medicine for their contributions to the study of RNA interference mechanisms. RNAi can be triggered by double-stranded RNA (dsRNA) in many organisms, including animals, plants, and fungi. In the RNA inhibitor process, a nuclease called "Dicer" cuts or "dices" the long-chain dsRNA into small fragments of 21 to 25 nucleotides. These small fragments, called small interfering RNA (siRNA), have their antisense strands loaded onto the Argonaute protein (AGO2). AGO2 loading occurs in the RISC-loading complex, a ternary complex consisting of the Argonaute protein, Dicer, and the dsRNA binding protein (TRBP for short). During the loading process, the sense strand (Passenger strand) is cleaved and expelled by AGO2. AGO2 then uses the antisense strand to bind to mRNAs containing completely complementary sequences and then catalyzes the cleavage of these mRNAs, causing the mRNA split to lose its role as a translation template, thereby preventing the synthesis of related proteins. After cleavage, the cleaved mRNA is released, and the RISC-loading complex loaded with the antisense strand is recycled for another round of cleavage.
据统计,在人体内的疾病相关蛋白中,大约超过80%的蛋白质不能被目前常规的小分子药物以及生物大分子制剂所靶向,属于不可成药蛋白。旨在通过基因的表达、沉默等功能治疗疾病的基因治疗被业界认为是继化学小分子药物、生物大分子药物之后的第三代治疗药物,这种疗法在基因水平上实现对疾病的治疗,不受不可成药蛋白的制约。作为基因治疗中最主流的类型,RNAi技术是从mRNA的水平对疾病进行治疗,相比化学小分子药物及生物大分子药物在蛋白质水平的治疗具有更高的效率。利用RNAi技术,可以根据特定基因序列,设计出特异性高、抑制效果好的siRNA的正义链和反义链序列,通过固相合成这些单链序列,然后正义链与反义链在特定的退火缓冲液中按照碱基配对原则配对成siRNA,最后通过载体系统输送到体内相应靶点,降解目标mRNA,破坏目标mRNA作为翻译模板的功能,从而阻止相关蛋白的合成。According to statistics, among the disease-related proteins in the human body, more than 80% of the proteins cannot be targeted by the current conventional small molecule drugs and biological macromolecule preparations, and are non-drugable proteins. Gene therapy, which aims to treat diseases through gene expression, silencing and other functions, is considered by the industry to be the third generation of therapeutic drugs after chemical small molecule drugs and biological macromolecule drugs. This therapy achieves the treatment of diseases at the gene level and is not restricted by non-drugable proteins. As the most mainstream type of gene therapy, RNAi technology treats diseases at the mRNA level, which is more efficient than chemical small molecule drugs and biological macromolecule drugs at the protein level. Using RNAi technology, the sense and antisense strand sequences of siRNA with high specificity and good inhibitory effect can be designed according to specific gene sequences. These single-stranded sequences are synthesized through solid phase, and then the sense and antisense strands are paired into siRNA according to the base pairing principle in a specific annealing buffer, and finally delivered to the corresponding target in the body through a carrier system, degrading the target mRNA and destroying the function of the target mRNA as a translation template, thereby preventing the synthesis of related proteins.
siRNA的递送系统siRNA delivery system
siRNA在血液和组织中不稳定,容易被核酸酶降解,为了提高siRNA的稳定性,可以通过对siRNA的正义链和/或反义链修饰,但这些化学修饰只提供有限的免受核酸酶降解的保护作用并且可能最终影响siRNA的活性。因此,还需要相应的传递系统来保障siRNA安全高效的穿过细胞膜。由于siRNA分子质量较大,且带有大量负电荷,而且具有高水溶解性,所以自身无法顺利穿越细胞膜到达细胞内。siRNA is unstable in blood and tissues and is easily degraded by nucleases. In order to improve the stability of siRNA, the sense strand and/or antisense strand of siRNA can be modified, but these chemical modifications only provide limited protection from nuclease degradation and may ultimately affect the activity of siRNA. Therefore, a corresponding delivery system is also needed to ensure that siRNA passes through the cell membrane safely and efficiently. Since siRNA has a large molecular weight, carries a large amount of negative charge, and has high water solubility, it cannot pass through the cell membrane smoothly and reach the cell.
脂质体基本结构是由亲水核和磷脂双分子层构成,具备类似生物膜的磷脂双分子层,拥有很高的生物相容性,所以脂质体一度成为最受欢迎、应用最广泛的siRNA载体。脂质体介导的siRNA递送主要将siRNA包裹到脂质体内,保护siRNA不被核酸酶降解,提高siRNA的通过细胞膜障碍的效率,从而促进细胞的吸收。例如阴离子脂质体、pH敏感性脂质体、免疫脂质体、膜融合脂质体(fusogenic liposome)和阳离子脂质等等,尽管取得了一定的进展,但脂质体本身容易引发炎症反应,给药前必须使用多种抗组胺和激素类如西利替嗪和地塞米松类等药物,以减少可能发生的急性炎症反应,因此在实际临床应用中并不适合所有治疗领域,尤其一些慢性疾病治疗领域,长期使用可能产生的积蓄毒性是潜在的安全隐患,因此需要一种更安全有效的载体系统来递送siRNA。The basic structure of liposomes is composed of a hydrophilic core and a phospholipid bilayer. It has a phospholipid bilayer similar to a biological membrane and has high biocompatibility. Therefore, liposomes once became the most popular and widely used siRNA carrier. Liposome-mediated siRNA delivery mainly encapsulates siRNA into liposomes to protect siRNA from degradation by nucleases, improve the efficiency of siRNA passing through cell membrane barriers, and thus promote cell absorption. For example, anionic liposomes, pH-sensitive liposomes, immunoliposomes, fusogenic liposomes, and cationic lipids, etc. Although certain progress has been made, liposomes themselves are prone to induce inflammatory reactions. Before administration, a variety of antihistamines and hormones such as cilitizine and dexamethasone must be used to reduce possible acute inflammatory reactions. Therefore, in actual clinical applications, it is not suitable for all treatment areas, especially in the treatment of some chronic diseases. The cumulative toxicity that may be caused by long-term use is a potential safety hazard. Therefore, a safer and more effective carrier system is needed to deliver siRNA.
肝脏中去唾液酸糖蛋白受体(ASGPR),是肝细胞特异性表达的受体,是一种高效的内吞型受体。由于体内生理情况下各种糖蛋白在酶或酸水解唾液酸后,暴露出的次末端是半乳糖残基,所以ASGPR特异性结合的糖为半乳糖基,故又称半乳糖特异性受体。半乳糖、半乳糖胺、N-乙酰半乳糖胺等单糖和多糖分子都对ASGPR有高亲和性。ASGPR主要生理功能是介导血液中去唾液酸糖蛋白、脂蛋白等物质的清除,且与病毒性肝炎、肝硬化、肝癌等肝脏疾病的发生发展有着密切联系。ASGPR这一特性的发现,对肝源性疾病的诊断及治疗起着重要作用(Ashwell G、Harford J,Carbohydrate specific Receptors of the Liver,Ann Rev Biochem 1982 51:531-554)。结构中含有半乳糖或半乳糖胺及其衍生物的肝源性疾病治疗药物可以特异性地与ASGPR亲和,从而具有主动肝靶向性,不需要其它的载体系统来输送。The asialoglycoprotein receptor (ASGPR) in the liver is a receptor specifically expressed by hepatocytes and is a highly efficient endocytic receptor. Since the secondary end of various glycoproteins exposed after enzyme or acid hydrolysis of sialic acid in the body under physiological conditions is a galactose residue, the sugar that ASGPR specifically binds is galactosyl, so it is also called galactose-specific receptor. Monosaccharide and polysaccharide molecules such as galactose, galactosamine, and N-acetylgalactosamine have high affinity for ASGPR. The main physiological function of ASGPR is to mediate the clearance of asialoglycoproteins, lipoproteins and other substances in the blood, and it is closely related to the occurrence and development of liver diseases such as viral hepatitis, cirrhosis, and liver cancer. The discovery of this characteristic of ASGPR plays an important role in the diagnosis and treatment of hepatic diseases (Ashwell G, Harford J, Carbohydrate specific Receptors of the Liver, Ann Rev Biochem 1982 51:531-554). The therapeutic drugs for liver-derived diseases containing galactose or galactosamine and their derivatives in the structure can specifically bind to ASGPR, thereby having active liver targeting and requiring no other carrier system for delivery.
补体系统Complement system
补体系统的激活包括三个途径:经典途径(Classical Pathway)、凝集素途径(Lectin Pathway)和旁路激活途径/替代途径(Alternative Pathway)是补体系统激活的三种常见途径。这三种途径的主要区别在于起始过程。起始后形成C3转化酶并进一步裂解C3。C3b片段与前面的复合物结合形成C5转化酶,C5转化酶裂解C5b和C5a,引起MAC的组装,MAC裂解细胞并刺激产生炎症反应以清除外来物质。The activation of the complement system includes three pathways: the classical pathway, the lectin pathway, and the alternative pathway. The main difference between these three pathways is the initiation process. After initiation, C3 convertase is formed and further cleaves C3. The C3b fragment combines with the previous complex to form C5 convertase, which cleaves C5b and C5a, causing the assembly of MAC, which cleaves cells and stimulates an inflammatory response to remove foreign substances.
经典途径(CP)通常由C1q附着于免疫复合物(如lgM或lgG)启动。然后C1q激活C1r,从而改变C1r2-C1s2结构的构象。C1r释放C1s,C1s具有丝氨酸蛋白酶(SP)活性,裂解C4和C2形成C4b2a(C3转化酶)。C3转化酶通过切割C3和随后与C3b结合形成C5转化酶。C4a、C3a和C5a刺激炎症反应。C5b在C6、C7、C8和C9的帮助下形成C5b-9MAC,攻击宿主细胞或病原体。The classical pathway (CP) is usually initiated by the attachment of C1q to an immune complex such as IgM or IgG. C1q then activates C1r, which changes the conformation of the C1r2-C1s2 structure. C1r releases C1s, which has serine protease (SP) activity and cleaves C4 and C2 to form C4b2a (C3 convertase). C3 convertase forms C5 convertase by cleaving C3 and subsequently binding to C3b. C4a, C3a, and C5a stimulate the inflammatory response. C5b forms C5b-9MAC with the help of C6, C7, C8, and C9 to attack host cells or pathogens.
凝集素途径(LP)的激活与经典途径(CP)的激活相同,不同之处是LP的引发剂是甘露糖结合凝集素(MBL),它通过与ficolin结合形成多聚体凝集素复合物。这种结合导致mbl相关丝氨酸蛋白酶(MASP)的激活,从而触发补体系统。MASP-1和MASP-2分别与C1r和C1s相似。MASP-1和MASP-2通过切割C4和C2形成C3转化酶来充分激活补体系统。Activation of the lectin pathway (LP) is identical to activation of the classical pathway (CP), except that the initiator of the LP is mannose-binding lectin (MBL), which forms a multimeric lectin complex by binding to ficolin. This binding leads to activation of the mbl-associated serine proteases (MASPs), which trigger the complement system. MASP-1 and MASP-2 are similar to C1r and C1s, respectively. MASP-1 and MASP-2 fully activate the complement system by cleaving C4 and C2 to form the C3 convertase.
旁路激活途径(AP)与经典途径(CP)不同之处在于激活是越过了C1、C4、C2三种成分,直接激活C3。当检测到病原体入侵时,大量的C3硫酯结构域(TED)发生亚稳态,将C3暴露于因子b(Fb)结合位点,C3b被B因子识别,形成复合物C3bB。C3bB复合物反过来又被D因子裂解,产生C3转化酶的活性形式(C3bBb),C3转化酶(C3bBb)将C3分解为C3a和C3b,C3b作为一个活性片段与病原体或靶细胞结合。作为对C3转化酶的反应,C3b产生C5转化酶,C5转化酶裂解C5以招募膜攻击复合体(MAC)裂解病原体。这两种类型(C3bB\C3bBb)的C3转化酶都会裂解C3,形成C3b。然后C3b结合更多的B因子,通过AP增强补体激活。或者C3b导致活性C5转化酶(C3bBbC3b或C4bC2bC3b)的形成,裂解C5并触发导致膜攻击复合物(MAC)(C5b-9)形成的后期事件。The alternative activation pathway (AP) differs from the classical pathway (CP) in that activation bypasses the three components of C1, C4, and C2 and directly activates C3. When pathogen invasion is detected, a large number of C3 thioester domains (TED) become metastable, exposing C3 to the factor b (Fb) binding site. C3b is recognized by factor B to form the complex C3bB. The C3bB complex is in turn cleaved by factor D to produce the active form of C3 convertase (C3bBb). C3 convertase (C3bBb) breaks down C3 into C3a and C3b. C3b binds to pathogens or target cells as an active fragment. In response to C3 convertase, C3b produces C5 convertase, which cleaves C5 to recruit the membrane attack complex (MAC) to lyse pathogens. Both types of C3 convertase (C3bB\C3bBb) will cleave C3 to form C3b. C3b then binds more factor B to enhance complement activation through AP. Alternatively, C3b leads to the formation of active C5 convertase (C3bBbC3b or C4bC2bC3b), which cleaves C5 and triggers later events leading to the formation of the membrane attack complex (MAC) (C5b-9).
补体系统的不适当的激活产生的疾病Diseases resulting from inappropriate activation of the complement system
抑制补体C3、C5基因的表达的抑制剂可用于治疗的疾病例如,阵发性睡眠性血红蛋白尿症(paroxysmal nocturnal hemoglobinuria,PNH)、非典型溶血性尿毒症综合征、类风湿性关节炎、阿尔茨海默病(AD)、肌萎缩侧索硬化症(ALS)、精神分裂症、帕金森病(PD)、朊病毒疾病、补体成分C3相关眼部疾病、缺血再灌注损伤以及神经退行性疾病。Inhibitors that inhibit the expression of complement C3 and C5 genes can be used to treat diseases such as paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome, rheumatoid arthritis, Alzheimer's disease (AD), amyotrophic lateral sclerosis (ALS), schizophrenia, Parkinson's disease (PD), prion diseases, complement component C3-related eye diseases, ischemia-reperfusion injury and neurodegenerative diseases.
抑制补体因子B基因的表达的抑制剂可用于治疗患有补体因子B相关病症的受试者,所述病症是例如C3肾小球病、系统性红斑狼疮(SLE)如狼疮性肾炎、IgA肾病、糖尿病性肾病和多囊性肾病。Inhibitors that inhibit the expression of complement factor B genes can be used to treat subjects with complement factor B-associated disorders, such as C3 glomerulopathy, systemic lupus erythematosus (SLE) such as lupus nephritis, IgA nephropathy, diabetic nephropathy, and polycystic kidney disease.
药物的联用Combination of drugs
市场上已有的补体抑制剂包括:Soliris、Ultomiris、Empaveli、Eculizumab、Ravulizumab或Iptacopan(LNP023),这些多肽、单抗或小分子药物可以与抑制补体系统表达的RNAi抑制剂一起联合使用,从而提高全身抑制补体系统的能力。但是目前的补体抑制剂大多在临床被评估给药次数是一周到两周一次,成本比较高,还会引发PNH受试者低水平的溶血。因此,补体系统患者仍然需要一种新的替代药物或联合药物。The complement inhibitors available on the market include Soliris, Ultomiris, Empaveli, Eculizumab, Ravulizumab or Iptacopan (LNP023). These peptides, monoclonal antibodies or small molecule drugs can be used in combination with RNAi inhibitors that inhibit the expression of the complement system, thereby improving the ability of the whole body to inhibit the complement system. However, most of the current complement inhibitors are evaluated in clinical practice and are administered once a week to once every two weeks. The cost is relatively high and they can also cause low-level hemolysis in PNH subjects. Therefore, patients with the complement system still need a new alternative drug or combination drug.
一方面,本发明提供了一种抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐。In one aspect, the present invention provides an RNA inhibitor or a pharmaceutically acceptable salt thereof for inhibiting the expression of complement system genes.
一种抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,RNA抑制剂由链长为15-30的正义链和反义链通过碱基配对形成,链长优选为19-23,其中反义链包括与编码补体系统的mRNA互补的区,并且其中互补区包含与表1-1、表1-2、表1-3中的任一个表中的任一个反义链相差0、1、2、3个核苷酸的至少15个连续核苷酸。An RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, wherein the RNA inhibitor is formed by base pairing of a sense strand and an antisense strand with a chain length of 15-30, preferably 19-23, wherein the antisense strand includes a region complementary to an mRNA encoding a complement system, and wherein the complementary region comprises at least 15 consecutive nucleotides that differ by 0, 1, 2, or 3 nucleotides from the antisense strand of any one of Tables 1-1, 1-2, and 1-3.
前述的一种抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,所述RNA抑制剂为抑制CFB基因表达的RNA抑制剂,其中反义链包括与靶序列互补的区,靶序列为:5'gucuagucaacuuaauugaga 3'SEQ ID NO:25,在NM_001710.5中的起始位置在1157位,正义链与反义链之间至少有85%的碱基互补。The aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, wherein the RNA inhibitor is an RNA inhibitor for inhibiting CFB gene expression, wherein the antisense strand includes a region complementary to the target sequence, the target sequence is: 5'gucuagucaacuuaauugaga 3' SEQ ID NO: 25, the starting position in NM_001710.5 is at 1157, and there is at least 85% base complementarity between the sense strand and the antisense strand.
前述的一种抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,所述RNA抑制剂为抑制C5基因表达的RNA抑制剂,其中反义链包括与靶序列互补的区,靶序列为:5'uugucccaguauucuauguuu 3'SEQ ID NO:826,在NM_001735.3中的起始位置在3073位,正义链与反义链之间至少有85%的碱基互补。The aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, wherein the RNA inhibitor is an RNA inhibitor for inhibiting C5 gene expression, wherein the antisense strand includes a region complementary to the target sequence, the target sequence is: 5'uugucccaguauucuauguuu 3'SEQ ID NO: 826, the starting position in NM_001735.3 is at position 3073, and there is at least 85% base complementarity between the sense strand and the antisense strand.
前述的一种抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,所述RNA抑制剂为抑制C3基因表达的RNA抑制剂,其中反义链包括与靶序列互补的区,靶序列为:5'gguguugacagauacaucu 3'SEQ ID NO:1952,在NM_000064.4中的起始位置在4329位;5'ggagccuacagagaaauucua 3'SEQ ID NO:2039,在NM_000064.4中的起始位置在771位;靶序列为:5'agaaauucuacuacaucuaua 3'SEQ ID NO:2048,在NM_000064.4中的起始位置在782位;靶序列为:5'gcugaggagaauugcuucaua 3'SEQ ID NO:2240,在NM_000064.4中的起始位置在4603位;靶序列为:5'ggagaauugcuucauacaaaa 3'SEQ ID NO:2245,在NM_000064.4中的起始位置在4608位;正义链与反义链之间至少有85%的碱基互补。The aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, wherein the RNA inhibitor is an RNA inhibitor for inhibiting C3 gene expression, wherein the antisense strand includes a region complementary to a target sequence, the target sequence is: 5'gguguugacagauacaucu 3' SEQ ID NO: 1952, the starting position in NM_000064.4 is at position 4329; 5'ggagccuacagagaaauucua 3' SEQ ID NO: 2039, the starting position in NM_000064.4 is at position 771; the target sequence is: 5'agaaa uucuacuacaucuaua 3'SEQ ID NO: 2048, the starting position in NM_000064.4 is 782; the target sequence is: 5'gcugaggagaauugcuucaua 3'SEQ ID NO: 2240, the starting position in NM_000064.4 is 4603; the target sequence is: 5'ggagaauugcuucauacaaaa 3'SEQ ID NO: 2245, the starting position in NM_000064.4 is 4608; there is at least 85% base complementarity between the sense chain and the antisense chain.
前述的CFB RNA抑制剂或其药学上可接受的盐,反义链选自以下序列:The aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
5'ucucaauuaaguugacuagacac 3'SEQ ID NO:293;5'ucucaauuaaguugacuagacac 3'SEQ ID NO: 293;
或与反义链具有相同的至少15个连续核苷酸的序列,或与反义链相差一个、两个或三个核苷酸的序列,正义链可以是任意的含有与反义链至少85%碱基互补的序列;or a sequence having at least 15 consecutive nucleotides identical to the antisense strand, or a sequence differing from the antisense strand by one, two or three nucleotides, the sense strand may be any sequence containing at least 85% base complementarity with the antisense strand;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
前述的CFB RNA抑制剂或其药学上可接受的盐,正义链选自以下序列:The aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
5'gucuagucaacuuaauugaga 3'SEQ ID NO:25;5'gucuagucaacuuaauugaga 3'SEQ ID NO: 25;
或与正义链具有相同的至少15个连续核苷酸的序列,或与正义链相差一个、两个或三个核苷酸的序列,正义链可以是任意的含有与反义链至少85%碱基互补的序列;or a sequence having at least 15 consecutive nucleotides identical to the sense strand, or a sequence differing from the sense strand by one, two or three nucleotides, the sense strand being any sequence containing at least 85% base complementarity with the antisense strand;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine.
前述的C5 RNA抑制剂或其药学上可接受的盐,反义链选自以下序列:The aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
5'aaacauagaauacugggacaacg 3'SEQ ID NO:1278;5'aaacauagaauacugggacaacg 3'SEQ ID NO: 1278;
或与反义链具有相同的至少15个连续核苷酸的序列,或与反义链相差一个、两个或三个核苷酸的序列,正义链可以是任意的含有与反义链至少85%碱基互补的序列;or a sequence having at least 15 consecutive nucleotides identical to the antisense strand, or a sequence differing from the antisense strand by one, two or three nucleotides, the sense strand may be any sequence containing at least 85% base complementarity with the antisense strand;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
前述的C5 RNA抑制剂或其药学上可接受的盐,正义链选自以下序列:The aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
5'uugucccaguauucuauguuu 3'SEQ ID NO:826;5'uugucccaguauucuauguuu 3'SEQ ID NO: 826;
或与正义链具有相同的至少15个连续核苷酸的序列,或与正义链相差一个、两个或三个核苷酸的序列,反义链可以是任意的含有与正义链至少85%碱基互补的序列;or a sequence having at least 15 consecutive nucleotides identical to the sense strand, or a sequence differing from the sense strand by one, two or three nucleotides, the antisense strand may be any sequence containing at least 85% base complementarity with the sense strand;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine.
前述的C3 RNA抑制剂或其药学上可接受的盐,反义链选自以下序列:The aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
5'agauguaucugucaacaccau 3'SEQ ID NO.2543;5'agauguaucugucaacaccau 3'SEQ ID NO.2543;
5'uagaauuucucuguaggcuccac 3'SEQ ID NO.2630;5'uagaauuucucuguaggcuccac 3'SEQ ID NO.2630;
5'uauagauguaguagaauuucucu 3'SEQ ID NO.2639;5'uauagauguaguagaauuucucu 3'SEQ ID NO.2639;
5'uaugaagcaauucuccucagcac 3'SEQ ID NO.2831;5'uaugaagcaauucuccagcac 3'SEQ ID NO.2831;
5'uuuuguaugaagcaauucuccuc 3'SEQ ID NO.2590;5'uuuuguaugaagcaauucuccuc 3'SEQ ID NO.2590;
或与反义链具有相同的至少15个连续核苷酸的序列,或与反义链相差一个、两个或三个核苷酸的序列,or a sequence having at least 15 consecutive nucleotides identical to the antisense strand, or a sequence differing from the antisense strand by one, two or three nucleotides,
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸;正义链可以是任意的含有与反义链至少85%碱基互补的序列。Wherein, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide; the sense strand can be any sequence that contains at least 85% base complementarity with the antisense strand.
前述的C3 RNA抑制剂或其药学上可接受的盐,正义链选自以下序列:The aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
5'gguguugacagauacaucu 3'SEQ ID NO.1952;5'gguguugacagauacaucu 3'SEQ ID NO.1952;
5'ggagccuacagagaaauucua 3'SEQ ID NO.2039;5'ggagccuacagagaaauucua 3'SEQ ID NO.2039;
5'agaaauucuacuacaucuaua 3'SEQ ID NO.2048;5'agaaauucuacuacaucuaua 3'SEQ ID NO.2048;
5'gcugaggagaauugcuucaua 3'SEQ ID NO.2240;5'gcugaggagaauugcuucaua 3'SEQ ID NO.2240;
5'ggagaauugcuucauacaaaa 3'SEQ ID NO.2245;5'ggagaauugcuucauacaaaa 3'SEQ ID NO.2245;
或与正义链具有相同的至少15个连续核苷酸的序列,或与正义链相差一个、两个或三个核苷酸的序列,or a sequence having at least 15 consecutive nucleotides identical to the sense strand, or a sequence differing from the sense strand by one, two or three nucleotides,
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸;反义链可以是任意的含有与正义链至少85%碱基互补的序列。Wherein, g = guanylate, a = adenylate, u = uridylate, c = cytidine; the antisense strand can be any sequence that contains at least 85% base complementarity with the sense strand.
前述的CFB RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:25或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列;且反义链为SEQ ID NO:293或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列:The aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is SEQ ID NO: 25 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides; and the antisense strand is SEQ ID NO: 293 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
正义链:5'gucuagucaacuuaauugaga 3'SEQ ID NO:25;Sense strand: 5'gucuagucaacuuaauugaga 3'SEQ ID NO: 25;
反义链:5'ucucaauuaaguugacuagacac 3'SEQ ID NO:293;Antisense strand: 5'ucucaauuaaguugacuagacac 3' SEQ ID NO: 293;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
前述的C5 RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:826或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列;且反义链为SEQ ID NO:1278或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列:The aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is SEQ ID NO: 826 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides; and the antisense strand is SEQ ID NO: 1278 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
正义链:5'uugucccaguauucuauguuu 3'SEQ ID NO:826;Sense strand: 5'uugucccaguauucuauguuu 3' SEQ ID NO: 826;
反义链:5'aaacauagaauacugggacaacg 3'SEQ ID NO:1278;Antisense strand: 5'aaacauagaauacugggacaacg 3'SEQ ID NO: 1278;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
前述的C3 RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:2048或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列;且反义链为SEQ ID NO:2639或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列:The aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is SEQ ID NO: 2048 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides; and the antisense strand is SEQ ID NO: 2639 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
正义链:5'agaaauucuacuacaucuaua 3'SEQ ID NO:2048;Sense strand: 5'agaaauucuacuacaucuaua 3' SEQ ID NO: 2048;
反义链:5'uauagauguaguagaauuucucu 3'SEQ ID NO:2639;Antisense strand: 5'uauagauguaguagaauuucucu 3' SEQ ID NO: 2639;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
前述的C3 RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:2639或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列;且反义链为SEQ ID NO:2831或与其具有相同的至少15个连续核苷酸的序列,或与其相差一个、两个或三个核苷酸的序列:The aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is SEQ ID NO: 2639 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides; and the antisense strand is SEQ ID NO: 2831 or a sequence having at least 15 consecutive nucleotides identical thereto, or a sequence differing therefrom by one, two or three nucleotides:
正义链:5'gcugaggagaauugcuucaua 3'SEQ ID NO:2240;Sense strand: 5'gcugaggagaauugcuucaua 3'SEQ ID NO: 2240;
反义链:5'uaugaagcaauucuccucagcac 3'SEQ ID NO:2831;Antisense strand: 5'uaugaagcaauucuccucagcac 3' SEQ ID NO: 2831;
其中,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Among them, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
前述的RNA抑制剂或其药学上可接受的盐,RNA抑制剂至少一个核苷酸经修饰。In the aforementioned RNA inhibitor or a pharmaceutically acceptable salt thereof, at least one nucleotide of the RNA inhibitor is modified.
前述的RNA抑制剂或其药学上可接受的盐,修饰包括:2'-氟修饰,2'-甲氧基修饰、硫代磷酸酯基修饰、invAb修饰、甘油核苷酸,3'末端脱氧胸腺嘧啶(dT)核苷酸、锁定核苷酸、解锁核苷酸、构象限制性核苷酸、约束乙基核苷酸、2'-氨基修饰的核苷酸、2'-O-烯丙基修饰的核苷酸、2'-C-烷基修饰的核苷酸、2'-羟基修饰的核苷酸、2'-甲氧基乙基修饰的核苷酸、2'-O-烷基修饰的核苷酸、2'磷酸酯修饰或2-O-(N-甲基乙酰胺)修饰、吗啉代核苷酸、氨基磷酸酯、无碱基核苷酸、无碱基脱氧核苷酸、包含非天然碱基的核苷酸、四氢吡喃修饰的核苷酸、1,5-脱水己糖醇修饰的核苷酸、环己烯基修饰的核苷酸、甲基膦酸酯基修饰、5'-磷酸酯修饰、5'-磷酸酯类似物修饰、热不稳定核苷酸、核苷酸类似物中的一种或几种的组合。The aforementioned RNA inhibitor or its pharmaceutically acceptable salt, the modification includes: 2'-fluoro modification, 2'-methoxy modification, thiophosphate modification, invAb modification, glycerol nucleotide, 3' terminal deoxythymine (dT) nucleotide, locked nucleotide, unlocked nucleotide, conformationally restricted nucleotide, constrained ethyl nucleotide, 2'-amino modified nucleotide, 2'-O-allyl modified nucleotide, 2'-C-alkyl modified nucleotide, 2'-hydroxyl modified nucleotide, 2'-methoxyethyl modified nucleotide, 2'-O-alkyl modified nucleotide, 2' phosphate modification or 2-O-(N-methylacetamide) modification, morpholino nucleotide, aminophosphoryl, abasic nucleotide, abasic deoxynucleotide, nucleotide containing non-natural base, tetrahydropyran modified nucleotide, 1,5-anhydrohexitol modified nucleotide, cyclohexenyl modified nucleotide, methylphosphonate modification, 5'-phosphate modification, 5'-phosphate analog modification, thermally unstable nucleotide, nucleotide analogs one or a combination of several thereof.
前述的CFB RNA抑制剂或其药学上可接受的盐,反义链选自以下序列:The aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
5'UsdCsUCdAATUAAGTUfGACUAGACsAsC 3'SEQ ID NO:588;5'UsdCsUCdAATUAAGTUfGACUAGACsAsC 3'SEQ ID NO: 588;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;fGs=2'-氟-3'-硫代鸟苷酸,T=2’-脱氧-胸苷酸,dA=2'-脱氧-腺苷酸,dG=2'-脱氧-鸟苷酸;正义链可以是任意的含有与反义链至少85%碱基互补的序列,修饰方式不受限制。Among them, G=2'-O-methylguanylate, A=2'-O-methyladenylate, U=2'-O-methyluridylate, C=2'-O-methylcytidine; Gs=2'-O-methyl-3'-thioguanylate, As=2'-O-methyl-3'-thioadenylate, Cs=2'-O-methyl-3'-thiocytidine; fG=2'-fluoroguanylate, fA=2'-fluoroadenylate, fU=2'-fluorouridylate, fC=2'-fluorocytidine; fGs=2'-fluoro-3'-thioguanylate, T=2'-deoxy-thymidylate, dA=2'-deoxy-adenylate, dG=2'-deoxy-guanylate; the sense strand can be any sequence containing at least 85% base complementarity with the antisense strand, and the modification method is not limited.
前述的C5 RNA抑制剂或其药学上可接受的盐,反义链选自以下序列:The aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
5'AsdAsACdAUdAGAAUdACfUGGGACAAsCsG 3'SEQ ID NO:1598;5'AsdAsACdAUdAGAAUdACfUGGGACAAsCsG 3'SEQ ID NO: 1598;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;fGs=2'-氟-3'-硫代鸟苷酸,T=2’-脱氧-胸苷酸,dA=2'-脱氧-腺苷酸,dG=2'-脱氧-鸟苷酸;正义链可以是任意的含有与反义链至少85%碱基互补的序列,修饰方式不受限制。Among them, G=2'-O-methylguanylate, A=2'-O-methyladenylate, U=2'-O-methyluridylate, C=2'-O-methylcytidine; Gs=2'-O-methyl-3'-thioguanylate, As=2'-O-methyl-3'-thioadenylate, Cs=2'-O-methyl-3'-thiocytidine; fG=2'-fluoroguanylate, fA=2'-fluoroadenylate, fU=2'-fluorouridylate, fC=2'-fluorocytidine; fGs=2'-fluoro-3'-thioguanylate, T=2'-deoxy-thymidylate, dA=2'-deoxy-adenylate, dG=2'-deoxy-guanylate; the sense strand can be any sequence containing at least 85% base complementarity with the antisense strand, and the modification method is not limited.
前述的C3 RNA抑制剂或其药学上可接受的盐,反义链选自以下序列:The aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the antisense strand is selected from the following sequences:
5'UsdAsUAdGATGUAGTAfGAAUUUCUsCsU 3'SEQ ID NO:1665;5'UsdAsUAdGATGUAGTAfGAAUUUCUsCsU 3'SEQ ID NO: 1665;
5'UsfAsUGAfAGfCAAUUCfUCfCUCAGCsAsC 3'SEQ ID NO:1671;5'UsfAsUGAfAGfCAAUUCfUCfCUCAGCsAsC 3'SEQ ID NO: 1671;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;fGs=2'-氟-3'-硫代鸟苷酸,fAs=2'-氟-3'-硫代腺苷酸,fUs=2'-氟-3'-硫代尿苷酸,fCs=2'-氟-3'-硫代胞苷酸,T=2'-脱氧-胸苷酸,dG=2'-脱氧-鸟苷酸,dAs=2'-脱氧-3'-硫代腺苷酸;正义链可以是任意的含有与反义链至少85%碱基互补的序列,修饰方式不受限制。Among them, G = 2'-O-methylguanylate, A = 2'-O-methyladenylate, U = 2'-O-methyluridylate, C = 2'-O-methylcytidine; Gs = 2'-O-methyl-3'-thioguanylate, As = 2'-O-methyl-3'-thioadenylate, Us = 2'-O-methyl-3'-thiouridylate, Cs = 2'-O-methyl-3'-thiocytidine; fG = 2'-fluoroguanylate, fA = 2'-fluoroadenylate, fU = 2'-fluorouridine Acid, fC=2'-fluorocytidylic acid; fGs=2'-fluoro-3'-thioguanylic acid, fAs=2'-fluoro-3'-thioadenylic acid, fUs=2'-fluoro-3'-thiouridylic acid, fCs=2'-fluoro-3'-thiocytidylic acid, T=2'-deoxy-thymidylic acid, dG=2'-deoxy-guanylic acid, dAs=2'-deoxy-3'-thioadenylic acid; the sense strand can be any sequence containing at least 85% base complementarity with the antisense strand, and the modification method is not limited.
前述的CFB RNA抑制剂或其药学上可接受的盐,正义链选自以下序列:The aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
5’GsUsCUAGfUCfAfAfCUUAAUUGAsGsA 3'SEQ ID NO:559;5’GsUsCUAGfUCfAfAfCUUAAUUGAsGsA 3’SEQ ID NO: 559;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;反义链可以是任意的含有与正义链至少85%碱基互补的序列,修饰方式不受限制。Among them, G=2'-O-methylguanylic acid, A=2'-O-methyladenylic acid, U=2'-O-methyluridylic acid, C=2'-O-methylcytidylic acid; Gs=2'-O-methyl-3'-thioguanylic acid, As=2'-O-methyl-3'-thioadenylic acid, Us=2'-O-methyl-3'-thiouridylic acid, Cs=2'-O-methyl-3'-thiocytidylic acid; fG=2'-fluoroguanylic acid, fA=2'-fluoroadenylic acid, fU=2'-fluorouridylic acid, fC=2'-fluorocytidylic acid; the antisense strand can be any sequence containing at least 85% base complementarity with the sense strand, and the modification method is not limited.
前述的C5 RNA抑制剂或其药学上可接受的盐,正义链选自以下序列:The aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
5’UsUsGUCCfCAfGfUfAUUCUAUGUsUsU 3'SEQ ID NO:1537;5’UsUsGUCCfCAfGfUfAUUCUAUGUsUsU 3’SEQ ID NO: 1537;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;反义链可以是任意的含有与正义链至少85%碱基互补的序列,修饰方式不受限制。Among them, G=2'-O-methylguanylic acid, A=2'-O-methyladenylic acid, U=2'-O-methyluridylic acid, C=2'-O-methylcytidylic acid; Gs=2'-O-methyl-3'-thioguanylic acid, As=2'-O-methyl-3'-thioadenylic acid, Us=2'-O-methyl-3'-thiouridylic acid, Cs=2'-O-methyl-3'-thiocytidylic acid; fG=2'-fluoroguanylic acid, fA=2'-fluoroadenylic acid, fU=2'-fluorouridylic acid, fC=2'-fluorocytidylic acid; the antisense strand can be any sequence containing at least 85% base complementarity with the sense strand, and the modification method is not limited.
前述的C3 RNA抑制剂或其药学上可接受的盐,正义链选自以下序列:The aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, wherein the sense strand is selected from the following sequences:
5’AsGsAAAUfUCfUfAfCUACAUCUAsUsA 3'SEQ ID NO:1645;5'AsGsAAAUfUCfUfAfCUACAUCUAsUsA 3'SEQ ID NO: 1645;
5’GsCsUGAGfGAfGfAfAUUGCUUCAsUsA 3'SEQ ID NO:1651;5’GsCsUGAGfGAfGfAfAUUGCUUCAsUsA 3’SEQ ID NO: 1651;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;反义链可以是任意的含有与正义链至少85%碱基互补的序列,修饰方式不受限制。Among them, G=2'-O-methylguanylic acid, A=2'-O-methyladenylic acid, U=2'-O-methyluridylic acid, C=2'-O-methylcytidylic acid; Gs=2'-O-methyl-3'-thioguanylic acid, As=2'-O-methyl-3'-thioadenylic acid, Us=2'-O-methyl-3'-thiouridylic acid, Cs=2'-O-methyl-3'-thiocytidylic acid; fG=2'-fluoroguanylic acid, fA=2'-fluoroadenylic acid, fU=2'-fluorouridylic acid, fC=2'-fluorocytidylic acid; the antisense strand can be any sequence containing at least 85% base complementarity with the sense strand, and the modification method is not limited.
作为一种优选,前述的CFB RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:559或与其相差一个、两个或三个核苷酸的序列,且反义链为SEQ ID NO:588或与其相差一个、两个或三个核苷酸的序列:As a preferred embodiment, the aforementioned CFB RNA inhibitor or a pharmaceutically acceptable salt thereof, the sense strand is SEQ ID NO: 559 or a sequence that differs therefrom by one, two or three nucleotides, and the antisense strand is SEQ ID NO: 588 or a sequence that differs therefrom by one, two or three nucleotides:
正义链:5’GsUsCUAGfUCfAfAfCUUAAUUGAsGsA 3'SEQ ID NO:559;Sense strand: 5’GsUsCUAGfUCfAfAfCUUAAUUGAsGsA 3’SEQ ID NO: 559;
反义链:5'UsdCsUCdAATUAAGTUfGACUAGACsAsC 3'SEQ ID NO:588;Antisense strand: 5'UsdCsUCdAATUAAGTUfGACUAGACsAsC 3'SEQ ID NO: 588;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;fGs=2'-氟-3'-硫代鸟苷酸,fAs=2'-氟-3'-硫代腺苷酸,fUs=2'-氟-3'-硫代尿苷酸,fCs=2'-氟-3'-硫代胞苷酸,T=2’-脱氧-胸苷酸,Ts=2’-脱氧-3’-硫代胸苷酸,dA=2'-脱氧-腺苷酸。Wherein, G = 2'-O-methylguanylate, A = 2'-O-methyladenylate, U = 2'-O-methyluridylate, C = 2'-O-methylcytidine; Gs = 2'-O-methyl-3'-thioguanylate, As = 2'-O-methyl-3'-thioadenylate, Us = 2'-O-methyl-3'-thiouridylate, Cs = 2'-O-methyl-3'-thiocytidine; fG = 2'-fluoroguanylate, f A = 2'-fluoroadenylic acid, fU = 2'-fluorouridylic acid, fC = 2'-fluorocytidylic acid; fGs = 2'-fluoro-3'-thioguanylic acid, fAs = 2'-fluoro-3'-thioadenylic acid, fUs = 2'-fluoro-3'-thiouridylic acid, fCs = 2'-fluoro-3'-thiocytidylic acid, T = 2'-deoxy-thymidylic acid, Ts = 2'-deoxy-3'-thiothymidylic acid, dA = 2'-deoxy-adenylic acid.
作为一种优选,前述的C5 RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:1537或与其相差一个、两个或三个核苷酸的序列,且反义链为SEQ ID NO:1598或与其相差一个、两个或三个核苷酸的序列:As a preferred embodiment, the aforementioned C5 RNA inhibitor or a pharmaceutically acceptable salt thereof, the sense strand is SEQ ID NO: 1537 or a sequence that differs therefrom by one, two or three nucleotides, and the antisense strand is SEQ ID NO: 1598 or a sequence that differs therefrom by one, two or three nucleotides:
正义链:5’UsUsGUCCfCAfGfUfAUUCUAUGUsUsU 3'SEQ ID NO:1537;Sense strand: 5’UsUsGUCCfCAfGfUfAUUCUAUGUsUsU 3’SEQ ID NO: 1537;
反义链:5'AsdAsACdAUdAGAAUdACfUGGGACAAsCsG 3'SEQ ID NO:1598;Antisense strand: 5'AsdAsACdAUdAGAAUdACfUGGGACAAsCsG 3'SEQ ID NO: 1598;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;fGs=2'-氟-3'-硫代鸟苷酸,fAs=2'-氟-3'-硫代腺苷酸,fUs=2'-氟-3'-硫代尿苷酸,fCs=2'-氟-3'-硫代胞苷酸,T=2’-脱氧-胸苷酸,Ts=2’-脱氧-3’-硫代胸苷酸,dA=2'-脱氧-腺苷酸。Wherein, G = 2'-O-methylguanylate, A = 2'-O-methyladenylate, U = 2'-O-methyluridylate, C = 2'-O-methylcytidine; Gs = 2'-O-methyl-3'-thioguanylate, As = 2'-O-methyl-3'-thioadenylate, Us = 2'-O-methyl-3'-thiouridylate, Cs = 2'-O-methyl-3'-thiocytidine; fG = 2'-fluoroguanylate, f A = 2'-fluoroadenylic acid, fU = 2'-fluorouridylic acid, fC = 2'-fluorocytidylic acid; fGs = 2'-fluoro-3'-thioguanylic acid, fAs = 2'-fluoro-3'-thioadenylic acid, fUs = 2'-fluoro-3'-thiouridylic acid, fCs = 2'-fluoro-3'-thiocytidylic acid, T = 2'-deoxy-thymidylic acid, Ts = 2'-deoxy-3'-thiothymidylic acid, dA = 2'-deoxy-adenylic acid.
作为一种优选,前述的C3 RNA抑制剂或其药学上可接受的盐,正义链为SEQ ID NO:1651或与其相差一个、两个或三个核苷酸的序列,且反义链为SEQ ID NO:1671或与其相差一个、两个或三个核苷酸的序列:As a preferred embodiment, the aforementioned C3 RNA inhibitor or a pharmaceutically acceptable salt thereof, the sense strand is SEQ ID NO: 1651 or a sequence that differs therefrom by one, two or three nucleotides, and the antisense strand is SEQ ID NO: 1671 or a sequence that differs therefrom by one, two or three nucleotides:
正义链:5’AsGsAAAUfUCfUfAfCUACAUCUAsUsA 3'SEQ ID NO:1645;Sense strand: 5’AsGsAAAUfUCfUfAfCUACAUCUAsUsA 3’SEQ ID NO: 1645;
反义链:5'UsdAsUAdGATGUAGTAfGAAUUUCUsCsU 3'SEQ ID NO:1665;Antisense strand: 5'UsdAsUAdGATGUAGTAfGAAUUUCUsCsU 3'SEQ ID NO: 1665;
或者,正义链为SEQ ID NO:1645或与其相差一个、两个或三个核苷酸的序列,且反义链为SEQ ID NO:1665或与其相差一个、两个或三个核苷酸的序列:Alternatively, the sense strand is SEQ ID NO: 1645 or a sequence that differs therefrom by one, two or three nucleotides, and the antisense strand is SEQ ID NO: 1665 or a sequence that differs therefrom by one, two or three nucleotides:
正义链:5'GsCsUGAGfGAfGfAfAUUGCUUCAsUsA 3'SEQ ID NO:1651;Sense strand: 5'GsCsUGAGfGAfGfAfAUUGCUUCAsUsA 3'SEQ ID NO: 1651;
反义链:5'UsfAsUGAfAGfCAAUUCfUCfCUCAGCsAsC 3'SEQ ID NO:1671;Antisense strand: 5'UsfAsUGAfAGfCAAUUCfUCfCUCAGCsAsC 3'SEQ ID NO: 1671;
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3'-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸;fGs=2'-氟-3'-硫代鸟苷酸,fAs=2'-氟-3'-硫代腺苷酸,fUs=2'-氟-3'-硫代尿苷酸,fCs=2'-氟-3'-硫代胞苷酸,T=2'-脱氧-胸苷酸,dG=2'-脱氧-鸟苷酸,dAs=2'-脱氧-3'-硫代腺苷酸。Wherein, G = 2'-O-methylguanylate, A = 2'-O-methyladenylate, U = 2'-O-methyluridylate, C = 2'-O-methylcytidine; Gs = 2'-O-methyl-3'-thioguanylate, As = 2'-O-methyl-3'-thioadenylate, Us = 2'-O-methyl-3'-thiouridylate, Cs = 2'-O-methyl-3'-thiocytidine; fG = 2'-fluoroguanylate, f A = 2'-fluoroadenylic acid, fU = 2'-fluorouridylic acid, fC = 2'-fluorocytidylic acid; fGs = 2'-fluoro-3'-thioguanylic acid, fAs = 2'-fluoro-3'-thioadenylic acid, fUs = 2'-fluoro-3'-thiouridylic acid, fCs = 2'-fluoro-3'-thiocytidylic acid, T = 2'-deoxy-thymidylic acid, dG = 2'-deoxy-guanylic acid, dAs = 2'-deoxy-3'-thioadenylic acid.
在一些实施方式中,本发明的RNA抑制剂的正义链或反义链中可容纳错配,错配位置可以发生在5’、3’端部也可以发生在序列内部,作为一种优选,错配不多于3个核苷酸,例如,错配0、1、2、3个核苷酸。In some embodiments, mismatches can be accommodated in the sense strand or antisense strand of the RNA inhibitor of the present invention. The mismatch position can occur at the 5' or 3' end or within the sequence. As a preferred embodiment, the mismatch is no more than 3 nucleotides, for example, 0, 1, 2, or 3 nucleotides.
在技术方式中,优选地,本发明的RNA抑制剂或其药学上可接受的盐还含有载体结构5'MVIP和3'MVIP,RNA抑制剂的结构如式Ia、Ib或Ic所示: In the technical method, preferably, the RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof further contains carrier structures 5'MVIP and 3'MVIP, and the structure of the RNA inhibitor is as shown in Formula Ia, Ib or Ic:
其中,in,
所述载体结构包括5'MVIP(5'MultiValent Import Platform)和3'MVIP(3'MultiValent Import Platform);The vector structure includes 5'MVIP (5'MultiValent Import Platform) and 3'MVIP (3'MultiValent Import Platform);
5'MVIP由转接点R1、连接链D、接头B、支链L和肝靶向特异性配体X组成,其通过转接点R1与正义链5'端或反义链5'端连接,其结构如通式I所示:5'MVIP consists of a transfer point R 1 , a connecting chain D, a linker B, a branch chain L and a liver-targeting specific ligand X, which is connected to the 5' end of the sense chain or the 5' end of the antisense chain through the transfer point R 1. Its structure is shown in general formula I:
(X-L)n-B-D-R1-(XL) n -BDR 1 -
II
3'MVIP由转接点R2、连接链D、接头B、支链L和肝靶向特异性配体X组成,其通过转接点R2与正义链3'端或反义链3'端连接,其结构如通式II所示:3'MVIP consists of a transfer point R 2 , a connecting chain D, a linker B, a side chain L and a liver-targeting specific ligand X, which is connected to the 3' end of the sense chain or the 3' end of the antisense chain through the transfer point R 2. Its structure is shown in general formula II:
(X-L)m-B-D-R2-(XL) m -BDR 2 -
IIII
其中,in,
n和m各自独立地为0-4的任意整数,各自独立地优选为1-3的整数,且n+m=2-6的整数,优选n+m=2、3或4,更优选为4;n and m are each independently any integer of 0-4, each independently preferably an integer of 1-3, and n+m=an integer of 2-6, preferably n+m=2, 3 or 4, more preferably 4;
转接点R1为如下所示的含有N、S或O的杂环或碳环结构: The transition point R1 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
或者,R1为-NH(CH2)xCH2O-,其中x为3-12的任意整数,优选为4-6的任意整数;Alternatively, R 1 is -NH(CH 2 ) x CH 2 O-, wherein x is any integer from 3 to 12, preferably any integer from 4 to 6;
转接点R2为如下所示的含有N、S或O的杂环或碳环结构: The transition point R2 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
或者,转接点R2为-NH(CH2)x1CH(OH)(CH2)x2CH2O-,其中x1为1-4的任意整数,x2为0-4的任意整数;Alternatively, the transition point R 2 is -NH(CH 2 ) x1 CH(OH)(CH 2 ) x2 CH 2 O-, wherein x1 is any integer from 1 to 4, and x2 is any integer from 0 to 4;
肝靶向特异性配体X选自用于增强肝细胞对RNA抑制剂的摄取的结构,在5’MVIP与3’MVIP各自的内部或5’MVIP与3’MVIP之间相同或不同,其选自单糖及其衍生物,优选为N-乙酰半乳糖胺及其衍生物,更优选地选自以下结构: The liver-targeting specific ligand X is selected from the structure used to enhance the uptake of RNA inhibitors by hepatocytes, and is the same or different within each of 5'MVIP and 3'MVIP or between 5'MVIP and 3'MVIP, and is selected from monosaccharides and their derivatives, preferably N-acetylgalactosamine and its derivatives, and more preferably selected from the following structures:
其中,W选自-OH、-NHCOOH和-NHCO(CH2)qCH3中的一种或两种,其中q为0-4的整数;Wherein, W is selected from one or two of -OH, -NHCOOH and -NHCO(CH 2 ) q CH 3 , wherein q is an integer of 0-4;
支链L在5’MVIP与3’MVIP各自的内部或5’MVIP与3’MVIP之间相同或不同,其选自如下结构中的一种或多种: The branched chain L is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from one or more of the following structures:
其中,r1是1-12的任意整数,r2为0-20的任意整数,Z为H、烷基或酰胺基,烷基如C1-C5烷基;wherein r1 is any integer from 1 to 12, r2 is any integer from 0 to 20, and Z is H, an alkyl group or an amide group, and the alkyl group is, for example, a C 1 -C 5 alkyl group;
接头B在5’MVIP与3’MVIP各自的内部或5’MVIP与3’MVIP之间相同或不同,其选自以下结构: The linker B is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from the following structures:
其中,A1和A2各自独立地是C、O、S、-NH-、羰基、酰胺基、磷酰基或硫代磷酰基,r为0-4的任意整数;wherein A1 and A2 are each independently C, O, S, -NH-, carbonyl, amide, phosphoryl or thiophosphoryl, and r is any integer from 0 to 4;
连接链D在5’MVIP与3’MVIP各自的内部或5’MVIP与3’MVIP之间相同或不同,其选自以下结构: The connecting chain D is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from the following structures:
其中,每个p各自独立地为1-20的任意整数;s为2-13的任意整数;Z1和Z2为相同或者不同的取代基团,如C3-C10烷基。Wherein, each p is independently any integer of 1-20; s is any integer of 2-13; Z1 and Z2 are the same or different substituent groups, such as C3 - C10 alkyl.
在一些实施方式中,5’MVIP选自表11中5’MVIP01至5’MVIP22中的任一个。In some embodiments, 5'MVIP is selected from any one of 5'MVIP01 to 5'MVIP22 in Table 11.
在一些实施方式中,3’MVIP选自表12中3’MVIP01至3’MVIP27中的任一个。In some embodiments, the 3’MVIP is selected from any one of 3’MVIP01 to 3’MVIP27 in Table 12.
在一些实施方式中,本发明的RNA抑制剂或其药学上可接受的盐,其中,5’MVIP为如下所示的5’MVIP01或5’MVIP09,3’MVIP为如下所示的3’MVIP01、3’MVIP09或3’MVIP17: In some embodiments, in the RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof, 5'MVIP is 5'MVIP01 or 5'MVIP09 as shown below, and 3'MVIP is 3'MVIP01, 3'MVIP09 or 3'MVIP17 as shown below:
在一些实施方式中,本发明的RNA抑制剂或其药学上可接受的盐,其中,正义链5’MVIP和反义链3’MVIP的组合为5’MVIP01/3’MVIP01、5’MVIP01/3’MVIP17或5’MVIP09/3’MVIP09,或者正义链5’MVIP和正义链3’MVIP的组合为5’MVIP01/3'MVIP09或5’MVIP09/3'MVIP01。In some embodiments, the RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof, wherein the combination of the sense chain 5’MVIP and the antisense chain 3’MVIP is 5’MVIP01/3’MVIP01, 5’MVIP01/3’MVIP17 or 5’MVIP09/3’MVIP09, or the combination of the sense chain 5’MVIP and the sense chain 3’MVIP is 5’MVIP01/3'MVIP09 or 5’MVIP09/3’MVIP01.
另一方面,CFB RNA抑制剂选自Kylo-17-DS2911。On the other hand, the CFB RNA inhibitor is selected from Kylo-17-DS2911.
另一方面,C5 RNA抑制剂选自Kylo-19-DS7881。On the other hand, the C5 RNA inhibitor is selected from Kylo-19-DS7881.
另一方面,C3 RNA抑制剂选自Kylo-27-DS8201、Kylo-27-DS8141。On the other hand, the C3 RNA inhibitor is selected from Kylo-27-DS8201 and Kylo-27-DS8141.
另一方面,本发明RNA抑制剂或其药学上可接受的盐在制备用于治疗和/或预防补体系统的水平升高相关的疾病的药物中的应用,疾病包括但不限于脂质代谢紊乱。In another aspect, the RNA inhibitor of the present invention or a pharmaceutically acceptable salt thereof is used in the preparation of a medicament for treating and/or preventing diseases associated with increased levels of the complement system, including but not limited to lipid metabolism disorders.
另一方面,一种药物组合物,该药物组合物包括前述的RNA抑制剂或用于治疗或预防补体系统相关疾病的其他治疗剂。In another aspect, a pharmaceutical composition comprises the aforementioned RNA inhibitor or other therapeutic agents for treating or preventing complement system-related diseases.
另一方面,一种药物组合物,该药物组合物包括前述的RNA抑制剂或其药学上可接受的盐和药学上可接受的辅料,其剂型为口服剂、静脉注射剂或者皮下或肌内注射剂,优选为皮下注射剂。On the other hand, a pharmaceutical composition comprises the aforementioned RNA inhibitor or a pharmaceutically acceptable salt thereof and a pharmaceutically acceptable excipient, and the dosage form is an oral agent, an intravenous injection, or a subcutaneous or intramuscular injection, preferably a subcutaneous injection.
本领域技术人员能够从下文的详细描述中容易地洞察到本申请的其它方面和优势。下文的详细描述中仅显示和描述了本申请的示例性实施方式。如本领域技术人员将认识到的,本申请的内容使得本领域技术人员能够对所公开的具体实施方式进行改动而不脱离本申请所涉及发明的精神和范围。相应地,本申请的附图和说明书中的描述仅仅是示例性的,而非为限制性的。Those skilled in the art can easily perceive other aspects and advantages of the present application from the detailed description below. In the detailed description below, only exemplary embodiments of the present application are shown and described. As will be appreciated by those skilled in the art, the content of the present application enables those skilled in the art to modify the disclosed specific embodiments without departing from the spirit and scope of the invention to which the present application relates. Accordingly, the description in the drawings and specification of the present application is merely exemplary and not restrictive.
本申请所涉及的发明的具体特征如所附权利要求书所显示。通过参考下文中详细描述的示例性实施方式和附图能够更好地理解本申请所涉及发明的特点和优势。The specific features of the invention involved in this application are shown in the attached claims. The features and advantages of the invention involved in this application can be better understood by referring to the exemplary embodiments and drawings described in detail below.
对附图简要说明如下:The accompanying drawings are briefly described as follows:
图1为本申请实施例3中3.1.15合成的ERCd-01-c2的高分辨质谱图;FIG1 is a high-resolution mass spectrum of ERCd-01-c2 synthesized in 3.1.15 in Example 3 of the present application;
图2为本申请实施例3中3.1.2.6合成的3'MVIP17-c1的高分辨质谱图;FIG2 is a high-resolution mass spectrum of 3'MVIP17-c1 synthesized in 3.1.2.6 of Example 3 of the present application;
图3为本申请实施例3中3.2.1.2合成的5'MVIP09-ERCd-PFP-c2的高分辨率质谱图;FIG3 is a high-resolution mass spectrum of 5'MVIP09-ERCd-PFP-c2 synthesized in 3.2.1.2 of Example 3 of the present application;
图4是本发明hCFB小鼠给药后对小鼠血清中hCFB蛋白抑制率的影响示意图;FIG4 is a schematic diagram showing the effect of hCFB administration of the present invention on the inhibition rate of hCFB protein in mouse serum;
图5是本发明实施例7-2的hC5小鼠给药后对小鼠血清中hC5蛋白抑制率的影响示意图;FIG5 is a schematic diagram showing the effect of hC5 administration of Example 7-2 of the present invention on the inhibition rate of hC5 protein in mouse serum;
图6是本发明实施例7-3的hC5小鼠给药后对小鼠血清中hC5蛋白抑制率的影响示意图;6 is a schematic diagram showing the effect of hC5 administration of Example 7-3 of the present invention on the inhibition rate of hC5 protein in mouse serum;
图7是本发明hC3小鼠给药后对小鼠血清中hC3蛋白抑制率的影响示意图;7 is a schematic diagram showing the effect of hC3 administration of the present invention on the inhibition rate of hC3 protein in mouse serum;
图8是本发明CFB RNA抑制剂对NHP食蟹猴CFB蛋白抑制率的影响示意图;FIG8 is a schematic diagram showing the effect of the CFB RNA inhibitor of the present invention on the inhibition rate of CFB protein in NHP cynomolgus monkeys;
图9是本发明CFB RNA抑制剂对食蟹猴肝脏组织CFB mRNA水平的影响示意图;Figure 9 is a schematic diagram showing the effect of the CFB RNA inhibitor of the present invention on the CFB mRNA level in the liver tissue of cynomolgus monkeys;
图10是本发明C5 RNA抑制剂对NHP食蟹猴C5蛋白抑制率的影响示意图;Figure 10 is a schematic diagram showing the effect of the C5 RNA inhibitor of the present invention on the inhibition rate of C5 protein in NHP cynomolgus monkeys;
图11是本发明C5 RNA抑制剂对NHP食蟹猴CH50活性保留水平的影响示意图;Figure 11 is a schematic diagram showing the effect of the C5 RNA inhibitor of the present invention on the retention level of CH50 activity in NHP cynomolgus monkeys;
图12是本发明C3 RNA抑制剂对NHP食蟹猴C3蛋白抑制率的影响示意图;Figure 12 is a schematic diagram showing the effect of the C3 RNA inhibitor of the present invention on the inhibition rate of C3 protein in NHP cynomolgus monkeys;
以下由特定的具体实施例说明本发明的实施方式,熟悉此技术的人士可由本说明书所公开的内容容易地了解本申请发明的其他优点及效果。The following is an explanation of the implementation of the present invention by means of specific embodiments. A person skilled in the art can easily understand other advantages and effects of the present invention from the contents disclosed in this specification.
术语定义Definition of terms
在本申请中,补体系统mRNA序列的实例容易利用已公开的数据库取得,例如,GenBank、UniProt、OMIM和猕猴(Macaca)基因组计划网站。In the present application, examples of complement system mRNA sequences are readily obtained using publicly available databases, such as GenBank, UniProt, OMIM and the Macaca Genome Project website.
术语“CFB”指补体因子B,其mRNA序列可见于例如,GenBank NM_001710.5;001710;食蟹猴NC_041757.1,小鼠NM_001142706和NM_008198;大鼠NM_212466.3。The term "CFB" refers to complement factor B, whose mRNA sequences can be found, for example, in GenBank NM_001710.5; 001710; cynomolgus monkey NC_041757.1, mouse NM_001142706 and NM_008198; rat NM_212466.3.
术语“C3”指补体C3,其mRNA序列可见于例如,GenBank NM_000064.4;食蟹猴NC_000019.10;小鼠NM_009778;大鼠NM_016994。The term "C3" refers to complement C3, whose mRNA sequence can be found, for example, in GenBank NM_000064.4; cynomolgus monkey NC_000019.10; mouse NM_009778; rat NM_016994.
术语“C5”指补体C5,其mRNA序列可见于例如,GenBank NM_001735.3;小鼠NM_013485;大鼠NM_057146。The term "C5" refers to complement C5, whose mRNA sequence can be found, for example, in GenBank NM_001735.3; mouse NM_013485; rat NM_057146.
“抑制CFB的表达”的判断指标包括:CFB基因的mRNA水平的抑制,CFB基因的蛋白水平的抑制等任何水平的抑制,还可以是:作为总溶血补体的量度的CH50活性、测量补体旁路途径的溶血活性的AH50、和/或作为血管内溶血的量度的乳酸脱氢酶(LDH)水平、和/或血红蛋白水平;还可以测量C3、C9、C5、C5a、C5b和可溶性C5b-9复合物的水平来评价CFB表达水平。Indicators for judging "inhibiting the expression of CFB" include: inhibition of the mRNA level of the CFB gene, inhibition of the protein level of the CFB gene, and any other level of inhibition; and may also be: CH50 activity as a measure of total hemolytic complement, AH50 for measuring the hemolytic activity of the complement alternative pathway, and/or lactate dehydrogenase (LDH) level as a measure of intravascular hemolysis, and/or hemoglobin level; the levels of C3, C9, C5, C5a, C5b and soluble C5b-9 complex may also be measured to evaluate the CFB expression level.
“抑制C3的表达”的判断指标包括:C3测定、总补体测定、免疫复合测定、C3血浆浓度测定、C3固定抗体法的测试;C3测定可以是C3基因的mRNA水平的抑制,或C3基因的蛋白水平的抑制等任何水平的抑制;C3测定可能与其他补体成分一起进行,以评估整个补体系统的功能。这通常包括测量C4浓度以及CH50等指标;免疫复合测定:免疫复合是由抗体和抗原组成的结构,在某些自身免疫疾病中形成。血清免疫复合测定可用来检测这些免疫复合,评估是否引起免疫系统的活化,导致C3的降低;C3血浆浓度测定:通过测量C3在血浆中的浓度来评估补体系统的功能。正常情况下,C3的浓度应该在正常范围内;C3固定抗体法:这种方法用于测量C3与特定抗原相结合的能力,以评估补体系统的功能。还可以是测量与C3基因水平相关的指标例如:作为总溶血补体的量度的CH50活性、测量补体旁路途径的溶血活性的AH50、和/或作为血管内溶血的量度的乳酸脱氢酶(LDH)水平、和/或血红蛋白水平。还可以测量CFB、C9、C5、C5a、C5b和可溶性C5b-9复合物的水平来评价C3表达。The judgment indicators of "inhibition of C3 expression" include: C3 determination, total complement determination, immune complex determination, C3 plasma concentration determination, and C3 fixed antibody method test; C3 determination can be any level of inhibition, such as inhibition of the mRNA level of the C3 gene, or inhibition of the protein level of the C3 gene; C3 determination may be performed together with other complement components to evaluate the function of the entire complement system. This usually includes measuring C4 concentration and indicators such as CH50; immune complex determination: immune complex is a structure composed of antibodies and antigens, which is formed in certain autoimmune diseases. Serum immune complex determination can be used to detect these immune complexes to evaluate whether they cause activation of the immune system, leading to a decrease in C3; C3 plasma concentration determination: evaluate the function of the complement system by measuring the concentration of C3 in plasma. Under normal circumstances, the concentration of C3 should be within the normal range; C3 fixed antibody method: This method is used to measure the ability of C3 to bind to specific antigens to evaluate the function of the complement system. It can also be to measure indices related to C3 gene levels such as CH50 activity as a measure of total hemolytic complement, AH50 to measure the hemolytic activity of the alternative complement pathway, and/or lactate dehydrogenase (LDH) levels as a measure of intravascular hemolysis, and/or hemoglobin levels. C3 expression can also be evaluated by measuring the levels of CFB, C9, C5, C5a, C5b, and soluble C5b-9 complexes.
“抑制C5的表达”的判断指标包括:C5基因的mRNA水平的抑制,C5基因的蛋白水平的抑制等任何水平的抑制,还可以是:作为总溶血补体的量度的CH50活性、测量补体旁路途径的溶血活性的AH50、和/或作为血管内溶血的量度的乳酸脱氢酶(LDH)水平、和/或血红蛋白水平;还可以测量C3、C9、C5、C5a、C5b和可溶性C5b-9复合物的水平来评价CFB表达水平。Indicators for judging "inhibiting the expression of C5" include: inhibition of the mRNA level of the C5 gene, inhibition of the protein level of the C5 gene, and any other level of inhibition; it can also be: CH50 activity as a measure of total hemolytic complement, AH50 for measuring the hemolytic activity of the complement alternative pathway, and/or lactate dehydrogenase (LDH) level as a measure of intravascular hemolysis, and/or hemoglobin level; the levels of C3, C9, C5, C5a, C5b and soluble C5b-9 complex can also be measured to evaluate the CFB expression level.
在本申请中,“靶序列”是指在补体系统基因转录过程中形成的mRNA分子的核苷酸序列的一个连续部分,包括作为原代转录产物的RNA加工的产物的mRNA。在一些实施方式中,序列的靶部分将是至少足够长的,以用作在补体系统基因转录过程中形成的mRNA分子的核苷酸序列的所述部分处或附近用于RNA抑制剂引导的降解的底物。“靶序列”的长度通常是约15-30个核苷酸。In the present application, "target sequence" refers to a continuous portion of the nucleotide sequence of the mRNA molecule formed during the transcription of the complement system gene, including mRNA that is the product of RNA processing of the primary transcription product. In some embodiments, the target portion of the sequence will be at least long enough to be used as a substrate for RNA inhibitor-guided degradation at or near the portion of the nucleotide sequence of the mRNA molecule formed during the transcription of the complement system gene. The length of the "target sequence" is generally about 15-30 nucleotides.
在本申请中,术语“RNA抑制剂”,通常指包含如本发明术语所定义的RNA的药剂,且其可通过RNA诱导沉默复合物(RISC)途径介导RNA转录物的靶向切割。经由称为RNA抑制的过程指导mRNA的序列特异性降解,调控(例如,抑制)补体系统基因在细胞(例如,受试者如哺乳动物受试者中的细胞)中的表达。In the present application, the term "RNA inhibitor" generally refers to an agent comprising RNA as defined in the present term, and which can mediate targeted cleavage of RNA transcripts through the RNA-induced silencing complex (RISC) pathway. Directing sequence-specific degradation of mRNA via a process known as RNA inhibition, regulating (e.g., inhibiting) expression of complement system genes in cells (e.g., cells in a subject such as a mammalian subject).
在一些实施方式中,RNA抑制剂可为引入细胞或生物体中来抑制靶mRNA(即补体系统基因)的单链siRNA(ssRNA抑制剂)。单链RNA抑制剂结合RISC内切核酸酶Argonaute 2,其然后切割靶mRNA。单链siRNA的长度一般为15至30个核苷酸且经化学修饰。In some embodiments, the RNA inhibitor can be a single-stranded siRNA (ssRNA inhibitor) introduced into a cell or organism to inhibit a target mRNA (i.e., a complement system gene). The single-stranded RNA inhibitor binds to the RISC endonuclease Argonaute 2, which then cleaves the target mRNA. Single-stranded siRNAs are generally 15 to 30 nucleotides in length and are chemically modified.
在一些实施方式中,本申请所使用的“RNA抑制剂”是双链RNA,且本发明中称为“双链RNA抑制剂”、“双链RNA(dsRNA,DS)分子”、“dsRNA剂”或“dsRNA”。术语“dsRNA”指核糖核酸分子的复合物,其具有包含两个反向平行且基本上互补的核酸链的双链体结构,称为具有相对于靶mRNA的“正义”和“反义”取向。在本申请的一些实施方式中,双链RNA(dsRNA)通过转录后基因沉默机制(本发明中称为RNA抑制或RNA干扰)触发靶mRNA的降解。In some embodiments, the "RNA inhibitor" used in the present application is a double-stranded RNA, and is referred to as a "double-stranded RNA inhibitor", "double-stranded RNA (dsRNA, DS) molecule", "dsRNA agent" or "dsRNA" in the present invention. The term "dsRNA" refers to a complex of ribonucleic acid molecules, which has a duplex structure comprising two antiparallel and substantially complementary nucleic acid chains, referred to as having "sense" and "antisense" orientations relative to the target mRNA. In some embodiments of the present application, double-stranded RNA (dsRNA) triggers the degradation of the target mRNA through a post-transcriptional gene silencing mechanism (referred to as RNA inhibition or RNA interference in the present invention).
双链体结构可为触发补体系统mRNA通过RISC途径的特异性降解的任何长度,且可在约15至36碱基对的长度范围内,例如,约15-30碱基对的长度,例如,约15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30或36碱基对的长度。在某些实施方式中,本申请的RNA抑制剂为15-30个核苷酸的dsRNA,其与靶序列相互作用以指导补体系统mRNA的切割。The duplex structure can be any length that triggers the specific degradation of complement system mRNA through the RISC pathway, and can be in the range of about 15 to 36 base pairs, for example, about 15-30 base pairs in length, for example, about 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30 or 36 base pairs in length. In certain embodiments, the RNA inhibitor of the present application is a dsRNA of 15-30 nucleotides that interacts with the target sequence to guide the cutting of the complement system mRNA.
通常,dsRNA分子的正义链和反义链大多数核苷酸为核糖核苷酸,但如本发明详细说明的,也可包括一个或多个非核糖核苷酸,例如,脱氧核糖核苷酸或修饰的核苷酸。此外,本说明书所涉及的RNA抑制剂可包括具有化学修饰的核糖核苷酸,可在多个区域上有修饰的核苷酸。本发明所用术语“修饰的核苷酸”意指独立地具有修饰的糖部分、修饰的核苷酸间连接或修饰的核碱基,或其任何组合的核苷酸。因此,术语“修饰的核苷酸”涵盖对核苷酸间连接、糖部分或核碱基的例如官能团或原子的置换、添加或移除。适用于本申请的RNA抑制剂的修饰包括本发明所公开或本领域已知的所有类型的修饰。Typically, most of the nucleotides in the sense strand and antisense strand of a dsRNA molecule are ribonucleotides, but as described in detail in the present invention, one or more non-ribonucleotides, such as deoxyribonucleotides or modified nucleotides, may also be included. In addition, the RNA inhibitors involved in this specification may include chemically modified ribonucleotides, and may have modified nucleotides in multiple regions. The term "modified nucleotides" used in the present invention means independently having a modified sugar moiety, a modified internucleotide connection or a modified nucleobase, or a nucleotide in any combination thereof. Therefore, the term "modified nucleotides" encompasses replacement, addition or removal of, for example, functional groups or atoms of internucleotide connections, sugar moieties or nucleobases. Modifications applicable to the RNA inhibitors of the present application include all types of modifications disclosed in the present invention or known in the art.
在本申请中,术语“核苷酸序列”通常是指一连串或一定顺序的核苷酸,无论是经修饰还是未修饰,使用标准核苷酸命名和本申请所述的经修饰的核苷酸的符号表用一连串字母描述。本申请所述的核苷酸序列是通过磷酸二酯键(或其相关的结构变体或合成类似物)连接组成的聚合物,包括天然产生的核苷酸聚合物,但应理解,该术语的范围也包括各种类似物,包括但不限于:肽核酸(PNA)、氨基磷酸酯、硫代磷酸酯、甲基膦酸酯和2'-O-甲基核糖核酸等。通常约有15-30个核苷酸,但该术语也可指任何长度的分子。In this application, the term "nucleotide sequence" generally refers to a series or a certain order of nucleotides, whether modified or unmodified, using standard nucleotide nomenclature and the symbol table of modified nucleotides described in this application as a series of letters. The nucleotide sequence described in this application is a polymer composed of phosphodiester bonds (or its related structural variants or synthetic analogs), including naturally occurring nucleotide polymers, but it should be understood that the scope of the term also includes various analogs, including but not limited to: peptide nucleic acids (PNA), aminophosphoroesters, thiophosphates, methylphosphonates and 2'-O-methyl ribonucleic acids, etc. There are usually about 15-30 nucleotides, but the term can also refer to molecules of any length.
在一些实施方式中,核苷酸序列包含一个或多个未修饰的核糖核苷(RNA)和/或未修饰的脱氧核糖核苷(DNA)和/或一个或多个修饰核苷酸。术语“修饰核苷酸序列”通常意指包含至少一个修饰和/或至少一个修饰的核苷酸间键联的一连串或一定顺序的核苷酸。In some embodiments, the nucleotide sequence comprises one or more unmodified ribonucleosides (RNA) and/or unmodified deoxyribonucleosides (DNA) and/or one or more modified nucleotides. The term "modified nucleotide sequence" generally means a series or a certain order of nucleotides comprising at least one modification and/or at least one modified internucleotide linkage.
在本申请中,术语“修饰的核苷酸”通常意指与天然存在的RNA或DNA核苷酸相比包含至少一个化学修饰。例如,2'-脱氧-胸苷酸2'-O-甲基修饰的核苷酸、2'-氟代修饰的核苷酸、2'-脱氧-修饰的核苷酸、锁定核苷酸、脱碱基核苷酸、2'-氨基-修饰的核苷酸、2'-O-长链烷基-修饰的核苷酸(如十六烷基)、吗啉代核苷酸、氨基磷酸酯核苷酸、非天然核碱基核苷酸、5'-硫代磷酸酯核苷酸以及连接有胆固醇基衍生物或十二烷酸二癸酰胺基团的核苷酸。In the present application, the term "modified nucleotides" generally means comprising at least one chemical modification compared to naturally occurring RNA or DNA nucleotides. For example, 2'-deoxy-thymidylic acid 2'-O-methyl modified nucleotides, 2'-fluoro-modified nucleotides, 2'-deoxy-modified nucleotides, locked nucleotides, abasic nucleotides, 2'-amino-modified nucleotides, 2'-O-long chain alkyl-modified nucleotides (such as hexadecyl), morpholino nucleotides, phosphoramidate nucleotides, non-natural core base nucleotides, 5'-phosphorothioate nucleotides, and nucleotides connected with cholesterol derivatives or dodecanoic acid didecylamide groups.
修饰的核苷酸包含修饰的糖基和/或修饰的核碱基。Modified nucleotides contain modified sugar groups and/or modified nucleobases.
在本申请中,术语“核碱基”或“碱基”通常意指杂环嘧啶或嘌呤化合物,它是所有核酸的组分且包括腺嘌呤、鸟嘌呤、胞嘧啶、胸腺嘧啶和尿嘧啶。核苷酸可包括经修饰的核苷酸或核苷酸模拟物、无碱基(Abasics)或替代物替代部分。术语“未修饰的核碱基”或“天然存在的核碱基”通常意指RNA或DNA的天然存在的杂环核碱基:嘌呤碱基腺嘌呤和鸟嘌呤;以及嘧啶碱基胸腺嘧啶、胞嘧啶和尿嘧啶。“修饰的核碱基”通常意指并非天然存在的核碱基的任何核碱基。In this application, the term "nucleobase" or "base" generally refers to a heterocyclic pyrimidine or purine compound, which is a component of all nucleic acids and includes adenine, guanine, cytosine, thymine and uracil. Nucleotides can include modified nucleotides or nucleotide mimetics, abasics or surrogate replacement parts. The term "unmodified nucleobase" or "naturally occurring nucleobase" generally refers to the naturally occurring heterocyclic nucleobases of RNA or DNA: the purine bases adenine and guanine; and the pyrimidine bases thymine, cytosine and uracil. "Modified nucleobase" generally refers to any nucleobase that is not a naturally occurring nucleobase.
在本申请中,术语“糖基”通常意指核苷酸的天然存在的糖基或修饰的糖基。术语“天然存在的糖基”通常意指如在天然存在的RNA中发现的呋喃核糖基或如在天然存在的DNA中发现的脱氧呋喃核糖基。“修饰的糖基”意指取代的糖基或糖替代物,例如在糖基2'位上有氟代或甲氧基取代。In this application, the term "sugar" generally refers to a naturally occurring sugar or a modified sugar of a nucleotide. The term "naturally occurring sugar" generally refers to a furanose ribosyl as found in naturally occurring RNA or a deoxyfuranose ribosyl as found in naturally occurring DNA. "Modified sugar" refers to a substituted sugar or sugar surrogate, for example, a fluoro or methoxy substitution at the 2' position of the sugar.
在本申请中,术语“核苷酸间键联”通常意指核苷酸序列中相邻核苷酸之间的共价键联。“天然存在的核苷酸间键联”意指3'至5'磷酸二酯键联。“修饰的核苷酸间键联”意指除了天然存在的核苷酸间键联之外的任何核苷酸间键联。In this application, the term "internucleotide linkage" generally means a covalent linkage between adjacent nucleotides in a nucleotide sequence. "Naturally occurring internucleotide linkage" means a 3' to 5' phosphodiester linkage. "Modified internucleotide linkage" means any internucleotide linkage other than a naturally occurring internucleotide linkage.
在本申请中,术语“反义链”(AS)通常是指RNA抑制剂(例如dsRNA)的包括与靶序列实质上互补的区域的链。在本发明中使用时,术语“互补性区域”通常指反义链上与本申请定义的序列(例如靶序列)实质上互补的区域。In the present application, the term "antisense strand" (AS) generally refers to a strand of an RNA inhibitor (e.g., dsRNA) that includes a region that is substantially complementary to a target sequence. When used in the present invention, the term "region of complementarity" generally refers to a region on the antisense strand that is substantially complementary to a sequence defined in the present application (e.g., a target sequence).
在本申请中,术语“正义链”(SS)通常是指RNA抑制剂(例如dsRNA)的这样一条链,所述链包括有与“反义链”(AS)的区域基本互补的区域。“正义”链有时被称为“有义”链,“过客”链或“反引导”链。借助正义链的序列,反义链靶向所希望的mRNA,同时正义链可能靶向不同靶标或被降解。因此,如果反义链被掺入RISC中,则正确的靶标被靶向。正义链的掺入可以导致脱靶效应。这些脱靶效应可以通过在正义链上使用修饰或使用5'端帽加以限制。In the present application, the term "sense strand" (SS) generally refers to a strand of an RNA inhibitor (e.g., dsRNA) that includes a region that is substantially complementary to the region of an "antisense strand" (AS). The "sense" strand is sometimes referred to as a "sense" strand, a "passenger" strand, or an "anti-guide" strand. With the sequence of the sense strand, the antisense strand targets the desired mRNA, while the sense strand may target different targets or be degraded. Therefore, if the antisense strand is incorporated into RISC, the correct target is targeted. The incorporation of the sense strand can result in off-target effects. These off-target effects can be limited by using modifications or using 5' end caps on the sense strand.
siRNA双链加载到ago蛋白必须先通过反义链的5'端识别启动,这是将双链的其余部分放入AGO蛋白与核酸结合通道的先决条件。AGO蛋白的MID结构域识别在5’末端的核苷酸,被识别后,siRNA双链加载到AGO蛋白与核酸结合通道形成pre-RISC。在将siRNA双链加载到核酸结合通道中后,pre-RISC将正义链(过客链)排放出来,与剩余的反义链(引导链)形成RISC。The loading of the siRNA double strand into the ago protein must first be initiated by the recognition of the 5' end of the antisense strand, which is a prerequisite for placing the rest of the double strand into the AGO protein and nucleic acid binding channel. The MID domain of the AGO protein recognizes the nucleotide at the 5' end. After being recognized, the siRNA double strand is loaded into the AGO protein and nucleic acid binding channel to form pre-RISC. After the siRNA double strand is loaded into the nucleic acid binding channel, pre-RISC discharges the sense strand (passenger strand) and forms RISC with the remaining antisense strand (guide strand).
在本申请中,术语“互补”是指两条核苷酸序列在一定条件下杂交,形成碱基对氢键,并形成双链体或双螺旋结构的能力。如RNA抑制剂反义链与RNA抑制剂正义链或补体系统mRNA杂交形成沃森-克里克碱基对(Watson-Crick base pairs)或非沃森-克里克碱基对,并且包括天然或经修饰的核苷酸或核苷酸模拟物。“互补”不必每个核苷上均具有核碱基互补性。相反,可以容忍一些错配。In this application, the term "complementary" refers to the ability of two nucleotide sequences to hybridize under certain conditions, form base pair hydrogen bonds, and form a duplex or double helix structure. For example, the antisense strand of an RNA inhibitor hybridizes with the sense strand of an RNA inhibitor or the complement system mRNA to form Watson-Crick base pairs or non-Watson-Crick base pairs, and includes natural or modified nucleotides or nucleotide mimetics. "Complementary" does not necessarily have nucleobase complementarity on each nucleoside. On the contrary, some mismatches can be tolerated.
在本申请中,术语“错配”,当互补性区域与靶序列不完全互补时,错配可以在核心区域或末端区域。通常,最被容许的错配在末端区域,例如,在5'端和/或3'端的5、4、3或2个核苷酸内,且不多于3个错配。In the present application, the term "mismatch" refers to when the complementary region is not completely complementary to the target sequence, and the mismatch can be in the core region or the terminal region. Usually, the most tolerated mismatch is in the terminal region, for example, within 5, 4, 3 or 2 nucleotides of the 5' end and/or the 3' end, and no more than 3 mismatches.
如Gu S,Jin L,Zhang F,Huang Y,Grimm D,Rossi JJ,Kay MA.Thermodynamic stability of small hairpin RNAs highly influences the loading process of different mammalian Argonautes.Proc Natl Acad Sci USA 2011,108:9208-9213.的研究结果表明,任何影响双链热力学稳定性的因素,如错配和非沃森-克里克碱基对,都有利于pre-RISC将正义链排出形成RISC。For example, the results of Gu S, Jin L, Zhang F, Huang Y, Grimm D, Rossi JJ, Kay MA. Thermodynamic stability of small hairpin RNAs highly influences the loading process of different mammalian Argonautes. Proc Natl Acad Sci USA 2011, 108: 9208-9213. indicate that any factors that affect the thermodynamic stability of the double helix, such as mismatches and non-Watson-Crick base pairs, are conducive to the pre-RISC expelling the sense chain to form RISC.
在本申请中,术语“配体”通常是指能够共价地或以其它化学方式与生物活性物质(如dsRNA)结合的任何化合物或分子。在一些实施方式中,配体能够与另一种化合物例如受体直接或间接地相互作用,与配体相互作用的受体可以存在于细胞表面上,或可替代地可以是细胞内和/或细胞间受体,配体与受体的相互作用可以导致生化反应,或可以仅仅是物理相互作用或结合。In this application, the term "ligand" generally refers to any compound or molecule that can covalently or otherwise chemically bind to a biologically active substance (such as dsRNA). In some embodiments, the ligand can interact directly or indirectly with another compound such as a receptor, and the receptor that interacts with the ligand can be present on the cell surface, or alternatively can be an intracellular and/or intercellular receptor, and the interaction of the ligand with the receptor can result in a biochemical reaction, or can be simply a physical interaction or binding.
在本申请中,术语“药学上可接受的”通常是指不抑制活性成分生物学活性的有效性的一种或多种无毒物质。这类制剂通常可含有盐、赋形剂、缓冲剂、防腐剂、相容性载体和任选的其它治疗剂。这类药学上可接受的制剂通常也可包含适合给予人的相容性固体或液体填料、稀释剂或包囊材料。用于医药时,盐应该是药学上可接受的盐,但可方便地使用非药学上可接受的盐来制备药学上可接受的盐,不能将它们排除在本申请范围以外。这类药理学和药学上可接受的盐包括但不限于由以下酸制备的盐:氢氯酸、氢溴酸、硫酸、硝酸、磷酸、马来酸、乙酸、水杨酸、柠檬酸、硼酸、甲酸、丙二酸、琥珀酸等。药学上可接受的盐也可制备成碱金属盐或碱土金属盐,如钠盐、钾盐或钙盐。In the present application, the term "pharmaceutically acceptable" generally refers to one or more non-toxic substances that do not inhibit the effectiveness of the biological activity of the active ingredient. Such preparations may generally contain salts, excipients, buffers, preservatives, compatible carriers and optional other therapeutic agents. Such pharmaceutically acceptable preparations may also generally contain compatible solid or liquid fillers, diluents or encapsulation materials suitable for administration to people. When used in medicine, salts should be pharmaceutically acceptable salts, but non-pharmaceutically acceptable salts can be conveniently used to prepare pharmaceutically acceptable salts, and they cannot be excluded from the scope of this application. Such pharmacological and pharmaceutically acceptable salts include, but are not limited to, salts prepared from the following acids: hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, maleic acid, acetic acid, salicylic acid, citric acid, boric acid, formic acid, malonic acid, succinic acid, etc. Pharmaceutically acceptable salts may also be prepared into alkali metal salts or alkaline earth metal salts, such as sodium salts, potassium salts or calcium salts.
在本申请中,术语“脂质纳米颗粒”或“LNP”通常指包含包封药理活性分子(如,dsRNA)的脂质层的囊泡。LNP描述于例如,中国专利号CN103189057B中,其完整内容以引用方式并入本发明中。In the present application, the term "lipid nanoparticle" or "LNP" generally refers to a vesicle comprising a lipid layer encapsulating a pharmacologically active molecule (e.g., dsRNA). LNP is described in, for example, Chinese Patent No. CN103189057B, the entire contents of which are incorporated herein by reference.
发明详述DETAILED DESCRIPTION OF THE INVENTION
一方面,本发明提供了一种抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐。In one aspect, the present invention provides an RNA inhibitor or a pharmaceutically acceptable salt thereof for inhibiting the expression of complement system genes.
siRNA设计siRNA design
采用自主设计的序列筛选软件筛选一组靶向人类补体系统基因的siRNA:CFB人类:GenBank NM_001710.5;C3人类:GenBank NM_000064.4;C5人类:GenBank NM_001735.3。A group of siRNAs targeting human complement system genes were screened using self-designed sequence screening software: CFB human: GenBank NM_001710.5; C3 human: GenBank NM_000064.4; C5 human: GenBank NM_001735.3.
CFB选用的一级序列如表1-1所示,C5选用的一级序列如表1-2所示:The primary sequence selected by CFB is shown in Table 1-1, and the primary sequence selected by C5 is shown in Table 1-2:
CFB选用的修饰的二级序列如表2-1所示,C5选用的二级序列如表2-2所示,C3选用的二级序列如表2-3所示:The modified secondary sequences selected by CFB are shown in Table 2-1, the secondary sequences selected by C5 are shown in Table 2-2, and the secondary sequences selected by C3 are shown in Table 2-3:
siRNA合成siRNA采用本领域已知的常规方法合成和退火。siRNA Synthesis siRNA was synthesized and annealed using conventional methods known in the art.
在某些实施方式中,其中所述反义链和正义链形成的双链体结构(互补区),所述互补区包括至少12、13、14、15、16、17、18、19、20或21个连续核苷酸。In certain embodiments, the duplex structure (complementary region) formed by the antisense strand and the sense strand comprises at least 12, 13, 14, 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides.
表1-1 CFB一级序列 Table 1-1 CFB primary sequence
表1-2 C5一级序列 Table 1-2 C5 primary sequence
表1-3 C3一级序列 Table 1-3 C3 primary sequence
其中n为a或u或g或c,g=鸟苷酸,a=腺苷酸,u=尿苷酸,c=胞苷酸,t=胸腺嘧啶脱氧核糖核苷酸。Wherein n is a or u or g or c, g = guanylate, a = adenylate, u = uridylate, c = cytidine, t = thymidine deoxyribonucleotide.
在一些筛选实施方案中,所述的RNAi剂的正义链和反义链选自表1中序列或与表1中的各序列相差一个、两个或三个核苷酸。In some screening embodiments, the sense strand and antisense strand of the RNAi agent are selected from the sequences in Table 1 or differ from each sequence in Table 1 by one, two or three nucleotides.
在一些实施方式中,表1中的正义链和表1中对应的反义链的碱基对互补形成dsRNA,可以部分互补,也可以完全互补。所述部分互补,可以是至少85%的碱基配对。In some embodiments, the base pairs of the sense strand in Table 1 and the corresponding antisense strand in Table 1 are complementary to form dsRNA, which may be partially complementary or completely complementary. The partial complementarity may be at least 85% base pairing.
在一些实施方式中,正义链、反义链的组合方式并非局限于表1的双链组合方式,表1中的其中一条正义链可以与任意一条反义链互补配对。In some embodiments, the combination of the sense strand and the antisense strand is not limited to the double-strand combination in Table 1, and one of the sense strands in Table 1 can be complementary to any antisense strand.
本发明旨在保护表1中序列的核心序列,核心序列为以上序列的任意一段至少是15个连续核苷酸的序列,其中至少15个是指15、16、17、18、19、20、21、22、23等个。在一些实施方式中,正义链如式(1):5′-X核心序列Y-3′,反义链与正义链之间至少有85%的碱基互补,X、Y包含0、1、2、3、4、5、6个核苷酸,在双链中末端位置可以容许0、1、2、3个不配对的碱基存在。The present invention aims to protect the core sequence of the sequence in Table 1, and the core sequence is any segment of the above sequence that is at least 15 consecutive nucleotides, wherein at least 15 refers to 15, 16, 17, 18, 19, 20, 21, 22, 23, etc. In some embodiments, the sense strand is as shown in formula (1): 5'-X core sequence Y-3', the antisense strand and the sense strand have at least 85% base complementarity, X and Y contain 0, 1, 2, 3, 4, 5, 6 nucleotides, and 0, 1, 2, 3 unpaired bases can be allowed to exist at the terminal position in the double strand.
反义链包含与式(2)的差异0、1、2或3个核苷酸的连续核苷酸,式(2):5′-X’核心序列Y’-3′,反义链与正义链之间至少有85%的碱基互补,X’、Y’包含0、1、2、3、4、5、6个核苷酸,在双链中末端位置可以容许0、1、2、3个不配对的碱基存在。The antisense strand contains consecutive nucleotides that differ from formula (2) by 0, 1, 2 or 3 nucleotides, formula (2): 5′-X′ core sequence Y′-3′, the antisense strand and the sense strand have at least 85% base complementarity, X′ and Y′ contain 0, 1, 2, 3, 4, 5, or 6 nucleotides, and 0, 1, 2, or 3 unpaired bases can be allowed to exist at the terminal positions in the double helix.
作为一种实施例,核心序列允许0、1、2、3个核苷酸的不同,该不同可以是按照华生-克里克(Watson-Crick)原则形成的碱基对,也可以是错配。As an example, the core sequence allows 0, 1, 2, or 3 nucleotide differences, which may be base pairs formed according to the Watson-Crick principle or mismatches.
在一些实施方式中,所述RNA抑制剂可以通过本领域技术人员所熟知的细胞转染方式或脂质体-核酸纳米颗粒的方式加药到细胞系中进行序列筛选。专利US9233971B2,US9080186B2,CN102985548B和CN103189057B有关脂质化合物及脂质体-核酸纳米颗粒制备的方法全文引入本说明书。In some embodiments, the RNA inhibitor can be added to the cell line for sequence screening by cell transfection or liposome-nucleic acid nanoparticles, which are well known to those skilled in the art. Patents US9233971B2, US9080186B2, CN102985548B and CN103189057B on lipid compounds and methods for preparing liposome-nucleic acid nanoparticles are fully introduced into this specification.
在一些实施方式中,其中所述的脂质化合物中的两性脂质优选大环脂类化合物D1C1、T1C1、T1C6、T4C4、B2C1、B2C6、B2C7和M10C1。In some embodiments, the amphoteric lipids in the lipid compound are preferably macrocyclic lipid compounds D1C1, T1C1, T1C6, T4C4, B2C1, B2C6, B2C7 and M10C1.
本领域技术人员公知,具有约20至23碱基对,例如,21碱基对的双链体结构的dsRNA已经被认为能特别有效地诱导RNA抑制(Elbashir等人,EMBO 2001,20:6877-6888)。然而,其他人已发现更短或更长的RNA双链体结构也有效(Chu和Rana(2007)RNA14:1714-1719;Kim等人(2005)Nat Biotech 23:222-226)。可以合理地预期,由表1、2中一个序列在一端或两端减去或增加几个核苷酸的双链体与所述dsRNA相比可以类似地有效。因此,具有源自表1、2中一个序列的至少15、16、17、18、19、20、21或更多个连续核苷酸的序列且在抑制补体系统基因表达的能力方面与包含全序列的dsRNA的差异不超过约5、10、15、20、25或30%的抑制的dsRNA均包括在本申请范围内。It is well known to those skilled in the art that dsRNAs having a duplex structure of about 20 to 23 base pairs, for example, 21 base pairs, have been found to be particularly effective in inducing RNA inhibition (Elbashir et al., EMBO 2001, 20: 6877-6888). However, others have found that shorter or longer RNA duplex structures are also effective (Chu and Rana (2007) RNA 14: 1714-1719; Kim et al. (2005) Nat Biotech 23: 222-226). It is reasonable to expect that a duplex with a few nucleotides minus or added at one or both ends of a sequence in Tables 1 and 2 can be similarly effective compared to the dsRNA. Thus, dsRNAs having a sequence of at least 15, 16, 17, 18, 19, 20, 21 or more consecutive nucleotides derived from a sequence in Tables 1 and 2 and differing by no more than about 5, 10, 15, 20, 25 or 30% in their ability to inhibit complement system gene expression from a dsRNA comprising the entire sequence are included within the scope of the present application.
本申请所述dsRNA可进一步包括一个或多个单链核苷酸突出端,例如,1、2、3或4个核苷酸。核苷酸突出端可包含核苷酸/核苷类似物或其组合,包括脱氧核苷酸。该突出端可在正义链、反义链或其组合上。此外,突出端的核苷酸可存在于dsRNA的反义链或正义链的5’端、3’端或两端。该突出端可由一条链长于另一条链形成,或由相同长度的两条链交错形成。当该突出端在反义链且可与补体系统mRNA形成错配或互补或可为另一个序列。例如,突出端位于正义链的3’端,或可选地,在反义链的3’端。The dsRNA described in the present application may further include one or more single-stranded nucleotide overhangs, for example, 1, 2, 3 or 4 nucleotides. The nucleotide overhangs may include nucleotides/nucleoside analogs or combinations thereof, including deoxynucleotides. The overhangs may be on the sense strand, the antisense strand or a combination thereof. In addition, the nucleotides of the overhangs may be present at the 5' end, 3' end or both ends of the antisense strand or sense strand of the dsRNA. The overhangs may be formed by one strand being longer than the other strand, or by two strands of the same length being staggered. When the overhangs are in the antisense strand and may form mismatches or complementarity with the complement system mRNA or may be another sequence. For example, the overhangs are located at the 3' end of the sense strand, or alternatively, at the 3' end of the antisense strand.
所述dsRNA还可以具有平端,平端意指在dsRNA该端处不存在不成对的核苷酸,即无核苷酸突出端。平端可位于反义链的5’端和正义链的3’端,反之亦然,或双端平端体,其整个长度上为双链的dsRNA,即,在分子的任一端处没有核苷酸突出端。The dsRNA may also have a blunt end, which means that there are no unpaired nucleotides at that end of the dsRNA, i.e., no nucleotide overhangs. The blunt end may be located at the 5' end of the antisense strand and the 3' end of the sense strand, or vice versa, or a double-ended blunt end, which is a double-stranded dsRNA over its entire length, i.e., there are no nucleotide overhangs at either end of the molecule.
在一些实施方式中,所述dsRNA的正义链或反义链在3’端具有核苷酸突出端,突出端含有1、2、3或4个核苷酸,而5’端是平端。In some embodiments, the sense strand or antisense strand of the dsRNA has a nucleotide overhang at the 3' end, the overhang contains 1, 2, 3 or 4 nucleotides, and the 5' end is blunt.
在一些实施方式中,突出端同时存在于正义链和反义链的3’端,突出端含有1、2、3或4个核苷酸,该突出端包括但不限于:TT、UU、AU或者UA。In some embodiments, the overhang is present at the 3' end of both the sense strand and the antisense strand, and the overhang contains 1, 2, 3 or 4 nucleotides, including but not limited to: TT, UU, AU or UA.
在一些实施方式中,所述dsRNA是19、21或23个核苷酸长度的双端平端体,其整个长度上为双链的dsRNA,即,在分子的任一端处没有核苷酸突出端。In some embodiments, the dsRNA is a double-ended blunt-ended dsRNA of 19, 21, or 23 nucleotides in length, which is double-stranded throughout its entire length, ie, there are no nucleotide overhangs at either end of the molecule.
在一些实施方式中,所述dsRNA具有21个核苷酸长度,且正义链和反义链在3’端均具有2个核苷酸的突出端。In some embodiments, the dsRNA is 21 nucleotides in length, and both the sense and antisense strands have 2 nucleotide overhangs at the 3' end.
为了增强本申请所述的RNA抑制剂在体内的稳定性,在不影响其活性甚至增强其活性的情况下,可以对所述RNA抑制剂的正义链和反义链进行修饰,其中的核苷酸可以有修饰基团,可以整条链或者部分修饰。在一些实施方式中,所述正义链和/或反义链上的一个或多个核苷酸被修饰以形成修饰的核苷酸。In order to enhance the in vivo stability of the RNA inhibitor described in the present application, the sense strand and antisense strand of the RNA inhibitor may be modified without affecting its activity or even enhancing its activity, wherein the nucleotides may have a modifying group, and the entire strand or a portion thereof may be modified. In some embodiments, one or more nucleotides on the sense strand and/or antisense strand are modified to form modified nucleotides.
在一些实施方式中,本申请所述的RNA抑制剂(例如,dsRNA)的正义链和反义链未修饰。在其他实施方式中,本申请所述的RNA抑制剂的正义链和反义链经本领域已知及本发明所述的化学修饰或偶联以加强稳定性或其他有利特性。本申请的其他实施方式中,本申请所述的RNA抑制剂的所有核苷酸或基本上所有核苷酸可以被修饰,即RNA抑制剂的链存在不超过5、4、3、2或1个未修饰的核苷酸。In some embodiments, the sense strand and antisense strand of the RNA inhibitor (e.g., dsRNA) described herein are unmodified. In other embodiments, the sense strand and antisense strand of the RNA inhibitor described herein are chemically modified or coupled as known in the art and as described herein to enhance stability or other favorable properties. In other embodiments of the application, all or substantially all nucleotides of the RNA inhibitor described herein may be modified, i.e., the strand of the RNA inhibitor has no more than 5, 4, 3, 2 or 1 unmodified nucleotides.
如本申请所述的RNA抑制剂的正义链和反义链可采用本领域上公知的方法合成和/或修饰,如那些描述于“Current protocols in nucleic acid chemistry”,Beaucage,S.L.等人(编辑),JohnWiley&Sons,Inc.,New York,NY,USA中的,其以引用方式并入本发明中。在本申请提供的RNA抑制剂中,所述RNA抑制剂的正义链和反义链均不需要均匀修饰,可在其单个核苷酸中掺入一种或一种以上的修饰。The sense strand and antisense strand of the RNA inhibitor as described in the present application can be synthesized and/or modified by methods known in the art, such as those described in "Current protocols in nucleic acid chemistry", Beaucage, S.L. et al. (eds.), John Wiley & Sons, Inc., New York, NY, USA, which is incorporated by reference into the present invention. In the RNA inhibitor provided in the present application, the sense strand and antisense strand of the RNA inhibitor do not need to be uniformly modified, and one or more modifications can be incorporated into their single nucleotides.
在一些实施方式中,核苷酸修饰包括:5’末端修饰核苷酸、3’末端修饰核苷酸、碱基修饰、糖修饰或糖的替代、主链修饰。5’端修饰指磷酸化、偶联、反向连接。3’端修饰指偶联、DNA核苷酸、反向连接等;碱基修饰指:用稳定碱基、去稳定碱基或与扩展的配偶体库碱基配对的碱基替换、去除碱基(无碱基核苷酸)或缀合的碱基。糖修饰一般是在2'位置或4'位置处。主链修饰是指:磷酸二酯键的修饰或替代。In some embodiments, nucleotide modifications include: 5' terminal modified nucleotides, 3' terminal modified nucleotides, base modifications, sugar modifications or sugar substitutions, and backbone modifications. 5' terminal modifications refer to phosphorylation, coupling, and reverse connection. 3' terminal modifications refer to coupling, DNA nucleotides, reverse connection, etc.; base modifications refer to: replacement with stable bases, destabilizing bases, or bases that pair with an extended partner library, removal of bases (basic nucleotides), or conjugated bases. Sugar modifications are generally at the 2' position or the 4' position. Main chain modifications refer to: modification or substitution of phosphodiester bonds.
具体的核苷酸修饰可以包括但不限于:5'端含磷基团核苷酸修饰、乙烯基膦酸酯脱氧核糖核苷酸、含乙烯基膦酸酯的核苷酸和含环丙基膦酸酯的核苷酸、3'末端脱氧胸腺嘧啶(dT)核苷酸、2'-O-甲基修饰的核苷酸、2'-氟修饰的核苷酸、2'-脱氧修饰的核苷酸、2'-氨基修饰的核苷酸、2'-O-烯丙基修饰的核苷酸、2'-C-烷基修饰的核苷酸、2'-羟基修饰的核苷酸、2'-甲氧基乙基修饰的核苷酸、2'-O-烷基修饰的核苷酸、2-O-(N-甲基乙酰胺)修饰的核苷酸、3’-O-甲氧基(2’核苷间连接)核苷酸、2’-F-阿拉伯糖核苷酸、5’-Me/2’-氟代核苷酸、锁定核苷酸、解锁核苷酸、解锁的核碱基类似物、构象限制性核苷酸、约束乙基核苷酸、无碱基核苷酸、吗啉代核苷酸、氨基磷酸酯、含有非天然碱基的核苷酸、四氢吡喃修饰的核苷酸、1,5-脱水己醇修饰的核苷酸、环己烯基修饰的核苷酸、含有甲基膦酸酯基的核苷酸、热不稳定核苷酸、GNA、脱氧核糖核苷酸、核苷酸类似物、吗啉代核苷酸、脱碱基核苷酸、3’至3’连接(倒置)核苷酸、桥接核苷酸、肽核酸(PNA)。Specific nucleotide modifications may include, but are not limited to, 5'-terminal phosphorus-containing nucleotide modifications, vinylphosphonate deoxyribonucleotides, vinylphosphonate-containing nucleotides and cyclopropylphosphonate-containing nucleotides, 3'-terminal deoxythymine (dT) nucleotides, 2'-O-methyl modified nucleotides, 2'-fluoro modified nucleotides, 2'-deoxy modified nucleotides, 2'-amino modified nucleotides, 2'-O-allyl modified nucleotides, 2'-C-alkyl modified nucleotides, 2'-hydroxy modified nucleotides, 2'-methoxyethyl modified nucleotides, 2'-O-alkyl modified nucleotides, 2-O-(N-methylacetamide) modified nucleotides, 3'-O-methoxy (2' internucleoside linkage) nucleotides, 2'-F-arabino nucleotides, 5'-Me/2'-fluoro nucleotides, locked nucleotides, unlocked nucleotides, unlocked nucleobase analogs, conformationally restricted nucleotides, constrained ethyl nucleotides, abasic nucleotides, morpholino nucleotides, phosphoramidates, nucleotides containing non-natural bases, tetrahydropyran-modified nucleotides, 1,5-anhydrohexanol-modified nucleotides, cyclohexenyl-modified nucleotides, methylphosphonate-containing nucleotides, thermally unstable nucleotides, GNA, deoxyribonucleotides, nucleotide analogs, morpholino nucleotides, abasic nucleotides, 3' to 3' linked (inverted) nucleotides, bridged nucleotides, peptide nucleic acids (PNAs).
5'端含磷基团核苷酸修饰可以是5'-磷酸酯的核苷酸或含有5'-磷酸酯类似物的核苷酸脱氧核苷酸;具有包括但不限于:5'端磷酸酯(5'-P)、5'端硫代磷酸酯(5'-PS)、5-'端硫代磷酸二酯(5'-PS2)、5'端乙烯基膦酸酯(5'-VP)、5'端甲基膦酸酯(MePhos)或5'-脱氧-5'-C-丙二酰当5'端含磷基团是5'端基乙烯基膦酸酯(5'-VP)时,5'-VP可以是5'-E-VP异构体(即反式乙烯基膦酸酯)、5'-Z-VP异构体(即顺式乙烯基磷酸酯)或其混合物。The 5'-terminal phosphorus-containing group modified nucleotide can be a 5'-phosphate nucleotide or a nucleotide deoxynucleotide containing a 5'-phosphate analog; having, but not limited to: 5'-terminal phosphate (5'-P), 5'-terminal phosphorothioate (5'-PS), 5-'-terminal phosphorothioate diester (5'-PS2), 5'-terminal vinyl phosphonate (5'-VP), 5'-terminal methyl phosphonate (MePhos) or 5'-deoxy-5'-C-malonyl. When the 5'-terminal phosphorus-containing group is 5'-terminal vinyl phosphonate (5'-VP), 5'-VP can be a 5'-E-VP isomer (i.e., trans-vinyl phosphonate), a 5'-Z-VP isomer (i.e., cis-vinyl phosphate) or a mixture thereof.
核苷酸间的修饰可以包括但不限于:硫代磷酸酯、手性硫代磷酸酯、二硫代磷酸酯、磷酸三酯、氨基烷基磷酸三酯、烷基膦酸酯、次膦酸酯、氨基磷酸酯、硫代羰基磷酰胺酯、硫代羰基烷基膦酸酯、硫代羰基烷基磷酸三酯、硼烷磷酸酯,也包含了各种盐、游离酸。Modifications between nucleotides may include, but are not limited to, phosphorothioates, chiral phosphorothioates, phosphorodithioates, phosphotriesters, aminoalkylphosphotriesters, alkyl phosphonates, phosphinates, phosphoramidates, thiocarbonylphosphoramidates, thiocarbonylalkylphosphonates, thiocarbonylalkylphosphotriesters, boranephosphates, and also include various salts and free acids.
正义链或反义链的末端修饰可以避免核酸外切酶降解,增强核酸酶稳定性,比如帽子结构:反向脱氧无碱基帽子(inverted deoxy abasiccap),缩写为invAb。invAb在本领域已是公知,具体的性能验证参考F.Czauderna,Nucleic Acids Res.,2003,31(11),2705-16。The end modification of the sense strand or antisense strand can avoid exonuclease degradation and enhance nuclease stability, such as the cap structure: inverted deoxy abasic cap (inverted deoxy abasic cap), abbreviated as invAb. invAb is well known in the art, and the specific performance verification can be found in F. Czauderna, Nucleic Acids Res., 2003, 31(11), 2705-16.
在一些实施方式中,其中所述反义链5’端开始的至少两个或两个以上偶数位上的核苷酸糖基2’位是氟。In some embodiments, the 2' position of the nucleotide sugar moiety at at least two or more even-numbered positions starting from the 5' end of the antisense strand is fluorine.
在一些实施方式中,所述反义链5’端开始的偶数位上的核苷酸糖基2’位全部是氟。In some embodiments, all 2' positions of the nucleotide sugars at the even-numbered positions starting from the 5' end of the antisense strand are fluorine.
在一些实施方式中,所述反义链5’端开始的第2、4、6、8、12、14位核苷酸糖基2’位中的至少一个是氟。例如,其中所述反义链5’端开始的第2、4、6、8、12、14位核苷酸糖基2’位均是氟。In some embodiments, at least one of the 2' positions of the nucleotide sugars at positions 2, 4, 6, 8, 12, and 14 starting from the 5' end of the antisense strand is fluorine. For example, the 2' positions of the nucleotide sugars at positions 2, 4, 6, 8, 12, and 14 starting from the 5' end of the antisense strand are all fluorine.
在一些实施方式中,所述反义链除了5’端开始的第2、6、8、10、14、16位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 2nd, 6th, 8th, 10th, 14th, and 16th nucleotides starting from the 5' end of the antisense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
在一些实施方式中,所述反义链除了5’端开始的第2、4、6、8、14、16位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 2nd, 4th, 6th, 8th, 14th, and 16th nucleotides starting from the 5' end of the antisense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
在一些实施方式中,其中所述反义链除了5’端开始的第2、4、6、8、14、16、18、20位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 2nd, 4th, 6th, 8th, 14th, 16th, 18th, and 20th nucleotides starting from the 5' end of the antisense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
在一些实施方式中,所述正义链5’端开始的奇数位上至少有两个或两个以上核苷酸糖基2’位是氟。In some embodiments, at least two or more nucleotide sugar groups at odd-numbered positions starting from the 5' end of the sense strand have fluorine at the 2' position.
在一些实施方式中,所述正义链5’端开始的奇数位上的核苷酸糖基2’位全部是氟。In some embodiments, the 2' positions of the nucleotide sugars at the odd-numbered positions starting from the 5' end of the sense strand are all fluorine.
在一些实施方式中,所述正义链5’端开始的第5、7、8、9位核苷酸糖基2’位中的至少一个是氟。例如,所述正义链5’端开始的第5、7、8、9位核苷酸糖基2’位均是氟。In some embodiments, at least one of the 2' positions of the 5th, 7th, 8th, and 9th nucleotide sugars starting from the 5' end of the sense strand is fluorine. For example, the 2' positions of the 5th, 7th, 8th, and 9th nucleotide sugars starting from the 5' end of the sense strand are all fluorine.
在一些实施方式中,所述正义链除了5’端开始的第5、7、8、9位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 5th, 7th, 8th, and 9th nucleotides starting from the 5' end of the sense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
在一些实施方式中,所述正义链5’端开始的第7、9、10、11位核苷酸糖基2’位中的至少一个是氟。例如,所述正义链5’端开始的第7、9、10、11位核苷酸糖基2’位均是氟。In some embodiments, at least one of the 2' positions of the sugar moieties at positions 7, 9, 10, and 11 starting from the 5' end of the sense strand is fluorine. For example, the 2' positions of the sugar moieties at positions 7, 9, 10, and 11 starting from the 5' end of the sense strand are all fluorine.
在一些实施方式中,所述正义链除了5’端开始的第7、9、10、11位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 7th, 9th, 10th, and 11th nucleotides starting from the 5' end of the sense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
在一些实施方式中,所述正义链5’端开始的第3、5、7、9、10、11、13、15位核苷酸糖基2’位中的至少一个是氟。例如,所述正义链5’端开始的第3、5、7、9、10、11、13、15位核苷酸糖基2’位均是氟。In some embodiments, at least one of the 2' positions of the nucleotide sugars at positions 3, 5, 7, 9, 10, 11, 13, and 15 starting from the 5' end of the sense strand is fluorine. For example, the 2' positions of the nucleotide sugars at positions 3, 5, 7, 9, 10, 11, 13, and 15 starting from the 5' end of the sense strand are all fluorine.
在一些实施方式中,所述正义链除了5’端开始的第3、5、7、9、10、11、13、15位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 3rd, 5th, 7th, 9th, 10th, 11th, 13th, and 15th nucleotides starting from the 5' end of the sense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
在一些实施方式中,所述正义链除了5’端开始的第7、8、9、10位核苷酸之外,其余的核苷酸糖基2’位中的至少一个是甲氧基。In some embodiments, except for the 7th, 8th, 9th, and 10th nucleotides starting from the 5' end of the sense strand, at least one of the 2' positions of the remaining nucleotide sugar groups is a methoxy group.
例如,所述正义链和/或反义链的部分或全部核苷酸糖基2’位的-OH可以被取代,其中,所述取代基团为氟或甲氧基,优选从正义链5’端开始的第9、10、11位的核苷酸糖基2’位是氟且从反义链的5’端开始的第2、4、6、12、14、16、18、20位核苷酸2’位是氟,其余的核苷酸糖基2’位均是甲氧基,或优选从正义链5’端开始的第5、7、8、9位的核苷酸2’位是氟且从反义链的5’端开始的第2、4、8、14、16位核苷酸糖基2’位是氟,其余的核苷酸糖基2’位均是甲氧基。For example, the -OH at the 2' position of some or all of the nucleotide sugar groups of the sense strand and/or antisense strand can be substituted, wherein the substituent group is fluorine or methoxy, preferably the 2' position of the nucleotide sugar groups at positions 9, 10, and 11 from the 5' end of the sense strand is fluorine, and the 2' position of the nucleotide sugar groups at positions 2, 4, 6, 12, 14, 16, 18, and 20 from the 5' end of the antisense strand is fluorine, and the 2' positions of the remaining nucleotide sugar groups are all methoxy, or preferably the 2' position of the nucleotides at positions 5, 7, 8, and 9 from the 5' end of the sense strand is fluorine, and the 2' position of the nucleotide sugar groups at positions 2, 4, 8, 14, and 16 from the 5' end of the antisense strand is fluorine, and the 2' positions of the remaining nucleotide sugar groups are all methoxy.
在一些实施方式中,所述正义链和/或反义链的核苷酸之间存在至少两个连续的硫代磷酸酯键。In some embodiments, there are at least two consecutive phosphorothioate bonds between nucleotides of the sense strand and/or antisense strand.
在一些实施方式中,所述正义链末端和/或反义链末端至少有一端的3个连续的核苷酸之间存在至少两个连续的硫代磷酸酯键。In some embodiments, at least two consecutive phosphorothioate bonds exist between three consecutive nucleotides at at least one end of the sense strand end and/or the antisense strand end.
例如,所述正义链和反义链的5’端和3’端的3个连续的核苷酸之间存在至少两个连续的硫代磷酸酯键。For example, there are at least two consecutive phosphorothioate bonds between three consecutive nucleotides at the 5' end and 3' end of the sense strand and the antisense strand.
又例如,从正义链5’端开始的第9、10、11位的核苷酸糖基2’位是氟且从反义链的5’端开始的第2、4、6、12、14、16、18、20位核苷酸糖基2’位是氟,其余的核苷酸糖基2’位均是甲氧基,并且所述正义链和反义链的5’端和3’端的3个连续的核苷酸之间存在至少两个连续的硫代磷酸酯键。For another example, the 2' position of the nucleotide sugar group at positions 9, 10, and 11 from the 5' end of the sense strand is fluorine, and the 2' position of the nucleotide sugar group at positions 2, 4, 6, 12, 14, 16, 18, and 20 from the 5' end of the antisense strand is fluorine, and the 2' position of the remaining nucleotide sugar groups are all methoxy, and there are at least two consecutive phosphorothioate bonds between three consecutive nucleotides at the 5' and 3' ends of the sense and antisense strands.
在一些实施方式中,所述正义链的部分核苷酸2’位是氟或甲氧基,且所述反义链的末端至少有3个相邻核苷酸之间的磷酸酯键可以被硫代。从正义链5’端开始的第5、7、8、9位或者第3、5、7、8、9、11、13、15的核苷酸2’位是氟,其余的核苷酸2’位是甲氧基,且所述反义链的末端至少有3个相邻核苷酸之间的磷酸酯键可以被硫代。In some embodiments, the 2' position of some nucleotides of the sense strand is fluorine or methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated. The 2' position of the 5th, 7th, 8th, 9th or the 3rd, 5th, 7th, 8th, 9th, 11th, 13th, 15th nucleotides starting from the 5' end of the sense strand is fluorine, and the 2' position of the remaining nucleotides is methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated.
在一些实施方式中,所述正义链的部分核苷酸2’位是氟或甲氧基,且所述反义链的末端至少有3个相邻核苷酸之间的磷酸酯键可以被硫代。从正义链5’端开始的第9、10、11位或者第3、5、7、8、9、11、13、15和/或17的核苷酸2’位是氟,其余的核苷酸2’位是甲氧基,且所述反义链的末端至少有3个相邻核苷酸之间的磷酸酯键可以被硫代。In some embodiments, the 2' position of some nucleotides of the sense strand is fluorine or methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated. The 2' position of the 9th, 10th, 11th or the 3rd, 5th, 7th, 8th, 9th, 11th, 13th, 15th and/or 17th nucleotides starting from the 5' end of the sense strand is fluorine, and the 2' position of the remaining nucleotides is methoxy, and at least three phosphate bonds between adjacent nucleotides at the end of the antisense strand can be thiolated.
在一些实施方式中,本发明所述的CFB修饰序列的RNA抑制剂选自下表2-1,C5修饰序列的RNA抑制剂选自下表2-2,C3修饰序列的RNA抑制剂选自下表2-3:In some embodiments, the RNA inhibitor of the CFB modified sequence of the present invention is selected from the following Table 2-1, the RNA inhibitor of the C5 modified sequence is selected from the following Table 2-2, and the RNA inhibitor of the C3 modified sequence is selected from the following Table 2-3:
表2-1 CFB修饰序列的RNA抑制剂 Table 2-1 RNA inhibitors with CFB modified sequences
表2-2 C5修饰序列的RNA抑制剂 Table 2-2 RNA inhibitors with C5 modified sequences
表2-3 C3修饰序列的RNA抑制剂 Table 2-3 RNA inhibitors with C3 modified sequences
其中,G=2'-O-甲基鸟苷酸,A=2'-O-甲基腺苷酸,U=2'-O-甲基尿苷酸,C=2'-O-甲基胞苷酸;Gs=2'-O-甲基-3’-硫代鸟苷酸,As=2'-O-甲基-3'-硫代腺苷酸,Us=2'-O-甲基-3'-硫代尿苷酸,Ts=2'-O-甲基-3'-硫代胸苷酸,Cs=2'-O-甲基-3'-硫代胞苷酸;fG=2'-氟鸟苷酸,fA=2'-氟腺苷酸,fU=2'-氟尿苷酸,fC=2'-氟胞苷酸,fT=2'-氟胸苷酸;fGs=2'-氟-3'-硫代鸟苷酸,fAs=2'-氟-3'-硫代腺苷酸,fUs=2'-氟-3'-硫代尿苷酸,fCs=2'-氟-3'-硫代胞苷酸,T=脱氧胸苷酸,dA=2'-脱氧-腺苷酸,invAb为反向脱氧无碱基帽子(inverted deoxy abasiccap),Tgn为乙二醇脱氧胸苷酸。Among them, G = 2'-O-methylguanylate, A = 2'-O-methyladenylate, U = 2'-O-methyluridylate, C = 2'-O-methylcytidine; Gs = 2'-O-methyl-3'-thioguanylate, As = 2'-O-methyl-3'-thioadenylate, Us = 2'-O-methyl-3'-thiouridylate, Ts = 2'-O-methyl-3'-thiothymidylate, Cs = 2'-O-methyl-3'-thiocytidine; fG = 2'-fluoroguanylate, fA = 2'-fluoroadenylate, fU = 2'-O-methyl-3'-thioguanylate =2'-fluorouridine, fC =2'-fluorocytidine, fT =2'-fluorothymidine; fGs =2'-fluoro-3'-thioguanylate, fAs =2'-fluoro-3'-thioadenylate, fUs =2'-fluoro-3'-thiouridylate, fCs =2'-fluoro-3'-thiocytidine, T = deoxythymidine, dA =2'-deoxy-adenylate, invAb is inverted deoxy abasic cap, Tgn is glycol deoxythymidine.
在一些实施方式中,本发明所述的RNA抑制剂的正义链或反义链为与表1至表2中正义链或反义链具有相同的至少15个连续核苷酸的序列,或相差一个、两个或三个核苷酸的序列。In some embodiments, the sense strand or antisense strand of the RNA inhibitor described in the present invention has a sequence of at least 15 consecutive nucleotides identical to the sense strand or antisense strand in Tables 1 to 2, or a sequence that differs by one, two or three nucleotides.
在一些实施方式中,通过在载体中引入靶组织受体的配体,以改变RNA抑制剂的分布、靶向或稳定性。例如,与不存在配体的物种相比,专属性的配体可以提供针对所选靶(例如分子、细胞或细胞类型、区室(例如细胞或器官区室、身体组织、器官或区域))的增强的亲和力。In some embodiments, the distribution, targeting or stability of the RNA inhibitor is altered by introducing a ligand for a target tissue receptor into the vector. For example, a specific ligand can provide enhanced affinity for a selected target (e.g., a molecule, a cell or cell type, a compartment (e.g., a cell or organ compartment, a body tissue, an organ or region)) compared to a species in which the ligand is not present.
配体可以包括天然存在的物质,如蛋白质(例如人血清白蛋白(HSA)、低密度脂蛋白(LDL)或球蛋白);碳水化合物(例如葡聚糖、茁霉多糖、壳多糖、壳聚糖、菊糖、环糊精、N-乙酰葡糖胺、N-乙酰半乳糖胺或透明质酸);或脂质。配体也可以是重组或合成分子,如合成聚合物,例如合成的聚氨基酸。The ligand can include naturally occurring substances, such as proteins (e.g., human serum albumin (HSA), low-density lipoprotein (LDL) or globulin); carbohydrates (e.g., dextran, pullulan, chitin, chitosan, inulin, cyclodextrin, N-acetylglucosamine, N-acetylgalactosamine or hyaluronic acid); or lipids. The ligand can also be a recombinant or synthetic molecule, such as a synthetic polymer, for example a synthetic polyamino acid.
配体也可以包括靶向基团,例如与指定的细胞类型如肾细胞结合的细胞或组织靶向剂,例如凝集素、糖蛋白、脂质或蛋白质,例如抗体。靶向基团可以是促甲状腺激素、促黑素、凝集素、糖蛋白、表面活性蛋白质A、黏蛋白碳水化合物、多价乳糖、多价半乳糖、N-乙酰基-半乳糖胺、N-乙酰基-葡糖胺多价甘露糖、多价岩藻糖、糖基化聚氨基酸、多价半乳糖、转铁蛋白、双膦酸盐、聚谷氨酸、聚天冬氨酸、脂质、胆固醇、类固醇、胆酸、叶酸、维生素B12、维生素A、生物素、或RGD肽或RGD肽模拟物。在一些实施方式中,该配体为多价半乳糖,例如,N-乙酰基-半乳糖胺。The ligand can also include a targeting group, such as a cell or tissue targeting agent that is combined with a specified cell type such as a kidney cell, such as a lectin, a glycoprotein, a lipid or a protein, such as an antibody. The targeting group can be thyrotropin, melanocyte stimulating hormone, a lectin, a glycoprotein, a surfactant protein A, a mucin carbohydrate, a multivalent lactose, a multivalent galactose, N-acetyl-galactosamine, N-acetyl-glucosamine multivalent mannose, a multivalent fucose, a glycosylated polyamino acid, a multivalent galactose, transferrin, a bisphosphonate, polyglutamic acid, polyaspartic acid, a lipid, cholesterol, a steroid, bile acid, folic acid, vitamin B12, vitamin A, biotin, or an RGD peptide or RGD peptide mimetic. In some embodiments, the ligand is a multivalent galactose, such as N-acetyl-galactosamine.
本发明所述的RNA抑制剂所包含的正义链和反义链可以通过固相合成的公知技术方便且常规地制备。可另外地或替代地使用本领域中已知的用于这类合成的任何其他方法,如液相合成或发酵。The sense strand and antisense strand contained in the RNA inhibitor of the present invention can be conveniently and routinely prepared by the well-known technique of solid phase synthesis. Any other method known in the art for such synthesis, such as liquid phase synthesis or fermentation, can be used additionally or alternatively.
在一些实施方式中,除了可商购以及常规使用的标准核苷亚磷酰胺单体以及非标准核苷亚磷酰胺单体之外,本申请的RNA抑制剂所包含的正义链和反义链可以通过自动合成仪使用衍生自载体-核苷亚磷酰胺单体的亚磷酰胺法合成。In some embodiments, in addition to commercially available and conventionally used standard nucleoside phosphoramidite monomers and non-standard nucleoside phosphoramidite monomers, the sense strand and antisense strand contained in the RNA inhibitor of the present application can be synthesized by an automatic synthesizer using a phosphoramidite method derived from a carrier-nucleoside phosphoramidite monomer.
在一些实施方式中,本发明所述配体通过载体结构偶联于反义链的5’端和/或3’端,和/或正义链的5’端和/或3’端。In some embodiments, the ligand described in the present invention is coupled to the 5' end and/or 3' end of the antisense chain, and/or the 5' end and/or 3' end of the sense chain through a carrier structure.
例如,所述载体结构可以偶联于正义链的5’端和/或3’端;或所述载体结构可以偶联于反义链的5’端且所述载体结构偶联于正义链的3’端;或所述载体结构可以偶联于反义链的3’端,且所述配体偶联于正义链的5’端。For example, the carrier structure can be coupled to the 5' end and/or the 3' end of the sense strand; or the carrier structure can be coupled to the 5' end of the antisense strand and the carrier structure can be coupled to the 3' end of the sense strand; or the carrier structure can be coupled to the 3' end of the antisense strand and the ligand can be coupled to the 5' end of the sense strand.
在一些实施方式中,所述载体结构包括5’MVIP和3’MVIP,其中,所述5’MVIP偶联在所述正义链和/或反义链5’端,所述3’MVIP偶联在所述反义链和/或正义链3’端,所述5’MVIP的结构如式I所示,所述3’MVIP结构如式II所示,In some embodiments, the carrier structure includes 5'MVIP and 3'MVIP, wherein the 5'MVIP is coupled to the 5' end of the sense strand and/or the antisense strand, and the 3'MVIP is coupled to the 3' end of the antisense strand and/or the sense strand, the structure of the 5'MVIP is as shown in Formula I, and the structure of the 3'MVIP is as shown in Formula II.
(X-L)n-B-D-R1-,(XL) n -BDR 1 -,
II
(X-L)m-B-D-R2-,(XL) m - BDR2- ,
IIII
其中,in,
X为肝靶向特异性配体;X is a liver-targeting specific ligand;
L为支链;L is a branched chain;
B为接头;B is a connector;
D为连接链;D is the connecting chain;
R1和R2为转接点;R 1 and R 2 are transfer points;
所述5’MVIP通过转接点R1与正义链5’端或反义链5’端连接,所述3’MVIP通过转接点R2与正义链3’端或反义链3’端连接,n和m各自独立地为0-4的任意整数,且n+m=2-6的整数,优选n+m=2、3或4,更优选为4。The 5'MVIP is connected to the 5' end of the sense strand or the 5' end of the antisense strand through the transfer point R1 , and the 3'MVIP is connected to the 3 ' end of the sense strand or the 3' end of the antisense strand through the transfer point R2, n and m are each independently any integer from 0 to 4, and n+m=an integer from 2 to 6, preferably n+m=2, 3 or 4, and more preferably 4.
在一些实施方式中,所述R1或R2与所述正义链或反义链的连接通过磷酸酯或经修饰的磷酸酯,R1或R2优选地通过磷酸酯或硫代磷酸酯与所述正义链或反义链相连接。In some embodiments, the connection between R 1 or R 2 and the sense strand or antisense strand is through phosphate or modified phosphate, and R 1 or R 2 is preferably connected to the sense strand or antisense strand through phosphate or phosphorothioate.
在一些实施方式中,m或n可以为0,即不存在3’MVIP或5’MVIP。In some embodiments, m or n may be 0, i.e., there is no 3'MVIP or 5'MVIP.
在一些实施方式中,当n=0(即不存在5’MVIP)时,所述3’MVIP的结构可以为: In some embodiments, when n=0 (ie, there is no 5'MVIP), the structure of the 3'MVIP may be:
在一些实施方式中,当n=1时,所述3’MVIP的结构可以为: In some embodiments, when n=1, the structure of the 3'MVIP may be:
在一些实施方式中,当n=2时,所述3’MVIP的结构可以为: In some embodiments, when n=2, the structure of the 3'MVIP may be:
在一些实施方式中,当n=3时,所述3’MVIP的结构可以为: In some embodiments, when n=3, the structure of the 3'MVIP may be:
在一些实施方式中,当n=4时,所述3’MVIP的结构可以为: In some embodiments, when n=4, the structure of the 3'MVIP may be:
在一些实施方式中,所述的n是指同时放在所述RNA抑制剂的正义链和反义链5’端5'MVIP中n之和,所述的m是指同时放在所述RNA抑制剂的正义链和反义链3’端3'MVIP中m之和。In some embodiments, the n refers to the sum of the n placed in the 5'MVIP at the 5' end of the sense strand and the antisense strand of the RNA inhibitor, and the m refers to the sum of the m placed in the 3'MVIP at the 3' end of the sense strand and the antisense strand of the RNA inhibitor.
在一些实施方式中,所述R1和R2结构中带有-NH-、-S-和/或-O-,R1和R2通过结构中-NH-、-S-或-O-分别与连接链D以及正义链和/或反义链5’端和3’端相连,R1和R2相同或不相同。In some embodiments, the R1 and R2 structures contain -NH-, -S- and/or -O-, and R1 and R2 are connected to the connecting chain D and the 5' end and 3' end of the sense chain and/or antisense chain respectively through the -NH-, -S- or -O- in the structure, and R1 and R2 are the same or different.
在一些实施方式中,所述R1和R2是任选直碳链,或带有酰胺基、羧基或烷基类支链的直碳链或者环状结构,所述环状结构包括饱和或不饱和的脂肪族碳环基,或者含有硫、氧或氮原子的五元或六元杂环基或芳香烃基。In some embodiments, R1 and R2 are optionally straight carbon chains, or straight carbon chains with amide, carboxyl or alkyl branches, or cyclic structures, wherein the cyclic structure includes a saturated or unsaturated aliphatic carbocyclic group, or a five-membered or six-membered heterocyclic group or aromatic hydrocarbon group containing sulfur, oxygen or nitrogen atoms.
在一些实施方式中,所述R1和/或R2为-E1(CH2)xCH2E2-,其中x为3-12的任意整数,基团E1和E2可以分别为-NH-、-S-或-O-。In some embodiments, R 1 and/or R 2 is -E 1 (CH 2 ) x CH 2 E 2 -, wherein x is any integer from 3 to 12, and the groups E 1 and E 2 can be -NH-, -S- or -O-, respectively.
在一些实施方式中,所述R1和/或R2为-E1(CH2)x1CH(OH)(CH2)x2E2-,其中x1或x2各自独立地为3-10的任意整数,E1和E2可以分别为-NH-、-S-或-O-。In some embodiments, R1 and/or R2 is -E1 ( CH2 ) x1CH (OH)( CH2 ) x2E2- , wherein x1 or x2 is each independently any integer from 3 to 10, and E1 and E2 can be -NH-, -S- or -O-, respectively.
在一些实施方式中,所述R1为如下所示的含有N、S或O的杂环或碳环结构: In some embodiments, the R 1 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
在一些实施方式中,所述转接点R1为-NH(CH2)xCH2O-,其中x为3-12的任意整数,优选为4-6的任意整数,可以通过以下两种亚磷酰胺单体的方式引入。In some embodiments, the transition point R1 is -NH( CH2 ) xCH2O- , wherein x is any integer from 3 to 12, preferably any integer from 4 to 6, and can be introduced by the following two phosphoramidite monomers.
i.R1结构中的一个-O-或-S-用于R1亚磷酰胺单体的合成,通过固相合成的方法接入RNA抑制剂正义链或反义链的5’端。结构中-NH-、-S-或-O-用于与5'MVIP中的连接链D连接,从而在RNA抑制剂中的正义链或反义链的5’端引入肝靶向特异性配体X。引入到RNA抑制剂正义链或反义链5’端的单体示例性结构如下: One -O- or -S- in the iR 1 structure is used for the synthesis of the R 1 phosphoramidite monomer, which is connected to the 5' end of the sense chain or antisense chain of the RNA inhibitor by solid phase synthesis. The -NH-, -S- or -O- in the structure is used to connect with the connecting chain D in the 5'MVIP, thereby introducing the liver-targeting specific ligand X at the 5' end of the sense chain or antisense chain in the RNA inhibitor. The exemplary structure of the monomer introduced into the 5' end of the sense chain or antisense chain of the RNA inhibitor is as follows:
在一些实施方式中,优选以下结构: In some embodiments, the following structures are preferred:
ii.R1结构中的一个-NH-、-S-或-O-先与连接链D连接,另外一个-NH-、-S-或-O-用于5'MVIP亚磷酰胺单体的合成中与亚磷酰胺成酯,正义链或反义链5’MVIP亚磷酰胺单体结构示例如下: ii. One -NH-, -S- or -O- in the R1 structure is first connected to the connecting chain D, and the other -NH-, -S- or -O- is used to form an ester with the phosphoramidite in the synthesis of the 5'MVIP phosphoramidite monomer. The structure of the sense chain or antisense chain 5'MVIP phosphoramidite monomer is exemplified as follows:
在一些实施方式中,正义链或反义链5’MVIP亚磷酰胺单体优选以下结构: In some embodiments, the 5'MVIP phosphoramidite monomer of the sense strand or antisense strand preferably has the following structure:
当通式中n为1-4时,所述的单体中接头B部分分别支化1至4次,以获得对应的单体化合物,借助所述的单体化合物,肝靶向特异性配体X通过固相合成被引入到正义链或反义链5’端。When n in the general formula is 1-4, the linker B part in the monomer is branched 1 to 4 times to obtain the corresponding monomer compound. With the help of the monomer compound, the liver-targeting specific ligand X is introduced into the 5' end of the sense chain or the antisense chain through solid phase synthesis.
在一些实施方式中,所述转接点R1为-NH(CH2)xCH2O-,其中x可以是3-12的任意整数,优选为4-6的任意整数。In some embodiments, the transition point R1 is -NH( CH2 ) xCH2O- , wherein x can be any integer from 3 to 12 , preferably any integer from 4 to 6.
在一些实施方式中,5'MVIP亚磷酰胺单体结构选自如下结构中: In some embodiments, the 5'MVIP phosphoramidite monomer structure is selected from the following structures:
在一些实施方式中,所述转接点R2为如下所示的含有N、S或O的杂环或碳环结构: In some embodiments, the transition point R2 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
在一些实施方式中,所述转接点R2为-NH(CH2)x1CH(OH)(CH2)x2CH2O-,其中x1为1-4的任意整数,x2为0-4的任意整数。In some embodiments, the transition point R2 is -NH( CH2 ) x1CH (OH)( CH2 ) x2CH2O- , wherein x1 is any integer from 1 to 4, and x2 is any integer from 0 to 4.
本申请所述的转接点R2是通过丁二酸酐与R2结构中-NH-、-S-或-O-成酯或酰胺的同时,又与空白Solid Support中-NH-进行偶联,形成3'MVIP solid spport,再通过亚磷酰胺固相合成法,将3’MVIP引入到正义链或反义链的3’端。The transfer point R2 described in the present application is formed by esterification or amide formation between succinic anhydride and -NH-, -S- or -O- in the R2 structure, and at the same time, coupling with -NH- in the blank Solid Support to form a 3'MVIP solid spport, and then introducing 3'MVIP into the 3' end of the sense chain or antisense chain through the phosphoramidite solid phase synthesis method.
在一些实施方式中,所述转接点R2结构中的杂环为吡咯环或哌啶环,其通过环中的氮杂原子与3'MVIP的连接链D连接,引入3'MVIP solid spport示例性结构如下: In some embodiments, the heterocyclic ring in the transition point R2 structure is a pyrrole ring or a piperidine ring, which is connected to the connecting chain D of 3'MVIP through the nitrogen heteroatom in the ring. The exemplary structure of the introduced 3'MVIP solid spport is as follows:
当通式中m为1-4时,所述的单体中接头B部分分别支化1至4次,以获得对应的Solid Support。When m in the general formula is 1-4, the connector B part in the monomer is branched 1 to 4 times to obtain the corresponding Solid Support.
在一些实施方式中,所述转接点R2为-B4(CH2)x1CH(OH)(CH2)x2CH2B5-,其中x1为1-4的任意整数,x2为0-4的任意整数,B4和B5分别为-NH-、-S-或-O-,引入3’MVIP solid spport示例性结构如下: In some embodiments, the transition point R2 is -B4 ( CH2 ) x1CH (OH)( CH2 ) x2CH2B5- , wherein x1 is any integer from 1 to 4 , x2 is any integer from 0 to 4, B4 and B5 are -NH-, -S- or -O-, respectively, and the exemplary structure of the introduced 3'MVIP solid spport is as follows:
当通式中m为1-4时,所述的单体中接头B部分分别支化1至4次,以获得对应的Solid Support。When m in the general formula is 1-4, the connector B part in the monomer is branched 1 to 4 times to obtain the corresponding Solid Support.
在一些实施方式中,R2为-NHCH2CH(OH)CH2O-,引入3’MVIP solid spport示例性结构如下: In some embodiments, R 2 is -NHCH 2 CH(OH)CH 2 O-, and the exemplary structure of the introduced 3'MVIP solid spport is as follows:
当通式中m为1-4时,所述的单体中接头B部分分别支化1至4次,以获得对应的Solid Support。When m in the general formula is 1-4, the connector B part in the monomer is branched 1 to 4 times to obtain the corresponding Solid Support.
在一些实施方式中,3’MVIP solid support结构如下: In some embodiments, the 3'MVIP solid support structure is as follows:
在一些实施方式中,所述肝靶向特异性配体X选自用于增强肝细胞对RNA抑制剂的摄取的结构,可以是脂质、类固醇、维生素、糖、蛋白质、肽、多胺及肽模拟结构。在本申请提供的RNA抑制剂中,引入所述RNA抑制剂正义链或反义链末端的肝靶向特异性配体X可以相同,也可以不同,例如在特性上,有些可以是增强肝靶向性,有些可以是所述RNA抑制剂在体内药代动力学的调节结构,有些可以是具有体内溶解活性的结构。在一些实施方式中,所述肝靶向特异性配体X选自以下结构中的一种或多种单糖及其衍生物。In some embodiments, the liver-targeting specific ligand X is selected from structures used to enhance the uptake of RNA inhibitors by hepatocytes, and may be lipids, steroids, vitamins, sugars, proteins, peptides, polyamines, and peptide mimetic structures. In the RNA inhibitors provided in the present application, the liver-targeting specific ligands X introduced into the ends of the sense strand or antisense strand of the RNA inhibitor may be the same or different. For example, in terms of properties, some may be structures that enhance liver targeting, some may be structures that regulate the pharmacokinetics of the RNA inhibitor in vivo, and some may be structures that have in vivo dissolution activity. In some embodiments, the liver-targeting specific ligand X is selected from one or more monosaccharides and their derivatives in the following structures.
在一些实施方式中,所述单糖选自以下结构中的一种或多种:甘露糖、半乳糖、D-阿拉伯糖、葡萄糖、果糖、木糖、葡糖胺、核糖。所述单糖衍生物选自甘露糖衍生物、半乳糖衍生物、葡萄糖衍生物、核糖衍生物以及其他衍生物。In some embodiments, the monosaccharide is selected from one or more of the following structures: mannose, galactose, D-arabinose, glucose, fructose, xylose, glucosamine, ribose. The monosaccharide derivative is selected from mannose derivatives, galactose derivatives, glucose derivatives, ribose derivatives and other derivatives.
在一些实施方式中,所述肝靶向特异性配体X选自半乳糖、半乳糖胺、N-乙酰半乳糖胺及其衍生物,其结构通式如下: In some embodiments, the liver-targeting specific ligand X is selected from galactose, galactosamine, N-acetylgalactosamine and derivatives thereof, and its general structural formula is as follows:
其中,W1为氢或羟基保护基,可以相同也可以不同;W为-OH、-NHCOOH或-NHCO(CH2)qCH3,其中q为0-4的整数;W2为-NH-、O、S或C。Wherein, W1 is hydrogen or a hydroxyl protecting group, which may be the same or different; W is -OH, -NHCOOH or -NHCO( CH2 ) qCH3 , wherein q is an integer of 0-4; W2 is -NH-, O, S or C.
在一些实施方式中,所述肝靶向特异性配体X为N-乙酰半乳糖胺及其衍生物。In some embodiments, the liver-targeting specific ligand X is N-acetylgalactosamine and its derivatives.
在一些实施方式中,所述肝靶向特异性配体X选自以下结构: In some embodiments, the liver-targeting specific ligand X is selected from the following structures:
其中,W选自-OH、-NHCOOH或-NHCO(CH2)qCH3中的一种或两种,其中q为0-4的整数。Wherein, W is selected from one or two of -OH, -NHCOOH or -NHCO(CH 2 ) q CH 3 , wherein q is an integer of 0-4.
在一些实施方式中,所述肝靶向特异性配体X在同一个5'MVIP或3'MVIP结构中可以相同,也可以不同。In some embodiments, the liver-targeting specific ligand X in the same 5'MVIP or 3'MVIP structure may be the same or different.
在一些实施方式中,5'MVIP与3'MVIP彼此之间的X可以相同,也可以不同。In some embodiments, X between 5'MVIP and 3'MVIP may be the same or different.
在一些实施方式中,所述支链L是含有-NH-、-C(=O)-、-O-、-S-、酰胺基、磷酰基、硫代磷酰基、C4-C10脂肪族碳环基、苯基或者这些基团的组合的C4-C18碳链。In some embodiments, the branched chain L is a C 4 -C 18 carbon chain containing -NH-, -C(=O)-, -O-, -S-, an amide group, a phosphoryl group, a thiophosphoryl group, a C 4 -C 10 aliphatic carbocyclic group, a phenyl group, or a combination of these groups.
在一些实施方式中,所述支链L还带有羟乙基或羧酸类的侧链。In some embodiments, the branched chain L further has a hydroxyethyl group or a carboxylic acid side chain.
在一些实施方式中,所述支链L为含有酰胺基或六元脂肪族碳环基的C7-C18碳链。In some embodiments, the branched chain L is a C 7 -C 18 carbon chain containing an amide group or a six-membered aliphatic carbocyclic group.
在一些实施方式中,所述支链L选自如下结构中的一种或多种: In some embodiments, the side chain L is selected from one or more of the following structures:
其中,r1是1-12的任意整数,r2为0-20的任意整数,Z为H、烷基或酰胺基,所述烷基如C1-C5烷基。Wherein, r1 is any integer of 1-12, r2 is any integer of 0-20, and Z is H, an alkyl group or an amide group, and the alkyl group is, for example, a C 1 -C 5 alkyl group.
在一些实施方式中,所述接头B的结构与能引入的X的数量有关,所述接头B中含-NH-、C、O、S、酰胺基、磷酰基、硫代磷酰基,当n或m为1时,其为一条直碳链,当n或m为2、3或4时,其分叉的次数分别为2、3或4。In some embodiments, the structure of the linker B is related to the number of Xs that can be introduced. The linker B contains -NH-, C, O, S, amide, phosphoryl, thiophosphoryl, and when n or m is 1, it is a straight carbon chain. When n or m is 2, 3 or 4, the number of forks is 2, 3 or 4, respectively.
在一些实施方式中,所述接头B选自以下结构: In some embodiments, the linker B is selected from the following structures:
其中,A1和A2各自独立地是C、O、S、-NH-、羰基、酰胺基、磷酰基或硫代磷酰基,r为0-4的整数。wherein A1 and A2 are each independently C, O, S, -NH-, carbonyl, amide, phosphoryl or thiophosphoryl, and r is an integer of 0-4.
在一些实施方式中,所述接头B选自以下结构: In some embodiments, the linker B is selected from the following structures:
其中,r为0-4的任意整数。Wherein, r is any integer from 0 to 4.
在一些实施方式中,所述接头B选自以下结构: In some embodiments, the linker B is selected from the following structures:
在一些实施方式中,所述接头B选自以下结构: In some embodiments, the linker B is selected from the following structures:
在一些实施方式中,所述连接链D是含有-NH-、C=O、O、S、酰胺基、磷酰基、硫代磷酰基、芳香烃基、C4-C10脂肪族碳环基、含1-3个氮的五元或六元杂环基或者这些基团的组合的C3-C18碳链。In some embodiments, the connecting chain D is a C 3 -C 18 carbon chain containing -NH-, C=O, O, S, amide, phosphoryl, thiophosphoryl, aromatic hydrocarbon, C 4 -C 10 aliphatic carbocyclic group, five-membered or six-membered heterocyclic group containing 1-3 nitrogen atoms, or a combination of these groups.
在一些实施方式中,所述连接链D还带有羟甲基、甲基叔丁基、甲基苯酚基、C5-C6脂肪环基的侧链。In some embodiments, the connecting chain D further has a side chain of a hydroxymethyl group, a methyl tert-butyl group, a methylphenol group, or a C 5 -C 6 aliphatic ring group.
在一些实施方式中,所述连接链D为含有两个C=O、六元脂肪族碳环基或苯基的C3-C10碳链。In some embodiments, the connecting chain D is a C 3 -C 10 carbon chain containing two C═O groups, a six-membered aliphatic carbocyclic group, or a phenyl group.
在一些实施方式中,所述连接链D为含两个C=O的C3-C10碳链。In some embodiments, the connecting chain D is a C 3 -C 10 carbon chain containing two C═O groups.
在一些实施方式中,所述连接链D选自以下结构: In some embodiments, the connecting chain D is selected from the following structures:
其中,每个p各自独立地为1-20的任意整数;s为2-13的整数;Z1和Z2为相同或者不同的取代基团,如C3-C10烷基。Wherein, each p is independently any integer of 1-20; s is an integer of 2-13; Z1 and Z2 are the same or different substituent groups, such as C3 - C10 alkyl.
在一些实施方式中,所述连接链D选自以下结构: In some embodiments, the connecting chain D is selected from the following structures:
在一些实施方式中,所述连接链D选自以下结构: In some embodiments, the connecting chain D is selected from the following structures:
在一些实施方式中,所述5’MVIP结构中的(X-L)n-B-D-和3’MVIP结构中的(X-L)m-B-D-选自以下结构中的一种或多种: In some embodiments, the (XL) n -BD- in the 5'MVIP structure and the (XL) m -BD- in the 3'MVIP structure are selected from one or more of the following structures:
在一些实施方式中,所述X、L、B及D在5’MVIP与3’MVIP各自的内部或5’MVIP与3’MVIP之间相同或不同。In some embodiments, the X, L, B and D are the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP.
在一些实施方式中,所述5’MVIP结构中的(X-L)n-B-D-选自表3所示的结构:In some embodiments, the (XL) n -BD- in the 5'MVIP structure is selected from the structures shown in Table 3:
表3 5’MVIP的(X-L)n-B-D-结构 Table 3 (XL) n -BD-structure of 5'MVIP
在一些实施方式中,5’MVIP也可以不存在,这时候m可以为2-4的任意整数。In some embodiments, 5'MVIP may not exist, in which case m can be any integer from 2 to 4.
在一些实施方式中,所述3’MVIP结构中的(X-L)m-B-D-选自表4中所示的结构:In some embodiments, the (XL) m -BD- in the 3'MVIP structure is selected from the structures shown in Table 4:
表4 3’MVIP的(X-L)m-B-D-结构 Table 4 (XL) m -BD-structure of 3'MVIP
在一些实施方式中,所述载体结构5’MVIP中的(X-L)n-B-D-与R1的组合如表5所示。In some embodiments, the combination of (XL) n -BD- and R 1 in the carrier structure 5′MVIP is as shown in Table 5.
表5 5’MVIP中(X-L)n-B-D-与R1的组合 Table 5 Combinations of (XL) n -BD- and R 1 in 5'MVIP
在一些实施方式中,3’MVIP可以不存在,这时候n可以是2-4的任意整数。In some embodiments, 3'MVIP may not exist, in which case n may be any integer from 2 to 4.
在一些实施方式中,所述载体结构3’MVIP中的(X-L)m-B-D-与R2组合如表6所示。In some embodiments, the combination of (XL) m -BD- and R 2 in the carrier structure 3'MVIP is as shown in Table 6.
表6 3’MVIP的(X-L)m-B-D-与R2组合 Table 6 Combinations of (XL) m -BD- and R 2 of 3'MVIP
在一些实施方式中,所述5’MVIP选自表5中5’MVIP01至5’MVIP22中的任一个或多个。In some embodiments, the 5’MVIP is selected from any one or more of 5’MVIP01 to 5’MVIP22 in Table 5.
在一些实施方式中,所述3’MVIP选自表6中3’MVIP01至3’MVIP27中的任一个或多个。In some embodiments, the 3’MVIP is selected from any one or more of 3’MVIP01 to 3’MVIP27 in Table 6.
在一些实施方式中,表5中的5’MVIP与表6中的3’MVIP任一个存在组合的可能性,其中n+m=2、3、4、5或6。In some embodiments, there is a possibility of combining a 5'MVIP in Table 5 with any of the 3'MVIPs in Table 6, where n+m=2, 3, 4, 5 or 6.
在一些实施方式中,所述CFB RNA抑制剂中的与载体偶联的正义链、反义链可以为选自下列表7-1中,所述C5 RNA抑制剂中的与载体偶联的正义链、反义链可以为选自下列表7-2中,所述C3 RNA抑制剂中的与载体偶联的正义链、反义链可以为选自下列表7-3中:In some embodiments, the sense strand and antisense strand coupled to the carrier in the CFB RNA inhibitor can be selected from the following Table 7-1, the sense strand and antisense strand coupled to the carrier in the C5 RNA inhibitor can be selected from the following Table 7-2, and the sense strand and antisense strand coupled to the carrier in the C3 RNA inhibitor can be selected from the following Table 7-3:
表7-1 CFB RNA抑制剂中与载体偶联的正义链或反义链 Table 7-1 Sense strand or antisense strand coupled to carrier in CFB RNA inhibitor
表7-2 C5 RNA抑制剂中与载体偶联的正义链或反义链 Table 7-2 Sense strand or antisense strand coupled to carrier in C5 RNA inhibitor
表7-3 C3 RNA抑制剂中与载体偶联的正义链或反义链 Table 7-3 Sense strand or antisense strand coupled to carrier in C3 RNA inhibitor
在一些实施方式中,本申请所述的RNA抑制剂的正义链、反义链为与表7中正义链、反义链具有相同的至少15个连续核苷酸的序列,或为与表7中正义链、反义链相差一个、两个或三个核苷酸的序列。In some embodiments, the sense strand and antisense strand of the RNA inhibitor described in the present application have a sequence of at least 15 consecutive nucleotides that are the same as the sense strand and antisense strand in Table 7, or a sequence that differs from the sense strand and antisense strand in Table 7 by one, two or three nucleotides.
需要强调的是,正义链、反义链的组合方式并非局限于表7的双链组合方式,表7中的其中一条正义链可以与任意一条反义链互补配对;如表7-1中的GsUsCUAGfUCfAfAfCUUAAUUGAsGsA(SEQ ID NO:554)可以与UsfCsUfCAfAUfUAAGUUfGAfCUAGACsAsC(SEQ ID NO:583)、UsfCsUfCAfAUfUAAGUUfGAfCUAGsAsC(SEQ ID NO:584)、UsdCsUCdAATUAAGTUfGACUAGACsAsC(SEQ ID NO:588)、UsfCsUCAfAUfUfAAGUUfGAfCUAGACsAsC(SEQ ID NO:591)、UsfCsUfCAfAUfUAAGUUfGAfCUAGACsAsCTT(SEQ ID NO:593)、UsfCsUCAfAUfUfAAGUUfGAfCUAGACsAsC(SEQ ID NO:594)互补配对,本发明中的任意一条正义链或反义链都是一个独立的个体,组合方式不受限制,至少85%的核苷酸能够互补配对,均可组成双链抑制剂。It should be emphasized that the combination of the sense chain and the antisense chain is not limited to the double-strand combination in Table 7. One of the sense chains in Table 7 can be complementary to any antisense chain; for example, GsUsCUAGfUCfAfAfCUUAAUUGAsGsA (SEQ ID NO: 554) in Table 7-1 can be complementary to UsfCsUfCAfAUfUAAGUUfGAfCUAGACsAsC (SEQ ID NO: 583), UsfCsUfCAfAUfUAAGUUfGAfCUAGsAsC (SEQ ID NO: 584), UsdCsUCdAATUAAGTUfGACUAGA CsAsC (SEQ ID NO: 588), UsfCsUCAfAUfUfAAGUUfGAfCUAGACsAsC (SEQ ID NO: 591), UsfCsUfCAfAUfUAAGUUfGAfCUAGACsAsCTT (SEQ ID NO: 593), and UsfCsUCAfAUfUfAAGUUfGAfCUAGACsAsC (SEQ ID NO: 594) are complementary pairs. Any sense chain or antisense chain in the present invention is an independent individual. The combination method is not limited. At least 85% of the nucleotides can be complementary paired and can form a double-stranded inhibitor.
在一些实施方式中,本发明的任意一条正义链或反义链可以与不同结构的载体连接,作为一种实施例,本发明的任意一条正义链或反义链其5’端和/或3'端与不同结构的5'MVIP和/或3'MVIP连接,偶联的组合方式不受限制。In some embodiments, any sense strand or antisense strand of the present invention can be connected to carriers of different structures. As an example, the 5' end and/or 3' end of any sense strand or antisense strand of the present invention are connected to 5'MVIP and/or 3'MVIP of different structures, and the coupling combination is not limited.
在一些实施方式中,本发明的双链RNA抑制剂可以任选地与一个或多个配体缀合,所述配体只要是能够增强双链RNA抑制剂的活性、细胞分布或细胞摄取(例如,进入细胞)都可以应用于本发明的双链RNA抑制剂。配体可以在3'端、5'端或两端连接到有义链、反义链或两条链上。该载体并不限于本发明列举的MVIP,也可以包括不限于:任意结构的GalNac载体、阳离子脂质载剂、病毒载体、亲脂性部分、两亲性部分、靶向基团、小分子药物、蛋白质、肽、抗体。In some embodiments, the double-stranded RNA inhibitor of the present invention can be optionally conjugated with one or more ligands, and the ligands can be applied to the double-stranded RNA inhibitor of the present invention as long as they can enhance the activity, cellular distribution or cellular uptake (e.g., entering cells) of the double-stranded RNA inhibitor. The ligand can be connected to the sense strand, antisense strand or both strands at the 3' end, 5' end or both ends. The carrier is not limited to the MVIP listed in the present invention, and may also include but is not limited to: GalNac carriers of any structure, cationic lipid carriers, viral vectors, lipophilic parts, amphiphilic parts, targeting groups, small molecule drugs, proteins, peptides, antibodies.
在一些实施方式中,本发明所述的RNA抑制剂的反义链可以是表1-表2中的反义链与5'MVIP和/或3'MVIP偶联得到。In some embodiments, the antisense strand of the RNA inhibitor of the present invention can be obtained by coupling the antisense strands in Tables 1 and 2 with 5'MVIP and/or 3'MVIP.
在一些实施方式中,本发明所述的RNA抑制剂的反义链是与表1-表2中的反义链具有相同的至少15个连续核苷酸的序列,或与表1-表2中反义链相差一个、两个或三个核苷酸的序列与5'MVIP和/或3'MVIP偶联得到的。In some embodiments, the antisense strand of the RNA inhibitor described in the present invention has a sequence of at least 15 consecutive nucleotides identical to the antisense strand in Tables 1-2, or a sequence that differs from the antisense strand in Tables 1-2 by one, two or three nucleotides coupled to 5'MVIP and/or 3'MVIP.
在一些实施方式中,本发明的双链RNA抑制剂可以任选地与一个或多个配体缀合,所述配体只要是能够增强双链RNA抑制剂的活性、细胞分布或细胞摄取(例如,进入细胞)都可以应用于本发明的双链RNA抑制剂。配体可以在3'端、5'端或两端连接到有义链、反义链或两条链上。该载体并不限于本发明列举的MVIP,也可以包括不限于:任意结构的GalNac载体、阳离子脂质载剂、病毒载体、亲脂性部分、两亲性部分、靶向基团、小分子药物、蛋白质、肽、抗体。In some embodiments, the double-stranded RNA inhibitor of the present invention can be optionally conjugated with one or more ligands, and the ligands can be applied to the double-stranded RNA inhibitor of the present invention as long as they can enhance the activity, cellular distribution or cellular uptake (e.g., entering cells) of the double-stranded RNA inhibitor. The ligand can be connected to the sense strand, antisense strand or both strands at the 3' end, 5' end or both ends. The carrier is not limited to the MVIP listed in the present invention, and may also include but is not limited to: GalNac carriers of any structure, cationic lipid carriers, viral vectors, lipophilic parts, amphiphilic parts, targeting groups, small molecule drugs, proteins, peptides, antibodies.
专利CN113171371B中详细考察了5'MVIP和/或3'MVIP结构中X、L、B、D、R1和R2不同对RNA抑制剂活性效果影响,该专利全文引入本发明。Patent CN113171371B examines in detail the effects of different X, L, B, D, R1 and R2 in the 5'MVIP and/or 3'MVIP structures on the activity of RNA inhibitors, and the entire text of the patent is incorporated into the present invention.
当X分别为半乳糖、半乳糖胺、N-乙酰半乳糖胺及其衍生物时,在本发明提供的RNA抑制剂中,优选N-乙酰半乳糖胺及其衍生物作为肝靶向特异性配体,如表8:When X is galactose, galactosamine, N-acetylgalactosamine and its derivatives, among the RNA inhibitors provided by the present invention, N-acetylgalactosamine and its derivatives are preferably used as liver-targeting specific ligands, as shown in Table 8:
表8 Table 8
L的长短对RNA抑制剂的作用效果影响较大,L链不能太短也不能太长;当含有-NH-、C=O、O、S、酰胺基、磷酰基、硫代磷酰基、脂肪族碳环基如环己烷或者这些基团的组合时,或者在同一个5'MVIP、3'MVIP结构中或5'MVIP与3'MVIP彼此L结构不同时,在碳链长为C7-C18这个范围,所得RNA抑制剂的活性相差不大,如表9。The length of L has a great influence on the effect of RNA inhibitors. The L chain should be neither too short nor too long. When containing -NH-, C=O, O, S, amide, phosphoryl, thiophosphoryl, aliphatic carbocyclic group such as cyclohexane or a combination of these groups, or in the same 5'MVIP, 3'MVIP structure or when 5'MVIP and 3'MVIP have different L structures, the activity of the obtained RNA inhibitors is not much different within the range of carbon chain length of C7-C18, as shown in Table 9.
表9 Table 9
除接头B结构改变外,而X、L、D及R1/R2与组合5’MVIP09/3’MVIP09中的一致时,接头B中通式中的A1和A2各自独立地是C、O、S、-NH-、羰基、酰胺基、磷酰基或硫代磷酰基,r为0-4的任意整数,并且接头B在5’MVIP与3’MVIP之间相同或不同时,所得RNA抑制剂活性相差不大。Except for the change in the structure of linker B, when X, L, D and R1 / R2 are consistent with those in the combination 5'MVIP09/3'MVIP09, A1 and A2 in the general formula of linker B are each independently C, O, S, -NH-, carbonyl, amide, phosphoryl or thiophosphoryl, r is any integer from 0 to 4, and when linker B is the same or different between 5'MVIP and 3'MVIP, the resulting RNA inhibitor activity is not much different.
表10 Table 10
在MVIP结构及RNA抑制剂相同的情况下,不同的连接链D会对RNA抑制剂活性有影响,其中D1、D2、D4的效果接近且优于D3,D结构如表11。When the MVIP structure and RNA inhibitor are the same, different connecting chains D will affect the activity of the RNA inhibitor, among which the effects of D1, D2, and D4 are close to and better than D3. The structure of D is shown in Table 11.
表11 Table 11
不同的转接点R1会对RNA抑制剂活性有影响,其中R1-1作为转接点的所得的RNA抑制剂活性最好,R1结构如表12所示。Different transfer points R1 will affect the activity of RNA inhibitors, among which R1-1 as the transfer point has the best RNA inhibitor activity. The structure of R1 is shown in Table 12.
表12 Table 12
不同的转接点R2会对RNA抑制剂活性有影响,其中R2-1作为转接点时RNA抑制剂最佳,R1结构如表13所示。Different transfer points R2 will affect the activity of RNA inhibitors, among which R2-1 is the best RNA inhibitor when used as the transfer point. The R1 structure is shown in Table 13.
表13 Table 13
在一些实施方式中,本发明所述的RNA抑制剂中的n+m分别为2、3、4、5和6。5’MVIP和/或3’MVIP偶联的位置包括反义链的5’端和/或3’端、正义链的5’端和/或3’端、反义链的5’端和正义链的3’端、正义链的5’端和反义链的3’端。In some embodiments, n+m in the RNA inhibitor described in the present invention is 2, 3, 4, 5 and 6 respectively. The positions for coupling of 5'MVIP and/or 3'MVIP include the 5' end and/or 3' end of the antisense chain, the 5' end and/or 3' end of the sense chain, the 5' end of the antisense chain and the 3' end of the sense chain, and the 5' end of the sense chain and the 3' end of the antisense chain.
在一些实施方式中,本发明所述的RNA抑制剂中的n+m分别为2、3、4、5和6。5’MVIP和/或3’MVIP偶联的位置包括表1-表2中反义链的5’端和/或3’端、表1-表2中正义链的5’端和/或3’端、表1-表2中反义链的5’端和正义链的3’端、表1-表2中正义链的5’端和反义链的3’端,所获得的5’MVIP和3’MVIP组合如表14中所示:In some embodiments, n+m in the RNA inhibitor of the present invention is 2, 3, 4, 5 and 6 respectively. The positions of 5'MVIP and/or 3'MVIP coupling include the 5' end and/or 3' end of the antisense strand in Table 1-Table 2, the 5' end and/or 3' end of the sense strand in Table 1-Table 2, the 5' end of the antisense strand and the 3' end of the sense strand in Table 1-Table 2, and the 5' end of the sense strand and the 3' end of the antisense strand in Table 1-Table 2. The obtained 5'MVIP and 3'MVIP combinations are shown in Table 14:
表14 5’MVIP和3’MVIP组合列表 Table 14 5'MVIP and 3'MVIP combination list
在一些实施方式中,n和m各自独立地为0-4的任意整数,各自独立地优选为1-3的整数,且n+m=2-6的整数,优选n+m=2、3或4,更优选为4。In some embodiments, n and m are each independently any integer of 0-4, preferably each independently an integer of 1-3, and n+m=2-6, preferably n+m=2, 3 or 4, more preferably 4.
在一些实施方式中,本申请所述的RNA抑制剂或其药学上可接受的盐优选以钠盐和三乙胺盐或其它可药用盐的形式制备或合成。In some embodiments, the RNA inhibitor described herein or a pharmaceutically acceptable salt thereof is preferably prepared or synthesized in the form of a sodium salt, a triethylamine salt or other pharmaceutically acceptable salts.
在一些实施方式中,本申请所述的RNA抑制剂或其药学上可接受的盐更优选为其钠盐或三乙胺盐。In some embodiments, the RNA inhibitor described herein or a pharmaceutically acceptable salt thereof is more preferably a sodium salt or a triethylamine salt thereof.
另一方面,本申请还提供了一种包含所述RNA抑制剂或其药学上可接受的盐的药物组合物。On the other hand, the present application also provides a pharmaceutical composition comprising the RNA inhibitor or a pharmaceutically acceptable salt thereof.
在一些实施方式中,本发明提供一种包含所述RNA抑制剂或其药学上可接受的盐和任选的药学上可接受的辅料的药物组合物。本发明提供的RNA抑制剂剂或其药学上可接受的盐在制备用于治疗和/或预防补体系统的水平升高相关的疾病的药物中的应用,疾病包括但不限于脂质代谢紊乱。In some embodiments, the present invention provides a pharmaceutical composition comprising the RNA inhibitor or a pharmaceutically acceptable salt thereof and an optional pharmaceutically acceptable excipient. The RNA inhibitor provided by the present invention or a pharmaceutically acceptable salt thereof is used in the preparation of a medicament for treating and/or preventing a disease associated with an elevated level of the complement system, including but not limited to lipid metabolism disorders.
在一些实施方式中,补体系统通过抑制肝脏和脂肪组织中的LPL(肝脂酶)活性,限制脂肪酸的释放,进而调控血浆中的甘油三酯水平。其对胰岛素抵抗、脂肪代谢和整体能量平衡均产生影响。体内和/或体外可能抑制补体系统mRNA表达的因素包括PPARδ、他汀类药物、胰岛素、瘦素、甲状腺激素和脂多糖等5-10;本发明的抑制剂可以与这些药物联用,有进一步提高脂质代谢、糖代谢、心血管疾病等的治疗效果的前景。In some embodiments, the complement system regulates the level of triglycerides in plasma by inhibiting the activity of LPL (hepatic lipase) in the liver and adipose tissue, limiting the release of fatty acids. It affects insulin resistance, fat metabolism and overall energy balance. Factors that may inhibit the expression of complement system mRNA in vivo and/or in vitro include PPARδ, statins, insulin, leptin, thyroid hormones and lipopolysaccharides, etc. 5-10; the inhibitors of the present invention can be used in combination with these drugs, and there is a prospect of further improving the therapeutic effect of lipid metabolism, sugar metabolism, cardiovascular disease, etc.
一个实例方式为配制用于以肠胃外递送全身性施用的组合物,例如,皮下(SC)、肌内(IM)或静脉内(IV)递送。本申请提供的药物组合物可以足以抑制补体系统基因表达的剂量施用。One example approach is to formulate the composition for systemic administration by parenteral delivery, for example, subcutaneous (SC), intramuscular (IM), or intravenous (IV) delivery.The pharmaceutical compositions provided herein can be administered at a dose sufficient to inhibit complement system gene expression.
药学上可接受的“辅料”或“赋形剂”是用于递送一种或多种核酸至动物的药学上可接受的溶剂、悬浮剂或任何其他药学上惰性的媒介物。赋形剂可为液体或固体,并考虑计划的施用方式进行选择,以在与核酸及给定药物组合物中的其他组分组合时提供所需的体积、稠度等。本发明所述的RNA抑制剂可以靶向特定组织(例如,肝细胞)的方式递送。A pharmaceutically acceptable "excipient" or "excipient" is a pharmaceutically acceptable solvent, suspending agent, or any other pharmaceutically inert vehicle for delivering one or more nucleic acids to an animal. Excipients can be liquid or solid and are selected taking into account the planned mode of administration to provide the desired volume, consistency, etc. when combined with the nucleic acid and other components in a given pharmaceutical composition. The RNA inhibitors described herein can be delivered in a manner that targets specific tissues (e.g., hepatocytes).
在一些实施方式中,本发明所述的药物组合物,其还包含递送媒介物(如纳米颗粒、树状聚合物、聚合物、脂质体或阳离子递送系统),In some embodiments, the pharmaceutical composition of the present invention further comprises a delivery vehicle (such as nanoparticles, dendrimers, polymers, liposomes or cationic delivery systems).
在一些实施方式中,本发明所述的递送媒介物包括脂质体。In some embodiments, the delivery vehicle described herein comprises a liposome.
在一些实施方式中,本发明所述的递送媒介物包括纳米脂质,其能够与核酸分子形成脂质体-核酸纳米颗粒。In some embodiments, the delivery vehicle described herein includes nanolipids that can form liposome-nucleic acid nanoparticles with nucleic acid molecules.
在一些实施方式中,本发明所述的递送媒介物包括两性脂质化合物M10C1。In some embodiments, the delivery vehicle described herein comprises the amphiphilic lipid compound M10C1.
本发明提供的药物组合物包括(但不限于)溶液、乳液和包含脂质体的制剂。这些组合物可由多种组分产生,包括(但不限于)预形成液体、自乳化固体和自乳化半固体。所述制剂包括靶向肝脏的那些。可以单位剂型方便地存在的本申请药物制剂可依据制药业公知的常规技术制备。这类技术包括将活性成分与药学上可接受的辅料或赋形剂结合的步骤。The pharmaceutical compositions provided by the present invention include, but are not limited to, solutions, emulsions, and formulations containing liposomes. These compositions can be produced from a variety of components, including, but not limited to, preformed liquids, self-emulsifying solids, and self-emulsifying semisolids. The formulations include those targeted to the liver. The pharmaceutical formulations of the present application, which can be conveniently presented in unit dosage form, can be prepared according to conventional techniques known to the pharmaceutical industry. Such techniques include the step of combining the active ingredient with a pharmaceutically acceptable adjuvant or excipient.
用途use
另一方面,本申请提供一种减少细胞或组织中补体系统mRNA或蛋白质表达的方法,其包括使细胞或组织与有效量的前述的抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,和/或前述的药物组合物接触。On the other hand, the present application provides a method for reducing the expression of complement system mRNA or protein in cells or tissues, which comprises contacting the cells or tissues with an effective amount of the aforementioned RNA inhibitor that inhibits complement system gene expression or a pharmaceutically acceptable salt thereof, and/or the aforementioned pharmaceutical composition.
适合使用本申请方法处理的细胞可为任何表达补体系统基因的细胞,例如,肝脏细胞、脑细胞、胆囊细胞、心脏细胞或肾脏细胞,但优选为肝脏细胞。适合用于本申请方法的细胞可为哺乳动物细胞,当与表达补体系统基因的细胞接触时,RNA抑制剂抑制补体系统基因(例如,人类、灵长类、非灵长类或大鼠补体系统基因)的表达至少约50%,例如可通过PCR或基于分支DNA(bDNA)的方法,或由基于蛋白质的方法,如免疫荧光分析法,蛋白质印迹法或流式细胞分析技术测定的。Cells suitable for treatment using the methods of the present application may be any cells expressing complement system genes, for example, liver cells, brain cells, gallbladder cells, heart cells or kidney cells, but preferably liver cells. Cells suitable for use in the methods of the present application may be mammalian cells, and when contacted with cells expressing complement system genes, the RNA inhibitor inhibits the expression of complement system genes (e.g., human, primate, non-primate or rat complement system genes) by at least about 50%, for example, as determined by PCR or branched DNA (bDNA)-based methods, or by protein-based methods, such as immunofluorescence analysis, Western blotting or flow cytometry.
在一些实施方式中,所述组织是肝脏组织。In some embodiments, the tissue is liver tissue.
在一些实施方式中,所述细胞和组织是离体的。In some embodiments, the cells and tissues are ex vivo.
在一些实施方式中,所述细胞和组织在受试者体内。In some embodiments, the cells and tissues are in a subject.
本发明所用术语“抑制”可与“减少”、“降低”、“沉默”、“下调”、“压制”及其他类似术语交换使用,且包括任何抑制水平。补体系统基因的表达可依据与补体系统基因表达相关的任何变量的水平或水平变化来评价,例如,补体系统mRNA水平。这一水平可在单个细胞中或细胞群中(包括例如,源自受试者的样品)中分析。对照水平可为本领域上采用的任何类型的对照水平,例如,给药前基线水平或从未处理或接受对照(如例如,仅缓冲剂对照或无活性剂对照)处理的类似受试者、细胞或样本测得的水平。As used herein, the term "inhibit" can be used interchangeably with "reduce," "lower," "silence," "downregulate," "suppress," and other similar terms, and includes any level of inhibition. The expression of complement system genes can be evaluated based on the level or level change of any variable related to the expression of complement system genes, for example, the level of complement system mRNA. This level can be analyzed in a single cell or in a cell population (including, for example, a sample derived from a subject). The control level can be any type of control level used in the art, for example, a baseline level before administration or a level measured from a similar subject, cell or sample that has not been treated or treated with a control (such as, for example, a buffer-only control or an inactive agent control).
补体系统基因表达的抑制可通过其中补体系统基因被转录且已处理(例如,通过一个或多个细胞与本申请的RNA抑制剂接触,或通过施用本申请的RNA抑制剂于其中存在该细胞的受试者)使得抑制补体系统基因表达的第一细胞或细胞群(这类细胞可例如存在于源自受试者的样品中)表达的mRNA量与基本上与该第一细胞或细胞群相同但未如此处理的第二细胞或细胞群(未用RNA抑制剂处理或未用靶向目的基因的RNA抑制剂处理的对照细胞)相比的降低来表现。Inhibition of complement system gene expression can be manifested by a decrease in the amount of mRNA expressed by a first cell or cell population (such cells may, for example, be present in a sample derived from a subject) in which complement system genes are transcribed and have been treated (e.g., by contacting one or more cells with an RNA inhibitor of the present application, or by administering an RNA inhibitor of the present application to a subject in which the cells are present) such that expression of the complement system genes is inhibited, as compared to a second cell or cell population that is substantially identical to the first cell or cell population but has not been so treated (control cells that have not been treated with an RNA inhibitor or have not been treated with an RNA inhibitor targeting a gene of interest).
在优选的实施方式中,通过实施使用siRNA合适的浓度在高表达补体系统的细胞系中评价,并将被干预细胞中的mRNA水平表示为非干预对照细胞中mRNA水平的百分比。In a preferred embodiment, the evaluation is performed by using appropriate concentrations of siRNA in cell lines that highly express the complement system, and the mRNA levels in the treated cells are expressed as a percentage of the mRNA levels in non-treated control cells.
在其他实施方式中,补体系统基因表达的抑制可通过功能上与补体系统基因表达相关的参数的降低来评价,例如,受试者血液或血清中的补体系统水平。补体系统基因抑制可在任何表达补体系统的细胞(内源性或来自表达构建体的外源性)中且通过本领域已知的任何分析法测定。In other embodiments, inhibition of complement system gene expression can be assessed by a reduction in a parameter functionally associated with complement system gene expression, e.g., complement system levels in the blood or serum of a subject. Complement system gene inhibition can be measured in any cell expressing the complement system (endogenous or exogenous from an expression construct) and by any assay known in the art.
补体系统表达的抑制可由细胞或细胞群或受试者样品表达的补体系统水平(例如,源自受试者的血液样品中的蛋白质水平)的降低来表现。Inhibition of complement system expression can be manifested by a decrease in the level of complement system expressed by a cell or population of cells or a sample from a subject (eg, protein levels in a blood sample derived from a subject).
可用于评价补体系统基因抑制的对照组细胞、细胞群或受试者样品包括未与本申请RNA抑制剂接触的细胞、细胞群或受试者样品。例如,对照细胞、细胞群或受试者样品可源自于用RNA抑制剂治疗前的单个受试者(例如,人类或动物受试者)或适当匹配的群体对照。Control cells, cell groups or subject samples that can be used to evaluate complement system gene inhibition include cells, cell groups or subject samples that have not been contacted with the RNA inhibitor of the present application. For example, control cells, cell groups or subject samples can be derived from a single subject (e.g., a human or animal subject) or an appropriately matched population control before treatment with an RNA inhibitor.
细胞或细胞群表达的补体系统mRNA水平可采用本领域已知用于评价mRNA表达的任何方法测定。例如,qRT-PCR,评价基因表达的降低。可通过本领域中已知的任何方法,例如,ELISA,评价蛋白质产生的降低。在一些实施方式中,穿刺肝脏活检样品用作监测补体系统基因表达降低的组织材料。其他实施方式中,血液样品用作监测补体系统表达降低的受试者样品。The level of complement system mRNA expressed by a cell or cell population can be determined by any method known in the art for evaluating mRNA expression. For example, qRT-PCR is used to evaluate the reduction of gene expression. The reduction of protein production can be evaluated by any method known in the art, for example, ELISA. In some embodiments, a puncture liver biopsy sample is used as a tissue material for monitoring the reduction of complement system gene expression. In other embodiments, a blood sample is used as a subject sample for monitoring the reduction of complement system expression.
另一方面,本申请提供的前述抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,或前述的药物组合物在制备药物中的用途,所述药物用于预防和/或治疗疾病或病症或者降低疾病或病症的风险。On the other hand, the present application provides the use of the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, or the aforementioned pharmaceutical composition in the preparation of a drug for preventing and/or treating a disease or condition or reducing the risk of a disease or condition.
另一方面,本申请提供一种预防和/或治疗疾病或病症的方法,所述方法包括向有此需要的受试者施用有效量的前述抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,和/或前述的药物组合物。On the other hand, the present application provides a method for preventing and/or treating a disease or condition, comprising administering to a subject in need thereof an effective amount of the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, and/or the aforementioned pharmaceutical composition.
本申请的体内方法可包括对受试者施用包含RNA抑制剂的药物组合物,其中,该RNA抑制剂包括与接受施用RNA抑制剂的哺乳动物的补体系统mRNA的至少一部分互补的核苷酸序列。本发明所述的药物组合物可采用本领域已知的任何方式施用,包括(但不限于):经口、腹膜内或肠胃外途径,包括颅内(例如,脑室内、脑实质内和鞘内)、静脉内、肌内、皮下、透皮、气道(气雾剂)、经鼻、直肠和局部(包括颊内及舌下)施用。在一些实施方式中,所述药物组合物通过静脉内输注或注射施用。在一些实施方式中,所述药物组合物通过皮下注射施用。在一些实施方式中,该组合物通过肌内注射施用。The in vivo method of the present application may include administering to a subject a pharmaceutical composition comprising an RNA inhibitor, wherein the RNA inhibitor comprises a nucleotide sequence complementary to at least a portion of a complement system mRNA of a mammal to which the RNA inhibitor is administered. The pharmaceutical composition of the present invention may be administered in any manner known in the art, including, but not limited to: oral, intraperitoneal or parenteral routes, including intracranial (e.g., intraventricular, intracerebral parenchymal and intrathecal), intravenous, intramuscular, subcutaneous, transdermal, airway (aerosol), nasal, rectal and topical (including buccal and sublingual) administration. In some embodiments, the pharmaceutical composition is administered by intravenous infusion or injection. In some embodiments, the pharmaceutical composition is administered by subcutaneous injection. In some embodiments, the composition is administered by intramuscular injection.
本申请提供的RNA抑制剂还可作为“游离RNA抑制剂”施用。游离RNA抑制剂是在没有药物组合物的存在下施用。裸RNA抑制剂可在合适缓冲液中。所述缓冲液可包含乙酸盐、柠檬酸盐、醇溶谷蛋白、碳酸盐或磷酸盐,或其任何组合。在一个实施方式中,所述缓冲液为磷酸盐缓冲盐水(PBS)。可以调整包含所述RNA抑制剂的缓冲液的pH和渗透压,以便适合施用于受试者。The RNA inhibitors provided herein can also be administered as "free RNA inhibitors". Free RNA inhibitors are administered in the absence of a pharmaceutical composition. Naked RNA inhibitors can be in a suitable buffer. The buffer can contain acetate, citrate, prolamin, carbonate or phosphate, or any combination thereof. In one embodiment, the buffer is phosphate buffered saline (PBS). The pH and osmotic pressure of the buffer containing the RNA inhibitor can be adjusted so as to be suitable for administration to a subject.
或者,本申请提供的RNA抑制剂可作为药物组合物施用,如脂质体制剂。Alternatively, the RNA inhibitors provided herein can be administered as a pharmaceutical composition, such as a liposomal formulation.
本申请提供的药物组合物可以足以抑制补体系统基因表达的剂量施用。通常,本申请所述的RNA抑制剂的合适剂量在每天每千克受试者体重约0.001至约200.0mg的范围内,通常在每天每千克体重约1至50mg的范围内。通常,本申请所述的RNA抑制剂的合适剂量在约0.1mg/kg至约5.0mg/kg的范围内,例如约0.3mg/kg至约3.0mg/kg的范围内。The pharmaceutical composition provided herein can be administered at a dosage sufficient to inhibit complement system gene expression. Typically, the suitable dosage of the RNA inhibitor described herein is in the range of about 0.001 to about 200.0 mg per kilogram of subject body weight per day, typically in the range of about 1 to 50 mg per kilogram of body weight per day. Typically, the suitable dosage of the RNA inhibitor described herein is in the range of about 0.1 mg/kg to about 5.0 mg/kg, for example, in the range of about 0.3 mg/kg to about 3.0 mg/kg.
在一些实施方式中,该方法进一步包括测定来自所述受试者的样品中的补体系统水平。In some embodiments, the method further comprises determining the level of the complement system in a sample from the subject.
例如,该方法进一步包括测定来自所述受试者血液样品、血清样品或尿液样品中的补体系统水平。For example, the method further comprises determining the level of the complement system in a blood sample, a serum sample, or a urine sample from the subject.
又一方面,本申请提供一种细胞,其包含前述的抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐。In yet another aspect, the present application provides a cell comprising the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof.
另一方面,本申请提供一种药盒,其包含前述的抑制补体系统基因表达的RNA抑制剂或其药学上可接受的盐,或者前述的药物组合物。On the other hand, the present application provides a drug kit comprising the aforementioned RNA inhibitor for inhibiting complement system gene expression or a pharmaceutically acceptable salt thereof, or the aforementioned pharmaceutical composition.
不欲被任何理论所限,下文中的实施例仅仅是为了阐释本申请提供的RNA抑制剂、制备方法和用途等,而不用于限制本申请发明的范围。Without intending to be bound by any theory, the following examples are merely intended to illustrate the RNA inhibitors, preparation methods and uses provided by the present application, and are not intended to limit the scope of the present invention.
实施例Example
说明:illustrate:
DMSO的中文名称为二甲基亚砜;The Chinese name of DMSO is dimethyl sulfoxide;
DMF的中文名称为N,N-二甲基甲酰胺;The Chinese name of DMF is N,N-dimethylformamide;
HOBt的中文名称为1-羟基苯并三氮唑;The Chinese name of HOBt is 1-hydroxybenzotriazole;
HBTU的中文名称为O-苯并三氮唑-四甲基脲六氟磷酸酯;The Chinese name of HBTU is O-benzotriazole-tetramethyluronium hexafluorophosphate;
DIPEA(DIEA)的中文名称为N,N-二异丙基乙胺;The Chinese name of DIPEA (DIEA) is N,N-diisopropylethylamine;
DCM的中文名称为二氯甲烷;The Chinese name of DCM is dichloromethane;
DMAP的中文名称为4-二甲氨基吡啶;The Chinese name of DMAP is 4-dimethylaminopyridine;
DMT-CL的中文名称为4,4'-二甲氧基三苯基氯甲烷;The Chinese name of DMT-CL is 4,4'-dimethoxytriphenylmethane;
MEOH的中文名称为甲醇;The Chinese name of MEOH is methanol;
TBTU的中文名称为O-苯并三氮唑-N,N,N',N'-四甲基脲四氟硼酸;The Chinese name of TBTU is O-benzotriazole-N,N,N',N'-tetramethyluronium tetrafluoroborate;
的名称为固相载体,如大孔氨甲基树脂(Resin)。 The name of the solid phase carrier, such as macroporous aminomethyl resin (Resin).
实施例1 RNA抑制剂的合成Example 1 Synthesis of RNA Inhibitors
未偶联载体结构的正义链和反义链是利用标准的固相亚磷酰胺法、使用多通道固相合成仪合成的,然后所述正义链与对应的反义链互补退火制备得到相应的RNA抑制剂。The sense strand and antisense strand of the uncoupled carrier structure are synthesized by a standard solid phase phosphoramidite method using a multi-channel solid phase synthesizer, and then the sense strand is complementary annealed with the corresponding antisense strand to prepare the corresponding RNA inhibitor.
固相亚磷酰胺法基本步骤包括:The basic steps of the solid phase phosphoramidite method include:
1)脱保护:脱掉起始单体中的Solid Support羟基保护基(DMTr);1) Deprotection: remove the Solid Support hydroxyl protecting group (DMTr) in the starting monomer;
2)偶联:加上第一个亚磷酰胺单体,通过3’至5’方向发生偶联反应;2) Coupling: Add the first phosphoramidite monomer and the coupling reaction occurs from 3' to 5' direction;
3)氧化:将所得的核苷亚磷酸酯氧化成更稳定的核苷磷酸酯(即三价磷氧化成五价磷);3) Oxidation: oxidizing the obtained nucleoside phosphite to a more stable nucleoside phosphate (i.e., oxidizing trivalent phosphorus to pentavalent phosphorus);
4)封闭:将前步骤失败核苷酸序列5’-OH加帽封死,使其不再进一步参与反应;重复所述步骤,直至最后一个亚磷酰胺单体的接入;然后用甲胺水溶液和氨水裂解Solid Support与起始单体之间酯键,并将所得核苷酸序列上的各个碱基与磷酸上的保护基脱掉;经HPLC分离纯化后,过滤除菌,冻干得到相应的正义链或反义链。4) Blocking: Cap the 5’-OH of the failed nucleotide sequence in the previous step to prevent it from further participating in the reaction; repeat the above steps until the last phosphoramidite monomer is connected; then use methylamine aqueous solution and ammonia water to cleave the ester bond between Solid Support and the starting monomer, and remove the protecting groups on each base and phosphate on the resulting nucleotide sequence; separate and purify by HPLC, filter and sterilize, and lyophilize to obtain the corresponding sense chain or antisense chain.
RNA抑制剂的合成工艺描述:Description of the synthesis process of RNA inhibitors:
将正义链和反义链冻干粉分别复溶、等摩尔混合,加入注射用水适量,投入适量的TRIS缓冲溶液。轻晃约1~2min,使溶液混合均匀。将水浴锅升温至92℃~95℃。将所述反应液置水浴锅中加热3min~5min,轻晃使溶液受热均匀。自然冷却至室温。得到无色或微黄色透明液体,取样送检,测浓度。Dissolve the sense strand and antisense strand freeze-dried powders separately, mix them in equal moles, add an appropriate amount of water for injection, and add an appropriate amount of TRIS buffer solution. Shake gently for about 1 to 2 minutes to mix the solution evenly. Heat the water bath to 92°C to 95°C. Heat the reaction solution in a water bath for 3 to 5 minutes, and shake gently to heat the solution evenly. Cool naturally to room temperature. Obtain a colorless or slightly yellow transparent liquid, take a sample for inspection, and measure the concentration.
实施例2-1 CFB、C5 RNA抑制剂体外抑制补体系统基因表达试验Example 2-1 In vitro study on the inhibition of complement system gene expression by CFB and C5 RNA inhibitors
本实施例的RNA抑制剂选自表1-1、表1-2,由实施例1所述方法制备得到。The RNA inhibitors of this example are selected from Table 1-1 and Table 1-2, and are prepared by the method described in Example 1.
Hep3B、huh7细胞用胰蛋白酶消化并调整到合适的密度,然后接种到96孔板中,活细胞浓度为0.2×106个/mL。在接种的同时,使用Lipofectamine RNAiMax(Invitrogen-13778150)用测试siRNA或对照siRNA转染细胞。siRNA以siRNA以如下浓度:0.1nM、0.02nM、0.015nM、0.001nM,10nM、1nM、0.01nM,一式三份进行测试,同时设置仅含细胞和RNAiMax的无siRNA对照组及阳性对照组。Hep3B and huh7 cells were digested with trypsin and adjusted to the appropriate density, then seeded into 96-well plates at a viable cell concentration of 0.2×10 6 cells/mL. At the same time as seeding, cells were transfected with test siRNA or control siRNA using Lipofectamine RNAiMax (Invitrogen-13778150). siRNA was tested in triplicate at the following concentrations: 0.1nM, 0.02nM, 0.015nM, 0.001nM, 10nM, 1nM, 0.01nM, and a no siRNA control group and a positive control group containing only cells and RNAiMax were set up.
转染后24小时,去除培养基并收获细胞用于RNA提取。利用96通道全自动核酸提取纯化仪或Promega总RNA提取试剂盒提取总RNA。24 hours after transfection, the culture medium was removed and the cells were harvested for RNA extraction. Total RNA was extracted using a 96-channel fully automatic nucleic acid extraction and purification instrument or a Promega total RNA extraction kit.
根据手册,使用II All-in-One First-Strand cDNA Synthesis SuperMix for qPCR(One-Step gDNA Removal)试剂盒,进行cDNA合成。通过qPCR检测目的cDNA,平行检测GAPDH cDNA作为内部对照。荧光定量PCR仪(Thermo QuantStudio 1)如下步骤进行:在95℃下进行30秒,然后以在95℃下10秒、在60℃下30秒的循环进行40个循环。According to the manual, use cDNA synthesis was performed using the II All-in-One First-Strand cDNA Synthesis SuperMix for qPCR (One-Step gDNA Removal) Kit. The target cDNA was detected by qPCR, and GAPDH cDNA was detected in parallel as an internal control. Fluorescence quantitative PCR was performed using a Thermo QuantStudio 1 instrument as follows: 30 seconds at 95°C, followed by 40 cycles of 10 seconds at 95°C and 30 seconds at 60°C.
数据分析:Data Analysis:
依据各样品的Ct值计算样品中目的基因mRNA表达水平,使用ΔΔCt相对定量法进行计算,靶基因相对表达量使用2-ΔΔCt表示。The mRNA expression level of the target gene in the sample was calculated based on the Ct value of each sample using the ΔΔCt relative quantification method, and the relative expression of the target gene was expressed as 2 - ΔΔCt .
方程式列出如下:The equation is listed below:
ΔCT=靶基因平均Ct-GAPDH平均CtΔCT = target gene average Ct - GAPDH average Ct
ΔΔCT=ΔCT(样品)-ΔCT(随机对照或Lipofectamine RNAiMax对照);ΔΔCT = ΔCT (sample) - ΔCT (random control or Lipofectamine RNAiMax control);
靶基因mRNA的相对定量=2(-ΔΔCT) Relative quantification of target gene mRNA = 2 (-ΔΔCT)
抑制%=(对照的相对定量-样品的相对定量)/对照的相对定量×100%。Inhibition % = (relative quantification of control - relative quantification of sample) / relative quantification of control x 100%.
CFB RNA抑制剂在Hep3B细胞转染试验结果见下表15-1到15-4。The results of the CFB RNA inhibitor transfection experiment in Hep3B cells are shown in Tables 15-1 to 15-4 below.
C5 RNA抑制剂在Hep3B细胞转染试验结果见下表15-5到15-11。The results of the Hep3B cell transfection experiment with C5 RNA inhibitor are shown in Tables 15-5 to 15-11 below.
表15-1 0.1nM CFB RNA抑制剂在Hep3B细胞的抑制效果 Table 15-1 Inhibitory effect of 0.1nM CFB RNA inhibitor on Hep3B cells
表15-2 0.02nM CFB RNA抑制剂在Hep3B细胞的抑制效果 Table 15-2 Inhibitory effect of 0.02nM CFB RNA inhibitor on Hep3B cells
表15-3 0.015nM CFB RNA抑制剂在Hep3B细胞的抑制效果 Table 15-3 Inhibitory effect of 0.015nM CFB RNA inhibitor on Hep3B cells
表15-4 0.1CFB RNA抑制剂在Hep3B细胞的抑制效果 Table 15-4 Inhibitory effect of 0.1CFB RNA inhibitor on Hep3B cells
表15-5 1nM C5 RNA抑制剂在Huh7细胞的抑制效果 Table 15-5 Inhibitory effect of 1nM C5 RNA inhibitor on Huh7 cells
表15-6 1、0.1nM C5RNA抑制剂在huh7细胞的抑制效果 Table 15-6 1. Inhibitory effect of 0.1 nM C5RNA inhibitor on huh7 cells
表15-7 0.01nM C5 RNA抑制剂在Hep3B细胞的抑制效果 Table 15-7 Inhibitory effect of 0.01nM C5 RNA inhibitor on Hep3B cells
表15-8 0.01nM C5 RNA抑制剂在Hep3B细胞的抑制效果 Table 15-8 Inhibitory effect of 0.01nM C5 RNA inhibitor on Hep3B cells
实施例2-2 RNA抑制剂体外抑制C3基因表达试验Example 2-2 In vitro RNA inhibitor inhibition of C3 gene expression test
本实施例的RNA抑制剂如表1-3所示。应用Fugene HD将质粒DNA(C3_PSICHECK(TM)-2质粒)转入Hep3B、Huh7细胞。将转染后的细胞以每孔10,000个细胞的密度接种到96孔板中,每孔培养液为100μL。细胞置于5% CO2、37℃孵箱中培养过夜。然后将RNA抑制剂用PBS配制相应浓度的纳米脂质包裹的RNA抑制剂样品溶液。向对应位置每孔加入RNAiMAX/Opti-MEM,并取相应浓度稀释好的RNA抑制剂样品溶液加入孔中,混匀并孵育,取孵育后的混合液与含10% FBS的DMEM混合均匀。吸去每孔中的培养基,然后加入新的含样品的培养基,加好后置于5% CO2、37℃培养箱中培养,样品测试终浓度为0.01nM。The RNA inhibitors of this example are shown in Tables 1-3. Plasmid DNA (C3_PSICHECK(TM)-2 plasmid) was transferred into Hep3B and Huh7 cells using Fugene HD. The transfected cells were inoculated into a 96-well plate at a density of 10,000 cells per well, and the culture medium in each well was 100 μL. The cells were placed in a 5% CO 2 , 37°C incubator and cultured overnight. Then the RNA inhibitor was prepared with PBS to prepare the RNA inhibitor sample solution of nanolipids of the corresponding concentration. RNAiMAX/Opti-MEM was added to each well at the corresponding position, and the RNA inhibitor sample solution diluted with the corresponding concentration was added to the well, mixed and incubated, and the incubated mixture was mixed evenly with DMEM containing 10% FBS. The culture medium in each well was aspirated, and then a new culture medium containing the sample was added. After adding, it was placed in a 5% CO 2 , 37°C incubator for culture, and the final concentration of the sample test was 0.01nM.
将细胞从培养箱中取出,吸弃上清,加入新鲜培养基和检测试剂,避光震荡,待细胞充分裂解后,将样品转移至不透光的白板中检测萤火虫的发光信号;向各孔中加入&检测试剂,避光震荡,检测海肾萤光素酶信号。计算各孔主报告基因与内参报告基因信号的比值。所得试验结果见下表15-9。Take the cells out of the incubator, discard the supernatant, add fresh culture medium and detection reagent, shake in the dark, and after the cells are fully lysed, transfer the samples to a light-proof white plate to detect the luminescent signal of fireflies; add & Detection reagent, shake in the dark, detect Renilla luciferase signal. Calculate the ratio of the main reporter gene to the internal reference reporter gene signal in each well. The obtained test results are shown in Table 15-9 below.
表15-9 0.01nM RNA抑制剂对Hep3B细胞中C3 mRNA的抑制效果 Table 15-9 Inhibitory effect of 0.01 nM RNA inhibitor on C3 mRNA in Hep3B cells
根据一级序列的筛选结果,挑选部分进行修饰、加载体进一步删选抑制剂。Based on the screening results of the primary sequence, parts are selected for modification and carriers are added to further screen inhibitors.
实施例3载体结构的合成Example 3 Synthesis of carrier structure
当本申请的RNA抑制剂的正义链或反义链的3’端偶联有载体结构3'MVIP时,3'MVIP的solid support作为固相合成的起始单体。当本申请的RNA抑制剂的正义链或反义链的5’端偶联有载体结构5'MVIP时,5’MVIP亚磷酰胺单体作为固相合成的最后一个单体。When the 3' end of the sense strand or antisense strand of the RNA inhibitor of the present application is coupled with the carrier structure 3'MVIP, the solid support of 3'MVIP is used as the starting monomer of solid phase synthesis. When the 5' end of the sense strand or antisense strand of the RNA inhibitor of the present application is coupled with the carrier structure 5'MVIP, the 5'MVIP phosphoramidite monomer is used as the last monomer of solid phase synthesis.
3’MVIP的solid spport通式如下: The solid spport formula of 3'MVIP is as follows:
m为1-4时,通式中接头B部分分别支化1至4次,以获得对应的3’MVIP的Solid Support。When m is 1-4, the connector B part in the general formula is branched 1 to 4 times to obtain the corresponding Solid Support of 3’MVIP.
5’MVIP亚磷酰胺单体通式如下: The general formula of 5'MVIP phosphoramidite monomer is as follows:
n为1-4时,通式中接头B部分分别支化1至4次,以获得对应的5”MVIP亚磷酰胺单体。When n is 1-4, the linker B in the general formula is branched 1 to 4 times to obtain the corresponding 5"MVIP phosphoramidite monomer.
以下仅示例性列举出几种3’MVIP Solid Support和5’MVIP亚磷酰胺单体化学合成过程。参照实施例所述的方法,本领域技术人员可以容易的合成本发明所涉及的其余的3’MVIP Solid Support和5’MVIP亚磷酰胺单体。合成工艺过程描述如下:The following are only exemplary examples of several chemical synthesis processes of 3'MVIP Solid Support and 5'MVIP phosphoramidite monomers. With reference to the methods described in the examples, those skilled in the art can easily synthesize the remaining 3'MVIP Solid Support and 5'MVIP phosphoramidite monomers involved in the present invention. The synthesis process is described as follows:
3.1 3’MVIP的Solid Support的合成3.1 Synthesis of Solid Support for 3’MVIP
3.1.1 3'MVIP09的Solid Support的合成 3.1.1 Synthesis of Solid Support of 3'MVIP09
3'MVIP09的Solid Support3'MVIP09's Solid Support
合成过程描述:Description of the synthesis process:
3.1.1.1 ERC-01-c1的合成 3.1.1.1 Synthesis of ERC-01-c1
称取2-氨基-1,3-丙二醇(5.0g,54.9mmol),加入DMSO 50mL、氢氧化钠溶液(1g/mL)5mL,降温到0℃,滴加丙烯酸叔丁酯(20mL,137.8mol),2小时滴加完,室温反应48h,加石油醚(100mL),饱和食盐水洗2次,有机层干燥。过层析柱(洗脱液:乙酸乙酯:石油醚=25%-75%),上柱加0.05%的三乙胺,得无色油状物6.2g。Weigh 2-amino-1,3-propanediol (5.0 g, 54.9 mmol), add DMSO 50 mL, sodium hydroxide solution (1 g/mL) 5 mL, cool to 0 ° C, add tert-butyl acrylate (20 mL, 137.8 mol) dropwise, add for 2 hours, react at room temperature for 48 hours, add petroleum ether (100 mL), wash twice with saturated brine, and dry the organic layer. Pass through a chromatography column (eluent: ethyl acetate: petroleum ether = 25%-75%), add 0.05% triethylamine to the column, and obtain 6.2 g of colorless oil.
3.1.1.2 ERC-01-c2的合成 3.1.1.2 Synthesis of ERC-01-c2
称取ERC-01-c1(6.2g,17.9mmol),加二氯甲烷50mL、碳酸钠溶液(25%)23mL,室温滴加氯甲酸苄酯(8.2mL,57.4mmol),2小时滴加完,室温反应过夜,饱和食盐水洗涤3次,无水硫酸钠干燥,蒸干溶剂,过层析柱(乙酸乙酯:石油醚=5%-30%)得油状物4.0g。Weigh ERC-01-c1 (6.2 g, 17.9 mmol), add 50 mL of dichloromethane and 23 mL of sodium carbonate solution (25%), add benzyl chloroformate (8.2 mL, 57.4 mmol) dropwise at room temperature for 2 hours, react at room temperature overnight, wash 3 times with saturated brine, dry over anhydrous sodium sulfate, evaporate the solvent, and pass through a chromatography column (ethyl acetate: petroleum ether = 5%-30%) to obtain 4.0 g of an oily substance.
3.1.1.3 ERC-01-c3的合成 3.1.1.3 Synthesis of ERC-01-c3
取ERC-01-c2(4.0g,8.3mmol),加甲酸12mL,室温反应过夜,减压蒸干溶剂,得产品2.8g。Take ERC-01-c2 (4.0 g, 8.3 mmol), add 12 mL of formic acid, react at room temperature overnight, evaporate the solvent under reduced pressure to obtain 2.8 g of the product.
3.1.1.4 ERCd-01-c1的合成 3.1.1.4 Synthesis of ERCd-01-c1
将化合物ERC-01-c3(1.11g,3.0mmol)和dlSANC-c4(3.6g,8.04mmol)加到DMF(60mL)中,然后加入HOBt(2.24g)和HBTU(3.36g),然后缓慢加入DIEA(4.16mL)。反应液室温下搅拌反应3小时。然后加入水,水层用二氯甲烷萃取(2x10mL)。合并有机层,然后依次用饱和碳酸氢钠(80mL)、水(2x60 mL)、饱和食盐水(60mL)洗。用无水硫酸钠干燥,减压蒸干,用硅胶柱层析纯化(洗脱液:3-15%MeOH in DCM)。得淡黄色固3.24g。Compound ERC-01-c3 (1.11 g, 3.0 mmol) and dlSANC-c4 (3.6 g, 8.04 mmol) were added to DMF (60 mL), followed by HOBt (2.24 g) and HBTU (3.36 g), and then DIEA (4.16 mL) was slowly added. The reaction solution was stirred at room temperature for 3 hours. Water was then added, and the aqueous layer was extracted with dichloromethane (2x10 mL). The organic layers were combined and then washed with saturated sodium bicarbonate (80 mL), water (2x60 mL), and saturated brine (60 mL) in sequence. Dry with anhydrous sodium sulfate, evaporate to dryness under reduced pressure, and purify with silica gel column chromatography (eluent: 3-15% MeOH in DCM). 3.24 g of light yellow solid was obtained.
3.1.1.5 ERCd-01-c2的合成 3.1.1.5 Synthesis of ERCd-01-c2
ERCd-01-c1(3.24g,2.6mmol)用甲醇(60mL)溶解,加入10%钯碳(0.3g)、乙酸(2.0mL)。然后常压下加氢,反应过夜。反应液用硅藻土过滤,滤液减压蒸干,得油状物ERCd-01-c2 2.9g,其高分辨质谱图见图1。ERCd-01-c1 (3.24 g, 2.6 mmol) was dissolved in methanol (60 mL), and 10% palladium carbon (0.3 g) and acetic acid (2.0 mL) were added. Then hydrogenation was added under normal pressure and the reaction was allowed to proceed overnight. The reaction solution was filtered through diatomaceous earth, and the filtrate was evaporated to dryness under reduced pressure to obtain 2.9 g of an oily substance ERCd-01-c2, the high-resolution mass spectrum of which is shown in Figure 1.
3.1.1.6 3’MVIP09-c1的合成 3.1.1.6 Synthesis of 3'MVIP09-c1
向反应瓶内依次加入SANCd-01-c0(0.824g,1.5mmol)和ERCd-01-c2(1.09g,1.0mmol),再加入10mL的DCM,搅拌溶解,再依次加入TBTU(0.963g)和DIPEA(0.517g),反应过夜,加水,用DCM萃取,有机相再用饱和食盐水洗涤,干燥、过滤、浓缩,最后过硅胶柱进行纯化,得产品1.3g。SANCd-01-c0 (0.824 g, 1.5 mmol) and ERCd-01-c2 (1.09 g, 1.0 mmol) were added to the reaction bottle in sequence, and then 10 mL of DCM was added, stirred to dissolve, and TBTU (0.963 g) and DIPEA (0.517 g) were added in sequence. The reaction was allowed to proceed overnight, water was added, and the mixture was extracted with DCM. The organic phase was then washed with saturated brine, dried, filtered, and concentrated, and finally purified by silica gel column to obtain 1.3 g of the product.
3.1.1.7 3’MVIP09-c2的合成 3.1.1.7 Synthesis of 3'MVIP09-c2
向反应瓶内依次加入3’MVIP09-c1(1.62g,1μmol)和10mL的DCM,室温搅拌溶解,再依次加入DMAP(0.366g)和丁二酸酐(0.2g,3μmol),室温搅拌反应,TLC分析,反应合格浓缩掉DCM,加水,用DCM萃取,有机相再用饱和食盐水洗涤,有机相经无水硫酸钠干燥、过滤、浓缩,最后过硅胶柱进行纯化,得到产品为1.55g。To the reaction bottle, 3'MVIP09-c1 (1.62 g, 1 μmol) and 10 mL of DCM were added in sequence, and the mixture was dissolved by stirring at room temperature. DMAP (0.366 g) and succinic anhydride (0.2 g, 3 μmol) were added in sequence, and the mixture was reacted by stirring at room temperature. After TLC analysis, if the reaction was qualified, DCM was concentrated, water was added, and the mixture was extracted with DCM. The organic phase was washed with saturated brine, dried over anhydrous sodium sulfate, filtered, and concentrated, and finally purified by silica gel column to obtain 1.55 g of the product.
3.1.1.8 3’MVIP09的Solid Support合成 3.1.1.8 Solid Support Synthesis of 3'MVIP09
向反应瓶内依次加入3’MVIP09-c2(0.86g,0.5μmol)和10mL DMF,溶解,再依次加入HBTU(0.19g)、DIPEA(0.194g)和大孔氨甲基树脂(2.0g),摇床24h,过滤,树脂用10%甲醇/DCM洗涤,再用25%醋酸/吡啶进行封端,取代度150μmol/g。To the reaction bottle, 3’MVIP09-c2 (0.86 g, 0.5 μmol) and 10 mL DMF were added in sequence to dissolve, and then HBTU (0.19 g), DIPEA (0.194 g) and macroporous aminomethyl resin (2.0 g) were added in sequence. The mixture was shaken for 24 h and filtered. The resin was washed with 10% methanol/DCM and capped with 25% acetic acid/pyridine. The degree of substitution was 150 μmol/g.
3.1.2 3'MVIP17的Solid Support的合成 3.1.2 Synthesis of Solid Support for 3'MVIP17
3'MVIP17 Solid Support3'MVIP17 Solid Support
3.1.2.1 SANC-01-c1的合成 3.1.2.1 Synthesis of SANC-01-c1
合成步骤参照3.1.1.1.ERC-01-c1的合成。The synthesis steps refer to 3.1.1.1. Synthesis of ERC-01-c1.
3.1.2.2 SANC-01-c2的合成 3.1.2.2 Synthesis of SANC-01-c2
合成步骤参照3.1.1.2.ERC-01-c2的合成。The synthesis steps refer to 3.1.1.2. Synthesis of ERC-01-c2.
3.1.2.3 SANC-01-c3的合成 3.1.2.3 Synthesis of SANC-01-c3
合成步骤参照3.1.1.3.ERC-01-c3的合成。The synthesis steps refer to 3.1.1.3. Synthesis of ERC-01-c3.
3.1.2.4 SANCd-01-c1的合成 3.1.2.4 Synthesis of SANCd-01-c1
合成步骤参照3.1.1.4.ERCd-01-c1的合成。The synthesis steps refer to 3.1.1.4. Synthesis of ERCd-01-c1.
3.1.2.5 SANCd-01-c2的合成 3.1.2.5 Synthesis of SANCd-01-c2
合成步骤参照3.1.1.5.ERCd-01-c2的合成。The synthesis steps refer to 3.1.1.5. Synthesis of ERCd-01-c2.
3.1.2.6 3’MVIP17-c1的合成 3.1.2.6 Synthesis of 3'MVIP17-c1
合成步骤参照3.1.1.6.3’MVIP09-c1的合成,合成所得3’MVIP17-c1的高分辨质谱图见图2。The synthesis steps refer to the synthesis of 3’MVIP09-c1 in 3.1.1.6., and the high-resolution mass spectrum of the synthesized 3’MVIP17-c1 is shown in Figure 2.
3.1.2.7 3’MVIP17-c2的合成 3.1.2.7 Synthesis of 3'MVIP17-c2
合成步骤参照3.1.1.7 3’MVIP09-c2的合成。The synthesis steps refer to 3.1.1.7 Synthesis of 3’MVIP09-c2.
3.1.2.8 3’MVIP17的Solid Support合成 3.1.2.8 Solid Support Synthesis of 3'MVIP17
合成步骤参照3.1.1.8 3’MVIP09的Solid Support合成。The synthesis steps refer to 3.1.1.8 Solid Support synthesis of 3’MVIP09.
3.1.3 3'MVIP01的Solid Support的合成: 3.1.3 Synthesis of Solid Support of 3'MVIP01:
3'MVIP01 Solid Support3'MVIP01 Solid Support
合成过程描述:Description of the synthesis process:
3.1.3.1 3’MVIP01-c1的合成 3.1.3.1 Synthesis of 3'MVIP01-c1
合成步骤参照3.1.1.6.3’MVIP09-c1的合成。The synthesis steps refer to the synthesis of 3.1.1.6.3’MVIP09-c1.
3.1.3.2 3’MVIP01-c2的合成 3.1.3.2 Synthesis of 3'MVIP01-c2
合成步骤参照3.1.1.7.3’MVIP09-c2的合成。The synthesis steps refer to the synthesis of 3.1.1.7.3’MVIP09-c2.
3.1.3.3 3’MVIP01的Solid Support合成 3.1.3.3 Solid Support Synthesis of 3'MVIP01
合成步骤参照3.1.1.8.3’MVIP09的Solid Support合成。The synthesis steps refer to 3.1.1.8.3’MVIP09’s Solid Support synthesis.
3.2 5’MVIP亚磷酰胺单体的合成3.2 Synthesis of 5’MVIP phosphoramidite monomer
3.2.1 5’MVIP09亚磷酰胺单体的合成: 3.2.1 Synthesis of 5'MVIP09 phosphoramidite monomer:
5'MVIP09亚磷酰胺单体5'MVIP09 phosphoramidite monomer
3.2.1.1 5’MVIP09-ERCd-PFP-c1的合成 3.2.1.1 Synthesis of 5'MVIP09-ERCd-PFP-c1
称量ERCd-01-c2(2.18g,2.0mmol)溶于DMF(50mL),加戊二酸单苄酯(0.53g,2.4mmol)、DIPEA(0.78g)与TBTU(0.84g),室温搅拌过夜,加水淬灭(50mL),DCM(30mL*3)萃取,10%柠檬酸(50mL*3)、饱和碳酸氢钠50mL和吡啶100mL洗涤,无水硫酸钠干燥,过滤,旋蒸,过柱纯化得产品5’MVIP09-ERCd-PFP-c1(2.15g)。Weigh ERCd-01-c2 (2.18 g, 2.0 mmol) and dissolve it in DMF (50 mL). Add benzyl glutarate (0.53 g, 2.4 mmol), DIPEA (0.78 g) and TBTU (0.84 g). Stir at room temperature overnight, quench with water (50 mL), extract with DCM (30 mL*3), wash with 10% citric acid (50 mL*3), saturated sodium bicarbonate 50 mL and pyridine 100 mL, dry over anhydrous sodium sulfate, filter, rotary evaporate, and purify by column to obtain the product 5'MVIP09-ERCd-PFP-c1 (2.15 g).
3.2.1.2 5’MVIP09-ERCd-PFP-c2的合成 3.2.1.2 Synthesis of 5'MVIP09-ERCd-PFP-c2
称量5’MVIP09-ERCd-PFP-c1(2.15g,1.66mmol)和10%钯碳(0.21g),加甲醇(50mL),室温搅拌加氢过夜,反应结束后硅藻土过滤钯碳,旋蒸得5’MVIP09-ERCd-PFP-c2粗品(1.9g),其高分辨率质谱图如图3所示。Weigh 5'MVIP09-ERCd-PFP-c1 (2.15 g, 1.66 mmol) and 10% palladium carbon (0.21 g), add methanol (50 mL), stir and hydrogenate at room temperature overnight. After the reaction, filter the palladium carbon with diatomaceous earth and rotary evaporate to obtain the crude product of 5'MVIP09-ERCd-PFP-c2 (1.9 g). Its high-resolution mass spectrum is shown in Figure 3.
3.2.1.3 5’MVIP09-ERCd-PFP的合成 3.2.1.3 Synthesis of 5'MVIP09-ERCd-PFP
称量5’MVIP09-ERCd-PFP-c2粗品(1.9g,1.58mmol)溶于DCM(60mL),加DIPEA(1.33g),冷却,加三氟乙酸五氟苯酚酯(2.21g,7.9mmol),室温搅拌反应2h后旋蒸,再溶于DCM(60mL),饱和碳酸氢钠(30mL*3)、10%柠檬酸(30mL*1)、饱和食盐水(50mL*1)洗涤,无水硫酸钠干燥,过滤,旋蒸得5’MVIP09-ERCd-PFP粗品(2.35g),抽干后无纯化直接用于下一步反应。Weigh the crude product of 5'MVIP09-ERCd-PFP-c2 (1.9 g, 1.58 mmol) and dissolve it in DCM (60 mL). Add DIPEA (1.33 g), cool, add pentafluorophenol trifluoroacetate (2.21 g, 7.9 mmol), stir at room temperature for 2 h, then evaporate it by rotary evaporation, dissolve it in DCM (60 mL), wash it with saturated sodium bicarbonate (30 mL*3), 10% citric acid (30 mL*1), and saturated brine (50 mL*1), dry it with anhydrous sodium sulfate, filter it, and evaporate it by rotary evaporation to obtain the crude product of 5'MVIP09-ERCd-PFP (2.35 g). After drying, use it directly in the next reaction without purification.
3.2.1.4 5’MVIP09亚磷酰胺单体-c1的合成 3.2.1.4 Synthesis of 5'MVIP09 phosphoramidite monomer-c1
5’MVIP09-ERCd-PFP粗品(2.35g,1.58mmol)溶于DCM(60mL),加DIPEA(0.82g,6.32mmol)、6-氨基-1-己醇(0.37g,3.16mmol),室温搅拌反应过夜。加10%柠檬酸(30mL),DCM(30mL*3)萃取,饱和食盐水(50mL)洗涤,无水硫酸钠干燥,过滤、旋蒸,过柱纯化得产品5’MVIP09单体-c1(1.73g)。The crude product of 5'MVIP09-ERCd-PFP (2.35 g, 1.58 mmol) was dissolved in DCM (60 mL), and DIPEA (0.82 g, 6.32 mmol) and 6-amino-1-hexanol (0.37 g, 3.16 mmol) were added, and the mixture was stirred at room temperature overnight. 10% citric acid (30 mL) was added, and the mixture was extracted with DCM (30 mL*3), washed with saturated brine (50 mL), dried over anhydrous sodium sulfate, filtered, evaporated, and purified by column to obtain the product 5'MVIP09 monomer-c1 (1.73 g).
3.2.1.5 5’MVIP09亚磷酰胺单体 3.2.1.5 5'MVIP09 phosphoramidite monomer
称量5’MVIP09亚磷酰胺单体-c1(1.3g、1.0mmol)溶于乙腈(30mL),加入二异丙胺三氮唑(0.22g),冰浴下滴加双-(二异丙基氨基)(2-氰基乙氧基)膦(0.36g,1.2mmol),室温反应4h,HPLC中控,反应合格后,浓缩过柱纯化得到产品5’MVIP09单体(1.2g)。Weigh 5'MVIP09 phosphoramidite monomer-c1 (1.3 g, 1.0 mmol) and dissolve it in acetonitrile (30 mL), add diisopropylamine triazole (0.22 g), add bis-(diisopropylamino)(2-cyanoethoxy)phosphine (0.36 g, 1.2 mmol) dropwise under ice bath, react at room temperature for 4 hours, control by HPLC, after the reaction is qualified, concentrate and purify by column to obtain the product 5'MVIP09 monomer (1.2 g).
3.2.2 5'MVIP01亚磷酰胺单体的合成: 3.2.2 Synthesis of 5'MVIP01 phosphoramidite monomer:
5'MVIP01亚磷酰胺单体5'MVIP01 phosphoramidite monomer
5'MVIP01的亚磷酰胺单体称量YICd-01-c2(1.12g,2.0mmol),剩余操作参照3.2.1.1.~3.2.1.5。Phosphoramidite monomer of 5'MVIP01 Weigh YICd-01-c2 (1.12 g, 2.0 mmol), and refer to 3.2.1.1. to 3.2.1.5 for the remaining operations.
实施例4带载体偶联的RNA抑制剂的合成Example 4 Synthesis of RNA Inhibitors Coupled with Carriers
偶联载体的反义链(3’MVIP 09偶联)合成描述:用氩气吹扫试剂瓶至少2min。向试剂瓶中依次加入亚磷酰胺单体或和乙腈,拧紧瓶盖后,震荡直至目测固体全溶。然后加入3A分子筛,静置8h以上待用。用氩气吹扫试剂瓶至少2min。向试剂瓶中依次加入氢化黄原素和干燥的吡啶,拧紧瓶盖后,震荡直至目测固体全溶,暂存待用。确认在室温20~30℃环境条件下进行以下操作:称取3’MVIP Solid Support,加入到试剂瓶中,再加入乙腈,震荡混合均匀,转移至合成柱内,并用乙腈将试剂瓶中残余的部分淋洗转移至合成柱内。淋洗完毕后加乙腈充满合成柱,记录使用乙腈的用量。按仪器操作安装固定合成柱。Synthesis description of the antisense strand of the coupling carrier (3’MVIP 09 coupling): Purge the reagent bottle with argon for at least 2 minutes. Add phosphoramidite monomer or and acetonitrile to the reagent bottle in sequence, tighten the bottle cap, and shake until the solid is visually dissolved. Then add 3A molecular sieves and let it stand for more than 8 hours for use. Purge the reagent bottle with argon for at least 2 minutes. Add hydrogenated xanthan and dry pyridine to the reagent bottle in sequence, tighten the bottle cap, and shake until the solid is visually dissolved, and store it for use. Confirm that the following operations are performed at room temperature 20-30℃: Weigh 3’MVIP Solid Support, add it to the reagent bottle, then add acetonitrile, shake and mix evenly, transfer it to the synthesis column, and use acetonitrile to elute the remaining part in the reagent bottle and transfer it to the synthesis column. After the elution is completed, add acetonitrile to fill the synthesis column and record the amount of acetonitrile used. Install and fix the synthesis column according to the instrument operation.
将所述配制的单体溶液、CAP A、CAP B、氧化剂、硫代试剂、活化剂、脱帽剂以及乙腈,连接至AKTA PILOT100对应的管路,确保管路插入试剂瓶底。Connect the prepared monomer solution, CAP A, CAP B, oxidant, thiolation agent, activator, decapping agent and acetonitrile to the corresponding pipelines of AKTA PILOT100, ensuring that the pipelines are inserted into the bottom of the reagent bottle.
合成方法设置完毕后,仪器各项工作准备就绪,点击运行,开始合成。在线观察记录每个detritylation峰面积。在合成过程中根据脱保护试剂实际使用量,进行补加操作。After the synthesis method is set up, the instrument is ready to work. Click Run to start the synthesis. Observe and record the area of each detritylation peak online. During the synthesis process, add the deprotection reagent according to the actual amount used.
合成结束后,氩气吹扫合成柱≥2h,按操作规程卸载合成柱。向合成柱内固相载体转移至反应瓶,加入甲胺水溶液和氨水,将反应瓶放入摇床中,35℃,2-3小时。将溶液过滤至圆底烧瓶中,再使用50%乙醇水溶液洗涤残留固相,再次过滤与之前滤液合并,将圆底烧瓶连接旋转蒸发仪,设置水温50℃蒸至无馏出,向圆底烧瓶内加入乙醇,混匀,再次蒸至无馏出,重复操作至瓶底出现白色粉末。将得到的白色粉末配制成溶液,使用反向层析柱进行纯化,取样检测OD260、纯度。将纯化的反义链溶液分装于西林瓶中冻干备用,并将产品密封储存于-20℃冰箱中。After the synthesis is completed, argon is purged into the synthesis column for ≥2h, and the synthesis column is unloaded according to the operating procedures. The solid phase carrier in the synthesis column is transferred to the reaction bottle, methylamine aqueous solution and ammonia water are added, and the reaction bottle is placed in a shaker at 35°C for 2-3 hours. The solution is filtered into a round-bottom flask, and the residual solid phase is washed with a 50% ethanol aqueous solution, filtered again and combined with the previous filtrate, the round-bottom flask is connected to a rotary evaporator, the water temperature is set to 50°C and evaporated until no distillation, ethanol is added to the round-bottom flask, mixed, and evaporated again until no distillation, and the operation is repeated until white powder appears at the bottom of the bottle. The obtained white powder is prepared into a solution, purified using a reverse chromatography column, and sampled to detect OD260 and purity. The purified antisense chain solution is divided into a syringe bottle and freeze-dried for standby use, and the product is sealed and stored in a -20°C refrigerator.
偶联载体的正义链(5’MVIP09偶联)的合成操作同反义链,其中装柱的Solid Support为Universal载体。所得中间体加DIPEA配制成溶液,加入5’MVIP亚磷酰胺单体,混匀,将反应瓶放入摇床中,35℃,2-3小时。The synthesis of the sense strand (5’MVIP09 coupling) of the coupled vector is the same as the antisense strand, where the Solid Support loaded on the column is the Universal vector. Add DIPEA to the intermediate to make a solution, add 5’MVIP phosphoramidite monomer, mix well, and place the reaction bottle in a shaker at 35°C for 2-3 hours.
RNA抑制剂的合成退火工艺描述:Description of the synthetic annealing process of RNA inhibitors:
取所得的正义链和反义链,1:1等摩尔混合在反应瓶中,水浴95℃5分钟后,关闭水浴锅电源,使其自然降温至40℃以下。向双链溶液中加入3M醋酸钠水溶液,混合均匀后,再加入适量体积的无水乙醇,混合均匀,将反应液放入-20℃冰箱内45min。冷冻高速离心机设置4℃预制冷,温度达到后,放入双链溶液,启动离心机。取出离心后的双链溶液,去除上清液,加入超纯水使固体完全溶解,取样检测OD260、纯度,可得到表14中的RNA抑制剂,将纯化的成品溶液分装于西林瓶中冻干备用,并将产品密封储存于-20℃冰箱中。Take the obtained positive and antisense strands, mix them in a reaction bottle in an equimolar ratio of 1:1, and after 5 minutes in a water bath at 95°C, turn off the power of the water bath and let it cool naturally to below 40°C. Add 3M sodium acetate aqueous solution to the double-stranded solution, mix evenly, then add an appropriate volume of anhydrous ethanol, mix evenly, and put the reaction solution in a -20°C refrigerator for 45 minutes. Set the refrigerated high-speed centrifuge to 4°C for pre-cooling. After the temperature is reached, put in the double-stranded solution and start the centrifuge. Take out the double-stranded solution after centrifugation, remove the supernatant, add ultrapure water to completely dissolve the solid, take samples to test OD260 and purity, and obtain the RNA inhibitors in Table 14. Dispense the purified finished solution into vials for freeze-drying for later use, and seal the product and store it in a -20°C refrigerator.
以上仅示例性列举出带有5'MVIP09/3'MVIP09偶联的RNA抑制剂的合成,本发明中所述的但未列举出来的RNA抑制剂都适用于这个规则,即当RNA抑制剂的正义链或反义链的3'端偶联有载体结构3'MVIP时,3'MVIP的solid support作为固相合成的起始单体;当RNA抑制剂的正义链或反义链的5'端偶联有载体结构5'MVIP时,5'MVIP亚磷酰胺单体作为固相合成的最后一个单体。参照本实施例所述的方法,本领域技术人员可以容易的合成本发明所涉及的其余的RNA抑制剂的合成。The above examples only exemplify the synthesis of RNA inhibitors coupled with 5'MVIP09/3'MVIP09. The RNA inhibitors described in the present invention but not listed here are all applicable to this rule, that is, when the 3' end of the sense chain or antisense chain of the RNA inhibitor is coupled with the carrier structure 3'MVIP, the solid support of 3'MVIP is used as the starting monomer for solid phase synthesis; when the 5' end of the sense chain or antisense chain of the RNA inhibitor is coupled with the carrier structure 5'MVIP, the 5'MVIP phosphoramidite monomer is used as the last monomer for solid phase synthesis. With reference to the method described in this embodiment, those skilled in the art can easily synthesize the remaining RNA inhibitors involved in the present invention.
实施例5 CFB抑制剂、C5抑制剂在PHH细胞的筛选实验:Example 5 Screening experiment of CFB inhibitor and C5 inhibitor in PHH cells:
本实施例的RNA抑制剂选自表1-7,通过PHHs细胞自由摄取验证RNA抑制剂的抑制效果。The RNA inhibitors of this example are selected from Tables 1-7, and the inhibitory effects of the RNA inhibitors are verified by free uptake by PHHs cells.
验证方法:Day 0,铺板PHHs细胞,用RNAiMAX将化合物转染进细胞。转染48h后,利用Super总RNA提取试剂盒(Promega-LS1040)提取总RNA,利用One-Step gDNA Removal进行cDNA合成,再利用Green qPCR SuperMix(+Dye I)进行qPCR检测。Verification method: Day 0, plate PHHs cells and use RNAiMAX transfected the compound into cells. 48 hours after transfection, Total RNA was extracted using the Super Total RNA Extraction Kit (Promega-LS1040), and cDNA was synthesized using One-Step gDNA Removal. Green qPCR SuperMix (+Dye I) was used for qPCR detection.
数据分析:依据各样品的Ct值计算样品中目的基因mRNA表达水平,通过ΔΔCt相对定量法进行计算。目的基因相对表达量使用2-ΔΔCT表示。计算公式如下:ΔCT=目的基因平均Ct值-内参基因平均Ct值;ΔΔCT=ΔCT(加药组)-ΔCT(对照组);目的基因mRNA相对表达量=2-ΔΔCT;目的基因抑制率=(1-value of sample/mean value of RNAiMAX Control)×100%,结果以三个复孔的mean±SD表示。考察RNA抑制剂在浓度500nM、100nM、10nM下和1nM、0.02nM,10nM、1nM和0.1nM下对PHH细胞的补体系统mRNA抑制效果。CFB RNA抑制剂在PHH细胞的抑制效果的试验结果见表16-1。Data analysis: The target gene mRNA expression level in the sample was calculated based on the Ct value of each sample, and the calculation was performed by the ΔΔCt relative quantitative method. The relative expression of the target gene was expressed by 2-ΔΔCT. The calculation formula is as follows: ΔCT = average Ct value of the target gene - average Ct value of the reference gene; ΔΔCT = ΔCT (drug group) - ΔCT (control group); relative expression of the target gene mRNA = 2-ΔΔCT; target gene inhibition rate = (1-value of sample/mean value of RNAiMAX Control) × 100%, and the results are expressed as mean ± SD of three replicate wells. The inhibitory effect of RNA inhibitors on the complement system mRNA of PHH cells at concentrations of 500nM, 100nM, 10nM, 1nM, 0.02nM, 10nM, 1nM and 0.1nM was investigated. The experimental results of the inhibitory effect of CFB RNA inhibitors on PHH cells are shown in Table 16-1.
表16-1 CFB RNA抑制剂在PHH细胞的抑制效果 Table 16-1 Inhibitory effect of CFB RNA inhibitor on PHH cells
实施例6 CFB、C5、C3修饰序列RNA抑制剂体外抑制补体系统基因表达试验Example 6 In vitro study on inhibition of complement system gene expression by CFB, C5, and C3 modified sequence RNA inhibitors
本实施例的RNA抑制剂选自表7。The RNA inhibitors of this example are selected from Table 7.
实施例6-1由实施例4所述的方法制备RNA抑制剂。参照实施例2的试验方式,考察RNA抑制剂在浓度1nM、0.01nM,下对Hep3B细胞中的CFB mRNA、C5 mRNA、C3 mRNA抑制效果。所得试验结果见表17-1到表17-5。Example 6-1 RNA inhibitors were prepared by the method described in Example 4. Referring to the test method of Example 2, the inhibitory effects of RNA inhibitors on CFB mRNA, C5 mRNA, and C3 mRNA in Hep3B cells at concentrations of 1 nM and 0.01 nM were investigated. The test results are shown in Tables 17-1 to 17-5.
表17-1 RNA抑制剂对Hep3B细胞中C5 mRNA的抑制效果 Table 17-1 Inhibitory effect of RNA inhibitors on C5 mRNA in Hep3B cells
表17-2 RNA抑制剂对Hep3B细胞中C5mRNA的抑制效果 Table 17-2 Inhibitory effect of RNA inhibitors on C5 mRNA in Hep3B cells
表17-3 RNA抑制剂对Hep3B细胞中C5 mRNA的抑制效果 Table 17-3 Inhibitory effect of RNA inhibitors on C5 mRNA in Hep3B cells
表17-4 RNA抑制剂在Hep3B细胞中体外抑制C3 mRNA的抑制效果 Table 17-4 Inhibitory effect of RNA inhibitors on C3 mRNA in Hep3B cells in vitro
实施例6-2 RNA抑制剂体外抑制C3基因EC50的测定实验Example 6-2 Experimental study on the determination of EC50 of RNA inhibitors for inhibiting C3 gene in vitro
本实施例的RNA抑制剂选自表7。考察RNA抑制剂Kylo-27-DS8201、Kylo-27-DS8771和Kylo-27-DS8141在不同浓度下对Hep3B细胞的C3 mRNA抑制效果,每个浓度测试3个抑制率数据,取其均值。依实验数据绘制抑制率-浓度曲线,计算出相应的EC50、EC75、EC85和EC95。所得试验结果如表18-1和表18-2。The RNA inhibitors of this embodiment are selected from Table 7. The RNA inhibitors Kylo-27-DS8201, Kylo-27-DS8771 and Kylo-27-DS8141 were investigated for their inhibitory effects on C3 mRNA in Hep3B cells at different concentrations. Three inhibition rate data were tested for each concentration and the average was taken. The inhibition rate-concentration curve was drawn based on the experimental data, and the corresponding EC50, EC75, EC85 and EC95 were calculated. The obtained test results are shown in Tables 18-1 and 18-2.
表18-1 RNA抑制剂对Hep3B细胞中C3 mRNA的抑制效果 Table 18-1 Inhibitory effect of RNA inhibitors on C3 mRNA in Hep3B cells
表18-2 RNA抑制剂在Hep3B细胞中对C3 mRNA抑制的EC值 Table 18-2 EC values of RNA inhibitors for C3 mRNA inhibition in Hep3B cells
实施例7应用小鼠评估RNA抑制剂的体内活性Example 7 Evaluation of the in vivo activity of RNA inhibitors using mice
本实施例的RNA抑制剂选自表7,通过人源化CFB小鼠验证RNA抑制剂的抑制效果。The RNA inhibitors of this example are selected from Table 7, and the inhibitory effects of the RNA inhibitors are verified by humanized CFB mice.
实施例7-1:Kylo-17抑制剂对人源化CFB小鼠蛋白水平抑制效果Example 7-1: Inhibitory effect of Kylo-17 inhibitor on protein levels in humanized CFB mice
于试验动物适应性饲养后,按Day-1血浆中hCFB蛋白含量随机分为生理盐水组,Kylo-17-DS2761、Kylo-17-DS2821、Kylo-17-DS2811、Kylo-17-DS2751、Kylo-17-DS2861组。每组5只。通过皮下单次注射给药,给药剂量为3mg/kg,给药体积为5mL/kg,给药浓度分别为0.6mg/mL,给药当天记为Day 0。动物标识采用耳标号进行个体标识。通过悬挂笼卡的方式对饲养笼进行识别。After the experimental animals were adapted to feeding, they were randomly divided into normal saline group, Kylo-17-DS2761, Kylo-17-DS2821, Kylo-17-DS2811, Kylo-17-DS2751, and Kylo-17-DS2861 groups according to the hCFB protein content in plasma on Day-1. There were 5 animals in each group. The drug was administered by a single subcutaneous injection, with a dose of 3 mg/kg, a volume of 5 mL/kg, and a concentration of 0.6 mg/mL. The day of administration was recorded as Day 0. The animals were individually identified by ear tags. The cages were identified by hanging cage cards.
检测时间:于给药前Day-1,给药后Day 7、Day 14、Day 21、Day 28,Day 35和Day 42目内眦取血约200μL。全血样品离心前37℃水浴1h,3000r离心10分钟,收集上清,即为新鲜得到的血清样本,用于hCFB蛋白检测。Detection time: About 200 μL of blood was collected from the inner canthus of the eye on Day 1 before administration, Day 7, Day 14, Day 21, Day 28, Day 35 and Day 42 after administration. The whole blood sample was placed in a 37°C water bath for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for hCFB protein detection.
hCFB蛋白水平检测方法:采用ELISA kit检测(单孔);血清样品为全血样品离心制得后新鲜检测。Method for detecting hCFB protein level: ELISA kit was used for detection (single well); serum samples were obtained by centrifugation of whole blood samples and tested freshly.
试验数据以平均数±标准差(Mean±SD)表示,换算成抑制剂对小鼠hCFB蛋白抑制率的影响(%,Mean±SD)。T检验进行数据统计分析,P<0.05表示有统计学意义。实验结果如表19和图4所示:The experimental data were expressed as mean ± standard deviation (Mean ± SD), and converted into the inhibitor effect on the mouse hCFB protein inhibition rate (%, Mean ± SD). T test was used for data statistical analysis, and P < 0.05 indicated statistical significance. The experimental results are shown in Table 19 and Figure 4:
表19 hCFB小鼠给药后对小鼠血清中hCFB蛋白抑制率的影响(%,Mean±SD) 备注:与生理盐水组相比,“*”表示P≤0.05,“**”表示P≤0.01,“***”表示P≤0.001Table 19 Effect of hCFB administration on hCFB protein inhibition rate in mouse serum (%, Mean ± SD) Note: Compared with the saline group, "*" indicates P ≤ 0.05, "**" indicates P ≤ 0.01, and "***" indicates P ≤ 0.001
实施例7-2:Kylo-19抑制剂对人源化C5小鼠蛋白水平抑制效果Example 7-2: Inhibitory effect of Kylo-19 inhibitor on protein levels in humanized C5 mice
于试验动物适应性饲养后,按Day-3血清中hC5蛋白含量随机分为生理盐水组,Kylo-19-DS7511、Kylo-19-DS7901、Kylo-19-DS7891、Kylo-19-DS7921、Kylo-19-DS8001组,每组5只小鼠。通过皮下单次注射给药,给药剂量为3mg/kg,给药体积为5mL/kg,给药浓度分别为0.6mg/mL,给药当天记为Day 0。动物标识采用耳标号进行个体标识。通过悬挂笼卡的方式对饲养笼进行识别。After the experimental animals were adapted to feeding, they were randomly divided into saline group, Kylo-19-DS7511, Kylo-19-DS7901, Kylo-19-DS7891, Kylo-19-DS7921, Kylo-19-DS8001 group according to the hC5 protein content in the serum on Day-3, with 5 mice in each group. The drug was administered by a single subcutaneous injection, with a dose of 3 mg/kg, a volume of 5 mL/kg, and a concentration of 0.6 mg/mL. The day of administration was recorded as Day 0. The animals were individually identified by ear tags. The cages were identified by hanging cage cards.
检测时间:于给药前Day-3,给药后Day 7、Day 14、Day 21、Day 28、Day 35,Day 42和D 49目内眦取血约200μL。全血样品离心前37℃水浴1h,3000r离心10分钟,收集上清,即为新鲜得到的血清样本,用于hC5蛋白检测。Detection time: About 200 μL of blood was collected from the inner canthus of the eye on Day 3 before administration, Day 7, Day 14, Day 21, Day 28, Day 35, Day 42 and Day 49 after administration. The whole blood sample was placed in a 37°C water bath for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for hC5 protein detection.
试验数据以平均数±标准差(Mean±SD)表示,换算成抑制剂对小鼠hC5蛋白抑制率的影响(%,Mean±SD)。T检验进行数据统计分析,P<0.05表示有统计学意义。实验结果如表20和图5所示:The experimental data were expressed as mean ± standard deviation (Mean ± SD), and converted into the inhibitor effect on the mouse hC5 protein inhibition rate (%, Mean ± SD). T test was used for data statistical analysis, and P < 0.05 indicated statistical significance. The experimental results are shown in Table 20 and Figure 5:
表20 hC5小鼠给药后对小鼠血清中hC5蛋白抑制率的影响(%,Mean±SD)备注:与正常对照组相比,“*”表示P≤0.05,“**”表示P≤0.01,“***”表示P≤0.001Table 20 Effect of hC5 administration on the inhibition rate of hC5 protein in mouse serum (%, Mean ± SD) Note: Compared with the normal control group, "*" indicates P≤0.05, "**" indicates P≤0.01, and "***" indicates P≤0.001
实施例7-3:Kylo-19抑制剂对人源化C5小鼠蛋白水平抑制效果Example 7-3: Inhibitory effect of Kylo-19 inhibitor on protein levels in humanized C5 mice
于试验动物适应性饲养后,按Day-3血清中hC5蛋白含量随机分为生理盐水组,Kylo-19-DS7871、Kylo-19-DS7881组,每组5只小鼠。通过皮下单次注射给药,给药剂量为3mg/kg,给药体积为5mL/kg,给药浓度分别为0.6mg/mL,给药当天记为Day 0。动物标识采用耳标号进行个体标识。通过悬挂笼卡的方式对饲养笼进行识别。After the experimental animals were adapted to feeding, they were randomly divided into saline group, Kylo-19-DS7871 group, and Kylo-19-DS7881 group according to the hC5 protein content in the serum on Day-3, with 5 mice in each group. The drug was administered by a single subcutaneous injection, with a dose of 3 mg/kg, a volume of 5 mL/kg, and a concentration of 0.6 mg/mL. The day of administration was recorded as Day 0. The animals were individually identified by ear tags. The cages were identified by hanging cage cards.
检测时间:于给药前Day-3,给药后Day 7、Day 14、Day 21、Day 28、Day 35,Day 42和D 49目内眦取血约200μL。全血样品离心前37℃水浴1h,3000r离心10分钟,收集上清,即为新鲜得到的血清样本,用于hC5蛋白检测。Detection time: About 200 μL of blood was collected from the inner canthus of the eye on Day 3 before administration, Day 7, Day 14, Day 21, Day 28, Day 35, Day 42 and Day 49 after administration. The whole blood sample was placed in a 37°C water bath for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for hC5 protein detection.
试验数据以平均数±标准差(Mean±SD)表示,换算成抑制剂对小鼠hC5蛋白抑制率的影响(%,Mean±SD)。T检验进行数据统计分析,P<0.05表示有统计学意义。实验结果如表21和图6所示:The experimental data were expressed as mean ± standard deviation (Mean ± SD), and converted into the inhibitor effect on the mouse hC5 protein inhibition rate (%, Mean ± SD). T test was used for data statistical analysis, and P < 0.05 indicated statistical significance. The experimental results are shown in Table 21 and Figure 6:
表21 hC5小鼠给药后对小鼠血清中hC5蛋白抑制率的影响(%,Mean±SD)备注:与正常对照组相比,“*”表示P≤0.05,“**”表示P≤0.01,“***”表示P≤0.001Table 21 Effect of hC5 administration on the hC5 protein inhibition rate in mouse serum (%, Mean ± SD) Note: Compared with the normal control group, "*" indicates P≤0.05, "**" indicates P≤0.01, and "***" indicates P≤0.001
挑选抑制效果显著的抑制剂优化后进行食蟹猴实验。Inhibitors with significant inhibitory effects were selected and optimized for cynomolgus monkey experiments.
实施例8应用食蟹猴评估RNA抑制剂的体内活性Example 8 Evaluation of the in vivo activity of RNA inhibitors using cynomolgus monkeys
实施例8-1CFB抑制剂在NHP食蟹猴体内药效活性验证实验Example 8-1 Validation experiment of the pharmacodynamic activity of CFB inhibitors in NHP cynomolgus monkeys
本实施例的RNA抑制剂选自表7,通过食蟹猴验证阳性参照组、Kylo-17-DS2911抑制剂在NHP食蟹猴体内血清CFB蛋白水平表达的抑制效果和CFB mRNA水平的影响评估。阳性参照组选用的抑制剂为:正义链:AsAsGAGAfAGfUfCfGUUUCAUUCAU-L96,反义链:AsfUsGAAfUGfAfAACGAfCUfUCUCUUsGsU。The RNA inhibitors of this embodiment are selected from Table 7, and the inhibitory effects of the positive reference group and Kylo-17-DS2911 inhibitor on the expression of serum CFB protein level and CFB mRNA level in NHP cynomolgus monkeys are verified by cynomolgus monkeys. The inhibitors selected for the positive reference group are: positive chain: AsAsGAGAfAGfUfCfGUUUCAUUCAU-L96, antisense chain: AsfUsGAAfUGfAfAACGAfCUfUCUCUUsGsU.
健康食蟹猴适应性饲养后,于Day-1进行取血,检测血清中CFB蛋白含量,根据CFB蛋白含量进行动物分组,分为正常对照组,阳性参照组、Kylo-17-DS2911。给药剂量为6mg/kg,正常对照组组2只动物,雌雄各1只;阳性参照组、G3组每组3只动物,2雄1雌。单次皮下注射给药(颈背部注射),给药体积为1mL/kg,给药当天记为Day 0。于给药前Day-2,给药后Day 7、Day 14、Day 21、Day 28,每周静脉采血一次直至试验终点D91,检测NHP食蟹猴血清中CFB蛋白水平。After the healthy cynomolgus monkeys were adapted to feeding, blood was collected on Day-1 to detect the CFB protein content in the serum. The animals were grouped according to the CFB protein content, and divided into normal control group, positive reference group, and Kylo-17-DS2911. The dosage was 6 mg/kg, with 2 animals in the normal control group, 1 male and 1 female; 3 animals in each of the positive reference group and G3 group, 2 males and 1 female. A single subcutaneous injection (neck back injection) was administered, with a dosing volume of 1 mL/kg, and the day of administration was recorded as Day 0. On Day-2 before administration, Day 7, Day 14, Day 21, and Day 28 after administration, venous blood was collected once a week until the end of the experiment D91 to detect the CFB protein level in the serum of NHP cynomolgus monkeys.
CFB蛋白水平检测方法:采用ELISA kit检测(单孔);血清样品为全血样品离心制得后新鲜检测。检测时间:于给药前Day-1,给药后Day 7、Day 14、Day 21、Day 28,每周静脉采血一次直至试验终点。每次取血约2mL。全血样品离心前室温静置1h,3000r离心10分钟,收集上清,即为新鲜得到的血清样本,用于CFB蛋白检测。CFB protein level detection method: ELISA kit detection (single well); serum samples are freshly tested after centrifugation of whole blood samples. Detection time: Day-1 before administration, Day 7, Day 14, Day 21, Day 28 after administration, and venous blood collection once a week until the end of the test. About 2mL of blood is collected each time. The whole blood sample is left at room temperature for 1 hour before centrifugation, centrifuged at 3000r for 10 minutes, and the supernatant is collected, which is the freshly obtained serum sample for CFB protein detection.
肝脏组织中CFB mRNA水平检测方法:食蟹猴肝脏活检肝穿,用探针法qPCR法测定肝脏中靶点的mRNA水平。Method for detecting CFB mRNA levels in liver tissue: Liver biopsy was performed on crab-eating macaques, and the mRNA level of the target in the liver was determined using the probe-based qPCR method.
试验数据以平均数±标准差(Mean±SD)表示,采用GraphPad Prism 8.3分析软件进行数据作图分析。T检验进行数据统计分析,P<0.05表示有统计学意义。The experimental data were expressed as mean ± standard deviation (Mean ± SD), and GraphPad Prism 8.3 analysis software was used for data plotting and analysis. T test was used for data statistical analysis, and P < 0.05 indicated statistical significance.
CFB蛋白水平试验结果如表23,图8所示;CFB mRNA水平试验结果如表24,图9所示:The results of the CFB protein level test are shown in Table 23 and Figure 8; the results of the CFB mRNA level test are shown in Table 24 and Figure 9:
表23 CFB RNA抑制剂对NHP食蟹猴CFB蛋白抑制率的影响(%,Mean±SD) Table 23 Effect of CFB RNA inhibitor on the inhibition rate of CFB protein in NHP cynomolgus monkeys (%, Mean ± SD)
续表23 Table 23
表24 CFB RNA抑制剂对食蟹猴肝脏组织CFB mRNA水平的影响 Table 24 Effects of CFB RNA inhibitor on CFB mRNA levels in liver tissue of cynomolgus monkeys
从表23的试验结果可知:CFB蛋白水平方面:在给药后D28抑制率迅速上升,且在D28-D63可持续抑制CFB蛋白水平(抑制率范围分别为78.8%-89.52%,P<0.05or P<0.01or P<0.001),D70-D91抑制率范围分别为64.23%-72.18%。从D21开始Kylo-17-DS2911的抑制率反超阳参,表现出显著的抑制作用,且从D21-D91天的抑制率可以看出,抑制效果稳定。从D70-D91Kylo-17-DS2911对比阳参的抑制率可知:本发明的抑制剂具有更稳定的抑制效果。From the test results in Table 23, it can be seen that in terms of CFB protein level, the inhibition rate rose rapidly on D28 after administration, and the CFB protein level could be continuously inhibited from D28 to D63 (the inhibition rate ranged from 78.8% to 89.52%, P<0.05 or P<0.01 or P<0.001), and the inhibition rate ranged from D70 to D91 from 64.23% to 72.18%. From D21, the inhibition rate of Kylo-17-DS2911 surpassed that of Yangshen, showing a significant inhibitory effect, and from the inhibition rate of D21 to D91, it can be seen that the inhibitory effect is stable. From the inhibition rate of Kylo-17-DS2911 compared with Yangshen on D70-D91, it can be seen that the inhibitor of the present invention has a more stable inhibitory effect.
从表24的试验结果可知:肝脏组织CFB mRNA水平方面:Kylo-17-DS2911在给药后D35肝脏组织中CFB mRNA水平显著下降,抑制率为96.5%,且在D67、D84仍能稳定高效抑制CFB mRNA表达,抑制率分别为89.66%、89.17%。与阳参相比具有更显著的CFB mRNA抑制水平,且抑制更稳定更持久。From the test results in Table 24, we can see that: in terms of CFB mRNA levels in liver tissue: Kylo-17-DS2911 significantly decreased CFB mRNA levels in liver tissue at D35 after administration, with an inhibition rate of 96.5%, and it can still stably and efficiently inhibit CFB mRNA expression at D67 and D84, with inhibition rates of 89.66% and 89.17%, respectively. Compared with Yangshen, it has a more significant CFB mRNA inhibition level, and the inhibition is more stable and lasting.
实施例8-2C5抑制剂对NHP食蟹猴血清中C5蛋白含量、CH50活性的影响Example 8-2 Effect of C5 inhibitor on C5 protein content and CH50 activity in serum of NHP cynomolgus monkeys
本实施例的RNA抑制剂选自表7,通过食蟹猴验证阳性参照组(正义链:AsAsfGCfAAfGAfUfAfUUfUUUfAUfAAUA-L96,反义链:UsfAsfUUfAUAfAAfAAUAfUCfUUfGCUUsUsUdTdT)、Kylo-19-DS7881抑制剂在NHP食蟹猴体内血清C5蛋白含量、CH50活性的影响。The RNA inhibitors of this embodiment are selected from Table 7, and the positive reference group (sense chain: AsAsfGCfAAfGAfUfAfUUfUUUfAUfAAUA-L96, antisense chain: UsfAsfUUfAUAfAAfAAUAfUCfUUfGCUUsUsUdTdT) and the effects of the Kylo-19-DS7881 inhibitor on serum C5 protein content and CH50 activity in NHP crab-eating monkeys are verified by crab-eating monkeys.
健康食蟹猴适应性饲养后,于Day-2进行取血,检测血清中C5蛋白含量,根据C5蛋白含量进行动物分组,分为正常对照组G1,阳性参照组G2、Kylo-19-DS7881G3。给药剂量为6mg/kg,正常对照组2只动物,雌雄各1只;G2、G3组每组3只动物,2雌1雄。单次皮下注射给药(颈背部注射),给药体积为1mL/kg,给药当天记为Day 0。于给药前Day-2,给药后Day 7、Day 14、Day 21、Day 28,每周静脉采血一次直至试验终点D91,检测NHP食蟹猴血清中C5蛋白水平。After the healthy cynomolgus monkeys were adapted to feeding, blood was collected on Day-2 to detect the C5 protein content in the serum. The animals were grouped according to the C5 protein content, and divided into normal control group G1, positive reference group G2, and Kylo-19-DS7881G3. The dosage was 6 mg/kg, with 2 animals in the normal control group, 1 male and 1 female; 3 animals in each group of G2 and G3, 2 females and 1 male. A single subcutaneous injection (neck back injection) was administered, the administration volume was 1 mL/kg, and the day of administration was recorded as Day 0. On Day-2 before administration, Day 7, Day 14, Day 21, and Day 28 after administration, venous blood was collected once a week until the end of the experiment D91 to detect the C5 protein level in the serum of NHP cynomolgus monkeys.
于给药前Day-1,给药后Day 7、Day 14、Day 21、Day 28,每周静脉采血一次直至试验终点。每次取血约2mL。全血样品离心前室温静置1h,3000r离心10分钟,收集上清,即为新鲜得到的血清样本,用于C5蛋白检测。C5蛋白水平检测方法:采用ELISA kit检测(单孔);血清样品为全血样品离心制得后新鲜检测。On Day 1 before administration, Day 7, Day 14, Day 21, and Day 28 after administration, venous blood was collected once a week until the end of the experiment. About 2 mL of blood was collected each time. The whole blood sample was allowed to stand at room temperature for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected, which was the fresh serum sample for C5 protein detection. C5 protein level detection method: ELISA kit detection (single well); serum samples were freshly tested after whole blood samples were centrifuged.
检测给药前Day-2,给药后Day 14、Day 28、Day 42、Day 49,Day 56、Day 63、Day 70,Day 77血清样本中CH50活性。CH50活性检测方法:采用ELISA kit检测(单孔);血清样品为全血样品离心后得到。Detect CH50 activity in serum samples on Day 2 before administration, Day 14, Day 28, Day 42, Day 49, Day 56, Day 63, Day 70, and Day 77 after administration. CH50 activity detection method: ELISA kit detection (single well); serum samples are obtained after centrifugation of whole blood samples.
试验数据以平均数±标准差(Mean±SD)表示,采用GraphPad Prism 8.3分析软件进行数据作图分析。T检验进行数据统计分析,P<0.05表示有统计学意义。The experimental data were expressed as mean ± standard deviation (Mean ± SD), and GraphPad Prism 8.3 analysis software was used for data plotting and analysis. T test was used for data statistical analysis, and P < 0.05 indicated statistical significance.
C5蛋白抑制率结果如表24,图10所示;CH50活性水平试验结果如表25,图11所示:The results of C5 protein inhibition rate are shown in Table 24 and Figure 10; the results of CH50 activity level test are shown in Table 25 and Figure 11:
表24 C5 RNA抑制剂对NHP食蟹猴C5蛋白抑制率的影响(%,Mean±SD)备注:与正常对照组相比,“*”表示P≤0.05,“**”表示P≤0.01,“***”表示P≤0.001Table 24 Effect of C5 RNA inhibitor on the inhibition rate of C5 protein in NHP cynomolgus monkeys (%, Mean ± SD) Note: Compared with the normal control group, "*" indicates P≤0.05, "**" indicates P≤0.01, and "***" indicates P≤0.001
续表24 备注:与正常对照组相比,“*”表示P≤0.05,“**”表示P≤0.01,“***”表示P≤0.001Table 24 Note: Compared with the normal control group, "*" indicates P≤0.05, "**" indicates P≤0.01, and "***" indicates P≤0.001
表25 C5 RNA抑制剂对NHP食蟹猴CH50活性保留水平的影响(Mean±SD) Table 25 Effect of C5 RNA inhibitor on the retention level of CH50 activity in NHP cynomolgus monkeys (Mean±SD)
续表25 Table 25
从表24、图10可以看出本发明的Kylo-19-DS7881给药后D7血清C5蛋白水平显著下降,抑制率为71.4%,且D14进一步下降,在D14-D77期间持续稳定抑制血清C5蛋白水平表达(抑制率范围分别为89.2%-100%,P<0.05or P<0.01or P<0.001),在给药后D84蛋白水平有所回升,D84、D91抑制率分别为83.4%、79.4%。相比阳性参照在D56天后抑制能力显著优秀,相比阳性参照要更加稳定且抑制效果持续性久。From Table 24 and Figure 10, it can be seen that the serum C5 protein level of Kylo-19-DS7881 of the present invention decreased significantly on D7 after administration, with an inhibition rate of 71.4%, and further decreased on D14. The expression of serum C5 protein level was continuously and stably inhibited during D14-D77 (the inhibition rate range was 89.2%-100%, P<0.05or P<0.01or P<0.001), and the protein level on D84 rebounded after administration, with inhibition rates of 83.4% and 79.4% on D84 and D91, respectively. Compared with the positive reference, the inhibition ability was significantly better after D56 days, and it was more stable and the inhibition effect lasted longer than the positive reference.
从表25、图11可以看出本发明的Kylo-19-DS7881给药后D14血清CH50活性显著下降,CH50活性保留水平为35%,在D28-D63期间持续稳定降低血清CH50活性(保留水平范围分别为38.8%-40.3%,P<0.05),在给药后D70 CH50活性有所回升,在D70、D77 CH50活性保留水平分别为48.7%、58.4%;相比阳性参照的降低CH50活性效果更优,且降低效果持久性更强。It can be seen from Table 25 and Figure 11 that the serum CH50 activity of Kylo-19-DS7881 of the present invention decreased significantly on D14 after administration, and the CH50 activity retention level was 35%. The serum CH50 activity continued to decrease steadily during D28-D63 (the retention levels ranged from 38.8% to 40.3%, respectively, P<0.05). The CH50 activity rebounded on D70 after administration, and the CH50 activity retention levels at D70 and D77 were 48.7% and 58.4%, respectively. Compared with the positive reference, the effect of reducing CH50 activity is better, and the reducing effect is more persistent.
实施例8-3 C3抑制剂对NHP食蟹猴血清中C3蛋白含量的影响Example 8-3 Effect of C3 inhibitor on C3 protein content in serum of NHP cynomolgus monkeys
本实施例的RNA抑制剂选自表7,通过食蟹猴验证Kylo-27-DS8141、Kylo-27-DS8201抑制剂在NHP食蟹猴体内血清C3蛋白水平表达的抑制效果的影响评估。The RNA inhibitors of this example are selected from Table 7, and the inhibitory effects of Kylo-27-DS8141 and Kylo-27-DS8201 inhibitors on the expression of serum C3 protein levels in NHP cynomolgus monkeys were evaluated.
健康食蟹猴适应性饲养后,于Day-1进行取血,检测血清中C3蛋白含量,根据C3蛋白含量进行动物分组,分为正常对照组,Kylo-27-DS8141、Kylo-27-DS8131、Kylo-27-DS8201、Kylo-27-DS8211。给药剂量为6mg/kg,每组3只动物,2雄1雌。单次皮下注射给药(颈背部注射),给药体积为1mL/kg,给药当天记为Day 0。After healthy cynomolgus monkeys were adapted to feeding, blood was collected on Day-1 to detect the C3 protein content in serum. The animals were grouped according to the C3 protein content, and divided into normal control group, Kylo-27-DS8141, Kylo-27-DS8131, Kylo-27-DS8201, and Kylo-27-DS8211. The dosage was 6 mg/kg, with 3 animals in each group, 2 males and 1 female. A single subcutaneous injection (neck back injection) was administered, with a volume of 1 mL/kg, and the day of administration was recorded as Day 0.
于给药前Day-1,给药后Day 7、Day 14、Day 21、Day 28、Day 35、Day 42,每周静脉采血一次直至试验终点。每次取血约2mL。全血样品离心前室温静置1h,3000r离心10分钟,收集上清,即为新鲜得到的血清样本,用于C3蛋白检测。On Day 1 before administration, Day 7, Day 14, Day 21, Day 28, Day 35, and Day 42 after administration, venous blood was collected once a week until the end of the experiment. About 2 mL of blood was collected each time. The whole blood sample was left at room temperature for 1 hour before centrifugation, and centrifuged at 3000r for 10 minutes. The supernatant was collected as the fresh serum sample for C3 protein detection.
C3蛋白水平检测方法:采用ELISA kit检测(单孔);血清样品为全血样品离心制得后新鲜检测。C3 protein level detection method: ELISA kit detection (single well); serum samples are freshly tested after centrifugation of whole blood samples.
试验数据以平均数±标准差(Mean±SD)表示,采用GraphPad Prism 8.3分析软件进行数据作图分析。T检验进行数据统计分析,P<0.05表示有统计学意义。试验结果如表26和图12所示。The experimental data were expressed as mean ± standard deviation (Mean ± SD), and GraphPad Prism 8.3 analysis software was used for data plotting and analysis. T test was used for data statistical analysis, and P < 0.05 indicated statistical significance. The experimental results are shown in Table 26 and Figure 12.
表26 C3 RNA抑制剂对NHP食蟹猴C3蛋白抑制率的影响(%,Mean±SD) Table 26 Effect of C3 RNA inhibitor on the inhibition rate of C3 protein in NHP cynomolgus monkeys (%, Mean ± SD)
续表26备注:与正常对照组相比,“*”表示P≤0.05,“**”表示P≤0.01,“***”表示P≤0.001Table 26 Note: Compared with the normal control group, "*" indicates P≤0.05, "**" indicates P≤0.01, and "***" indicates P≤0.001
[根据细则91更正 20.01.2025]
由表26和图12可知:Kylo-27-DS8141和Kylo-27-DS8201的C3蛋白抑制率较为显著,且持续性好,Kylo-27-DS8141在D14-D70期间持续稳定抑制血清C3蛋白水平表达(抑制率范围分别为79.6%-91.6%,P<0.05or P<0.01),在D77、D84抑制率还能维持在74.3%、67.9%,持续性好。Kylo-27-DS8201在D14-D98期间持续稳定抑制血清C3蛋白水平表达,D42抑制率达到96.8%,到D98依然能维持85.1%,持续性好。[Corrected 20.01.2025 in accordance with Article 91]
As shown in Table 26 and Figure 12, the C3 protein inhibition rates of Kylo-27-DS8141 and Kylo-27-DS8201 are more significant and persistent. Kylo-27-DS8141 continuously and stably inhibits the expression of serum C3 protein levels during D14-D70 (the inhibition rate range is 79.6%-91.6%, P<0.05or P<0.01), and the inhibition rates can be maintained at 74.3% and 67.9% at D77 and D84, respectively, with good persistence. Kylo-27-DS8201 continuously and stably inhibits the expression of serum C3 protein levels during D14-D98, with the inhibition rate reaching 96.8% at D42 and still maintaining 85.1% at D98, with good persistence.
Claims (34)
The RNA inhibitor or a pharmaceutically acceptable salt thereof according to any one of claims 1 to 25, characterized in that the RNA inhibitor further contains carrier structures 5'MVIP and 3'MVIP, and the structure of the RNA inhibitor is as shown in Formula Ia, Ib or Ic:
The transition point R1 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
The transition point R2 is a heterocyclic or carbocyclic structure containing N, S or O as shown below:
The liver-targeting specific ligand X is the same or different within each of 5'MVIP and 3'MVIP or between 5'MVIP and 3'MVIP, and is selected from monosaccharides and their derivatives, preferably N-acetylgalactosamine and its derivatives, and more preferably selected from the following structures:
The branched chain L is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from one or more of the following structures:
The linker B is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from the following structures:
The connecting chain D is the same or different within each of the 5'MVIP and the 3'MVIP or between the 5'MVIP and the 3'MVIP, and is selected from the following structures:
The RNA inhibitor or a pharmaceutically acceptable salt thereof according to claim 26, characterized in that the 5'MVIP is 5'MVIP01 or 5'MVIP09 as shown below, and the 3'MVIP is 3'MVIP01, 3'MVIP09 or 3'MVIP17 as shown below:
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| CN105814205A (en) * | 2013-12-12 | 2016-07-27 | 阿尔尼拉姆医药品有限公司 | Complement component iRNA compositions and methods of use thereof |
| WO2023031359A1 (en) * | 2021-09-02 | 2023-03-09 | Silence Therapeutics Gmbh | Nucleic acids for inhibiting expression of complement factor b (cfb) in a cell |
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| WO2023076451A1 (en) * | 2021-10-29 | 2023-05-04 | Alnylam Pharmaceuticals, Inc. | Complement factor b (cfb) irna compositions and methods of use thereof |
| CN116096381A (en) * | 2020-04-30 | 2023-05-09 | 阿尔尼拉姆医药品有限公司 | Complement factor B (CFB) iRNA compositions and methods of use thereof |
| WO2023141247A2 (en) * | 2022-01-20 | 2023-07-27 | Alexion Pharmaceuticals, Inc. | Compositions and methods for inhibiting complement factor b |
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| CN105814205A (en) * | 2013-12-12 | 2016-07-27 | 阿尔尼拉姆医药品有限公司 | Complement component iRNA compositions and methods of use thereof |
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