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WO2025111547A1 - 2,3-dihydropyrollopyridine carboxamide compounds and methods of use thereof - Google Patents

2,3-dihydropyrollopyridine carboxamide compounds and methods of use thereof Download PDF

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Publication number
WO2025111547A1
WO2025111547A1 PCT/US2024/057078 US2024057078W WO2025111547A1 WO 2025111547 A1 WO2025111547 A1 WO 2025111547A1 US 2024057078 W US2024057078 W US 2024057078W WO 2025111547 A1 WO2025111547 A1 WO 2025111547A1
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Prior art keywords
compound
mmol
mixture
pyrrolo
dihydro
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French (fr)
Inventor
Christopher M. Yates
Travis T. Wager
Alessandra Bartolozzi
John Robert Proudfoot
Thomas Andrew Wynn
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Rgenta Therapeutics Inc
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Rgenta Therapeutics Inc
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04Ortho-condensed systems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P21/00Drugs for disorders of the muscular or neuromuscular system
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D487/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
    • C07D487/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
    • C07D487/04Ortho-condensed systems
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D519/00Heterocyclic compounds containing more than one system of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring system not provided for in groups C07D453/00 or C07D455/00

Definitions

  • snRNAs Small nuclear RNAs
  • the major spliceosome comprises the U1, U2, U4, U5, and U6 snRNAs, and it catalyzes the removal of ⁇ 95% of human introns, while the remaining introns (called the U12-type of introns) are removed by the minor spliceosome, comprising the U11, U12, U4atac, U5, and U6atac snRNAs.
  • These snRNAs are in complex with their respective protein partners to form the functional unit of small nuclear ribonucleoproteins (snRNPs).
  • Splicing is a highly regulated process, with the regulation exerted by both cis- elements and trans-factors.
  • the cis-elements that are recognized by the snRNAs include the 5’-splice site, 3’-splice site, and the branchpoint, each of these associating with a sequence motif that is recognized by a component of the spliceosome.
  • intronic splicing enhancers ISE
  • ISS intronic splicing silencer
  • ESE exonic splicing enhancer
  • ESS exonic splicing enhancer
  • RBPs directly bind to the cis-elements in a sequencing-specific way, while other RBPs recognize RNA structures (e.g., RNA duplex or unpaired loop region), yet others function via protein-protein interaction.
  • RNA structures e.g., RNA duplex or unpaired loop region
  • Dysregulation of splicing is implicated in roughly half of human diseases. Some diseases are caused by mutations in the spliceosome components or RBPs, while others by mutations in the cis-elements such as splice sites, branchpoint, or the various splicing enhancers and silencers.
  • oligonucleotide-based therapeutics show unfavorable pharmacokinetics, can not be orally administered, and can not be delivered effectively to many tissues, especially the brain.
  • Small-molecule drugs have excellent pharmacokinetics, effective delivery, and bioavailability, and have only recently become available for modulating RNA splicing. Yet, the currently molecules come from a few limited chemical series. Thus, there is a great need to develop additional small molecule splicing modulators (SMSMs).
  • SMSMs small molecule splicing modulators
  • HD Huntington's disease
  • the normal allele of the HTT gene contains fewer than 36 CAG repeats, while the mutant allele contains more than 36 repeats.
  • Most HD patients carry one normal allele and one mutant allele that causes the disease. Functionally, the aberrant accumulation of CAG repeats is believed to confer a toxic gain of function on the mutant HD protein, causing it to aggregate, form protein deposits (ie, inclusion bodies), and induce cell death.
  • the severity of the disease generally reflects the extent of repeat expansion in the mutant HTT protein.
  • Myotonic dystrophy type 1 (DM1) and type 2 (DM2) are associated with long repeats of polyCUG and polyCCUG in the 3'-UTR and intron 1 regions of the transcription of myotonic dystrophy protein kinase (DMPK) and protein 9 of zinc finger (ZNF9), respectively. While normal individuals have up to 30 CTG repeats, DMI patients have a higher number of repeats ranging from 50 to thousands. The severity of the disease and the age of onset correlate with the number of repetitions. Adult-onset patients show milder symptoms and have fewer than 100 repeats, juvenile-onset DM1 patients have up to 500 repeats, and congenital cases typically have around 1,000 CTG repeats.
  • DM1 myotonic dystrophy protein kinase
  • ZNF9 zinc finger
  • RNA-BP sequester RNA-binding proteins
  • SMSMs small molecule splicing modulators
  • These SMSMs target regions of a primary RNA transcript that are cis-elements, such as splice sites, branch points, splicing enhancers, or splicing silencers. These regions may contain unpaired nucleotides in an RNA duplex, called bulges, which may occur naturally or result from disease.
  • RNA transcript When the SMSMs come into contact with an RNA transcript, the RNA transcript may be bound by the spliceosome or the other trans-factors, most notably RNA-binding proteins (RBPs).
  • RBPs RNA-binding proteins
  • the SMSMs reported herein may cause an alteration in the sequence or abundance of the mature transcript, which may, in turn, alter the sequence or abundance of the functional protein should the transcript be protein-coding, or the sequence or abundance of the functional RNA should the transcript be non-coding.
  • RBPs RNA-binding proteins
  • Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur
  • Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur
  • each R 1 is independently selected from halogen, -CN, C 1-6 alkyl, C 1-6 haloalkyl, C 1-6 alkoxy, C 3- 6 cycloalkyl, and 5-8 memebered heteroaryl
  • each R 2 is independently selected from halogen and C 1-6 alkyl
  • R 3 is selected from H and C 1-6 alkyl
  • each R a is independently selected from the group consisting of halogen, -OH, C 1-6 alkyl, C 1- 6 haloalkyl, oxo, C 3-6 cycloalkyl, -C(O)O-C 1-6 alkyl, -C(O)C 1-6 haloalkyl
  • the compound is a compound of formula (Ia), or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, 2, or 3; and the rest of the variables are as defined herein.
  • the compound is a compound of formula (Ib), or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein.
  • the compound is a compound of formula (Ic), or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein.
  • the compound is a compound formula (Id),
  • the present disclosure provides a compound obtainable by, or obtained by, a method for preparing a compound as described here (e.g., a method comprising one or more steps described in herein).
  • a pharmaceutical composition comprising a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)), or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable diluent or carrier.
  • the present disclosure provides an intermediate as described herein, being suitable for use in a method for preparing a compound as described herein (e.g., the intermediate is selected from the intermediates described herein).
  • the present disclosure provides a method of treating or preventing a disease or disorder disclosed herein in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of the present disclosure.
  • the present disclosure provides a method of treating a disease or disorder disclosed herein in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of the present disclosure.
  • a compound of the present disclosure e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)
  • a pharmaceutically acceptable salt thereof for use in treating or preventing a disease or disorder disclosed herein.
  • the present disclosure provides a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof for use in treating a disease or disorder disclosed herein.
  • a compound of the present disclosure e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)
  • a pharmaceutically acceptable salt thereof for treating or preventing a disease or disorder disclosed herein.
  • the present disclosure provides use of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof for treating a disease or disorder disclosed herein.
  • a compound of the present disclosure e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)
  • a pharmaceutically acceptable salt thereof in the manufacture of a medicament for treating or preventing a disease or disorder disclosed herein.
  • the present disclosure provides use of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof in the manufacture of a medicament for treating a disease or disorder disclosed herein.
  • a method of preparing a compound of the present disclosure e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)
  • the present disclosure provides a method of preparing a compound, comprising one or more steps described herein.
  • alkyl As used herein, “alkyl”, “C 1 , C 2 , C 3 , C 4 , C 5 , C 6 alkyl” or “C 1-6 alkyl” is intended to include C 1 , C 2 , C 3 , C 4 , C 5 , or C 6 straight chain (linear) saturated aliphatic hydrocarbon groups and C3, C4, C5, or C6 branched saturated aliphatic hydrocarbon groups.
  • C 1 - 6 alkyl is intended to include C 1 , C 2 , C 3 , C 4 , C 5, and C 6 alkyl groups.
  • alkyl examples include, moieties having from one to six carbon atoms, such as, but not limited to, methyl, ethyl, n-propyl, i-propyl, n-butyl, s-butyl, t-butyl, n-pentyl, i-pentyl, or n-hexyl.
  • a straight chain or branched alkyl has four or fewer carbon atoms.
  • alkoxy refers to the group -OR where R is linear or branched alkyl.
  • alkoxy When the term “alkoxy” is modified with a designated number of carbon atoms (e.g., C 1-6 alkoxy) the number of carbon atoms refers to the number of carbon atoms in the linear or branched alkyl R.
  • Particular alkoxy groups are methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, tert-butoxy, sec-butoxy, n-pentoxy, n-hexoxy, and 1,2- dimethylbutoxy.
  • Particular alkoxy groups are lower alkoxy, i.e., with between 1 and 6 carbon atoms (“C 1-6 alkoxy”).
  • cycloalkyl refers to a saturated hydrocarbon monocyclic or polycyclic (e.g., fused, bridged, or spiro rings) system having 3 to 30 carbon atoms (e.g., C3- 12 , C 3 - 10 , or C 3-8 ).
  • Examples of cycloalkyl include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, and adamantyl.
  • heterocyclyl refers to a saturated or partially unsaturated 3- 8 membered monocyclic (e.g., 4-7 membered monocyclic) or 7-12 membered bicyclic (fused, bridged, or spiro rings) having one or more heteroatoms e.g., 1 or 1-2 or 1-3 or 1-4 or 1-5 or 1-6 heteroatoms, or e.g.
  • heterocycloalkyl groups include, but are not limited to, piperidinyl, piperazinyl, pyrrolidinyl, dioxanyl, tetrahydrofuranyl, isoindolinyl, indolinyl, imidazolidinyl, pyrazolidinyl, oxazolidinyl, isoxazolidinyl, triazolidinyl, oxiranyl, azetidinyl, oxetanyl, thietanyl, 1,2,3,6- tetrahydropyridinyl, tetrahydropyranyl, dihydropyranyl, pyranyl, morpholinyl, tetrahydrothiopyranyl, 1,4-diazepanyl, 1,4-oxazepanyl, 2-ox
  • heterocycloalkyl In the case of multicyclic heterocycloalkyl, only one of the rings in the heterocycloalkyl needs to be non-aromatic (e.g., 4,5,6,7-tetrahydrobenzo[c]isoxazolyl).
  • heteroaryl is intended to include a stable 5-, 6-, or 7- membered monocyclic or 7-, 8-, 9-, 10-, 11- or 12-membered bicyclic aromatic heterocyclic ring (e.g., an 8-12 membered bicyclic aromatic heterocyclic ring) which consists of carbon atoms and one or more heteroatoms, e.g., 1 or 1-2 or 1-3 or 1-4 or 1-5 or 1-6 heteroatoms, or e.g. ⁇ 1, 2, 3, 4, 5, or 6 heteroatoms, independently selected from the group consisting of nitrogen, oxygen and sulphur.
  • the nitrogen atom may be substituted or unsubstituted (i.e., N or NR wherein R is H or other substituents, as defined).
  • heteroaryl groups include pyrrole, furan, thiophene, thiazole, isothiazole, imidazole, triazole, tetrazole, pyrazole, oxazole, isoxazole, pyridine, pyrazine, pyridazine, pyrimidine, and the like.
  • Heteroaryl groups can also be fused or bridged with alicyclic or heterocyclic rings, which are not aromatic so as to form a multicyclic system (e.g., 4,5,6,7- tetrahydrobenzo[c]isoxazolyl).
  • heteroaryl includes multicyclic heteroaryl groups, e.g., tricyclic, bicyclic, e.g., benzoxazole, benzodioxazole, benzothiazole, benzoimidazole, benzothiophene, quinoline, isoquinoline, naphthrydine, indole, benzofuran, purine, benzofuran, deazapurine, indolizine.
  • Bicyclic and tricyclic systems can be edge-fused, spiro-fused, or bridged systems.
  • substituted means that any one or more hydrogen atoms on the designated atom is replaced with a selection from the indicated groups, provided that the designated atom’s normal valency is not exceeded, and that the substitution results in a stable compound.
  • substituted groups containing one or more heteroatoms e.g., substituted heterocyclyl or substituted heteroaryl
  • the heteroatoms may be substituted provided that the heteroatoms’ normal valencies are not exceeded.
  • Keto substituents are not present on aromatic moieties.
  • “Stable compound” and “stable structure” are meant to indicate a compound that is sufficiently robust to survive isolation to a useful degree of purity from a reaction mixture, and formulation into an efficacious therapeutic agent. [041] When a bond to a substituent is shown to cross a bond connecting two atoms in a ring, then such substituent may be bonded to any carbon atom or heteroatom in the ring, provided that the carbon atom or heteroatom’s normal valency is not exceeded. Unless specified otherwise, it is assumed that the substituent replaces a hydrogen atom of the substituted atom.
  • hydroxy or “hydroxyl” includes groups with an -OH or -O-.
  • cyano refers to the group -CN.
  • halo or “halogen” refers to fluoro, chloro, bromo and iodo.
  • haloalkyl refers to a branched or unbranched alkyl substituted with one or more halogens.
  • a C 1-6 haloalkyl is an alkyl group of from one to six carbons wherein at least one H is substituted by a halogen.
  • haloalkyl include but are not limited to CFH 2 , CF 2 H, CF 3 , CH 2 CF 3 , CF 2 CF 3 , C(F)(CH 3 ) 2 , CH 2 CH 2 Br, CH(I)CH 2 F, and CH 2 Cl.
  • haloalkoxy refers to alkoxy structures that are substituted with one or more halo groups or with combinations thereof.
  • fluoroalkyl and “fluoroalkoxy” are haloalkyl and haloalkoxy groups, respectively, in which the halo is fluorine.
  • amino refers to the radical -NH2.
  • one or both hydrogen atoms of -NH 2 may be replaced with a different group, e.g., amino-C1-7alkyl.
  • compositions are described as having, including, or comprising specific components, it is contemplated that compositions also consist essentially of, or consist of, the recited components. Similarly, where methods or processes are described as having, including, or comprising specific process steps, the processes also consist essentially of, or consist of, the recited processing steps.
  • compounds of the present disclosure can be prepared in a variety of ways using commercially available starting materials, compounds known in the literature, or from readily prepared intermediates, by employing standard synthetic methods and procedures either known to those skilled in the art, or which will be apparent to the skilled artisan in light of the teachings herein.
  • Standard synthetic methods and procedures for the preparation of organic molecules and functional group transformations and manipulations can be obtained from the relevant scientific literature or from standard textbooks in the field. Although not limited to any one or several sources, classic texts such as Smith, M.
  • any description of a method of treatment includes use of the compounds to provide such treatment or prophylaxis as is described herein, as well as use of the compounds to prepare a medicament to treat or prevent such condition. It is to be understood that, unless otherwise stated, any description of a method of treatment includes use of the compounds to provide such treatment or prophylaxis as is described herein, as well as use of the compounds to prepare a medicament to treat such condition.
  • the treatment includes treatment of human or non-human animals including rodents and other disease models.
  • the terms “individual,” “patient,” or “subject” are used interchangeably and include any animal, including mammals, preferably mice, rats, other rodents, rabbits, dogs, cats, swine, cattle, sheep, horses, or primates, and most preferably humans.
  • the compounds of the disclosure can be administered to a mammal, such as a human, but can also be other mammals such as an animal in need of veterinary treatment, e.g., domestic animals (e.g., dogs, cats, and the like), farm animals (e.g., cows, sheep, pigs, horses, and the like) and laboratory animals (e.g., rats, mice, guinea pigs, and the like).
  • the term “treating” or “treat” includes any effect, e.g., lessening, reducing, modulating, or eliminating, that results in the improvement of the condition, disease, disorder and the like.
  • a compound of the present disclosure, or a pharmaceutically acceptable salt or solvate thereof can or may also be used to prevent a relevant disease, condition or disorder, or used to identify suitable candidates for such purposes.
  • the term “preventing,” “prevent,” or “protecting against” describes reducing or eliminating the onset of the symptoms or complications of such disease, condition or disorder.
  • the unit dosage form is any of a variety of forms, including, for example, a capsule, an IV bag, a tablet, a single pump on an aerosol inhaler or a vial.
  • the quantity of active ingredient (e.g., a formulation of the disclosed compound or salt, hydrate, solvate or isomer thereof) in a unit dose of composition is an effective amount and is varied according to the particular treatment involved.
  • active ingredient e.g., a formulation of the disclosed compound or salt, hydrate, solvate or isomer thereof
  • the dosage will also depend on the route of administration.
  • routes including oral, pulmonary, rectal, parenteral, transdermal, subcutaneous, intravenous, intramuscular, intraperitoneal, inhalational, buccal, sublingual, intrapleural, intrathecal, intranasal, and the like.
  • Dosage forms for the topical or transdermal administration of a compound of this disclosure include powders, sprays, ointments, pastes, creams, lotions, gels, solutions, patches and inhalants.
  • the active compound is mixed under sterile conditions with a pharmaceutically acceptable carrier, and with any preservatives, buffers, or propellants that are required.
  • the term “pharmaceutically acceptable” refers to those compounds, anions, cations, materials, compositions, carriers, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings and animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio.
  • pharmaceutically acceptable excipient means an excipient that is useful in preparing a pharmaceutical composition that is generally safe, non-toxic and neither biologically nor otherwise undesirable, and includes excipient that is acceptable for veterinary use as well as human pharmaceutical use.
  • a “pharmaceutically acceptable excipient” as used in the specification and claims includes both one and more than one such excipient.
  • routes of administration include parenteral, e.g., intravenous, intradermal, subcutaneous, oral (e.g., ingestion), inhalation, transdermal (topical), and transmucosal administration.
  • Solutions or suspensions used for parenteral, intradermal, or subcutaneous application can include the following components: a sterile diluent such as water for injection, saline solution, fixed oils, polyethylene glycols, glycerine, propylene glycol or other synthetic solvents; antibacterial agents such as benzyl alcohol or methyl parabens; antioxidants such as ascorbic acid or sodium bisulphite; chelating agents such as ethylenediaminetetraacetic acid; buffers such as acetates, citrates or phosphates, and agents for the adjustment of tonicity such as sodium chloride or dextrose.
  • the pH can be adjusted with acids or bases, such as hydrochloric acid or sodium hydroxide.
  • the parenteral preparation can be enclosed in ampoules, disposable syringes or multiple dose vials made of glass or plastic.
  • a compound or pharmaceutical composition of the disclosure can be administered to a subject in many of the well-known methods currently used for chemotherapeutic treatment.
  • a compound of the disclosure may be injected into the blood stream or body cavities or taken orally or applied through the skin with patches.
  • the dose chosen should be sufficient to constitute effective treatment but not so high as to cause unacceptable side effects.
  • the state of the disease condition e.g., a disease or disorder disclosed herein
  • the health of the subject should preferably be closely monitored during and for a reasonable period after treatment.
  • the term “therapeutically effective amount” means the amount of the subject compound that will elicit the biological or medical response of a tissue, system, animal or human that is being sought by the researcher, veterinarian, medical doctor or other clinician.
  • a therapeutically effective amount of a compound is the quantity required to achieve a desired therapeutic and/or prophylactic effect.
  • the therapeutically effective amount can be estimated initially either in cell culture assays, e.g., of neoplastic cells, or in animal models, usually rats, mice, rabbits, dogs, or pigs. The animal model may also be used to determine the appropriate concentration range and route of administration.
  • Therapeutic/prophylactic efficacy and toxicity may be determined by standard pharmaceutical procedures in cell cultures or experimental animals, e.g., ED 50 (the dose therapeutically effective in 50% of the population) and LD 50 (the dose lethal to 50% of the population).
  • the dose ratio between toxic and therapeutic effects is the therapeutic index, and it can be expressed as the ratio, LD 50 /ED 50 .
  • Pharmaceutical compositions that exhibit large therapeutic indices are preferred. The dosage may vary within this range depending upon the dosage form employed, sensitivity of the subject, and the route of administration. [069] Dosage and administration are adjusted to provide sufficient levels of the active agent(s) or to maintain the desired effect.
  • compositions containing active compounds of the present disclosure may be manufactured in a manner that is generally known, e.g., by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping, or lyophilising processes.
  • compositions may be formulated in a conventional manner using one or more pharmaceutically acceptable carriers comprising excipients and/or auxiliaries that facilitate processing of the active compounds into preparations that can be used pharmaceutically.
  • pharmaceutically acceptable carriers comprising excipients and/or auxiliaries that facilitate processing of the active compounds into preparations that can be used pharmaceutically.
  • the appropriate formulation is dependent upon the route of administration chosen.
  • Pharmaceutical compositions suitable for injectable use include sterile aqueous solutions (where water soluble) or dispersions and sterile powders for the extemporaneous preparation of sterile injectable solutions or dispersion.
  • suitable carriers include physiological saline, bacteriostatic water, Cremophor EL ⁇ (BASF, Parsippany, N.J.) or phosphate buffered saline (PBS).
  • the carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof.
  • the proper fluidity can be maintained, for example, by the use of a coating such as lecithin, by the maintenance of the required particle size in the case of dispersion and by the use of surfactants.
  • Prevention of the action of microorganisms can be achieved by various antibacterial and antifungal agents, for example, parabens, chlorobutanol, phenol, ascorbic acid, thimerosal, and the like.
  • isotonic agents for example, sugars, polyalcohols such as mannitol and sorbitol, and sodium chloride in the composition.
  • Prolonged absorption of the injectable compositions can be brought about by including in the composition an agent which delays absorption, for example, aluminum monostearate and gelatin.
  • Sterile injectable solutions can be prepared by incorporating the active compound in the required amount in an appropriate solvent with one or a combination of ingredients enumerated above, as required, followed by filtered sterilisation.
  • dispersions are prepared by incorporating the active compound into a sterile vehicle that contains a basic dispersion medium and the required other ingredients from those enumerated above.
  • methods of preparation are vacuum drying and freeze-drying that yields a powder of the active ingredient plus any additional desired ingredient from a previously sterile-filtered solution thereof.
  • Oral compositions generally include an inert diluent or an edible pharmaceutically acceptable carrier.
  • compositions can also be prepared using a fluid carrier for use as a mouthwash, wherein the compound in the fluid carrier is applied orally and swished and expectorated or swallowed.
  • Pharmaceutically compatible binding agents, and/or adjuvant materials can be included as part of the composition.
  • the tablets, pills, capsules, troches and the like can contain any of the following ingredients, or compounds of a similar nature: a binder such as microcrystalline cellulose, gum tragacanth or gelatin; an excipient such as starch or lactose, a disintegrating agent such as alginic acid, Primogel, or corn starch; a lubricant such as magnesium stearate or Sterotes; a glidant such as colloidal silicon dioxide; a sweetening agent such as sucrose or saccharin; or a flavoring agent such as peppermint, methyl salicylate, or orange flavoring.
  • a binder such as microcrystalline cellulose, gum tragacanth or gelatin
  • an excipient such as starch or lactose, a disintegrating agent such as alginic acid, Primogel, or corn starch
  • a lubricant such as magnesium stearate or Sterotes
  • a glidant such as colloidal silicon dioxide
  • the compounds are delivered in the form of an aerosol spray from pressured container or dispenser, which contains a suitable propellant, e.g., a gas such as carbon dioxide, or a nebuliser.
  • a suitable propellant e.g., a gas such as carbon dioxide, or a nebuliser.
  • Systemic administration can also be by transmucosal or transdermal means.
  • penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art, and include, for example, for transmucosal administration, detergents, bile salts, and fusidic acid derivatives.
  • Transmucosal administration can be accomplished through the use of nasal sprays or suppositories.
  • the active compounds are formulated into ointments, salves, gels, or creams as generally known in the art.
  • the active compounds can be prepared with pharmaceutically acceptable carriers that will protect the compound against rapid elimination from the body, such as a controlled release formulation, including implants and microencapsulated delivery systems.
  • a controlled release formulation including implants and microencapsulated delivery systems.
  • Biodegradable, biocompatible polymers can be used, such as ethylene vinyl acetate, polyanhydrides, polyglycolic acid, collagen, polyorthoesters, and polylactic acid. Methods for preparation of such formulations will be apparent to those skilled in the art.
  • the materials can also be obtained commercially from Alza Corporation and Nova Pharmaceuticals, Inc.
  • Liposomal suspensions can also be used as pharmaceutically acceptable carriers. These can be prepared according to methods known to those skilled in the art, for example, as described in U.S. Pat. No. 4,522,811. [077] It is especially advantageous to formulate oral or parenteral compositions in dosage unit form for ease of administration and uniformity of dosage.
  • Dosage unit form as used herein refers to physically discrete units suited as unitary dosages for the subject to be treated; each unit containing a predetermined quantity of active compound calculated to produce the desired therapeutic effect in association with the required pharmaceutical carrier.
  • the dosages of the pharmaceutical compositions used in accordance with the disclosure vary depending on the agent, the age, weight, and clinical condition of the recipient subject, and the experience and judgment of the clinician or practitioner administering the therapy, among other factors affecting the selected dosage. Generally, the dose should be sufficient to result in slowing, and preferably regressing, the symptoms of the disease or disorder disclosed herein and also preferably causing complete regression of the disease or disorder.
  • An effective amount of a pharmaceutical agent is that which provides an objectively identifiable improvement as noted by the clinician or other qualified observer. Improvement in survival and growth indicates regression.
  • the term “dosage effective manner” refers to amount of an active compound to produce the desired biological effect in a subject or cell.
  • the pharmaceutical compositions can be included in a container, pack, or dispenser together with instructions for administration.
  • the pharmaceutical compositions can be included in a container, pack, or dispenser together with instructions for administration.
  • the pharmaceutical compositions can be included in a container, pack, or dispenser together with instructions for administration.
  • the pharmaceutical compositions can be included in a container, pack, or dispenser together with instructions for administration.
  • the term “pharmaceutically acceptable salts” refer to derivatives of the compounds of the present disclosure wherein the parent compound is modified by making acid or base salts thereof.
  • Examples of pharmaceutically acceptable salts include, but are not limited to, mineral or organic acid salts of basic residues such as amines, alkali or organic salts of acidic residues such as carboxylic acids, and the like.
  • the pharmaceutically acceptable salts include the conventional non-toxic salts or the quaternary ammonium salts of the parent compound formed, for example, from non-toxic inorganic or organic acids.
  • such conventional non-toxic salts include, but are not limited to, those derived from inorganic and organic acids selected from 2-acetoxybenzoic, 2-hydroxyethane sulphonic, acetic, ascorbic, benzene sulphonic, benzoic, bicarbonic, carbonic, citric, edetic, ethane disulphonic, 1,2-ethane sulphonic, fumaric, glucoheptonic, gluconic, glutamic, glycolic, glycollyarsanilic, hexylresorcinic, hydrabamic, hydrobromic, hydrochloric, hydroiodic, hydroxymaleic, hydroxynaphthoic, isethionic, lactic, lactobionic, lauryl sulphonic, maleic, malic, mandelic, methane sulphonic, napsylic, nitric, oxalic, pamoic, pantothenic, phenylacetic, phosphoric, polygalactur
  • the pharmaceutically acceptable salt is a sodium salt, a potassium salt, a calcium salt, a magnesium salt, a diethylamine salt, a choline salt, a meglumine salt, a benzathine salt, a tromethamine salt, an ammonia salt, an arginine salt, or a lysine salt.
  • salts include hexanoic acid, cyclopentane propionic acid, pyruvic acid, malonic acid, 3-(4-hydroxybenzoyl)benzoic acid, cinnamic acid, 4-chlorobenzenesulphonic acid, 2-naphthalenesulphonic acid, 4- toluenesulphonic acid, camphorsulphonic acid, 4-methylbicyclo-[2.2.2]-oct-2-ene-1- carboxylic acid, 3-phenylpropionic acid, trimethylacetic acid, tertiary butylacetic acid, muconic acid, and the like.
  • the present disclosure also encompasses salts formed when an acidic proton present in the parent compound either is replaced by a metal ion, e.g., an alkali metal ion, an alkaline earth ion, or an aluminum ion; or coordinates with an organic base such as ethanolamine, diethanolamine, triethanolamine, tromethamine, N-methylglucamine, and the like.
  • a metal ion e.g., an alkali metal ion, an alkaline earth ion, or an aluminum ion
  • organic base such as ethanolamine, diethanolamine, triethanolamine, tromethamine, N-methylglucamine, and the like.
  • the ratio of the compound to the cation or anion of the salt can be 1:1, or any ratio other than 1:1, e.g., 3:1, 2:1, 1:2, or 1:3.
  • all references to pharmaceutically acceptable salts include solvent addition forms (solvates) as defined herein, of the same salt.
  • the compounds, or pharmaceutically acceptable salts thereof are administered orally, nasally, transdermally, pulmonary, inhalationally, buccally, sublingually, intraperitoneally, subcutaneously, intramuscularly, intravenously, rectally, intrapleurally, intrathecally and parenterally.
  • the compound is administered orally.
  • a salt for example, can be formed between an anion and a positively charged group (e.g., amino) on a substituted compound disclosed herein.
  • Suitable anions include chloride, bromide, iodide, sulphate, bisulphate, sulphamate, nitrate, phosphate, citrate, methanesulphonate, trifluoroacetate, glutamate, glucuronate, glutarate, malate, maleate, succinate, fumarate, tartrate, tosylate, salicylate, lactate, naphthalenesulphonate, and acetate (e.g., trifluoroacetate).
  • the compounds of the present disclosure for example, the salts of the compounds, can exist in either hydrated or unhydrated (the anhydrous) form or as solvates with other solvent molecules.
  • Nonlimiting examples of hydrates include monohydrates, dihydrates, etc.
  • Nonlimiting examples of solvates include ethanol solvates, acetone solvates, etc.
  • the term “solvate” means solvent addition forms that contain either stoichiometric or non-stoichiometric amounts of solvent. Some compounds have a tendency to trap a fixed molar ratio of solvent molecules in the crystalline solid state, thus forming a solvate. If the solvent is water the solvate formed is a hydrate; and if the solvent is alcohol, the solvate formed is an alcoholate. Hydrates are formed by the combination of one or more molecules of water with one molecule of the substance in which the water retains its molecular state as H 2 O.
  • the term “derivative” refers to compounds that have a common core structure and are substituted with various groups as described herein.
  • certain compounds of any one of the Formulae disclosed herein may exist in solvated as well as unsolvated forms such as, for example, hydrated forms.
  • a suitable pharmaceutically acceptable solvate is, for example, a hydrate such as hemi-hydrate, a mono-hydrate, a di-hydrate or a tri-hydrate.
  • Compounds of any one of the Formulae disclosed herein may exist in a number of different tautomeric forms and references to compounds of formula (I), (Ia), (Ib),(Ic), and (Id) include all such forms.
  • tautomeric forms include keto-, enol-, and enolate-forms, as in, for example, the following tautomeric pairs: keto/enol (illustrated below), imine/enamine, amide/imino alcohol, amidine/amidine, nitroso/ oxime, thioketone/enethiol, and nitro/aci-nitro.
  • N-oxides Compounds of any one of the Formulae disclosed herein containing an amine function may also form N-oxides.
  • a reference herein to a compound of formula (I), (Ia), (Ib), (Ic), and (Id) that contains an amine function also includes the N-oxide.
  • a compound contains several amine functions, one or more than one nitrogen atom may be oxidised to form an N- oxide.
  • Particular examples of N-oxides are the N-oxides of a tertiary amine or a nitrogen atom of a nitrogen-containing heterocycle.
  • N-oxides can be formed by treatment of the corresponding amine with an oxidising agent such as hydrogen peroxide or a peracid (e.g. a peroxycarboxylic acid), see for example Advanced Organic Chemistry, by Jerry March, 4th Edition, Wiley Interscience, pages. More particularly, N-oxides can be made by the procedure of L. W. Deady (Syn. Comm. 1977, 7, 509-514) in which the amine compound is reacted with meta-chloroperoxybenzoic acid (mCPBA), for example, in an inert solvent such as dichloromethane.
  • mCPBA meta-chloroperoxybenzoic acid
  • the compounds of any one of the Formulae disclosed herein may be administered in the form of a prodrug which is broken down in the human or animal body to release a compound of the disclosure.
  • a prodrug may be used to alter the physical properties and/or the pharmacokinetic properties of a compound of the disclosure.
  • a prodrug can be formed when the compound of the disclosure contains a suitable group or substituent to which a property-modifying group can be attached. Examples of prodrugs include derivatives containing in vivo cleavable alkyl or acyl substitutents at the ester or amide group in any one of the Formulae disclosed herein.
  • the term “isomerism” means compounds that have identical molecular formulae but differ in the sequence of bonding of their atoms or in the arrangement of their atoms in space. Isomers that differ in the arrangement of their atoms in space are termed “stereoisomers.” Stereoisomers that are not mirror images of one another are termed “diastereoisomers,” and stereoisomers that are non-superimposable mirror images of each other are termed “enantiomers” or sometimes optical isomers.
  • racemic mixture A mixture containing equal amounts of individual enantiomeric forms of opposite chirality is termed a “racemic mixture.”
  • chiral centre refers to a carbon atom bonded to four nonidentical substituents.
  • chiral isomer means a compound with at least one chiral centre. Compounds with more than one chiral centre may exist either as an individual diastereomer or as a mixture of diastereomers, termed “diastereomeric mixture.” When one chiral centre is present, a stereoisomer may be characterised by the absolute configuration (R or S) of that chiral centre.
  • Absolute configuration refers to the arrangement in space of the substituents attached to the chiral centre.
  • the substituents attached to the chiral centre under consideration are ranked in accordance with the Sequence Rule of Cahn, Ingold and Prelog. (Cahn et al., Angew. Chem. Inter. Edit. 1966, 5, 385; errata 511; Cahn et al., Angew. Chem. 1966, 78, 413; Cahn and Ingold, J. Chem. Soc. 1951 (London), 612; Cahn et al., Experientia 1956, 12, 81; Cahn, J. Chem. Educ. 1964, 41, 116).
  • the term “geometric isomer” means the diastereomers that owe their existence to hindered rotation about double bonds or a cycloalkyl linker (e.g., 1,3- cyclobutyl). These configurations are differentiated in their names by the prefixes cis and trans, or Z and E, which indicate that the groups are on the same or opposite side of the double bond in the molecule according to the Cahn-Ingold-Prelog rules. [098] It is to be understood that the compounds of the present disclosure may be depicted as different chiral isomers or geometric isomers.
  • Atropic isomers owe their existence to a restricted rotation caused by hindrance of rotation of large groups about a central bond. Such atropic isomers typically exist as a mixture, however as a result of recent advances in chromatography techniques, it has been possible to separate mixtures of two atropic isomers in select cases.
  • the term “tautomer” is one of two or more structural isomers that exist in equilibrium and is readily converted from one isomeric form to another. This conversion results in the formal migration of a hydrogen atom accompanied by a switch of adjacent conjugated double bonds. Tautomers exist as a mixture of a tautomeric set in solution. In solutions where tautomerisation is possible, a chemical equilibrium of the tautomers will be reached.
  • tautomerism The concept of tautomers that are interconvertible by tautomerisations is called tautomerism. Of the various types of tautomerism that are possible, two are commonly observed. In keto-enol tautomerism a simultaneous shift of electrons and a hydrogen atom occurs. Ring-chain tautomerism arises as a result of the aldehyde group (-CHO) in a sugar chain molecule reacting with one of the hydroxy groups (-OH) in the same molecule to give it a cyclic (ring-shaped) form as exhibited by glucose.
  • -CHO aldehyde group
  • -OH hydroxy groups
  • stereoisomers that are not mirror images of one another are termed “diastereomers” and those that are non-superimposable mirror images of each other are termed “enantiomers”.
  • enantiomers When a compound has an asymmetric centre, for example, it is bonded to four different groups, a pair of enantiomers is possible.
  • An enantiomer can be characterised by the absolute configuration of its asymmetric centre and is described by the R- and S-sequencing rules of Cahn and Prelog, or by the manner in which the molecule rotates the plane of polarised light and designated as dextrorotatory or levorotatory (i.e., as (+) or (-)-isomers respectively).
  • a chiral compound can exist as either individual enantiomer or as a mixture thereof.
  • a mixture containing equal proportions of the enantiomers is called a “racemic mixture”.
  • the compounds of this disclosure may possess one or more asymmetric centres; such compounds can therefore be produced as individual (R)- or (S)-stereoisomers or as mixtures thereof. Unless indicated otherwise, the description or naming of a particular compound in the specification and claims is intended to include both individual enantiomers and mixtures, racemic or otherwise, thereof.
  • the methods for the determination of stereochemistry and the separation of stereoisomers are well-known in the art (see discussion in Chapter 4 of “Advanced Organic Chemistry”, 4th edition J.
  • the present disclosure includes those compounds of any one of the Formulae disclosed herein as defined hereinbefore when made available by organic synthesis and when made available within the human or animal body by way of cleavage of a prodrug thereof.
  • the present disclosure includes those compounds of any one of the Formulae disclosed herein that are produced by organic synthetic means and also such compounds that are produced in the human or animal body by way of metabolism of a precursor compound, that is a compound of any one of the Formulae disclosed herein may be a synthetically-produced compound or a metabolically-produced compound.
  • a suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein is one that is based on reasonable medical judgment as being suitable for administration to the subject without undesirable pharmacological activities and without undue toxicity.
  • Various forms of prodrug have been described, for example in the following documents: a) Methods in Enzymology, Vol. 42, p. 309-396, edited by K.
  • a suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein that possesses a hydroxy group is, for example, an in vivo cleavable ester or ether thereof.
  • An in vivo cleavable ester or ether of a compound of any one of the Formulae disclosed herein containing a hydroxy group is, for example, a pharmaceutically acceptable ester or ether which is cleaved in the subject to produce the parent hydroxy compound.
  • Suitable pharmaceutically acceptable ester forming groups for a hydroxy group include inorganic esters such as phosphate esters (including phosphoramidic cyclic esters).
  • ester forming groups for a hydroxy group include C 1 -C 10 alkanoyl groups such as acetyl, benzoyl, phenylacetyl and substituted benzoyl and phenylacetyl groups, C 1 -C 10 alkoxycarbonyl groups such as ethoxycarbonyl, N,N-(C 1 -C 6 alkyl) 2 carbamoyl, 2-dialkylaminoacetyl and 2-carboxyacetyl groups.
  • C 1 -C 10 alkanoyl groups such as acetyl, benzoyl, phenylacetyl and substituted benzoyl and phenylacetyl groups
  • C 1 -C 10 alkoxycarbonyl groups such as ethoxycarbonyl, N,N-(C 1 -C 6 alkyl) 2 carbamoyl, 2-dialkylaminoacetyl and 2-carboxyacetyl groups.
  • Suitable pharmaceutically acceptable ether forming groups for a hydroxy group include ⁇ -acyloxyalkyl groups such as acetoxymethyl and pivaloyloxymethyl groups.
  • a suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein that possesses a carboxy group is, for example, an in vivo cleavable amide thereof, for example an amide formed with an amine such as ammonia, a C 1- 4 alkylamine such as methylamine, a (C 1 -C 4 alkyl) 2 amine such as dimethylamine, N-ethyl-N- methylamine or diethylamine, a C 1 -C 4 alkoxy-C 2 -C 4 alkylamine such as 2-methoxyethylamine, a phenyl-C 1 -C 4 alkylamine such as benzylamine and amino acids such as glycine or an ester thereof.
  • an amine such as ammonia
  • a C 1- 4 alkylamine such as methylamine
  • a (C 1 -C 4 alkyl) 2 amine such as dimethylamine, N-ethyl-N-
  • a suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein that possesses an amino group is, for example, an in vivo cleavable amide derivative thereof.
  • Suitable pharmaceutically acceptable amides from an amino group include, for example an amide formed with C 1 -C 10 alkanoyl groups such as an acetyl, benzoyl, phenylacetyl and substituted benzoyl and phenylacetyl groups.
  • ring substituents on the phenylacetyl and benzoyl groups include aminomethyl, N- alkylaminomethyl, N,N-dialkylaminomethyl,morpholinomethyl,piperazin-1-ylmethyl and 4- (C 1 -C 4 alkyl)piperazin-1-ylmethyl.
  • the dosage regimen utilising the compounds is selected in accordance with a variety of factors including type, species, age, weight, sex and medical condition of the subject; the severity of the condition to be treated; the route of administration; the renal and hepatic function of the subject; and the particular compound or salt thereof employed. An ordinarily skilled physician or veterinarian can readily determine and prescribe the effective amount of the drug required to prevent, counter, or arrest the progress of the condition.
  • the compounds described herein, and the pharmaceutically acceptable salts thereof are used in pharmaceutical preparations in combination with a pharmaceutically acceptable carrier or diluent.
  • suitable pharmaceutically acceptable carriers include inert solid fillers or diluents and sterile aqueous or organic solutions. The compounds will be present in such pharmaceutical compositions in amounts sufficient to provide the desired dosage amount in the range described herein.
  • Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur
  • Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur
  • each R 1 is independently selected from halogen, -CN, C 1-6 alkyl, C 1-6 haloalkyl, C 1-6 alkoxy, C 3- 6 cycloalkyl, and 5-8 memebered heteroaryl
  • each R 2 is independently selected from halogen and C 1-6 alkyl
  • R 3 is selected from H and C 1-6 alkyl
  • each R a is independently selected from the group consisting of halogen, -OH, C 1-6 alkyl, C 1- 6 haloalkyl, oxo, C 3-6 cycloalkyl, -C
  • Ring A is an optionally substituted 5-6 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. In some embodiments, Ring A is an optionally substituted 5-6 membered heterocyclyl comprising 1-2 nitrogen atoms. [0119] In some embodiments, Ring A is selected from optionally substituted piperidinyl and optionally substituted pyrrolidinyl. In some embodiments, Ring A is optionally substituted piperazinyl. In some embodiments, Ring A is optionally substituted piperidinyl.
  • Ring A is optionally substituted pyrrolidinyl.
  • each R a is independently selected from C 1-6 alkyl and -N(R c R d ). In some embodiments, each R a is independently C 1-6 alkyl. In certain embodiments, each R a is methyl. In some embodiments, each R a is independently -N(R c R d ). In some embodiments, each R c is methyl. In some embodiments, each R d is H. In certain embodiments, each R c is methyl and each R d is H. In certain embodiments, each R a is -N(H)CH 3 .
  • each R a is independently selected from methyl and -N(H)CH 3 .
  • p is 1 or 2.
  • p is 1.
  • p is 2.
  • the portion of the compound represented is selected from the group consisting [0123] In some embodiments, the portion of the compound represented [0125] In some embodiments, the portion of the compound represented is selected from the group consisting of , , , , [0126] In some embodiments, the portion of the compound represented is selected from the group consisting
  • the compound is a compound of formula (Ia),
  • each R a is -N(H)CH 3 .
  • p is 1.
  • the compound is a compound formula (Ic), or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein.
  • the compound is a compound formula (Id), or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein.
  • p is 0.
  • Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur.
  • Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-2 heteratoms independently selected from nitrogen and oxygen.
  • Ring B is selected from the group consisting of optionally substituted indazolyl, optionally substituted imidazo[1,2-a]pyridyl, and optionally substituted 2,7a-dihyrdobenzo[d]oxazolyl.
  • each R b is independently selected from the group consisting of halogen, C 1-6 alkyl, C 1-6 haloalkyl, and C 1-6 alkoxy.
  • each R b is independently selected from the group consisting of fluoro, methyl, methoxy, ethoxy, -CHF 2 , and -CF 3 .
  • R b is halogen.
  • R b is C 1-3 alkyl.
  • R b is C 1-3 haloalkyl.
  • R b is C 1-3 alkoxy.
  • q is 2 or 3.
  • q is 2.
  • q is 3.
  • the portion of the compound represented by [0142] In some embodiments, the portion of the compound represented by [0143] In some embodiments, the portion of the compound represented by [0144] In some embodiments, the portion of the compound represented by [0145] In some embodiments, the portion of the compound represented by [0146] In some embodiments, the portion of the compound represented by F N N , O N N N N , F N N N , N N , F N N N , F F O F N N N N N O , O , O , S , S , F O O N N N N N N N N N N N N , , , , , , , ,
  • variable groups together form an alkylene
  • This ring can be cycloalkyl or heterocyclyl depending on the attachment point of the variables, but the variable groups themselves are alkylene and thus contain no heteroatoms of their own.
  • the compound is selected from the compounds described in Table 1 and pharmaceutically acceptable salts thereof.
  • the compound is selected from the compounds described in Table 1, or from the disclosure.
  • the compound is selected from the compounds described in Table 1.
  • the compound is a therapeutically active substance.
  • the compound is a small molecule splicing modulator.
  • the said group encompasses the first occurring and broadest definition as well as each and all of the particular definitions for that group.
  • the various functional groups and substituents making up the compounds of formulae (I), (Ia), (Ib), (Ic), and (Id) are typically chosen such that the molecular weight of the compound does not exceed 1000 daltons.
  • the molecular weight of the compound will be less than 900, for example less than 800, or less than 750, or less than 700, or less than 650 daltons. More conveniently, the molecular weight is less than 600 and, for example, is 550 daltons or less.
  • the compounds of any one of formulae (I), (Ia), (Ib), (Ic), and (Id) disclosed herein and any pharmaceutically acceptable salts thereof comprise stereoisomers and mixtures of stereoisomers of all isomeric forms of said compounds.
  • the compounds of formulae (I), (Ia), (Ib), (Ic), and (Id) described herein include the compounds themselves, as well as their salts, and their solvates, if applicable.
  • the in vivo effects of a compound of any one of formulae (I), (Ia), (Ib), (Ic), and (Id) disclosed herein may be exerted in part by one or more metabolites that are formed within the human or animal body after administration of a compound of any one of formulae (I), (Ia), (Ib), (Ic), and (Id) disclosed herein.
  • the in vivo effects of a compound of any one of the Formulae disclosed herein may also be exerted by way of metabolism of a precursor compound (a prodrug).
  • the present disclosure excludes any individual compounds not possessing the biological activity defined herein.
  • compounds described herein may also comprise one or more isotopic substitutions.
  • hydrogen may be 2 H (D or deuterium) or 3 H (T or tritium); carbon may be, for example, 13 C or 14 C; oxygen may be, for example, 18 O; nitrogen may be, for example, 15 N, and the like.
  • a particular isotope (e.g., 3 H, 13 C, 14 C, 18 O, or 15 N) can represent at least 1%, at least 5%, at least 10%, at least 15%, at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 99%, or at least 99.9% of the total isotopic abundance of an element that occupies a specific site of the compound.
  • the present disclosure provides a method of preparing a compound of the present disclosure (e.g., a compound of formula (I), (Ia), (Ib), or (Ic)).
  • a method of preparing a compound comprising one or more steps as described herein.
  • the present disclosure provides a compound obtainable by, or obtained by, or directly obtained by a method for preparing a compound as described herein (e.g., a compound of formula (I), (Ia), (Ib), or (Ic)).
  • the present disclosure provides an intermediate as described herein, being suitable for use in a method for preparing a compound as described herein (e.g., a compound of formula (I), (Ia), (Ib), or (Ic)).
  • a compound as described herein e.g., a compound of formula (I), (Ia), (Ib), or (Ic)
  • the compounds of the present disclosure e.g., compounds of formula (I), (Ia), (Ib), or (Ic)
  • Protecting groups may be removed by any convenient method described in the literature or known to the skilled chemist as appropriate for the removal of the protecting group in question, such methods being chosen so as to effect removal of the protecting group with the minimum disturbance of groups elsewhere in the molecule.
  • reactants include, for example, groups such as amino, carboxy or hydroxy it may be desirable to protect the group in some of the reactions mentioned herein.
  • a suitable protecting group for an amino or alkylamino group is, for example, an acyl group, for example an alkanoyl group such as acetyl, an alkoxycarbonyl group, for example a methoxycarbonyl, ethoxycarbonyl, or t-butoxycarbonyl group, an arylmethoxycarbonyl group, for example benzyloxycarbonyl, or an aroyl group, for example benzoyl.
  • the deprotection conditions for the above protecting groups necessarily vary with the choice of protecting group.
  • an acyl group such as an alkanoyl or alkoxycarbonyl group or an aroyl group may be removed by, for example, hydrolysis with a suitable base such as an alkali metal hydroxide, for example lithium or sodium hydroxide.
  • a suitable base such as an alkali metal hydroxide, for example lithium or sodium hydroxide.
  • an acyl group such as a tert-butoxycarbonyl group may be removed, for example, by treatment with a suitable acid as hydrochloric, sulphuric or phosphoric acid or trifluoroacetic acid and an arylmethoxycarbonyl group such as a benzyloxycarbonyl group may be removed, for example, by hydrogenation over a catalyst such as palladium on carbon, or by treatment with a Lewis acid for example boron tris(trifluoroacetate).
  • a suitable alternative protecting group for a primary amino group is, for example, a phthaloyl group which may be removed by treatment with an alkylamine, for example dimethylaminopropylamine, or with hydrazine.
  • an arylmethyl group such as a benzyl group may be removed, for example, by hydrogenation over a catalyst such as palladium on carbon.
  • a suitable protecting group for a carboxy group is, for example, an esterifying group, for example a methyl or an ethyl group which may be removed, for example, by hydrolysis with a base such as sodium hydroxide, or for example a tert-butyl group which may be removed, for example, by treatment with an acid, for example an organic acid such as trifluoroacetic acid, or for example a benzyl group which may be removed, for example, by hydrogenation over a catalyst such as palladium on carbon.
  • the processes may then further comprise the additional steps of: (i) removing any protecting groups present; (ii) converting the compound of a formula (I),(Ia), (Ib), (Ic), or (Id) into another compound of formula (I), (Ia), (Ib), (Ic), or (Id) ; and/or (iii) forming a pharmaceutically acceptable salt thereof.
  • the resultant compounds of formula (I), (Ia), (Ib), (Ic), or (Id) can be isolated and purified using techniques well known in the art.
  • the reaction of the compounds is carried out in the presence of a suitable solvent, which is preferably inert under the respective reaction conditions.
  • suitable solvents comprise but are not limited to hydrocarbons, such as hexane, petroleum ether, benzene, toluene or xylene; chlorinated hydrocarbons, such as trichlorethylene, 1,2- dichloroethane, tetrachloromethane, chloroform or dichloromethane; alcohols, such as methanol, ethanol, isopropanol, n-propanol, n-butanol or tert-butanol; ethers, such as diethyl ether, diisopropyl ether, tetrahydrofuran (THF), 2-methyltetrahydrofuran, cyclopentylmethyl ether (CPME), methyl tert-butyl ether (MTBE) or dioxane; glycol ethers,
  • reaction temperature is suitably between about -100 °C and 300 °C, depending on the reaction step and the conditions used.
  • Reaction times are generally in the range between a fraction of a minute and several days, depending on the reactivity of the respective compounds and the respective reaction conditions. Suitable reaction times are readily determinable by methods known in the art, for example reaction monitoring. Based on the reaction temperatures given above, suitable reaction times generally lie in the range between 10 minutes and 48 hours.
  • additional compounds of the present disclosure e.g., compounds of formula (I), (Ia), (Ib), or (Ic) can be readily prepared.
  • some of the compounds of the present disclosure can readily be synthesised by reacting other compounds of the present disclosure under suitable conditions, for instance, by converting one particular functional group being present in a compound of the present disclosure, or a suitable precursor molecule thereof, into another one by applying standard synthetic methods, like reduction, oxidation, addition or substitution reactions; those methods are well known to the skilled person.
  • the skilled person will apply – whenever necessary or useful – synthetic protecting (or protective) groups; suitable protecting groups as well as methods for introducing and removing them are well-known to the person skilled in the art of chemical synthesis and are described, in more detail, in, e.g., P.G.M. Wuts, T.W.
  • compositions [0180] In some aspects, the present disclosure provides a pharmaceutical composition comprising a compound of the present disclosure as an active ingredient.
  • the present disclosure provides a pharmaceutical composition comprising at least one compound of each of the formulae described herein, or a pharmaceutically acceptable salt or solvate thereof, and one or more pharmaceutically acceptable carriers or excipients.
  • the present disclosure provides a pharmaceutical composition comprising at least one compound selected from Table 1, or from the disclosure.
  • the present disclosure provides a pharmaceutical composition comprising at least one compound selected from Table 1. [0181]
  • the term “composition” is intended to encompass a product comprising the specified ingredients in the specified amounts, as well as any product which results, directly or indirectly, from combination of the specified ingredients in the specified amounts.
  • the compounds of present disclosure can be formulated for oral administration in forms such as tablets, capsules (each of which includes sustained release or timed release formulations), pills, powders, granules, elixirs, tinctures, suspensions, syrups and emulsions.
  • the compounds of present disclosure can also be formulated for intravenous (bolus or in- fusion), intraperitoneal, topical, subcutaneous, intramuscular or transdermal (e.g., patch) administration, all using forms well known to those of ordinary skill in the pharmaceutical arts.
  • the formulation of the present disclosure may be in the form of an aqueous solution comprising an aqueous vehicle.
  • the aqueous vehicle component may comprise water and at least one pharmaceutically acceptable excipient.
  • Suitable acceptable excipients include those selected from the group consisting of a solubility enhancing agent, chelating agent, preservative, tonicity agent, viscosity/suspending agent, buffer, and pH modifying agent, and a mixture thereof. [0184] Any suitable solubility enhancing agent can be used.
  • solubility enhancing agent examples include cyclodextrin, such as those selected from the group consisting of hydroxypropyl- ⁇ -cyclodextrin, methyl- ⁇ -cyclodextrin, randomly methylated- ⁇ -cyclodextrin, ethylated- ⁇ -cyclodextrin, triacetyl- ⁇ -cyclodextrin, peracetylated- ⁇ -cyclodextrin, carboxymethyl- ⁇ -cyclodextrin, hydroxyethyl- ⁇ -cyclodextrin, 2-hydroxy-3- (trimethylammonio)propyl- ⁇ -cyclodextrin, glucosyl- ⁇ -cyclodextrin, sulphated ⁇ -cyclodextrin (S- ⁇ -CD), maltosyl- ⁇ -cyclodextrin, ⁇ -cyclodextrin sulphobutyl ether, branched- ⁇ - cyclodextrin, hydroxypropyl
  • Any suitable chelating agent can be used.
  • a suitable chelating agent include those selected from the group consisting of ethylenediaminetetraacetic acid and metal salts thereof, disodium edetate, trisodium edetate, and tetrasodium edetate, and mixtures thereof.
  • Any suitable preservative can be used.
  • Examples of a preservative include those selected from the group consisting of quaternary ammonium salts such as benzalkonium halides (preferably benzalkonium chloride), chlorhexidine gluconate, benzethonium chloride, cetyl pyridinium chloride, benzyl bromide, phenylmercury nitrate, phenylmercury acetate, phenylmercury neodecanoate, merthiolate, methylparaben, propylparaben, sorbic acid, potassium sorbate, sodium benzoate, sodium propionate, ethyl p-hydroxybenzoate, propylaminopropyl biguanide, and butyl-p-hydroxybenzoate, and sorbic acid, and mixtures thereof.
  • quaternary ammonium salts such as benzalkonium halides (preferably benzalkonium chloride), chlorhexidine gluconate, benzethon
  • the aqueous vehicle may also include a tonicity agent to adjust the tonicity (osmotic pressure).
  • the tonicity agent can be selected from the group consisting of a glycol (such as propylene glycol, diethylene glycol, triethylene glycol), glycerol, dextrose, glycerin, mannitol, potassium chloride, and sodium chloride, and a mixture thereof.
  • the aqueous vehicle may also contain a viscosity/suspending agent.
  • Suitable viscosity/suspending agents include those selected from the group consisting of cellulose derivatives, such as methyl cellulose, ethyl cellulose, hydroxyethylcellulose, polyethylene glycols (such as polyethylene glycol 300, polyethylene glycol 400), carboxymethyl cellulose, hydroxypropylmethyl cellulose, and cross-linked acrylic acid polymers (carbomers), such as polymers of acrylic acid cross-linked with polyalkenyl ethers or divinyl glycol (Carbopols - such as Carbopol 934, Carbopol 934P, Carbopol 971, Carbopol 974 and Carbopol 974P), and a mixture thereof.
  • cellulose derivatives such as methyl cellulose, ethyl cellulose, hydroxyethylcellulose
  • polyethylene glycols such as polyethylene glycol 300, polyethylene glycol 400
  • carboxymethyl cellulose such as polyethylene glycol 300, polyethylene glycol 400
  • carboxymethyl cellulose such as polyethylene
  • the formulation may contain a pH modifying agent.
  • the pH modifying agent is typically a mineral acid or metal hydroxide base, selected from potassium hydroxide, sodium hydroxide, and hydrochloric acid, and mixtures thereof, and preferably sodium hydroxide and/or hydrochloric acid.
  • the aqueous vehicle may also contain a buffering agent to stabilise the pH.
  • the buffer is selected from the group consisting of a phosphate buffer (such as sodium dihydrogen phosphate and disodium hydrogen phosphate), a borate buffer (such as boric acid, or salts thereof including disodium tetraborate), a citrate buffer (such as citric acid, or salts thereof including sodium citrate), and ⁇ -aminocaproic acid, and mixtures thereof.
  • the formulation may further comprise a wetting agent.
  • Suitable classes of wetting agents include those selected from the group consisting of polyoxypropylene- polyoxyethylene block copolymers (poloxamers), polyethoxylated ethers of castor oils, polyoxyethylenated sorbitan esters (polysorbates), polymers of oxyethylated octyl phenol (Tyloxapol), polyoxyl 40 stearate, fatty acid glycol esters, fatty acid glyceryl esters, sucrose fatty esters, and polyoxyethylene fatty esters, and mixtures thereof.
  • composition which comprises a compound of the disclosure as defined hereinbefore, or a pharmaceutically acceptable salt, hydrate or solvate thereof, in association with a pharmaceutically acceptable diluent or carrier.
  • compositions of the disclosure may be in a form suitable for oral use (for example as tablets, lozenges, hard or soft capsules, aqueous or oily suspensions, emulsions, dispersible powders or granules, syrups or elixirs), for topical use (for example as creams, ointments, gels, or aqueous or oily solutions or suspensions), for administration by inhalation (for example as a finely divided powder or a liquid aerosol), for administration by insufflation (for example as a finely divided powder) or for parenteral administration (for example as a sterile aqueous or oily solution for intravenous, subcutaneous, intramuscular, intraperitoneal or intramuscular dosing or as a suppository for rectal dosing).
  • oral use for example as tablets, lozenges, hard or soft capsules, aqueous or oily suspensions, emulsions, dispersible powders or granules, syrups or
  • compositions of the disclosure may be obtained by conventional procedures using conventional pharmaceutical excipients, well known in the art.
  • compositions intended for oral use may contain, for example, one or more colouring, sweetening, flavouring and/or preservative agents.
  • An effective amount of a compound of the present disclosure for use in therapy is an amount sufficient to treat or prevent a disease or disorder referred to herein, slow its progression and/or reduce the symptoms associated with the condition.
  • An effective amount of a compound of the present disclosure for use in therapy is an amount sufficient to treat a disease or disorder referred to herein, slow its progression and/or reduce the symptoms associated with the condition.
  • the size of the dose for therapeutic or prophylactic purposes of a compound of Formula (I) or (II) will naturally vary according to the nature and severity of the conditions, the age and sex of the animal or subject and the route of administration, according to well- known principles of medicine.
  • Methods of Use Provided herein is a method of treating a a disorder related to a nucleotide repeat expansion in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition described herein.
  • the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CNN, ANN, TNN, and GNN, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C).
  • A adenine
  • T thymine
  • G guanine
  • C cytosine
  • the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CAG, CAG/CTG, GCG, GCN, CGG, CCG, CCCCGCCCCGCG, GCA, GGGGCC, CTG, GAA, ATTCT, TGGAA, GGCCTG, AAGGG, CCCTCT, ATTTT/ATTTC, and CCCTCT, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C).
  • A adenine
  • T thymine
  • G guanine
  • C cytosine
  • the nucleotide repeat expansion comprises a trinucleotide sequence repeated two or more times, wherein the trinucleotide sequence is selected from the group consisting of CAG, CTG, CGG, and GCN.
  • the disease is Huntington’s disease.
  • a method of treating a disease in a subject in need thereof comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition disclosed herein, wherein the disease is Huntington’s disease.
  • the disease is myotonic dystrophy 1.
  • a method of treating a disease in a subject in need thereof comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition disclosed herein, wherein the disease is myotonic dystrophy 1.
  • the disease is selected from the group consisting of FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), FRAXE (Fragile XE mental retardation).
  • FRAXA Fragile X syndrome
  • FXTAS Fragile X-associated tremor/ataxia syndrome
  • FRAXE Fragile XE mental retardation.
  • the compounds of the disclosure e.g., compounds of formula (I), (Ia), (Ib), or (Ic)
  • pharmaceutical compositions comprising these compounds may be administered to a subject by any convenient route of administration, whether systemically/ peripherally or topically (i.e., at the site of desired action).
  • Routes of administration include, but are not limited to, oral (e.g.
  • transdermal including, e.g., by a patch, plaster, etc.
  • transmucosal including, e.g., by a patch, plaster, etc.
  • intranasal e.g., by nasal spray
  • ocular e.g., by eye drops
  • pulmonary e.g., by inhalation or insufflation therapy using, e.g., via an aerosol, e.g., through the mouth or nose
  • rectal e.g., by suppository or enema
  • vaginal e.g., by pessary
  • parenteral for example, by injection, including subcutaneous, intradermal, intramuscular, intravenous, intra-arterial, intracardiac, intrathecal, intraspinal, intracapsular, subcapsular, intraorbital, intraperitoneal, intratracheal, subcuticular, intraarticular, subarachnoid, and intrasternal; by implant of
  • a compound of formula (I), or a pharmaceutically acceptable salt thereof wherein Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; each R 1 is independently selected from halogen and C 1-6 alkyl; each R 2 is independently selected from halogen and C 1-6 alkyl; each R a is independently selected from the group consisting of halogen, C 1-6 alkyl, C 1- 6 haloalkyl, and -N(R c R d ), or two R a attached to the same carbon atom, together with carbon atom to which they are attached, combine to form a C 3-6 cycloalkyl; each R b is independently selected from the group consisting of halogen, -OH, C 1-6 alkyl, C 1- 6 haloalkyl
  • Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur.
  • Ring B is selected from the group consisting of optionally substituted indazolyl, optionally substituted imidazo[1,2- a]pyridyl, and optionally substituted 2,7a-dihyrdobenzo[d]oxazolyl.
  • each Rb is independently selected from the group consisting of halogen, C 1-6 alkyl, C 1-6 haloalkyl, and C 1-6 alkoxy. 22.
  • each Rb is independently selected from the group consisting of fluoro, methyl, methoxy, ethoxy, -CHF 2 , and -CF 3 .
  • q is 2 or 3.
  • a pharmaceutical composition comprising a compound of any one of embodiments 1- 25, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients.
  • a pharmaceutical composition comprising a compound of any one of embodiments 1- 25 and 27, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients. 29.
  • the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CNN, ANN, TNN, and GNN, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C).
  • nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CAG, CAG/CTG, GCG, GCN, CGG, CCG, CCCCGCCCCGCG, GCA, GGGGCC, CTG, GAA, ATTCT, TGGAA, GGCCTG, AAGGG, CCCTCT, ATTTT/ATTTC, and CCCTCT, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C).
  • A adenine
  • T thymine
  • G guanine
  • C cytosine
  • nucleotide repeat expansion comprises a trinucleotide sequence repeated two or more times, wherein the trinucleotide sequence is selected from the group consisting of CAG, CTG, CGG, and GCN. 33.
  • a method of treating a disease in a subject in need thereof comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is selected from the group consisting of Dentatorubropallidoluysian atrophy, Huntington's disease, spinal and bulbar muscular atrophy, SCA1 (Spinocerebellar ataxia Type 1), SCA2 (Spinocerebellar ataxia Type 2), SCA3 (Spinocerebellar ataxia Type 3 or Machado-Joseph disease), SCA6 (Spinocerebellar ataxia Type 6), SCA7 (Spinocerebellar ataxia Type 7), SCA12 (Spinocerebellar ataxia Type 12), SCA17 (Spinocerebellar ataxia Type 17), FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome
  • a method of treating a disease in a subject in need thereof comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is Huntington’s disease.
  • 35. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is Myotonic dystrophy 1. 36.
  • a method of treating a disease in a subject in need thereof comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is selected from the group consisting of FRAXA (Fragile X syndrome), FXTAS (Fragile X- associated tremor/ataxia syndrome), and FRAXE (Fragile XE mental retardation).
  • FRAXA Dragile X syndrome
  • FXTAS Fragile X- associated tremor/ataxia syndrome
  • FRAXE Fragile XE mental retardation
  • LC-MS chromatograms and spectra were recorded using an Agilent 1200 or Shimadzu LC-20 AD&MS 2020 instrument using a C-18 column such as C182.1 x 30 mm, unless otherwise stated. Injection volumes were 0.7 – 8.0 ⁇ l and the flow rates were typically 0.8 or 1.2 ml/min. Detection methods were diode array (DAD) or evaporative light scattering (ELSD) as well as positive ion electrospray ionisation. MS range was 100 - 1000 Da. Solvents were gradients of water and acetonitrile both containing a modifier (typically 0.01 – 0.04 %) such as trifluoroacetic acid or ammonium carbonate.
  • DAD diode array
  • ELSD evaporative light scattering
  • MS range was 100 - 1000 Da.
  • Solvents were gradients of water and acetonitrile both containing a modifier (typically 0.01 – 0.04 %) such as trifluor
  • Step 2 Preparation of (E)-5-bromo-2,3-difluorobenzaldehyde oxime [0215] To a mixture of 5-bromo-2, 3-difluorobenzaldehyde (40 g, 181 mmol) in THF (400 mL) were added NH 2 OH ⁇ HCl (15 g, 217 mmol) and K 2 CO 3 (30 g, 217 mmol). The mixture was stirred at 40 o C for 16 h. The reaction was diluted with water (300 mL) and extracted with EA (400 mL x 3).
  • Step 3 Preparation of 5-bromo-7-fluoro-1H-indazole [0216] To a mixture of (E)-5-bromo-2, 3-difluorobenzaldehyde oxime (30 g, 128 mmol) in 1,4-dioxane (300 mL) was added N 2 H 4 . H 2 O (44.7 g, 894 mmol). The mixture was stirred at 145 o C for 16 h. The mixture was diluted with water (350 mL) and extracted with EA (450 mL x 3). The combined organic layer was washed with brine (300 mL), dried over Na 2 SO 4 and evaporated in vacuo.
  • Step 4 Preparation of 5-bromo-7-fluoro-2-methyl-2H-indazole [0217] To a mixture of 5-bromo-7-fluoro-1H-indazole (33 g, 154 mmol) in EA (330 mL) was added trimethyloxonium tetrafluoroborate (27.2 g, 185 mmol) and stirred at r.t for 5 h. The mixture was quenched with NaHCO 3 (200 mL) and extracted with EA (350 mL x 3). The combined organic layer was washed with brine (400 mL), dried over Na 2 SO 4 , filtered and concentrate in vacuo.
  • Step 5 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0218] To a mixture of 5-bromo-7-fluoro-2-methyl-2H-indazole (10 g, 44 mmol) and diphenylmethanimine (7.93 g, 44 mmol) in 1.4-dioxane (200 mL) were added BINAP (5.46 g, 8 mmol), Pd(OAc) 2 (1 g, 4.4 mmol) and Cs 2 CO 3 (28.6 g, 88 mmol). The mixture was stirred at 100 °C for 16 h.
  • Step 6 Preparation of 7-fluoro-2-methyl-2H-indazol-5-amine hydrochloride [0219] A mixture of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (5 g, 15.2 mmol) in 3M HCl / EA (70 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (2.5 g, yield 82%) as a yellow solid. ESI-MS (M+H) + : 166.1.
  • Step 7 Preparation of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine [0220] A solution of 4-chloro-1H-pyrrolo[2,3-b]pyridine (96 g, 627.45 mmol) in dimethylsulfide borane (600 mL, 2M in THF) was stirred at 60 o C for 16 h.
  • Step 8 Preparation of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate [0221] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (350 mg, 2.26 mmol) and tert-butyl (S)-2-methylpiperazine-1-carboxylate (904 mg, 4.52 mmol) in a sealed tube was added DIEA (1.5 g, 11.3 mmol). The reaction mixture was stirred at 140 °C for 16 h.
  • Step 9 Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate [0222] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (180 mg, 0.57 mmol) and 7-fluoro-2-methyl-2H-indazol-5- amine (188 mg, 1.14 mmol) in DCM (10 mL) were added TEA (230 mg, 2.28 mmol) and triphosgene (271 mg, 0.91 mmol) at 0 °C.
  • TEA 230 mg, 2.28 mmol
  • Step 10 Preparation of (S)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride [0223] To a solution of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 3 M HCl / EA (1 mL).
  • Step 2 Preparation of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate
  • R tert-butyl
  • pyrrolidin-3-yl methyl carbamate
  • Step 3 Preparation of tert-butyl (R)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo [2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate
  • DMAP 20 mg, 0.16 mmol
  • phenyl (7-fluoro-2-methyl-2H-indazol-5-yl) carbamate (493 mg, 1.73 mmol) at 0 o C.
  • Step 4 Preparation of (R) -N- (7-fluoro-2-methyl-2H-indazol-5-yl) -4- (3-(methylamino) pyrrolidin-1-yl) -2,3-dihydro-1H-pyrrolo [2,3-b] pyridine-1-carboxamide 2,2,2- trifluoroacetate [0227] To a mixture of tert-butyl (R)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl) -2,3-dihydro-1H-pyrrolo [2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate (360 mg, 0.71 mmol) in EA (5 mL) was added 3M HCl / EA (5 mL).
  • Step 2 Preparation of tert-butyl (S)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate
  • tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate 200 mg, 0.63 mmol
  • phenyl (7-fluoro-2-methyl-2H-indazol-5-yl)carbamate 197 mg, 0.69 mmol
  • DMAP 8 mg, 0.06 mmol
  • Step 3 Preparation of (S)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0230] To a solution of tert-butyl (S)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl) carbamate (20 mg, 0.04 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL).
  • Step 2 Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate [0232] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (5 mL) were added TEA (159 mg, 1.57 mmol), triphosgene (112 mg, 0.38 mmol), 7-fluoro-2-methyl-2H-indazol-5-amine (52 mg, 0.31 mmol).
  • Step 3 Preparation of (R)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0233] To a solution of tert-butyl (R)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL).
  • Example 5 Preparation of 4-(3,3-dimethylpiperazin-1-yl) -N-(7-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate (Compoun Step 1: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate [0234] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine (250 mg, 1.62 mmol) and tert-butyl 2,2-dimethylpiperazine-1-carboxylate (1.3 g, 6.49 mmol) in a sealed tube was stirred at 140 °C for 16 h.
  • Step 2 Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate [0235] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (200 mg, 0.60 mmol) and 7-fluoro-2-methyl-2H-indazol-5- amine (199 mg, 1.20 mmol) in THF (4 mL) were added TEA (182 mg, 1.81 mmol) and triphosgene (356 mg, 1.20 mmol) at 0 o C.
  • Step 3 Preparation of 4-(3,3-dimethylpiperazin-1-yl) -N-(7-fluoro-2-methyl-2H-indazol-5-yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide diformate
  • Step 2 Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0238] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (300 mg, 0.99 mmol) and 7-fluoro-2-methyl-2H-indazol-5-amine (163 mg, 0.99 mmol) in THF (10 mL) were added TEA (300 mg, 2.97 mmol) and triphosgene (294 mg, 0.99 mmol) at 0 °C.
  • Step 3 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate
  • tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate 120 mg, 0.24 mmol
  • EA tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (120 mg, 0.24 mmol) in EA (2 mL)
  • Example 7 Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 7)
  • Compound 7 Step 1 Preparation of 5-bromo-4-fluoropyridin-2-amine [0240] To a solution of 4-fluoropyridin-2-amine (24 g, 0.21 mol) in ACN (300 mL) was added NBS (38.1 g, 0.21 mol), the mixture was stirred for 4 h at RT.
  • Step 2 Preparation of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine [0241] To a solution of 5-bromo-4-fluoropyridin-2-amine (10 g, 52.36 mmol ) in IPA (120 mL) was added 1-bromopropan-2-one (8.8 mL, 104.71 mmol), the mixture was stirred at 85 o C for 16 h. The mixture was concentrated in vacuo, the residue was diluted with 2 M NaOH (100 mL) and stirred at RT overnight. The mixture was extracted with EA (150 mL ⁇ 3). The organic layer was washed with brine, dried with Na 2 SO 4 and concentration in vacuum.
  • Step 3 Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine [0242] To a solution of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine (4 g, 17.46 mmol), diphenylmethanimine (3.8 g, 20.96 mmol), Cs 2 CO 3 (17 g, 52.39 mmol) and Pd(OAc) 2 (39.2 mg, 0.17 mmol) in 1,4-dioxane (50 mL) was added BINAP (217 mg, 0.35 mmol), the mixture was stirred at 100 o C for 16 h under N 2 .
  • Step 4 Preparation of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride [0243] A solution of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (2.35 g, 7.13 mmol ) in 3M HCl / EA (24 mL) was stirred at RT for 2 h. The precipitate was filtered, washed with EA (30 mL) and dried to give the title compound (1.4 g, 97.32 %) as a white solid.
  • ESI-MS (M+H) + 166.1.
  • Step 5 Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0244] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.32 mmol) and 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (132 mg, 0.65 mmol) in THF (5 mL) was added TEA (332 mg, 3.29 mmol), then triphosgene (194 mg, 0.65 mmol) was added slowly at 0 o C.
  • Step 6 Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate
  • a mixture of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.18 mmol) in EA (3 mL) was added 3 M HCl / EA (1.5 mL), the mixture was stirred at RT for 2 h.
  • Example 8 Preparation of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate (Compound 8) Step 1: Preparation of 5-bromo-2,3-difluoro-4-methylbenzaldehyde [0246] To a solution of 2,3-difluoro-4-methylbenzaldehyde (25 g, 0.16 mol) in concentrated H 2 SO 4 (300 mL) was added NBS (31.38 g, 0.18 mmol) .
  • Step 2 Preparation of (E)-5-bromo-2,3-difluoro-4-methylbenzaldehyde oxime
  • NH 2 OH.HCl 8.58 g, 0.12 mol
  • THF 300 mL
  • K 2 CO 3 16.56 g, 0.12 mol
  • Step 3 Preparation of 5-bromo-7-fluoro-6-methyl-1H-indazole [0248] To a mixture of (E)-5-bromo-2,3-difluoro-4-methylbenzaldehyde oxime (20 g, 0.08 mol) in 1.4-dioxane (200 mL) was added N 2 H 4 .H 2 O (20.48 g, 0.64 mol). The mixture was stirred at 150 o C for 10 h. The mixture was diluted with H 2 O (300 mL) and extracted with EA (300 mL x 3). The organic phase was washed with brine (300 mL x 3), dried over anhydrous Na 2 SO 4 and concentrated.
  • Step 4 Preparation of 5-bromo-7-fluoro-2,6-dimethyl-2H-indazole [0249] To a mixture of 5-bromo-7-fluoro-6-methyl-1H-indazole (15.1 g, 0.07 mol) in THF (200 mL) was added NaH (5.6 g, 0.14 mol) at 0 o C, the mixture was stirred at this temperature for 30 min. CH 3 I (29.82 g, 0.21 mol) was added to the mixture and stirred at r.t for 4 h. The mixture was diluted with H 2 O (100 mL) and extracted with EA (200 mL x 2).
  • Step 5 Preparation of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0250] To a mixture of 5-bromo-7-fluoro-2,6-dimethyl-2H-indazole (3 g, 12.3 mmol), diphenylmethanimine (2.69 g, 14.88 mmol) in 1,4-dioxane (50 mL) were added Pd 2 (dba) 3 (1.12 g, 1.23 mmol), BINAP (1.53 g, 2.46 mmol) and Cs 2 CO 3 (8.02 g, 24.6 mmol), the mixture was charged with Ar for three times and stirred at 115 o C for 16 h.
  • Step 6 Preparation of 7-fluoro-2,6-dimethyl-2H-indazol-5-amine hydrochloride [0251] A mixture of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (3.5 g, 10.20 mmol) in 3M EA / HCl (50 mL) was stirred at r.t for 2 h. The precipitate was filtered to give title product (1.6 g, 87.63%) as a yellow solid. ESI-MS (M+H) + : 180.0.
  • Step 7 Preparation of tert-butyl 4-(1-((7-fluoro-2,6-dimethyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate [0252] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (100 mg, 0.33 mmol) and 7-fluoro-2,6-dimethyl-2H-indazol-5-amine (160 mg, 0.97 mmol) in THF (2 mL) were added TEA (98 mg, 0.97 mmol) and triphosgene (292 mg, 0.97 mmol) at 0 o C.
  • Step 8 Preparation of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate
  • a mixture of tert-butyl 4-(1-((7-fluoro-2,6-dimethyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL).
  • Step 2 Preparation of 7-methoxy-2-methyl-2H-indazol-5-amine HCl salt
  • a mixture of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (3.0 g, 8.80 mmol) in 4 M HCl / EA (40 mL) was stirred at RT for 16 h. The mixture was filtered and the residue was diluted with PE / EA (v:v 1:1, 20 mL) and stirred at RT for 2 h. The precipitate was filtered and dried to give the title compound (1.30 g, Y: 83.45 %) as a white oil.
  • Step 3 Preparation of tert-butyl 4-(1-((7-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0256] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) in THF (5 mL) were added TEA (199 mg, 1.97 mmol), triphosgene (117 mg, 0.39 mmol), 7-methoxy-2-methyl-2H-indazol-5-amine HCl salt (70 mg, 0.39 mmol).
  • Step 4 Preparation of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate
  • tert-butyl 4-(1-((7-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate 40 mg, 0.08 mmol
  • EA tert-butyl 4-(1-((7-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL)
  • Step 2 Preparation of 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine
  • Step 3 Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0260] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (60 mg, 0.19 mmol) and 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (130 mg, 0.78 mmol) in DCM (5 mL) were added TEA (119 mg, 1.18 mmol) and triphosgene (223 mg, 0.78 mmol) at 0 o C.
  • Step 4 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0261] To a mixture of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (42 mg, 0.08 mmol) in EA (3 mL) was added 3M HCl / EA (0.5 mL).
  • Step 1 Preparation of 6-bromo-8-methoxy-2-methylimidazo[1,2-a] pyridine
  • IPA 150 mL
  • 1-bromo-2,2-dimethoxypropane 21.64 g, 118.23 mmol
  • PPTS PPTS
  • Step 2 Preparation of N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine [0263] To a mixture of 6-bromo-8-methoxy-2-methylimidazo[1,2-a] pyridine (5 g, 20.75 mmol) and diphenylmethanimine (5.6 g, 31.12 mmol) in 1,4-dioxane (50 mL) were added BINAP (2.5 g, 4.15 mmol), Pd(OAc) 2 (467 mg, 2.08 mmol) and Cs 2 CO 3 (20.3 g, 62.25 mmol).
  • Step 3 Preparation of 8-methoxy-2-methylimidazo[1,2-a] pyridin-6-amine hydrochloride
  • EA N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine
  • 4M HCl / EA 40 mL
  • the reaction solution was stirred at RT for 2 h.
  • the mixture was filtered, washed with EA (20 mL) and dried in vacuo.
  • the residue was beated with PE: EA (1:1, 20 mL) to give title product (2 g, 83%) as a white solid.
  • Step 4 Preparation of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate [0265] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (100 mg, 0.33 mmol) and 8-methoxy-2-methylimidazo[1,2-a] pyridin-6-amine hydrochloride (175 mg, 0.97 mmol) in THF (3 mL) were added TEA (98 mg, 0.97 mmol) and triphosgene (288 mg, 0.97 mmol) at 0 o C.
  • Step 5 Preparation of N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) -4-(piperazin-1- yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide diformate
  • tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40)
  • Example 12 Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 12)
  • Step 1 Preparation of 5-bromo-2,7-dimethyl-2H-indazole [0267] To a mixture of 5-bromo-7-methyl-2H-indazole (9.00 g, 42.65 mmol) in EA (150 mL) was added trimethyloxonium tetrafluoroborate (9.47 g, 68.98 mmol). The mixture was stirred at r.t for 2 h.
  • Step 2 Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine
  • a mixture of 5-bromo-2,7-dimethyl-2H-indazole (5 g, 22.22 mmol) in 1,4-dioxane (50 mL) were added diphenylmethanimine (4.22 g, 23.33 mmol), BINAP (2.77 g, 4.44 mmol), Cs 2 CO 3 (14.48 g, 44.44 mmol), Pd(OAc) 2 (499 mg, 2.22 mmol).
  • the mixture was stirred at 115 °C for 16 h.
  • Step 3 Preparation of 2,7-dimethyl-2H-indazol-5-amine hydrochloride [0269] To a solution of N-(2,7-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (924 mg, 2.84 mmol) in 3M HCl / EA (10 mL) was stirred at r.t for 4 h. The precipitate was filtered to give title product (500 mg, 89 %) as a white solid. ESI-MS (M+H) + : 162.1.
  • Step 4 Preparation of tert-butyl 4-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0270] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 2,7-dimethyl-2H-indazol-5-amine (110 mg, 0.66 mmol) in THF (10 mL) were added triethylamine (0.25 mL, 1.65 mmol) and triphosgene (200 mg, 0.66 mmol) at 0 o C.
  • Step 5 Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide
  • Step 2 Preparation of methyl 5-bromo-1H-indazole-7-carboxylate [0273] To a mixture of methyl 2-amino-5-bromo-3-methylbenzoate (5 g, 20.57 mmol) and KOAc (2116 mg, 21.59 mmol) in CHCl 3 (50 mL) was added Ac 2 O (4 mL). The resulting mixture was stirred at 0 o C for 1 h. Isopentylnitrite (6 mL, 45.25 mmol) and 18-crown-6 (977 mg, 3.70 mmol) were added to the mixture. The resulting mixture was stirred at RT for 16 h.
  • Step 3 Preparation of methyl 5-bromo-2-methyl-2H-indazole-7-carboxylate [0274] To a mixture of methyl 5-bromo-1H-indazole-7-carboxylate (10.5 g, 41.18 mmol) in EA (100 mL) was added trimethyloxonium tetrafluoroborate (9.14 g, 61.76 mmol). The resulting mixture was stirred at RT for 2 h. The mixture was diluted with water (100 mL), extracted with EA (100 mL ⁇ 3). The organic layer was washed with brine, dried with Na 2 SO 4 and concentrated in vacuo to give title product (9.43 g, 85%) as a yellow solid.
  • Step 4 Preparation of (5-bromo-2-methyl-2H-indazol-7-yl) methanol [0275] To a mixture of methyl 5-bromo-2-methyl-2H-indazole-7-carboxylate (7 g, 26.02 mmol) in dry-THF (70 mL) was added LiAlH 4 (52 mL, 52.04 mmol, 1.0 M in THF). The resulting mixture was stirred at 0 o C for 2 h. The mixture was quenched by water (2 mL) dropwise at 0 o C. Then added 15% NaOH (2 mL) and water (6 mL). The mixture was diluted with THF (20 mL) and Na 2 SO 4 .
  • Step 5 Preparation of 5-bromo-2-methyl-2H-indazole-7-carbaldehyde
  • To a mixture of (5-bromo-2-methyl-2H-indazol-7-yl) methanol (5 g, 20.75 mmol) in DCM (50 mL) was added Dess-Martin periodinane (10.5 g, 24.89 mmol). The resulting mixture was stirred at RT for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo. The crude was purified by silica gel column (PE/EA 1:1) to give title product (2 g, Y: 40.8 %) as a yellow solid.
  • Step 7 Preparation of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine [0278] To a mixture of 5-bromo-7-(difluoromethyl)-2-methyl-2H-indazole (5 g, 19.16 mmol) and diphenylmethanimine (5.2 g, 28.75 mmol) in 1,4-dioxane (50 mL) were added BINAP (2387 mg, 3.83 mmol), Pd(OAc) 2 (431 mg, 1.92 mmol) and Cs 2 CO 3 (18.68 g, 57.48 mmol).
  • Step 8 Preparation of 7-(difluoromethyl)-2-methyl-2H-indazol-5-amine hydrochloride [0279] To a mixture of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine (4 g, 11.08 mmol) in EA (20 mL) was added 4M HCl / EA (40 mL). The reaction solution was stirred at RT for 2 h. The precipitate was filtered, washed with EA (20 mL) and dried in vacuo. The crude was diluted with PE : EA (1 : 1, 20 mL) and stirred at RT for 1 h.
  • Step 9 Preparation of tert-butyl 4-(1-((7-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate [0280] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (80 mg, 0.26 mmol) and 7-(difluoromethyl)-2-methyl-2H-indazol-5-amine hydrochloride (156 mg, 0.79 mmol) in THF (2 mL) were added TEA (80 mg, 0.79 mmol) and triphosgene (193 mg, 0.65 mmol) at 0 o C.
  • TEA 80 mg, 0.79 mmol
  • Step 10 Preparation of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate
  • a mixture of tert-butyl 4-(1-((7-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (100 mg, 0.19 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL).
  • Step 1 Preparation of 5-bromo-2-methyl-7-(trifluoromethyl)-2H-indazole [0282] To a mixture of 5-bromo-7-(trifluoromethyl)-1H-indazole (10 g, 37.74 mmol) in EA (100 mL) was added trimethyloxonium tetrafluoroborate (27.9 g, 188.68 mmoL). The mixture was stirred at RT for 16 h. The mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3).
  • Step 2 Preparation of N-(2-methyl-7-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine [0283] To a mixture of 5-bromo-2-methyl-7-(trifluoromethyl)-2H-indazole (4.5 g, 16.13 mmol) in 1,4-dioxane (50 mL) were added diphenylmethanimine (4.4 g, 24.19 mmol), BINAP (2.0 g, 3.23 mmol), Cs 2 CO 3 (10.5 g, 32.26 mmol), Pd(OAc) 2 (363 mg, 1.61 mmol), the mixture was charged with N 2 for three times and stirred at 120 o C for 16 h under N 2 .
  • diphenylmethanimine 4.4 g, 24.19 mmol
  • BINAP 2.0 g, 3.23 mmol
  • Cs 2 CO 3 (10.5 g, 32.26 mmol
  • Step 3 Preparation of 2-methyl-7-(trifluoromethyl)-2H-indazol-5-amine HCl salt
  • EA N-(2-methyl-7-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine
  • 4M HCl / EA 40 mL
  • the mixture was stirred at RT for 16 h.
  • Step 4 Preparation of tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0285] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (120 mg, 0.39 mmol) in THF (5 mL) were added TEA (239 mg, 2.37 mmol), triphosgene (141 mg, 0.47 mmol), 2-methyl-7-(trifluoromethyl)-2H-indazol-5-amine HCl salt (85 mg, 0.39 mmol).
  • Step 5 Preparation of N-(2-methyl-7-(trifluoromethyl)-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate
  • tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate 80 mg, 0.15 mmol
  • EA tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.15
  • Step 2 Preparation of (E)-5-bromo-2-fluoro-4-methoxybenzaldehyde oxime
  • NH 2 OH ⁇ HCl 35.5 g, 515 mmol
  • K 2 CO 3 71.1 g, 515 mmol
  • Step 5 Preparation of methyl 5-bromo-2-methyl-2H-indazol-6-ol
  • a mixture of 5-bromo-6-methoxy-2-methyl-2H-indazole (20 g, 83.3 mmol) in BBr 3 (1M, 400 mL, 400 mmol) was stirred at r.t for 16 h.
  • the mixture was quenched with MeOH (300 mL) at 0 o C and concentrated in vacuo.
  • the residue was diluted with sat.Na 2 CO 3 (300 mL) and stirred for 16 h.
  • the precipitate was filtered and dried under vacuum to afford title compound (16 g, 85.4% yield) as a yellow solid.
  • Step 6 Preparation of 5-bromo-6-ethoxy-2-methyl-2H-indazole [0292] To a solution of 5-bromo-2-methyl-2H-indazol-6-ol (50 g, 221 mmol) in DMF (1000 mL) was added K 2 CO 3 (91.5 g, 663 mmol), CH 3 CH 2 I (87.3 g, 552.5 mmol) was added at 0 o C, the mixture was stirred at r.t for 16 h. The mixture was diluted with water (3000 mL), the precipitate was filtered, washed with water and dried to afford title compound (47 g, 83.3% yield) as an off-white solid.
  • Step 7 Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0293] To a solution of 5-bromo-6-ethoxy-2-methyl-2H-indazole (3 g, 11.76 mmol), diphenylmethanimine (2.56 g, 14.11 mmol), Cs 2 CO 3 (11.49 g, 35.28 mmol) and Pd(OAc) 2 (26.40 mg, 0.12 mmol) in 1,4-dioxane (50 mL) was added BINAP (146 mg, 0.23 mmol), the mixture was stirred at 100 o C for 16 h under N 2 .
  • Step 8 Preparation of 6-ethoxy-2-methyl-2H-indazol-5-amine
  • a solution of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (2.0 g, 5.63 mmol ) in 3M HCl / EA (15 mL) was stirred at RT for 2 h.
  • the mixture was diluted with sat. Na 2 CO 3 (40 mL), extracted with EA (60 mL ⁇ 3).
  • the organic layer was washed with brine, dried with Na 2 SO 4 and concentration in vacuo.
  • Step 9 Preparation of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0295] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 6-ethoxy-2-methyl-2H-indazol-5-amine (125 mg, 0.66 mmol) in THF (10 mL) were added TEA (199 mg, 1.97 mmol) and triphosgene (194 mg, 0.66 mmol) at 0 o C.
  • Step 10 Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate
  • EA tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.17 mmol) in EA (5 mL) was added 3M HCl / EA (1.5 mL), the mixture was stirred at RT for 2 h.
  • Step 2 Preparation of 6-bromo-4-methoxy-2-methylbenzo[d]oxazole [0298] To a solution of N-(4-bromo-2-methoxyphenyl)acetamide (25 g, 102.88 mmol) in AcOH : DMF (180 mL : 22 mL) were added Pd(OAc) 2 (2.5 g, 0.1wt), K 2 S 2 O 8 (37.65 g, 154.32 mmol), TfOH (15.43 g, 102.88 mmol) at 0 o C. The mixture was stirred at 100 o C for 16 h.
  • Pd(OAc) 2 2.5 g, 0.1wt
  • K 2 S 2 O 8 37.65 g, 154.32 mmol
  • TfOH 15.43 g, 102.88 mmol
  • Step 3 Preparation of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine
  • Step 4 Preparation of 4-methoxy-2-methylbenzo[d]oxazol-6-amine [0300] To a solution of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine (280 mg, 0.82 mmol) in EA (1 mL) was added 4 M HCl / EA (3 mL) at 0 o C. Then the mixture was stirred at RT for 2 hours. The precipitate was filtered, washed with EA. Then adjusted pH to 8 with Na 2 CO 3 aqueous, the precipitate was filtered and dried under vacuum to afford title product (124 mg, yield: 82%) as a white solid.
  • Step 5 Preparation of tert-butyl 4-(1-((4-methoxy-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0301] To a solution of 4-methoxy-2-methylbenzo[d]oxazol-6-amine (53.4 mg, 0.30 mmol), tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.20 mmol) in THF (1.5 mL) were added TEA (0.12 mL, 0.60 mmol) and triphosgene (89 mg, 0.30 mmol) at 0 o C.
  • Step 6 Preparation of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide
  • HMDS HMDS
  • Step 1 Preparation of 6-bromo-2,4-dimethylbenzo[d]oxazole [0303] To a mixture of N-(4-bromo-2-methylphenyl)acetamide (10 g, 44.05 mmol) in AcOH (160 mL) and DMF (20 mL) were added TfOH (6.6 g, 44.05 mmol), K 2 S 2 O 8 (17.8 g, 66.08 mmol) and Pd(OAc) 2 (987 mg, 4.41 mmol), the mixture was charged with N 2 for three times and stirred at 100 °C for 16 h under N 2 .
  • Step 2 Preparation of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine [0304] To a mixture of 6-bromo-2,4-dimethylbenzo[d]oxazole (2 g, 8.85 mmol) and diphenylmethanimine (2.4 g, 13.27 mmol) in 1,4-dioxane (50 mL) were added BINAP (1.10 g, 1.77 mmol), Pd(OAc) 2 (199 mg, 0.88 mmol) and Cs 2 CO 3 (8.6 g, 26.55 mmol). The reaction solution was stirred at 100°C for 16 h.
  • Step 3 Preparation of 2,4-dimethylbenzo[d]oxazol-6-amine [0305] A mixture of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine (1.9 g, 5.83 mmol) in 3M HCl / EA (10 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was diluted with water (5 mL), adjusted pH to 7 ⁇ 8 by sat. Na 2 CO 3 , extracted with EA (20 mL ⁇ 3). The organic layer was washed with brine (30 mL), dried with Na 2 SO 4 and concentrated in vacuo.
  • Step 4 Preparation of tert-butyl 4-(1-((2,4-dimethylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0306] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.49 mmol) and 2,4-dimethylbenzo[d]oxazol-6-amine (240 mg, 1.48 mmol) in THF (2 mL) were added TEA (247.4 mg, 2.45 mmol) and triphosgene (439.5 mg, 1.48 mmol) at 0 o C.
  • Step 5 Preparation of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide
  • Step 1 Preparation of N-(4-bromo-2,6-difluorophenyl)acetamide
  • Step 2 Preparation of 6-bromo-4-fluoro-2-methylbenzo[d]oxazole [0309] To a solution of N-(4-bromo-2,6-difluorophenyl)acetamide (29 g, 0.12 mol) in 1- methylpyrrolidin-2-one (300 mL) was added Cs 2 CO 3 (97.8 g, 0.36 mol). The mixture was stirred at 150 o C for 2 h.
  • Step 3 Preparation of N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine [0310] A mixture of 6-bromo-4-fluoro-2-methylbenzo[d]oxazole (5.3 g, 23.1 mmol), diphenylmethanimine (5.82 mL, 34.7 mmol), Cs 2 CO 3 (22.5 g, 69.3 mmol), Pd(OAc) 2 (520 mg, 2.31 mmol) and BINAP (2.88 g, 4.62 mmol) in 1,4-dioxane (80 mL) was stirred at 100 o C for 16 h.
  • Step 4 Preparation of 4-fluoro-2-methylbenzo[d]oxazol-6-amine HCl salt
  • N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine (2 g, 6.06 mmol) in MeOH (20 mL) was added 3.0 M HCl / EA (4 mL). The mixture was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (1 g, yield: 99.41%) as a white solid.
  • ESI-MS (M+H) + 167.1.
  • Step 5 Preparation of tert-butyl 4-(1-((4-fluoro-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0312] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 4-fluoro-2-methylbenzo[d]oxazol-6-amine (110 mg, 0.66 mmol) in THF (10 mL) were added triethylamine (0.25 mL, 1.65 mmol) and triphosgene (200 mg, 0.66 mmol) at 0 o C.
  • Step 6 Preparation of N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide
  • Step 2 Preparation of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1- carboxylate tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1- carboxylate
  • tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1- carboxylate [0315] To a solution tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,5-dihydro- 1H-pyrrole-1-carboxylate (500 mg, 1.74 mmol) in THF (10 mL) was added Pd/C (250 mg, 50 % wt).
  • Step 3 Preparation of tert-butyl 3-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1-carboxylate [0316] To a solution of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine- 1-carboxylate (400 mg, 1.38 mmol) and 7-fluoro-2-methyl-2H-indazol-5-amine (683 mg, 4.14 mmol) in THF (8 mL) were added TEA (697 mg, 6.90 mmol) and triphosgene (614 mg, 2.07 mmol) at 0 o C.
  • Step 4 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(pyrrolidin-3-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride [0317] To a solution of tert-butyl 3-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4 M HCl / EA (3 mL) at 0 o C.
  • Example 20 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 20) Step 1: Preparation of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate [0318] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (500 mg, 3.22 mmol) and tert-butyl 4,7-diazaspiro[2.5]octane-4-carboxylate (1.36 g, 6.45 mmol) in a sealed tube was stirred at 140 o C for
  • Step 2 Preparation of tert-butyl 7-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5] octane-4-carboxylate [0319] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol) and 7-fluoro-2-methyl-2H-indazol- 5-amine (199.95 mg, 1.21 mmol) in THF (20 mL) were added TEA (245 mg, 2.42 mmol) and triphosgene (359.2 mg, 1.21mmol) at 0 o C.
  • Step 3 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate
  • Step 2 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine
  • Step 3 Preparation of 8-fluoro-2-methylimidazo[1,2-a] pyridin-6-amine
  • N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine 15 g, 45.6 mmol
  • 3M HCl-EA 90 mL
  • Step 4 Preparation of 4-(4-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine
  • a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and 1-methylpiperazine (580 mg, 5.81 mmol) in DIEA (1.3 g, 9.70 mmol) was stirred at 140 °C for 16 h in sealed tube.
  • the reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mL x 3). The combined organic layer was washed with brine, dried over Na 2 SO 4 , filtered and concentrated in vacuo.
  • Step 5 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide
  • Example 22 Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 22) Step 1: Preparation of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate [0326] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and tert-butyl (2R,6S)-2,6-dimethylpiperazine-1-carboxylate (832 mg,3.88 mmol) was stirred at 140 o C for 16 h in a sealed tube.
  • Step 2 Preparation of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate [0327] To a solution of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (160 mg, 0.48 mmol) and 7-fluoro-2-methyl-2H-indazol-5- amine (158 mg, 0.96 mmol) in THF (15 mL) were added triethylamine (0.33 mL, 2.40 mmol) and triphosgene (285 mg, 0.96 mmol) at 0 o C
  • Step 3 Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide
  • Example 23 Preparation of N-(6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) -4-(piperazin- 1-yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
  • C ompound 23 Step 1 Preparation of tert-butyl 4-(1-((6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate.
  • Step 2 Preparation of N-(6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) -4-(piperazin-1-yl) -2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
  • Example 24 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Step 1 Preparation of 4-(4-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine.
  • Step 2 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4-methylpiperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Example 25 Preparation of N-(5,7-dimethylimidazo[1,2-c]pyrimidin-2-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 1 Preparation of ethyl 5,7-dimethylimidazo[1,2-c]pyrimidine-2-carboxylate.
  • 2,6-dimethylpyrimidin-4-amine (10 g, 81.30 mmol) in EtOH (100 mL) was added ethyl 3-bromo-2-oxopropanoate (24 g, 121.95 mmol).
  • Step 3 Preparation of tert-butyl (5,7-dimethylimidazo[1,2-c]pyrimidin-2-yl)carbamate.
  • TEA 1,2-dimethylimidazo[1,2-c]pyrimidine-2-carboxylic acid
  • DPPA 1.6 g, 5.76 mmol
  • Step 5 Preparation of tert-butyl 4-(1-((5,7-dimethylimidazo[1,2-c]pyrimidin-2- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Example 26 Preparation of N-(4,6-dimethylpyrazolo[1,5-a]pyrazin-2-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • C ompound 26 Step 1 Preparation of tert-butyl 4-(1-((4,6-dimethylpyrazolo[1,5-a]pyrazin-2-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 2 Preparation of N-(4,6-dimethylpyrazolo[1,5-a]pyrazin-2-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Example 27 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1- methylpyrrolidin-3-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • C ompound 27 Step 1 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1-methylpyrrolidin-3-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Example 28 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Step 1 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1-methylpiperidin-4-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Example 29 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperidin-4-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 1 Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,6- dihydropyridine-1(2H)-carboxylate.
  • Step 2 Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1- carboxylate.
  • Step 3 Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate.
  • Step 4 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperidin-4-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 2 Preparation of tert-butyl (1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)(methyl)carbamate.
  • Example 31 Preparation of 4-(piperazin-1-yl)-N-(quinolin-4-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • C ompound 31 Step 1 Preparation of tert-butyl 4-(1-(quinolin-4-ylcarbamoyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 2 Preparation of 4-(piperazin-1-yl)-N-(quinolin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxamide formate.
  • 4-(piperazin-1-yl)-N-(quinolin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxamide formate [0351] To a solution of tert-butyl 4-(1-(quinolin-4-ylcarbamoyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.11 mmol) in EA (2 mL) was added 4 M HCl / EA (0.5 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo.
  • Example 32 Preparation of N-(1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
  • C ompound 32 Step 1 Preparation of tert-butyl 4-(1-((1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate.
  • Step 2 Preparation of N-(1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
  • Step 1 Preparation of tert-butyl 7-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5] octane-4- carboxylate.
  • Step 2 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Example 34 Preparation of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 1 Preparation of 5-bromo-6-(cyclopropylmethoxy)-2-methyl-2H-indazole.
  • Step 2 Preparation of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine.
  • a mixture of 5-bromo-6-(cyclopropylmethoxy)-2-methyl-2H-indazole (3.5 g, 12.46 mmol), diphenylmethanimine (5.64 g, 31.15 mmol) and Cs 2 CO 3 (8.12 g, 24.92 mmol) in 1,4- dioxane (40 mL) were added Pd(OAc) 2 (285.04 mg, 1.25 mmol) and BINAP (1.55 g, 2.49 mmol).
  • Step 4 Preparation of tert-butyl 4-(1-((6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 5 Preparation of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Example 35 Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Step 1 Preparation of 6-fluoro-2-methyl-5-nitro-2H-indazole.
  • EA 50 mL
  • trimethyloxonium tetrafluoroborate 2.07 g, 14.01 mmol
  • Step 3 Preparation of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 4 Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate 50 mg, 0.10 mmol
  • EA 5 mL
  • 4M HCl / EA 5 mL
  • Example 36 Preparation of N-(5-fluoro-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 1 Preparation of 5-fluoro-2-methylbenzo[d]oxazol-6-amine.
  • 5-fluoro-2-methyl-6-nitrobenzo[d]oxazole (1 g, 5.10 mmol) in THF (30 mL) and MeOH (10 mL) was added Raney-Nickel (5 mL), the mixture was stirred at room temperature for 3h under H 2.
  • Step 2 Preparation of tert-butyl 4-(1-((5-fluoro-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Example 37 Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Step 1 Preparation of 6-bromo-2,7-dimethylimidazo[1,2-a]pyridine.
  • Step 2 Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine.
  • Step 3 Preparation of 2,7-dimethylimidazo[1,2-a]pyridin-6-amine.
  • a solution of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine (2 g, 0.01 mol) in 3M HCl / EA(20 mL) was stirred at room temperature for 2 hours.
  • Example 38 Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate.
  • Step 1 Preparation of tert-butyl 7-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate.
  • Example 40 Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 1 Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate.
  • Example 41 Preparation of N-(7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Step 1 Preparation of 5-bromo-4-ethoxypyridin-2-amine.
  • NBS 14 g, 0.08 mol
  • Step 4 Preparation of 7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-amine.
  • a solution of N-(7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (2 g, 5.62 mmol) in 3M HCl / EA (20 mL) was stirred at room temperature for 2 hours.
  • the mixture was concentrated in vacuo, the residue was purified by C18 column chromatography (eluted with 0.1% NH 3 .H 2 O in water / CH 3 CN) to afford title product (0.5 g, yield: 46.5 %) as a yellow solid.
  • Example 42 Preparation of N-(2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Step 1 Preparation of 5-bromo-4-(trifluoromethyl)pyridin-2-amine. [0385] To a mixture of 4-(trifluoromethyl)pyridin-2-amine (30.1 g, 185.8 mmol) in DCM (300 mL) was added NBS (36.38 g, 204.4 mmol) at 0°C. The reaction solution was stirred at r.t for 2 h.
  • Step 5 Preparation of tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Example 43 Preparation of N-(6-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Step 1 Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine.
  • Step 3 Preparation of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Example 44 Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide benzoate salt.
  • Step 1 Preparation of 5-bromo-4-fluoropyridin-2-amine. [0395] To a solution of 4-fluoropyridin-2-amine (50 g, 0.45 mol) in ACN (600 mL) was added NBS (79 g, 0.45 mol), the mixture was stirred at 15 o C for 16 h.
  • Step 2 Preparation of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine.
  • Step 4 Preparation of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride.
  • EA N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine
  • Step 7 Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate.
  • Step 8 Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Step 9 Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate salt.
  • Example 45 Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Example 46 Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 1 Preparation of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate.
  • Step 2 Preparation of tert-butyl (R)-(1-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate.
  • Step 3 Preparation of R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Example 47 Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
  • Step 1 Preparation of tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate.
  • Step 2 Preparation of tert-butyl (S)-(1-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate.
  • Example 48 Preparation of N-(6-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4- (piperazin-1-yl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridine-1-carboxamide formate.
  • Step 7 Preparation of tert-butyl 4-(1-((6-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridin-4-yl) piperazine-1-carboxylate.
  • Step 8 Preparation of N-(6-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridine-1-carboxamide formate.
  • Example 49 Preparation of N-(2,5-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Step 1 Preparation of 2,5-dimethyl-6-nitrobenzo[d]oxazole.
  • HNO 3 8.3 mL, 0.198 mol
  • the mixture was stirred at 0 o C for 3 h.
  • Step 3 Preparation of tert-butyl 4-(1-((2,5-dimethylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 4 Preparation of N-(2,5-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Example 50 Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Step 1 Preparation of N-(3-fluoro-2-methylphenyl)acetamide.
  • Step 5 Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine.
  • Step 6 Preparation of tert-butyl 4-(1-((5-fluoro-2,4-dimethylbenzo[d]oxazol-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 7 Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
  • Step 1 Preparation of tert-butyl 7-(1-((5-fluoro-2,4-dimethylbenzo[d]oxazol-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate.
  • Example 52 Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of 2,6-dimethyl-5-nitro-2H-indazole.
  • EA Trimethyloxonium Tetrafluoroborate
  • Step 2 Preparation of 2,6-dimethyl-2H-indazol-5-amine.
  • 2,6-dimethyl-5-nitro-2H-indazole 3 g, 15.62 mmol
  • MeOH 30 mL
  • Raney Nickel 300 mg,
  • NH 3 .H 2 O 3 mL
  • the mixture was charged with H 2 for three times and stirred at r.t for 2 h.
  • the mixture was filtered and the filtrate was concentrated in vacuo to afford title product (1.4 g, yield: 55 %) as a purple solid.
  • Step 3 Preparation of phenyl (2,6-dimethyl-2H-indazol-5-yl)carbamate.
  • phenyl carbonochloridate 116 mg, 0.75 mmol
  • pyridine 147 mg, 1.86 mmol
  • Step 5 Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 53 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-5-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of 4-chloro-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine.
  • 4-chloro-5-methyl-1H-pyrrolo[2,3-b]pyridine To a solution of 4-chloro-5-methyl-1H-pyrrolo[2,3-b]pyridine (1 g, 6.02 mmol) in MeOH (20 mL) was added Raney-Ni (360 mg, 20% w.t).
  • Step 2 Preparation of tert-butyl 4-(5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate.
  • Step 3 Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-5- methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 4 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-5-methyl-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 54 Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of tert-butyl (4-fluoropyridin-2-yl)carbamate.
  • Step 5 Preparation of 6-bromo-7-fluoro-2,8-dimethylimidazo[1,2-a]pyridine.
  • IPA 140 mL
  • 1-bromo-2,2-dimethoxypropane 25 g, 136.61 mmol
  • PPTS PPTS
  • Step 8 Preparation of tert-butyl 4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Example 55 Preparation of N-(1-methyl-1H-indol-3-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl 4-(1-((1-methyl-1H-indol-3-yl)carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 2 Preparation of N-(1-methyl-1H-indol-3-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 56 Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-6-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of 6-methyl-1H-pyrrolo[2,3-b]pyridine 7-oxide.
  • m-CPBA 5877 mg, 34.05 mmol
  • Step 2 Preparation of 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine.
  • 6-methyl-1H-pyrrolo[2,3-b]pyridine 7-oxide 3 g, 20.27 mmol
  • MsCl 6.97 g, 60.81 mmol
  • the mixture was stirred at 75 o C for 16 h. After cooling down to r.t, the mixture was diluted with water (100 mL) and extracted EtOAc (50 mL*3). The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated in vacuo.
  • Step 5 Preparation of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-6- methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 6 Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-6-methyl-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-6-methyl-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate 90 mg, 0.17 mmol
  • DCM 1.5 mL
  • TFA 1.5 mL
  • Example 57 Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of methyl 6-bromo-2-methylimidazo[1,2-a]pyridine-7-carboxylate.
  • Step 3 Preparation of 6-bromo-2-methylimidazo[1,2-a]pyridine-7-carbaldehyde.
  • 6-bromo-2-methylimidazo[1,2-a]pyridin-7-yl)methanol (14.5 g, 0.06 mol) in DCM (200 mL) was added MnO 2 (26.3 g, 0.302 mmol), the mixture was stirred at 45 o C for 16 h.
  • Step 7 Preparation of tert-butyl 4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 1 Preparation of tert-butyl 7-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate.
  • Step 2 Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Example 59 Preparation of N-(4-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine.
  • Step 3 Preparation of tert-butyl 4-(1-((4-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 4 Preparation of N-(4-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 60 Preparation of N-(1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl 4-(1-((1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 2 Preparation of N-(1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 61 Preparation of 4-(piperazin-1-yl)-N-(6-(trifluoromethyl)-2H-indazol-5-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of 4-bromo-2-methyl-5-(trifluoromethyl)aniline.
  • a mixture of 2-methyl-5-(trifluoromethyl)aniline (33 g, 188.57 mmol) in ACN (400 mL) was added NBS (33.6 g, 188.57 mmol) at 0 o C. The mixture was stirred at r.t for 2 h.
  • Step 4 Preparation of N-(2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine.
  • N-(2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine [0478] To a solution of 5-bromo-2-methyl-6-(trifluoromethyl)-2H-indazole (2 g, 7.17 mmol) in 1,4-dioxane (20 mL) were added diphenylmethanimine (1.95 g, 10.75 mmol), Cs 2 CO 3 (7.01 g, 21.5 mmol), Pd(OAc) 2 (161 mg, 0.71 mmol) and BIANP (893 mg, 1.43 mmol).
  • Step 6 Preparation of N-(2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine.
  • Step 8 Preparation of 4-(piperazin-1-yl)-N-(6-(trifluoromethyl)-2H-indazol-5-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 62 Preparation of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 7 Preparation of tert-butyl 4-(1-((3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 8 Preparation of N-(3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 64 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(2,6- diazaspiro[3.3]heptan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl 6-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- diazaspiro[3.3]heptane-2-carboxylate.
  • Step 2 Preparation of tert-butyl 6-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-diazaspiro[3.3]heptane-2-carboxylate.
  • Step 3 Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(2,6-diazaspiro[3.3]heptan- 2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 3 Preparation of 7-bromo-5-chloro-6-fluoro-1H-indazole.
  • 2-bromo-4-chloro-3-fluoro-6-methylaniline (1 g, 4.20 mmol) in AcOH (10 mL) was added NaNO 2 (290 mg, 4.20 mmol) in H 2 O (3 mL). The resulting mixture was stirred at RT for 17 h. The mixture was pour into ice-water (10 mL), extracted with EA (10 mL ⁇ 3).
  • Step 6 Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine.
  • 5-chloro-6-fluoro-2,7-dimethyl-2H-indazole 880 mg, 4.44 mmol
  • diphenylmethanimine (1207 mg, 6.67 mmol)
  • BINAP 555 mg, 0.88 mmol
  • Pd(OAc) 2 99 mg, 0.44 mmol
  • Cs 2 CO 3 4329 mg, 13.32 mmol
  • Step 9 Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(4,7-diazaspiro [2.5] octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 66 Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl 4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate.
  • Step 2 Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 67 Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of tert-butyl 7-(1-((2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate.
  • Step 2 Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 69 Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • step 1 100o C, 16h, N2 step 2 sep step 5
  • Step 1 Preparation of 6-bromo-2-ethyl-8-fluoroimidazo[1,2-a]pyridine.
  • Step 2 Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine.
  • N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine [0511] To a solution of 6-bromo-2-ethyl-8-fluoroimidazo[1,2-a]pyridine (1 g, 4.11 mmol) in 1,4-dioxane (20 mL) were added diphenylmethanimine (890 mg, 4.94 mmol), Pd(OAc) 2 (90 mg, 0.41 mmol), BINAP (510 mg, 0.82 mmol) and Cs 2 CO 3 (4.02 g, 12.30 mmol).
  • Step 5 Preparation of tert-butyl 7-(1-((2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate.
  • Step 6 Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Example 70 Preparation of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of 6-bromo-8-fluoroimidazo[1,2-a]pyridine.
  • 5-bromo-3-fluoropyridin-2-amine 5 g, 26.18 mmol
  • EtOH 80 mL
  • 2-chloroacetaldehyde 3.06 g, 39.27 mmol
  • Step 5 Preparation of tert-butyl 7-(1-((8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate.
  • Example 71 Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of 5-bromo-4-fluoro-2-methyl-2H-indazole.
  • Step 4 Preparation of tert-butyl 7-(1-((4-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate.
  • Step 5 Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 72 Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of phenyl (2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamate.
  • Step 2 Preparation of tert-butyl 4-(1-((2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 3 Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 73 Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl 4-(1-((2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 2 Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 74 Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate.
  • Step 2 Preparation of tert-butyl (R)-4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate.
  • Step 3 Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Example 75 Preparation of (R)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of (R)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 2 Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 77 Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of tert-butyl (S)-4-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2-methylpiperazine-1-carboxylate.
  • Step 2 Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Step 1 Preparation of (S)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl (2R,6S)-4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate.
  • Step 2 Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
  • Example 80 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methyl-4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate.
  • Step 2 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
  • Step 3 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-methyl-4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
  • Example 81 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- ((3R,5S)-3,4,5-trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
  • Step 1 Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((3R,5S)-3,4,5- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.

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Abstract

The present disclosure relates to compounds of Formula (I) or subformulas thereof: (I) and pharmaceutically acceptable salts thereof, and their uses in treating PMS1 -associated diseases and disorders.

Description

2,3-DIHYDROPYROLLOPYRIDINE CARBOXAMIDE COMPOUNDS AND METHODS OF USE THEREOF CROSS-REFERENCE TO RELATED APPLICATION [001] This application claims the benefit of and priority to U.S. Provisional Patent Application No.63/601,947, filed on November 22, 2023, which is incorporated by reference in its entirety herein. BACKGROUND [002] More than 90% of human genes produce multiple mature transcripts via alternative splicing. This process is essential for generating different transcripts in different cell and tissue types, during the developmental process, and in response to internal and external signals. Alternative splicing are prevalent not only for protein-coding genes but also for most other kinds of genes including microRNA genes and long noncoding genes. Splicing is carried out by the spliceosome. Small nuclear RNAs (snRNAs) are key components of the spliceosome. The major spliceosome comprises the U1, U2, U4, U5, and U6 snRNAs, and it catalyzes the removal of ~95% of human introns, while the remaining introns (called the U12-type of introns) are removed by the minor spliceosome, comprising the U11, U12, U4atac, U5, and U6atac snRNAs. These snRNAs are in complex with their respective protein partners to form the functional unit of small nuclear ribonucleoproteins (snRNPs). [003] Splicing is a highly regulated process, with the regulation exerted by both cis- elements and trans-factors. The cis-elements that are recognized by the snRNAs include the 5’-splice site, 3’-splice site, and the branchpoint, each of these associating with a sequence motif that is recognized by a component of the spliceosome. In addition, there are intronic splicing enhancers (ISE), intronic splicing silencer (ISS), exonic splicing enhancer (ESE), and exonic splicing enhancer (ESS), which are recognized by a myriad of trans-factors commonly known as RNA-binding proteins (RBPs). Some of these RBPs directly bind to the cis-elements in a sequencing-specific way, while other RBPs recognize RNA structures (e.g., RNA duplex or unpaired loop region), yet others function via protein-protein interaction. There are ~1600 RBPs annotated in the human genome, and they are expressed in a cell-type- specific manner and form an extensive regulatory network for splicing regulation. [004] Dysregulation of splicing is implicated in roughly half of human diseases. Some diseases are caused by mutations in the spliceosome components or RBPs, while others by mutations in the cis-elements such as splice sites, branchpoint, or the various splicing enhancers and silencers. Although current approaches to treating these diseases, such as CRISPR-based genome editing, virus-aided gene therapy, or a variety of oligonucleotide- based technologies, continue to improve, they still suffer major technical and clinical challenges. In particular, oligonucleotide-based therapeutics show unfavorable pharmacokinetics, can not be orally administered, and can not be delivered effectively to many tissues, especially the brain. Small-molecule drugs have excellent pharmacokinetics, effective delivery, and bioavailability, and have only recently become available for modulating RNA splicing. Yet, the currently molecules come from a few limited chemical series. Thus, there is a great need to develop additional small molecule splicing modulators (SMSMs). [005] Almost 50 inherited disorders in humans result from an increase in the number of copies of single repeats in genomic DNA. These DNA repeats appear to be predisposed to such expansion because they have unusual structural characteristics, which disrupt cellular replication, repair, and recombination machinery. The presence of expanding DNA repeats alters gene expression in human cells, leading to disease. [006] One of these inherited disorders is Huntington's disease (HD). HD is a deadly neurodegenerative disorder with no cure associated with cognitive impairment, dementia, and loss of motor coordination. It is characterized by the progressive and hereditary increase in the length of the CAG trinucleotide repeats that encode a stretch of polyglutamine, in the Huntington gene (HTT) coding region. These repeats can increase in number from one generation to the next. The normal allele of the HTT gene contains fewer than 36 CAG repeats, while the mutant allele contains more than 36 repeats. Most HD patients carry one normal allele and one mutant allele that causes the disease. Functionally, the aberrant accumulation of CAG repeats is believed to confer a toxic gain of function on the mutant HD protein, causing it to aggregate, form protein deposits (ie, inclusion bodies), and induce cell death. The severity of the disease generally reflects the extent of repeat expansion in the mutant HTT protein. [007] Myotonic dystrophy type 1 (DM1) and type 2 (DM2) are associated with long repeats of polyCUG and polyCCUG in the 3'-UTR and intron 1 regions of the transcription of myotonic dystrophy protein kinase (DMPK) and protein 9 of zinc finger (ZNF9), respectively. While normal individuals have up to 30 CTG repeats, DMI patients have a higher number of repeats ranging from 50 to thousands. The severity of the disease and the age of onset correlate with the number of repetitions. Adult-onset patients show milder symptoms and have fewer than 100 repeats, juvenile-onset DM1 patients have up to 500 repeats, and congenital cases typically have around 1,000 CTG repeats. Expanded transcripts containing CUG repeats form a secondary structure, accumulate in the nucleus as nuclear foci, and sequester RNA-binding proteins (RNA-BP). [008] Besides the extra copies of repeats inherited at birth, for many repeat expansion diseases, repeats are highly unstable and their repeat numbers continue to expand throughout the life time of patients. This repeat instability has been shown experimentally to be mediated by proteins in DNA mismatch repair (MMR) processes including PMS1, MLH1, MSH3. Human genetics data from genome-wide association studies has indicated that variants in MMR proteins are associated with clinically relevant HD symptomatology including age at motor onset, rate of progression and somatic instability. Knocking down and knocking out MMR genes have been shown to stall or slow the somatic repeat expansion in various preclinical models of repeat expansion diseases. SUMMARY [009] Provided herein are small molecule splicing modulators (SMSMs), which can be used to treat a wide variety of diseases, including neurodegenerative and repeat expansion diseases. These SMSMs target regions of a primary RNA transcript that are cis-elements, such as splice sites, branch points, splicing enhancers, or splicing silencers. These regions may contain unpaired nucleotides in an RNA duplex, called bulges, which may occur naturally or result from disease. [010] When the SMSMs come into contact with an RNA transcript, the RNA transcript may be bound by the spliceosome or the other trans-factors, most notably RNA-binding proteins (RBPs). The SMSMs reported herein may cause an alteration in the sequence or abundance of the mature transcript, which may, in turn, alter the sequence or abundance of the functional protein should the transcript be protein-coding, or the sequence or abundance of the functional RNA should the transcript be non-coding. [011] In one aspect, provided herein is a compound of formula (I),
Figure imgf000005_0001
or a pharmaceutically acceptable salt thereof, wherein Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; each R1 is independently selected from halogen, -CN, C1-6alkyl, C1-6haloalkyl, C1-6alkoxy, C3- 6cycloalkyl, and 5-8 memebered heteroaryl; each R2 is independently selected from halogen and C1-6alkyl; R3 is selected from H and C1-6alkyl; each Ra is independently selected from the group consisting of halogen, -OH, C1-6alkyl, C1- 6haloalkyl, oxo, C3-6cycloalkyl, -C(O)O-C1-6alkyl, -C(O)C1-6haloalkyl, -C(O)O-C1- 6alkylene-OC(O)-C1-6alkyl, and -N(RcRd), wherein the C1-6alkyl is optionally substituted with -OH, C1-6alkoxy, C3-6cycloalkyl, -N(RcRd), or -S(O)2C1-6alkyl, or two Ra attached to the same carbon atom, together with carbon atom to which they are attached, combine to form a C3-6cycloalkyl; each Rb is independently selected from the group consisting of halogen, -OH, -CN, C1-6alkyl, C1-6haloalkyl, C1-6 alkoxy, C1-6haloalkoxy, and C3-6cycloalkyl, wherein the C1-6 alkoxy is optionally substituted with C3-6cycloalkyl; each Rc is independently selected from H, C1-6alkyl, and C3-6cycloalkyl, wherein the C1-6alkyl is optionally substituted with -OH; each Rd is independently selected from H and C1-6alkyl; m is 0, 1, or 2; n is 0, 1, or 2; p is 0, 1, 2, 3, or 4; and q is 0, 1, 2, 3, or 4. [012] In some embodiments, the compound is a compound of formula (Ia),
Figure imgf000006_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, 2, or 3; and the rest of the variables are as defined herein. [013] In some embodiments, the compound is a compound of formula (Ib),
Figure imgf000006_0002
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein. [014] In some embodiments, the compound is a compound of formula (Ic),
Figure imgf000006_0003
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein. [015] In some embodiments, the compound is a compound formula (Id),
Figure imgf000007_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined in herein. [016] In another aspect, the present disclosure provides a compound obtainable by, or obtained by, a method for preparing a compound as described here (e.g., a method comprising one or more steps described in herein). [017] In another aspect, the present disclosure provides a pharmaceutical composition comprising a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)), or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable diluent or carrier. [018] In another aspect, the present disclosure provides an intermediate as described herein, being suitable for use in a method for preparing a compound as described herein (e.g., the intermediate is selected from the intermediates described herein). [019] In another aspect, the present disclosure provides a method of treating or preventing a disease or disorder disclosed herein in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of the present disclosure. [020] In another aspet, the present disclosure provides a method of treating a disease or disorder disclosed herein in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of the present disclosure. [021] In another aspect, the present disclosure provides a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof for use in treating or preventing a disease or disorder disclosed herein. [022] In another aspect, the present disclosure provides a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof for use in treating a disease or disorder disclosed herein. [023] In another aspect, the present disclosure provides use of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof for treating or preventing a disease or disorder disclosed herein. [024] In another aspect, the present disclosure provides use of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof for treating a disease or disorder disclosed herein. [025] In another aspect, the present disclosure provides use of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof in the manufacture of a medicament for treating or preventing a disease or disorder disclosed herein. [026] In another aspect, the present disclosure provides use of a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)) or a pharmaceutically acceptable salt thereof in the manufacture of a medicament for treating a disease or disorder disclosed herein. [027] In another aspect, the present disclosure provides a method of preparing a compound of the present disclosure (e.g., a compound formula (I), (Ia), (Ib), (Ic), or (Id)). [028] In another aspect, the present disclosure provides a method of preparing a compound, comprising one or more steps described herein. [029] Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure belongs. Although methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present disclosure, suitable methods and materials are described below. All publications, patent applications, patents, and other references mentioned herein are incorporated by reference in their entirety. In the case of conflict, the present specification, including definitions, will control. In addition, the materials, methods, and examples are illustrative only and are not intended to be limiting. [030] Other features and advantages of the disclosure will be apparent from the following detailed description and claims. DETAILED DESCRIPTION [031] Compounds described herein are generally designed to treat diseases and disorders disclosed herein. Definitions [032] Unless otherwise stated, the following terms used in the specification and claims have the following meanings set out below. [033] As used herein, “alkyl”, “C1, C2, C3, C4, C5, C6 alkyl” or “C1-6 alkyl” is intended to include C1, C2, C3, C4, C5, or C6 straight chain (linear) saturated aliphatic hydrocarbon groups and C3, C4, C5, or C6 branched saturated aliphatic hydrocarbon groups. For example, C1-6 alkyl is intended to include C1, C2, C3, C4, C5, and C6 alkyl groups. Examples of alkyl include, moieties having from one to six carbon atoms, such as, but not limited to, methyl, ethyl, n-propyl, i-propyl, n-butyl, s-butyl, t-butyl, n-pentyl, i-pentyl, or n-hexyl. In some embodiments, a straight chain or branched alkyl has four or fewer carbon atoms. [034] As used herein, the term “alkoxy” refers to the group -OR where R is linear or branched alkyl. When the term “alkoxy” is modified with a designated number of carbon atoms (e.g., C1-6 alkoxy) the number of carbon atoms refers to the number of carbon atoms in the linear or branched alkyl R. Particular alkoxy groups are methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, tert-butoxy, sec-butoxy, n-pentoxy, n-hexoxy, and 1,2- dimethylbutoxy. Particular alkoxy groups are lower alkoxy, i.e., with between 1 and 6 carbon atoms (“C1-6 alkoxy”). [035] As used herein, the term “cycloalkyl” refers to a saturated hydrocarbon monocyclic or polycyclic (e.g., fused, bridged, or spiro rings) system having 3 to 30 carbon atoms (e.g., C3- 12, C3-10, or C3-8). Examples of cycloalkyl include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, and adamantyl. Particular cycloalkyl groups are lower cycloalkyl, e.g., with between 3 and 6 carbon atoms (“C3-6 cycloalkyl”). [036] As used herein, the term “heterocyclyl” refers to a saturated or partially unsaturated 3- 8 membered monocyclic (e.g., 4-7 membered monocyclic) or 7-12 membered bicyclic (fused, bridged, or spiro rings) having one or more heteroatoms e.g., 1 or 1-2 or 1-3 or 1-4 or 1-5 or 1-6 heteroatoms, or e.g. ̧1, 2, 3, 4, 5, or 6 heteroatoms, independently selected from the group consisting of nitrogen, oxygen and sulphur, unless specified otherwise. Examples of heterocycloalkyl groups include, but are not limited to, piperidinyl, piperazinyl, pyrrolidinyl, dioxanyl, tetrahydrofuranyl, isoindolinyl, indolinyl, imidazolidinyl, pyrazolidinyl, oxazolidinyl, isoxazolidinyl, triazolidinyl, oxiranyl, azetidinyl, oxetanyl, thietanyl, 1,2,3,6- tetrahydropyridinyl, tetrahydropyranyl, dihydropyranyl, pyranyl, morpholinyl, tetrahydrothiopyranyl, 1,4-diazepanyl, 1,4-oxazepanyl, 2-oxa-5-azabicyclo[2.2.1]heptanyl, 2,5-diazabicyclo[2.2.1]heptanyl, 2-oxa-6-azaspiro[3.3]heptanyl, 2,6-diazaspiro[3.3]heptanyl, 1,4-dioxa-8-azaspiro[4.5]decanyl, 1,4-dioxaspiro[4.5]decanyl, 1-oxaspiro[4.5]decanyl, 1- azaspiro[4.5]decanyl, 3'H-spiro[cyclohexane-1,1'-isobenzofuran]-yl, 7'H-spiro[cyclohexane- 1,5'-furo[3,4-b]pyridin]-yl, 3'H-spiro[cyclohexane-1,1'-furo[3,4-c]pyridin]-yl, 3- azabicyclo[3.1.0]hexanyl, 3-azabicyclo[3.1.0]hexan-3-yl, 1,4,5,6-tetrahydropyrrolo[3,4- c]pyrazolyl, 3,4,5,6,7,8-hexahydropyrido[4,3-d]pyrimidinyl, 4,5,6,7-tetrahydro-1H- pyrazolo[3,4-c]pyridinyl, 5,6,7,8-tetrahydropyrido[4,3-d]pyrimidinyl, 2- azaspiro[3.3]heptanyl, 2-methyl-2-azaspiro[3.3]heptanyl, 2-azaspiro[3.5]nonanyl, 2-methyl- 2-azaspiro[3.5]nonanyl, 2-azaspiro[4.5]decanyl, 2-methyl-2-azaspiro[4.5]decanyl, 2-oxa- azaspiro[3.4]octanyl, 2-oxa-azaspiro[3.4]octan-6-yl, and the like. In the case of multicyclic heterocycloalkyl, only one of the rings in the heterocycloalkyl needs to be non-aromatic (e.g., 4,5,6,7-tetrahydrobenzo[c]isoxazolyl). [037] As used herein, the term “heteroaryl” is intended to include a stable 5-, 6-, or 7- membered monocyclic or 7-, 8-, 9-, 10-, 11- or 12-membered bicyclic aromatic heterocyclic ring (e.g., an 8-12 membered bicyclic aromatic heterocyclic ring) which consists of carbon atoms and one or more heteroatoms, e.g., 1 or 1-2 or 1-3 or 1-4 or 1-5 or 1-6 heteroatoms, or e.g. ̧1, 2, 3, 4, 5, or 6 heteroatoms, independently selected from the group consisting of nitrogen, oxygen and sulphur. The nitrogen atom may be substituted or unsubstituted (i.e., N or NR wherein R is H or other substituents, as defined). The nitrogen and sulphur heteroatoms may optionally be oxidised (i.e., N→O and S(O)r, where r = 1 or 2). Examples of heteroaryl groups include pyrrole, furan, thiophene, thiazole, isothiazole, imidazole, triazole, tetrazole, pyrazole, oxazole, isoxazole, pyridine, pyrazine, pyridazine, pyrimidine, and the like. Heteroaryl groups can also be fused or bridged with alicyclic or heterocyclic rings, which are not aromatic so as to form a multicyclic system (e.g., 4,5,6,7- tetrahydrobenzo[c]isoxazolyl). [038] Furthermore, the term “heteroaryl” includes multicyclic heteroaryl groups, e.g., tricyclic, bicyclic, e.g., benzoxazole, benzodioxazole, benzothiazole, benzoimidazole, benzothiophene, quinoline, isoquinoline, naphthrydine, indole, benzofuran, purine, benzofuran, deazapurine, indolizine. [039] Bicyclic and tricyclic systems can be edge-fused, spiro-fused, or bridged systems. [040] As used herein, the term “substituted,” means that any one or more hydrogen atoms on the designated atom is replaced with a selection from the indicated groups, provided that the designated atom’s normal valency is not exceeded, and that the substitution results in a stable compound. For substituted groups containing one or more heteroatoms (e.g., substituted heterocyclyl or substituted heteroaryl), the heteroatoms may be substituted provided that the heteroatoms’ normal valencies are not exceeded. When a substituent is oxo or keto (i.e., =O), then 2 hydrogen atoms on the atom are replaced. Keto substituents are not present on aromatic moieties. Ring double bonds, as used herein, are double bonds that are formed between two adjacent ring atoms (e.g., C=C, C=N or N=N). “Stable compound” and “stable structure” are meant to indicate a compound that is sufficiently robust to survive isolation to a useful degree of purity from a reaction mixture, and formulation into an efficacious therapeutic agent. [041] When a bond to a substituent is shown to cross a bond connecting two atoms in a ring, then such substituent may be bonded to any carbon atom or heteroatom in the ring, provided that the carbon atom or heteroatom’s normal valency is not exceeded. Unless specified otherwise, it is assumed that the substituent replaces a hydrogen atom of the substituted atom. When a substituent is listed without indicating the atom via which such substituent is bonded to the rest of the compound of a given formula, then such substituent may be bonded via any atom in such formula. Combinations of substituents and/or variables are permissible, but only if such combinations result in stable compounds. [042] When any variable (e.g., R) occurs more than one time in any constituent or formula for a compound, its definition at each occurrence is independent of its definition at every other occurrence. Thus, for example, if a group is shown to be substituted with 0-2 R moieties, then the group may optionally be substituted with up to two R moieties and R at each occurrence is selected independently from the definition of R. Also, combinations of substituents and/or variables are permissible, but only if such combinations result in stable compounds. [043] As used herein, the term “hydroxy” or “hydroxyl” includes groups with an -OH or -O-. [044] As used herein, the term “cyano” refers to the group -CN. [045] As used herein, the term “halo” or “halogen” refers to fluoro, chloro, bromo and iodo. [046] As used herein, the term “haloalkyl” refers to a branched or unbranched alkyl substituted with one or more halogens. For example, a C1-6 haloalkyl is an alkyl group of from one to six carbons wherein at least one H is substituted by a halogen. Examples of haloalkyl include but are not limited to CFH2, CF2H, CF3, CH2CF3, CF2CF3, C(F)(CH3)2, CH2CH2Br, CH(I)CH2F, and CH2Cl. [47] As used herein, the term “haloalkoxy” refers to alkoxy structures that are substituted with one or more halo groups or with combinations thereof. For example, the terms "fluoroalkyl" and "fluoroalkoxy" are haloalkyl and haloalkoxy groups, respectively, in which the halo is fluorine. [48] As used herein, the term “amino” refers to the radical -NH2. In certain embodiments as specified herein, one or both hydrogen atoms of -NH2 may be replaced with a different group, e.g., amino-C1-7alkyl. [49] As used herein, the expressions “one or more of A, B, or C,” “one or more A, B, or C,” “one or more of A, B, and C,” “one or more A, B, and C,” “selected from the group consisting of A, B, and C”, “selected from A, B, and C”, and the like are used interchangeably and all refer to a selection from a group consisting of A, B, and/or C, i.e., one or more As, one or more Bs, one or more Cs, or any combination thereof, unless indicated otherwise. [50] It is to be understood that the present disclosure provides methods for the synthesis of the compounds of any of the Formulae described herein (e.g., compounds formula (I), (Ia), (Ib), (Ic), or (Id)). The present disclosure also provides detailed methods for the synthesis of various disclosed compounds e.g., those shown in the Examples. [51] It is to be understood that, throughout the description, where compositions are described as having, including, or comprising specific components, it is contemplated that compositions also consist essentially of, or consist of, the recited components. Similarly, where methods or processes are described as having, including, or comprising specific process steps, the processes also consist essentially of, or consist of, the recited processing steps. Further, it should be understood that the order of steps or order for performing certain actions is immaterial so long as the invention remains operable. Moreover, two or more steps or actions can be conducted simultaneously. [52] It is to be understood that the synthetic processes of the disclosure can tolerate a wide variety of functional groups, therefore various substituted starting materials can be used. The processes generally provide the desired final compound at or near the end of the overall process, although it may be desirable in certain instances to further convert the compound to a pharmaceutically acceptable salt thereof. [53] It is to be understood that compounds of the present disclosure (e.g., compounds formula (I), (Ia), (Ib), (Ic), and (Id)) can be prepared in a variety of ways using commercially available starting materials, compounds known in the literature, or from readily prepared intermediates, by employing standard synthetic methods and procedures either known to those skilled in the art, or which will be apparent to the skilled artisan in light of the teachings herein. Standard synthetic methods and procedures for the preparation of organic molecules and functional group transformations and manipulations can be obtained from the relevant scientific literature or from standard textbooks in the field. Although not limited to any one or several sources, classic texts such as Smith, M. B., March, J., March’s Advanced Organic Chemistry: Reactions, Mechanisms, and Structure, 5th edition, John Wiley & Sons: New York, 2001; Greene, T.W., Wuts, P.G. M., Protective Groups in Organic Synthesis, 3rd edition, John Wiley & Sons: New York, 1999; R. Larock, Comprehensive Organic Transformations, VCH Publishers (1989); L. Fieser and M. Fieser, Fieser and Fieser’s Reagents for Organic Synthesis, John Wiley and Sons (1994); and L. Paquette, ed., Encyclopedia of Reagents for Organic Synthesis, John Wiley and Sons (1995), incorporated by reference herein, are useful and recognised reference textbooks of organic synthesis known to those in the art [054] One of ordinary skill in the art will note that, during the reaction sequences and synthetic schemes described herein, the order of certain steps may be changed, such as the introduction and removal of protecting groups. One of ordinary skill in the art will recognise that certain groups may require protection from the reaction conditions via the use of protecting groups. Protecting groups may also be used to differentiate similar functional groups in molecules. A list of protecting groups and how to introduce and remove these groups can be found in Greene, T.W., Wuts, P.G. M., Protective Groups in Organic Synthesis, 3rd edition, John Wiley & Sons: New York, 1999. [055] It is to be understood that, unless otherwise stated, any description of a method of treatment includes use of the compounds to provide such treatment or prophylaxis as is described herein, as well as use of the compounds to prepare a medicament to treat or prevent such condition. It is to be understood that, unless otherwise stated, any description of a method of treatment includes use of the compounds to provide such treatment or prophylaxis as is described herein, as well as use of the compounds to prepare a medicament to treat such condition. The treatment includes treatment of human or non-human animals including rodents and other disease models. [056] As used herein, the terms “individual,” “patient,” or “subject” are used interchangeably and include any animal, including mammals, preferably mice, rats, other rodents, rabbits, dogs, cats, swine, cattle, sheep, horses, or primates, and most preferably humans. The compounds of the disclosure can be administered to a mammal, such as a human, but can also be other mammals such as an animal in need of veterinary treatment, e.g., domestic animals (e.g., dogs, cats, and the like), farm animals (e.g., cows, sheep, pigs, horses, and the like) and laboratory animals (e.g., rats, mice, guinea pigs, and the like). [057] As used herein, the term “treating” or “treat” includes any effect, e.g., lessening, reducing, modulating, or eliminating, that results in the improvement of the condition, disease, disorder and the like. [058] It is to be understood that a compound of the present disclosure, or a pharmaceutically acceptable salt or solvate thereof, can or may also be used to prevent a relevant disease, condition or disorder, or used to identify suitable candidates for such purposes. [059] As used herein, the term “preventing,” “prevent,” or “protecting against” describes reducing or eliminating the onset of the symptoms or complications of such disease, condition or disorder. [060] It is to be understood that one skilled in the art may refer to general reference texts for detailed descriptions of known techniques discussed herein or equivalent techniques. These texts include Ausubel et al., Current Protocols in Molecular Biology, John Wiley and Sons, Inc. (2005); Sambrook et al., Molecular Cloning, A Laboratory Manual (3rd edition), Cold Spring Harbor Press, Cold Spring Harbor, New York (2000); Coligan et al., Current Protocols in Immunology, John Wiley & Sons, N.Y.; Enna et al., Current Protocols in Pharmacology, John Wiley & Sons, N.Y.; Fingl et al., The Pharmacological Basis of Therapeutics (1975), Remington's Pharmaceutical Sciences, Mack Publishing Co., Easton, PA, 18th edition (1990). These texts can, of course, also be referred to in making or using an aspect of the disclosure. [061] It is to be understood that the present disclosure also provides pharmaceutical compositions comprising any compound described herein (e.g., a compound formula (I), (Ia), (Ib), or (Ic)) in combination with at least one pharmaceutically acceptable excipient or carrier. [062] As used herein, the term “pharmaceutical composition” is a formulation containing the compounds of the present disclosure (e.g., compounds formula (I), (Ia), (Ib), or (Ic)) in a form suitable for administration to a subject. In one embodiment, the pharmaceutical composition is in bulk or in unit dosage form. The unit dosage form is any of a variety of forms, including, for example, a capsule, an IV bag, a tablet, a single pump on an aerosol inhaler or a vial. The quantity of active ingredient (e.g., a formulation of the disclosed compound or salt, hydrate, solvate or isomer thereof) in a unit dose of composition is an effective amount and is varied according to the particular treatment involved. One skilled in the art will appreciate that it is sometimes necessary to make routine variations to the dosage depending on the age and condition of the subject. The dosage will also depend on the route of administration. A variety of routes are contemplated, including oral, pulmonary, rectal, parenteral, transdermal, subcutaneous, intravenous, intramuscular, intraperitoneal, inhalational, buccal, sublingual, intrapleural, intrathecal, intranasal, and the like. Dosage forms for the topical or transdermal administration of a compound of this disclosure include powders, sprays, ointments, pastes, creams, lotions, gels, solutions, patches and inhalants. In one embodiment, the active compound is mixed under sterile conditions with a pharmaceutically acceptable carrier, and with any preservatives, buffers, or propellants that are required. [063] As used herein, the term “pharmaceutically acceptable” refers to those compounds, anions, cations, materials, compositions, carriers, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings and animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio. [064] As used herein, the term “pharmaceutically acceptable excipient” means an excipient that is useful in preparing a pharmaceutical composition that is generally safe, non-toxic and neither biologically nor otherwise undesirable, and includes excipient that is acceptable for veterinary use as well as human pharmaceutical use. A “pharmaceutically acceptable excipient” as used in the specification and claims includes both one and more than one such excipient. [065] It is to be understood that a pharmaceutical composition of the disclosure is formulated to be compatible with its intended route of administration. Examples of routes of administration include parenteral, e.g., intravenous, intradermal, subcutaneous, oral (e.g., ingestion), inhalation, transdermal (topical), and transmucosal administration. Solutions or suspensions used for parenteral, intradermal, or subcutaneous application can include the following components: a sterile diluent such as water for injection, saline solution, fixed oils, polyethylene glycols, glycerine, propylene glycol or other synthetic solvents; antibacterial agents such as benzyl alcohol or methyl parabens; antioxidants such as ascorbic acid or sodium bisulphite; chelating agents such as ethylenediaminetetraacetic acid; buffers such as acetates, citrates or phosphates, and agents for the adjustment of tonicity such as sodium chloride or dextrose. The pH can be adjusted with acids or bases, such as hydrochloric acid or sodium hydroxide. The parenteral preparation can be enclosed in ampoules, disposable syringes or multiple dose vials made of glass or plastic. [066] It is to be understood that a compound or pharmaceutical composition of the disclosure can be administered to a subject in many of the well-known methods currently used for chemotherapeutic treatment. For example, a compound of the disclosure may be injected into the blood stream or body cavities or taken orally or applied through the skin with patches. The dose chosen should be sufficient to constitute effective treatment but not so high as to cause unacceptable side effects. The state of the disease condition (e.g., a disease or disorder disclosed herein) and the health of the subject should preferably be closely monitored during and for a reasonable period after treatment. [067] As used herein, the term “therapeutically effective amount” means the amount of the subject compound that will elicit the biological or medical response of a tissue, system, animal or human that is being sought by the researcher, veterinarian, medical doctor or other clinician. Altneratively, a therapeutically effective amount of a compound is the quantity required to achieve a desired therapeutic and/or prophylactic effect. [068] It is to be understood that, for any compound, the therapeutically effective amount can be estimated initially either in cell culture assays, e.g., of neoplastic cells, or in animal models, usually rats, mice, rabbits, dogs, or pigs. The animal model may also be used to determine the appropriate concentration range and route of administration. Such information can then be used to determine useful doses and routes for administration in humans. Therapeutic/prophylactic efficacy and toxicity may be determined by standard pharmaceutical procedures in cell cultures or experimental animals, e.g., ED50 (the dose therapeutically effective in 50% of the population) and LD50 (the dose lethal to 50% of the population). The dose ratio between toxic and therapeutic effects is the therapeutic index, and it can be expressed as the ratio, LD50/ED50. Pharmaceutical compositions that exhibit large therapeutic indices are preferred. The dosage may vary within this range depending upon the dosage form employed, sensitivity of the subject, and the route of administration. [069] Dosage and administration are adjusted to provide sufficient levels of the active agent(s) or to maintain the desired effect. Factors which may be taken into account include the severity of the disease state, general health of the subject, age, weight, and gender of the subject, diet, time and frequency of administration, drug combination(s), reaction sensitivities, and tolerance/response to therapy. [070] The pharmaceutical compositions containing active compounds of the present disclosure may be manufactured in a manner that is generally known, e.g., by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping, or lyophilising processes. Pharmaceutical compositions may be formulated in a conventional manner using one or more pharmaceutically acceptable carriers comprising excipients and/or auxiliaries that facilitate processing of the active compounds into preparations that can be used pharmaceutically. Of course, the appropriate formulation is dependent upon the route of administration chosen. [071] Pharmaceutical compositions suitable for injectable use include sterile aqueous solutions (where water soluble) or dispersions and sterile powders for the extemporaneous preparation of sterile injectable solutions or dispersion. For intravenous administration, suitable carriers include physiological saline, bacteriostatic water, Cremophor EL^ (BASF, Parsippany, N.J.) or phosphate buffered saline (PBS). In all cases, the composition must be sterile and should be fluid to the extent that easy syringeability exists. It must be stable under the conditions of manufacture and storage and must be preserved against the contaminating action of microorganisms such as bacteria and fungi. The carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. The proper fluidity can be maintained, for example, by the use of a coating such as lecithin, by the maintenance of the required particle size in the case of dispersion and by the use of surfactants. Prevention of the action of microorganisms can be achieved by various antibacterial and antifungal agents, for example, parabens, chlorobutanol, phenol, ascorbic acid, thimerosal, and the like. In many cases, it will be preferable to include isotonic agents, for example, sugars, polyalcohols such as mannitol and sorbitol, and sodium chloride in the composition. Prolonged absorption of the injectable compositions can be brought about by including in the composition an agent which delays absorption, for example, aluminum monostearate and gelatin. [072] Sterile injectable solutions can be prepared by incorporating the active compound in the required amount in an appropriate solvent with one or a combination of ingredients enumerated above, as required, followed by filtered sterilisation. Generally, dispersions are prepared by incorporating the active compound into a sterile vehicle that contains a basic dispersion medium and the required other ingredients from those enumerated above. In the case of sterile powders for the preparation of sterile injectable solutions, methods of preparation are vacuum drying and freeze-drying that yields a powder of the active ingredient plus any additional desired ingredient from a previously sterile-filtered solution thereof. [073] Oral compositions generally include an inert diluent or an edible pharmaceutically acceptable carrier. They can be enclosed in gelatin capsules or compressed into tablets. For the purpose of oral therapeutic administration, the active compound can be incorporated with excipients and used in the form of tablets, troches, or capsules. Oral compositions can also be prepared using a fluid carrier for use as a mouthwash, wherein the compound in the fluid carrier is applied orally and swished and expectorated or swallowed. Pharmaceutically compatible binding agents, and/or adjuvant materials can be included as part of the composition. The tablets, pills, capsules, troches and the like can contain any of the following ingredients, or compounds of a similar nature: a binder such as microcrystalline cellulose, gum tragacanth or gelatin; an excipient such as starch or lactose, a disintegrating agent such as alginic acid, Primogel, or corn starch; a lubricant such as magnesium stearate or Sterotes; a glidant such as colloidal silicon dioxide; a sweetening agent such as sucrose or saccharin; or a flavoring agent such as peppermint, methyl salicylate, or orange flavoring. [074] For administration by inhalation, the compounds are delivered in the form of an aerosol spray from pressured container or dispenser, which contains a suitable propellant, e.g., a gas such as carbon dioxide, or a nebuliser. [075] Systemic administration can also be by transmucosal or transdermal means. For transmucosal or transdermal administration, penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art, and include, for example, for transmucosal administration, detergents, bile salts, and fusidic acid derivatives. Transmucosal administration can be accomplished through the use of nasal sprays or suppositories. For transdermal administration, the active compounds are formulated into ointments, salves, gels, or creams as generally known in the art. [076] The active compounds can be prepared with pharmaceutically acceptable carriers that will protect the compound against rapid elimination from the body, such as a controlled release formulation, including implants and microencapsulated delivery systems. Biodegradable, biocompatible polymers can be used, such as ethylene vinyl acetate, polyanhydrides, polyglycolic acid, collagen, polyorthoesters, and polylactic acid. Methods for preparation of such formulations will be apparent to those skilled in the art. The materials can also be obtained commercially from Alza Corporation and Nova Pharmaceuticals, Inc. Liposomal suspensions (including liposomes targeted to infected cells with monoclonal antibodies to viral antigens) can also be used as pharmaceutically acceptable carriers. These can be prepared according to methods known to those skilled in the art, for example, as described in U.S. Pat. No. 4,522,811. [077] It is especially advantageous to formulate oral or parenteral compositions in dosage unit form for ease of administration and uniformity of dosage. Dosage unit form as used herein refers to physically discrete units suited as unitary dosages for the subject to be treated; each unit containing a predetermined quantity of active compound calculated to produce the desired therapeutic effect in association with the required pharmaceutical carrier. The specification for the dosage unit forms of the disclosure are dictated by and directly dependent on the unique characteristics of the active compound and the particular therapeutic effect to be achieved. [078] In therapeutic applications, the dosages of the pharmaceutical compositions used in accordance with the disclosure vary depending on the agent, the age, weight, and clinical condition of the recipient subject, and the experience and judgment of the clinician or practitioner administering the therapy, among other factors affecting the selected dosage. Generally, the dose should be sufficient to result in slowing, and preferably regressing, the symptoms of the disease or disorder disclosed herein and also preferably causing complete regression of the disease or disorder. An effective amount of a pharmaceutical agent is that which provides an objectively identifiable improvement as noted by the clinician or other qualified observer. Improvement in survival and growth indicates regression. As used herein, the term “dosage effective manner” refers to amount of an active compound to produce the desired biological effect in a subject or cell. [079] It is to be understood that the pharmaceutical compositions can be included in a container, pack, or dispenser together with instructions for administration. [080] It is to be understood that, for the compounds of the present disclosure being capable of further forming salts, all of these forms are also contemplated within the scope of the claimed disclosure. [081] As used herein, the term “pharmaceutically acceptable salts” refer to derivatives of the compounds of the present disclosure wherein the parent compound is modified by making acid or base salts thereof. Examples of pharmaceutically acceptable salts include, but are not limited to, mineral or organic acid salts of basic residues such as amines, alkali or organic salts of acidic residues such as carboxylic acids, and the like. The pharmaceutically acceptable salts include the conventional non-toxic salts or the quaternary ammonium salts of the parent compound formed, for example, from non-toxic inorganic or organic acids. For example, such conventional non-toxic salts include, but are not limited to, those derived from inorganic and organic acids selected from 2-acetoxybenzoic, 2-hydroxyethane sulphonic, acetic, ascorbic, benzene sulphonic, benzoic, bicarbonic, carbonic, citric, edetic, ethane disulphonic, 1,2-ethane sulphonic, fumaric, glucoheptonic, gluconic, glutamic, glycolic, glycollyarsanilic, hexylresorcinic, hydrabamic, hydrobromic, hydrochloric, hydroiodic, hydroxymaleic, hydroxynaphthoic, isethionic, lactic, lactobionic, lauryl sulphonic, maleic, malic, mandelic, methane sulphonic, napsylic, nitric, oxalic, pamoic, pantothenic, phenylacetic, phosphoric, polygalacturonic, propionic, salicylic, stearic, subacetic, succinic, sulphamic, sulphanilic, sulphuric, tannic, tartaric, toluene sulphonic, and the commonly occurring amine acids, e.g., glycine, alanine, phenylalanine, arginine, etc. [082] In some embodiments, the pharmaceutically acceptable salt is a sodium salt, a potassium salt, a calcium salt, a magnesium salt, a diethylamine salt, a choline salt, a meglumine salt, a benzathine salt, a tromethamine salt, an ammonia salt, an arginine salt, or a lysine salt. [083] Other examples of pharmaceutically acceptable salts include hexanoic acid, cyclopentane propionic acid, pyruvic acid, malonic acid, 3-(4-hydroxybenzoyl)benzoic acid, cinnamic acid, 4-chlorobenzenesulphonic acid, 2-naphthalenesulphonic acid, 4- toluenesulphonic acid, camphorsulphonic acid, 4-methylbicyclo-[2.2.2]-oct-2-ene-1- carboxylic acid, 3-phenylpropionic acid, trimethylacetic acid, tertiary butylacetic acid, muconic acid, and the like. The present disclosure also encompasses salts formed when an acidic proton present in the parent compound either is replaced by a metal ion, e.g., an alkali metal ion, an alkaline earth ion, or an aluminum ion; or coordinates with an organic base such as ethanolamine, diethanolamine, triethanolamine, tromethamine, N-methylglucamine, and the like. In the salt form, it is understood that the ratio of the compound to the cation or anion of the salt can be 1:1, or any ratio other than 1:1, e.g., 3:1, 2:1, 1:2, or 1:3. [084] It is to be understood that all references to pharmaceutically acceptable salts include solvent addition forms (solvates) as defined herein, of the same salt. [085] The compounds, or pharmaceutically acceptable salts thereof, are administered orally, nasally, transdermally, pulmonary, inhalationally, buccally, sublingually, intraperitoneally, subcutaneously, intramuscularly, intravenously, rectally, intrapleurally, intrathecally and parenterally. In one embodiment, the compound is administered orally. One skilled in the art will recognise the advantages of certain routes of administration. [086] A salt, for example, can be formed between an anion and a positively charged group (e.g., amino) on a substituted compound disclosed herein. Suitable anions include chloride, bromide, iodide, sulphate, bisulphate, sulphamate, nitrate, phosphate, citrate, methanesulphonate, trifluoroacetate, glutamate, glucuronate, glutarate, malate, maleate, succinate, fumarate, tartrate, tosylate, salicylate, lactate, naphthalenesulphonate, and acetate (e.g., trifluoroacetate). [87] It is to be understood that the compounds of the present disclosure, for example, the salts of the compounds, can exist in either hydrated or unhydrated (the anhydrous) form or as solvates with other solvent molecules. Nonlimiting examples of hydrates include monohydrates, dihydrates, etc. Nonlimiting examples of solvates include ethanol solvates, acetone solvates, etc. [88] As used herein, the term “solvate” means solvent addition forms that contain either stoichiometric or non-stoichiometric amounts of solvent. Some compounds have a tendency to trap a fixed molar ratio of solvent molecules in the crystalline solid state, thus forming a solvate. If the solvent is water the solvate formed is a hydrate; and if the solvent is alcohol, the solvate formed is an alcoholate. Hydrates are formed by the combination of one or more molecules of water with one molecule of the substance in which the water retains its molecular state as H2O. [89] As used herein, the term “derivative” refers to compounds that have a common core structure and are substituted with various groups as described herein. [90] It is also to be understood that certain compounds of any one of the Formulae disclosed herein may exist in solvated as well as unsolvated forms such as, for example, hydrated forms. A suitable pharmaceutically acceptable solvate is, for example, a hydrate such as hemi-hydrate, a mono-hydrate, a di-hydrate or a tri-hydrate. [91] Compounds of any one of the Formulae disclosed herein may exist in a number of different tautomeric forms and references to compounds of formula (I), (Ia), (Ib),(Ic), and (Id) include all such forms. For the avoidance of doubt, where a compound can exist in one of several tautomeric forms, and only one is specifically described or shown, all others are nevertheless embraced by formula (I), (Ia), (Ib), and (Ic). Examples of tautomeric forms include keto-, enol-, and enolate-forms, as in, for example, the following tautomeric pairs: keto/enol (illustrated below), imine/enamine, amide/imino alcohol, amidine/amidine, nitroso/ oxime, thioketone/enethiol, and nitro/aci-nitro.
Figure imgf000021_0001
keto enol enolate [092] Compounds of any one of the Formulae disclosed herein containing an amine function may also form N-oxides. A reference herein to a compound of formula (I), (Ia), (Ib), (Ic), and (Id) that contains an amine function also includes the N-oxide. Where a compound contains several amine functions, one or more than one nitrogen atom may be oxidised to form an N- oxide. Particular examples of N-oxides are the N-oxides of a tertiary amine or a nitrogen atom of a nitrogen-containing heterocycle. N-oxides can be formed by treatment of the corresponding amine with an oxidising agent such as hydrogen peroxide or a peracid (e.g. a peroxycarboxylic acid), see for example Advanced Organic Chemistry, by Jerry March, 4th Edition, Wiley Interscience, pages. More particularly, N-oxides can be made by the procedure of L. W. Deady (Syn. Comm. 1977, 7, 509-514) in which the amine compound is reacted with meta-chloroperoxybenzoic acid (mCPBA), for example, in an inert solvent such as dichloromethane. [093] The compounds of any one of the Formulae disclosed herein may be administered in the form of a prodrug which is broken down in the human or animal body to release a compound of the disclosure. A prodrug may be used to alter the physical properties and/or the pharmacokinetic properties of a compound of the disclosure. A prodrug can be formed when the compound of the disclosure contains a suitable group or substituent to which a property-modifying group can be attached. Examples of prodrugs include derivatives containing in vivo cleavable alkyl or acyl substitutents at the ester or amide group in any one of the Formulae disclosed herein. [094] As used herein, the term “isomerism” means compounds that have identical molecular formulae but differ in the sequence of bonding of their atoms or in the arrangement of their atoms in space. Isomers that differ in the arrangement of their atoms in space are termed “stereoisomers.” Stereoisomers that are not mirror images of one another are termed “diastereoisomers,” and stereoisomers that are non-superimposable mirror images of each other are termed “enantiomers” or sometimes optical isomers. A mixture containing equal amounts of individual enantiomeric forms of opposite chirality is termed a “racemic mixture.” [095] As used herein, the term “chiral centre” refers to a carbon atom bonded to four nonidentical substituents. [096] As used herein, the term “chiral isomer” means a compound with at least one chiral centre. Compounds with more than one chiral centre may exist either as an individual diastereomer or as a mixture of diastereomers, termed “diastereomeric mixture.” When one chiral centre is present, a stereoisomer may be characterised by the absolute configuration (R or S) of that chiral centre. Absolute configuration refers to the arrangement in space of the substituents attached to the chiral centre. The substituents attached to the chiral centre under consideration are ranked in accordance with the Sequence Rule of Cahn, Ingold and Prelog. (Cahn et al., Angew. Chem. Inter. Edit. 1966, 5, 385; errata 511; Cahn et al., Angew. Chem. 1966, 78, 413; Cahn and Ingold, J. Chem. Soc. 1951 (London), 612; Cahn et al., Experientia 1956, 12, 81; Cahn, J. Chem. Educ. 1964, 41, 116). [097] As used herein, the term “geometric isomer” means the diastereomers that owe their existence to hindered rotation about double bonds or a cycloalkyl linker (e.g., 1,3- cyclobutyl). These configurations are differentiated in their names by the prefixes cis and trans, or Z and E, which indicate that the groups are on the same or opposite side of the double bond in the molecule according to the Cahn-Ingold-Prelog rules. [098] It is to be understood that the compounds of the present disclosure may be depicted as different chiral isomers or geometric isomers. It is also to be understood that when compounds have chiral isomeric or geometric isomeric forms, all isomeric forms are intended to be included in the scope of the present disclosure, and the naming of the compounds does not exclude any isomeric forms, it being understood that not all isomers may have the same level of activity. [099] It is to be understood that the structures and other compounds discussed in this disclosure include all atropic isomers thereof. It is also to be understood that not all atropic isomers may have the same level of activity. [0100] As used herein, the term “atropic isomers” are a type of stereoisomer in which the atoms of two isomers are arranged differently in space. Atropic isomers owe their existence to a restricted rotation caused by hindrance of rotation of large groups about a central bond. Such atropic isomers typically exist as a mixture, however as a result of recent advances in chromatography techniques, it has been possible to separate mixtures of two atropic isomers in select cases. [0101] As used herein, the term “tautomer” is one of two or more structural isomers that exist in equilibrium and is readily converted from one isomeric form to another. This conversion results in the formal migration of a hydrogen atom accompanied by a switch of adjacent conjugated double bonds. Tautomers exist as a mixture of a tautomeric set in solution. In solutions where tautomerisation is possible, a chemical equilibrium of the tautomers will be reached. The exact ratio of the tautomers depends on several factors, including temperature, solvent and pH. The concept of tautomers that are interconvertible by tautomerisations is called tautomerism. Of the various types of tautomerism that are possible, two are commonly observed. In keto-enol tautomerism a simultaneous shift of electrons and a hydrogen atom occurs. Ring-chain tautomerism arises as a result of the aldehyde group (-CHO) in a sugar chain molecule reacting with one of the hydroxy groups (-OH) in the same molecule to give it a cyclic (ring-shaped) form as exhibited by glucose. [0102] It is to be understood that the compounds of the present disclosure may be depicted as different tautomers. It should also be understood that when compounds have tautomeric forms, all tautomeric forms are intended to be included in the scope of the present disclosure, and the naming of the compounds does not exclude any tautomer form. It will be understood that certain tautomers may have a higher level of activity than others. [0103] Compounds that have the same molecular formula but differ in the nature or sequence of bonding of their atoms or the arrangement of their atoms in space are termed “isomers”. Isomers that differ in the arrangement of their atoms in space are termed “stereoisomers”. Stereoisomers that are not mirror images of one another are termed “diastereomers” and those that are non-superimposable mirror images of each other are termed “enantiomers”. When a compound has an asymmetric centre, for example, it is bonded to four different groups, a pair of enantiomers is possible. An enantiomer can be characterised by the absolute configuration of its asymmetric centre and is described by the R- and S-sequencing rules of Cahn and Prelog, or by the manner in which the molecule rotates the plane of polarised light and designated as dextrorotatory or levorotatory (i.e., as (+) or (-)-isomers respectively). A chiral compound can exist as either individual enantiomer or as a mixture thereof. A mixture containing equal proportions of the enantiomers is called a “racemic mixture”. [0104] The compounds of this disclosure may possess one or more asymmetric centres; such compounds can therefore be produced as individual (R)- or (S)-stereoisomers or as mixtures thereof. Unless indicated otherwise, the description or naming of a particular compound in the specification and claims is intended to include both individual enantiomers and mixtures, racemic or otherwise, thereof. The methods for the determination of stereochemistry and the separation of stereoisomers are well-known in the art (see discussion in Chapter 4 of “Advanced Organic Chemistry”, 4th edition J. March, John Wiley and Sons, New York, 2001), for example by synthesis from optically active starting materials or by resolution of a racemic form. Some of the compounds of the disclosure may have geometric isomeric centres (E- and Z- isomers). [0105] Accordingly, the present disclosure includes those compounds of any one of the Formulae disclosed herein as defined hereinbefore when made available by organic synthesis and when made available within the human or animal body by way of cleavage of a prodrug thereof. Accordingly, the present disclosure includes those compounds of any one of the Formulae disclosed herein that are produced by organic synthetic means and also such compounds that are produced in the human or animal body by way of metabolism of a precursor compound, that is a compound of any one of the Formulae disclosed herein may be a synthetically-produced compound or a metabolically-produced compound. [0106] A suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein is one that is based on reasonable medical judgment as being suitable for administration to the subject without undesirable pharmacological activities and without undue toxicity. Various forms of prodrug have been described, for example in the following documents: a) Methods in Enzymology, Vol. 42, p. 309-396, edited by K. Widder, et al. (Academic Press, 1985); b) Design of Pro-drugs, edited by H. Bundgaard, (Elsevier, 1985); c) A Textbook of Drug Design and Development, edited by Krogsgaard- Larsen and H. Bundgaard, Chapter 5 “Design and Application of Pro-drugs”, by H. Bundgaard p. 113-191 (1991); d) H. Bundgaard, Advanced Drug Delivery Reviews, 8, 1-38 (1992); e) H. Bundgaard, et al., Journal of Pharmaceutical Sciences, 77, 285 (1988); f) N. Kakeya, et al., Chem. Pharm. Bull., 32, 692 (1984); g) T. Higuchi and V. Stella, “Pro- Drugs as Novel Delivery Systems”, A.C.S. Symposium Series, Volume 14; and h) E. Roche (editor), “Bioreversible Carriers in Drug Design”, Pergamon Press, 1987. [0107] A suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein that possesses a hydroxy group is, for example, an in vivo cleavable ester or ether thereof. An in vivo cleavable ester or ether of a compound of any one of the Formulae disclosed herein containing a hydroxy group is, for example, a pharmaceutically acceptable ester or ether which is cleaved in the subject to produce the parent hydroxy compound. Suitable pharmaceutically acceptable ester forming groups for a hydroxy group include inorganic esters such as phosphate esters (including phosphoramidic cyclic esters). Further suitable pharmaceutically acceptable ester forming groups for a hydroxy group include C1-C10 alkanoyl groups such as acetyl, benzoyl, phenylacetyl and substituted benzoyl and phenylacetyl groups, C1-C10 alkoxycarbonyl groups such as ethoxycarbonyl, N,N-(C1-C6 alkyl)2carbamoyl, 2-dialkylaminoacetyl and 2-carboxyacetyl groups. Examples of ring substituents on the phenylacetyl and benzoyl groups include aminomethyl, N-alkylaminomethyl, N,N-dialkylaminomethyl, morpholinomethyl, piperazin- 1-ylmethyl and 4-(C1-C4 alkyl)piperazin-1-ylmethyl. Suitable pharmaceutically acceptable ether forming groups for a hydroxy group include α-acyloxyalkyl groups such as acetoxymethyl and pivaloyloxymethyl groups. [0108] A suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein that possesses a carboxy group is, for example, an in vivo cleavable amide thereof, for example an amide formed with an amine such as ammonia, a C1- 4alkylamine such as methylamine, a (C1-C4 alkyl)2amine such as dimethylamine, N-ethyl-N- methylamine or diethylamine, a C1-C4 alkoxy-C2-C4 alkylamine such as 2-methoxyethylamine, a phenyl-C1-C4 alkylamine such as benzylamine and amino acids such as glycine or an ester thereof. [0109] A suitable pharmaceutically acceptable prodrug of a compound of any one of the Formulae disclosed herein that possesses an amino group is, for example, an in vivo cleavable amide derivative thereof. Suitable pharmaceutically acceptable amides from an amino group include, for example an amide formed with C1-C10 alkanoyl groups such as an acetyl, benzoyl, phenylacetyl and substituted benzoyl and phenylacetyl groups. Examples of ring substituents on the phenylacetyl and benzoyl groups include aminomethyl, N- alkylaminomethyl, N,N-dialkylaminomethyl,morpholinomethyl,piperazin-1-ylmethyl and 4- (C1-C4 alkyl)piperazin-1-ylmethyl. [0110] The dosage regimen utilising the compounds is selected in accordance with a variety of factors including type, species, age, weight, sex and medical condition of the subject; the severity of the condition to be treated; the route of administration; the renal and hepatic function of the subject; and the particular compound or salt thereof employed. An ordinarily skilled physician or veterinarian can readily determine and prescribe the effective amount of the drug required to prevent, counter, or arrest the progress of the condition. An ordinarily skilled physician or veterinarian can readily determine and prescribe the effective amount of the drug required to counter or arrest the progress of the condition. [0111] Techniques for formulation and administration of the disclosed compounds of the disclosure can be found in Remington: the Science and Practice of Pharmacy, 19th edition, Mack Publishing Co., Easton, PA (1995). In an embodiment, the compounds described herein, and the pharmaceutically acceptable salts thereof, are used in pharmaceutical preparations in combination with a pharmaceutically acceptable carrier or diluent. Suitable pharmaceutically acceptable carriers include inert solid fillers or diluents and sterile aqueous or organic solutions. The compounds will be present in such pharmaceutical compositions in amounts sufficient to provide the desired dosage amount in the range described herein. [0112] All percentages and ratios used herein, unless otherwise indicated, are by weight. Other features and advantages of the present disclosure are apparent from the different examples. The provided examples illustrate different components and methodology useful in practicing the present disclosure. The examples do not limit the claimed disclosure. Based on the present disclosure the skilled artisan can identify and employ other components and methodology useful for practicing the present disclosure. [0113] In the synthetic schemes described herein, compounds may be drawn with one particular configuration for simplicity. Such particular configurations are not to be construed as limiting the disclosure to one or another isomer, tautomer, regioisomer or stereoisomer, nor does it exclude mixtures of isomers, tautomers, regioisomers or stereoisomers; however, it will be understood that a given isomer, tautomer, regioisomer or stereoisomer may have a higher level of activity than another isomer, tautomer, regioisomer or stereoisomer. [0114] All publications and patent documents cited herein are incorporated herein by reference as if each such publication or document was specifically and individually indicated to be incorporated herein by reference. Citation of publications and patent documents is not intended as an admission that any is pertinent prior art, nor does it constitute any admission as to the contents or date of the same. The present disclosure having now been described by way of written description, those of skill in the art will recognize that the present disclosure can be practiced in a variety of embodiments and that the foregoing description and examples below are for purposes of illustration and not limitation of the claims that follow. [0115] As use herein, the phrase “compound of the disclosure” refers to those compounds which are disclosed herein (e.g., compounds of formula (I), (Ia), (Ib), and (Ic)), both generically and specifically.
Compounds of the Present Disclosure [0116] In one aspect, provided herein is a compound of formula (I),
Figure imgf000028_0001
or a pharmaceutically acceptable salt thereof, wherein Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; each R1 is independently selected from halogen, -CN, C1-6alkyl, C1-6haloalkyl, C1-6alkoxy, C3- 6cycloalkyl, and 5-8 memebered heteroaryl; each R2 is independently selected from halogen and C1-6alkyl; R3 is selected from H and C1-6alkyl; each Ra is independently selected from the group consisting of halogen, -OH, C1-6alkyl, C1- 6haloalkyl, oxo, C3-6cycloalkyl, -C(O)O-C1-6alkyl, -C(O)C1-6haloalkyl, -C(O)O-C1- 6alkylene-OC(O)-C1-6alkyl, and -N(RcRd), wherein the C1-6alkyl is optionally substituted with -OH, C1-6alkoxy, C3-6cycloalkyl, -N(RcRd), or -S(O)2C1-6alkyl, or two Ra attached to the same carbon atom, together with carbon atom to which they are attached, combine to form a C3-6cycloalkyl; each Rb is independently selected from the group consisting of halogen, -OH, -CN, C1-6alkyl, C1-6haloalkyl, C1-6 alkoxy, C1-6haloalkoxy, and C3-6cycloalkyl, wherein the C1-6 alkoxy is optionally substituted with C3-6cycloalkyl; each Rc is independently selected from H, C1-6alkyl, and C3-6cycloalkyl, wherein the C1-6alkyl is optionally substituted with -OH; each Rd is independently selected from H and C1-6alkyl; m is 0, 1, or 2; n is 0, 1, or 2; p is 0, 1, 2, 3, or 4; and q is 0, 1, 2, 3, or 4. [0117] In some embodiments, m is 0. In some embodiments, n is 0. In some embodiments, m and n are each 0. [0118] In some embodiments, Ring A is an optionally substituted 5-6 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. In some embodiments, Ring A is an optionally substituted 5-6 membered heterocyclyl comprising 1-2 nitrogen atoms. [0119] In some embodiments, Ring A is selected from optionally substituted piperidinyl and optionally substituted pyrrolidinyl. In some embodiments, Ring A is optionally substituted piperazinyl. In some embodiments, Ring A is optionally substituted piperidinyl. In some embodiments, Ring A is optionally substituted pyrrolidinyl. [0120] In some embodiments, each Ra is independently selected from C1-6alkyl and -N(RcRd). In some embodiments, each Ra is independently C1-6alkyl. In certain embodiments, each Ra is methyl. In some embodiments, each Ra is independently -N(RcRd). In some embodiments, each Rc is methyl. In some embodiments, each Rd is H. In certain embodiments, each Rc is methyl and each Rd is H. In certain embodiments, each Ra is -N(H)CH3. In certain embodiments, each Ra is independently selected from methyl and -N(H)CH3. [0121] In some embodiments, p is 1 or 2. In certain embodiments, p is 1. In certain embodiments, p is 2. [0122] In some embodiments, the portion of the compound represented
Figure imgf000029_0001
is selected from the group consisting
Figure imgf000029_0002
Figure imgf000029_0003
[0123] In some embodiments, the portion of the compound represented
Figure imgf000030_0001
Figure imgf000030_0007
[0125] In some embodiments, the portion of the compound represented
Figure imgf000030_0002
is selected from the group consisting of
Figure imgf000030_0003
, , , ,
Figure imgf000030_0004
[0126] In some embodiments, the portion of the compound represented
Figure imgf000030_0005
is selected from the group consisting
Figure imgf000030_0006
Figure imgf000031_0001
[0127] In some embodiments, the compound is a compound of formula (Ia),
Figure imgf000032_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, 2, or 3; and the rest of the variables are as defined herein. [0128] In some embodiments, p is 0. In some embodiments, p is 1 or 2. [0129] In some embodiments, Ra is methyl. [0130] In some embodiments, the compound is a compound of formula (Ib),
Figure imgf000032_0002
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein. [0131] In some embodiments, each Ra is -N(H)CH3. [0132] In some embodiments, p is 1. [0133] In some embodiments, the compound is a compound formula (Ic),
Figure imgf000032_0003
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein. [0134] In some embodiments, the compound is a compound formula (Id),
Figure imgf000033_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined herein. [0135] In some embodiments, p is 0. [0136] In some embodiments, Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. In some embodiments, Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-2 heteratoms independently selected from nitrogen and oxygen. [0137] In some embodiments, Ring B is selected from the group consisting of optionally substituted indazolyl, optionally substituted imidazo[1,2-a]pyridyl, and optionally substituted 2,7a-dihyrdobenzo[d]oxazolyl. [0138] In some embodiments, each Rb is independently selected from the group consisting of halogen, C1-6alkyl, C1-6haloalkyl, and C1-6alkoxy. In some embodiments, each Rb is independently selected from the group consisting of fluoro, methyl, methoxy, ethoxy, -CHF2, and -CF3. In some embodiments, Rb is halogen. In some embodiments, Rb is C1-3alkyl. In some embodiments, Rb is C1-3haloalkyl. In some embodiments, Rb is C1-3alkoxy. [0139] In some embodiments, q is 2 or 3. In certain embodiments, q is 2. In certain embodiments, q is 3. [0140] In some embodiments, the portion of the compound represented by
Figure imgf000033_0002
selected from the group consisting of
Figure imgf000034_0001
, Rb , H , N NH , N , Rb b b b q R q R q b N R N b N N R q N q H R H N N N N N N , N , N , N NH , N Rb , N Rb Rb b q R N Rb q q q NH N N N N N N N N Rb N N N , q , N , N Rb , N , Rb b q R q Rb b q R N q N N N N NH N N N N N N N R N Rb N b , N , Rb , Rb , q ,
Figure imgf000035_0001
[0141] In some embodiments, the portion of the compound represented by
Figure imgf000035_0002
Figure imgf000036_0001
Figure imgf000036_0003
[0142] In some embodiments, the portion of the compound represented by
Figure imgf000036_0002
[0143] In some embodiments, the portion of the compound represented by
Figure imgf000037_0001
[0144] In some embodiments, the portion of the compound represented by
Figure imgf000037_0002
[0145] In some embodiments, the portion of the compound represented by
Figure imgf000037_0003
[0146] In some embodiments, the portion of the compound represented by
Figure imgf000037_0004
F N N , O N N N N , F N N N , N N , F N N N ,
Figure imgf000038_0001
F F O F N N N N N O , O , O , S , S , F O O N N N N N N N N N N , , , , ,
Figure imgf000039_0001
[0147] To clarify, in all embodiments where two variable groups together form an alkylene, those groups along with the atoms they are attached to and possible intervening atoms, form a ring. This ring can be cycloalkyl or heterocyclyl depending on the attachment point of the variables, but the variable groups themselves are alkylene and thus contain no heteroatoms of their own. [0148] In some embodiments, the compound is selected from the compounds described in Table 1 and pharmaceutically acceptable salts thereof. [0149] In some embodiments, the compound is selected from the compounds described in Table 1, or from the disclosure. [0150] In some embodiments, the compound is selected from the compounds described in Table 1.
[0151] Table 1. Exemplary compounds of the disclosure
Figure imgf000040_0001
Figure imgf000041_0001
Figure imgf000042_0001
Figure imgf000043_0001
Figure imgf000044_0001
Figure imgf000045_0001
Figure imgf000046_0001
Figure imgf000047_0001
Figure imgf000048_0001
Figure imgf000049_0001
Figure imgf000050_0001
Figure imgf000051_0001
Figure imgf000052_0001
Figure imgf000053_0001
Figure imgf000054_0001
Figure imgf000055_0001
Figure imgf000056_0001
Figure imgf000057_0001
Figure imgf000058_0001
Figure imgf000059_0001
Figure imgf000060_0001
Figure imgf000061_0001
Figure imgf000062_0001
Figure imgf000063_0001
Figure imgf000064_0001
Figure imgf000065_0001
Figure imgf000066_0001
Figure imgf000067_0001
Figure imgf000068_0001
Figure imgf000069_0001
Figure imgf000070_0001
Figure imgf000071_0001
Figure imgf000072_0001
Figure imgf000073_0001
Figure imgf000074_0001
Figure imgf000075_0001
Figure imgf000076_0001
Figure imgf000077_0001
Figure imgf000078_0001
Figure imgf000079_0001
Figure imgf000080_0001
Figure imgf000081_0001
Figure imgf000082_0001
Figure imgf000083_0001
Figure imgf000084_0001
Figure imgf000085_0001
Figure imgf000086_0001
Figure imgf000087_0001
Figure imgf000088_0001
Figure imgf000089_0001
Figure imgf000090_0001
Figure imgf000091_0001
Figure imgf000092_0001
Figure imgf000093_0001
Figure imgf000094_0001
Figure imgf000095_0001
Figure imgf000096_0001
Figure imgf000097_0001
Figure imgf000098_0001
Figure imgf000099_0001
Figure imgf000100_0001
Figure imgf000101_0001
Figure imgf000102_0001
Figure imgf000103_0001
Figure imgf000104_0001
Figure imgf000105_0001
Figure imgf000106_0001
Figure imgf000107_0001
Figure imgf000108_0001
Figure imgf000109_0001
Figure imgf000110_0001
Figure imgf000111_0001
Figure imgf000112_0001
Figure imgf000113_0001
Figure imgf000114_0001
Figure imgf000115_0001
Figure imgf000116_0001
Figure imgf000117_0001
Figure imgf000118_0001
Figure imgf000119_0001
Figure imgf000120_0001
Figure imgf000121_0001
Figure imgf000122_0001
Figure imgf000123_0001
Figure imgf000124_0001
Figure imgf000125_0001
Figure imgf000126_0001
Figure imgf000127_0001
Figure imgf000128_0001
Figure imgf000129_0001
Figure imgf000130_0001
Figure imgf000131_0001
Figure imgf000132_0001
Figure imgf000133_0001
Figure imgf000134_0001
Figure imgf000135_0001
Figure imgf000136_0001
Figure imgf000137_0001
Figure imgf000138_0001
Figure imgf000139_0001
Figure imgf000140_0001
Figure imgf000141_0001
Figure imgf000142_0001
Figure imgf000143_0001
Figure imgf000144_0001
Figure imgf000145_0001
Figure imgf000146_0001
Figure imgf000147_0001
Figure imgf000148_0001
Figure imgf000149_0001
Figure imgf000150_0001
Figure imgf000151_0001
Figure imgf000152_0001
[0152] In some embodiments, the compound is a therapeutically active substance. In some embodiments, the compound is a small molecule splicing modulator. [0153] For the avoidance of doubt it is to be understood that, where in this specification a group is qualified by “described herein”, the said group encompasses the first occurring and broadest definition as well as each and all of the particular definitions for that group. [0154] The various functional groups and substituents making up the compounds of formulae (I), (Ia), (Ib), (Ic), and (Id) are typically chosen such that the molecular weight of the compound does not exceed 1000 daltons. More usually, the molecular weight of the compound will be less than 900, for example less than 800, or less than 750, or less than 700, or less than 650 daltons. More conveniently, the molecular weight is less than 600 and, for example, is 550 daltons or less. [0155] It will be understood that the compounds of any one of formulae (I), (Ia), (Ib), (Ic), and (Id) disclosed herein and any pharmaceutically acceptable salts thereof, comprise stereoisomers and mixtures of stereoisomers of all isomeric forms of said compounds. [0156] It is to be understood that the compounds of formulae (I), (Ia), (Ib), (Ic), and (Id) described herein include the compounds themselves, as well as their salts, and their solvates, if applicable. [0157] The in vivo effects of a compound of any one of formulae (I), (Ia), (Ib), (Ic), and (Id) disclosed herein may be exerted in part by one or more metabolites that are formed within the human or animal body after administration of a compound of any one of formulae (I), (Ia), (Ib), (Ic), and (Id) disclosed herein. As stated hereinbefore, the in vivo effects of a compound of any one of the Formulae disclosed herein may also be exerted by way of metabolism of a precursor compound (a prodrug). [0158] Suitably, the present disclosure excludes any individual compounds not possessing the biological activity defined herein. Alternative Embodiments [0159] In an alternative embodiment, compounds described herein may also comprise one or more isotopic substitutions. For example, hydrogen may be 2H (D or deuterium) or 3H (T or tritium); carbon may be, for example, 13C or 14C; oxygen may be, for example, 18O; nitrogen may be, for example, 15N, and the like. In other embodiments, a particular isotope (e.g., 3H, 13C, 14C, 18O, or 15N) can represent at least 1%, at least 5%, at least 10%, at least 15%, at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 99%, or at least 99.9% of the total isotopic abundance of an element that occupies a specific site of the compound. Methods of Synthesis [0160] In some aspects, the present disclosure provides a method of preparing a compound of the present disclosure (e.g., a compound of formula (I), (Ia), (Ib), or (Ic)). [0161] In some aspects, the present disclosure provides a method of preparing a compound, comprising one or more steps as described herein. [0162] In some aspects, the present disclosure provides a compound obtainable by, or obtained by, or directly obtained by a method for preparing a compound as described herein (e.g., a compound of formula (I), (Ia), (Ib), or (Ic)). [0163] In some aspects, the present disclosure provides an intermediate as described herein, being suitable for use in a method for preparing a compound as described herein (e.g., a compound of formula (I), (Ia), (Ib), or (Ic)). [0164] The compounds of the present disclosure (e.g., compounds of formula (I), (Ia), (Ib), or (Ic)) can be prepared by any suitable technique known in the art. Particular processes for the preparation of these compounds are described further in the accompanying examples. [0165] In the description of the synthetic methods described herein and in any referenced synthetic methods that are used to prepare the starting materials, it is to be understood that all proposed reaction conditions, including choice of solvent, reaction atmosphere, reaction temperature, duration of the experiment and workup procedures, can be selected by a person skilled in the art. [0166] It is understood by one skilled in the art of organic synthesis that the functionality present on various portions of the molecule must be compatible with the reagents and reaction conditions utilized. [0167] It will be appreciated that during the synthesis of the compounds of the disclosure (e.g., compounds of formula (I), (Ia), (Ib), or (Ic)) in the processes defined herein, or during the synthesis of certain starting materials, it may be desirable to protect certain substituent groups to prevent their undesired reaction. The skilled chemist will appreciate when such protection is required, and how such protecting groups may be put in place, and later removed. For examples of protecting groups see one of the many general texts on the subject, for example, ‘Protective Groups in Organic Synthesis’ by Theodora Green (publisher: John Wiley & Sons). Protecting groups may be removed by any convenient method described in the literature or known to the skilled chemist as appropriate for the removal of the protecting group in question, such methods being chosen so as to effect removal of the protecting group with the minimum disturbance of groups elsewhere in the molecule. Thus, if reactants include, for example, groups such as amino, carboxy or hydroxy it may be desirable to protect the group in some of the reactions mentioned herein. [0168] By way of example, a suitable protecting group for an amino or alkylamino group is, for example, an acyl group, for example an alkanoyl group such as acetyl, an alkoxycarbonyl group, for example a methoxycarbonyl, ethoxycarbonyl, or t-butoxycarbonyl group, an arylmethoxycarbonyl group, for example benzyloxycarbonyl, or an aroyl group, for example benzoyl. The deprotection conditions for the above protecting groups necessarily vary with the choice of protecting group. Thus, for example, an acyl group such as an alkanoyl or alkoxycarbonyl group or an aroyl group may be removed by, for example, hydrolysis with a suitable base such as an alkali metal hydroxide, for example lithium or sodium hydroxide. Alternatively an acyl group such as a tert-butoxycarbonyl group may be removed, for example, by treatment with a suitable acid as hydrochloric, sulphuric or phosphoric acid or trifluoroacetic acid and an arylmethoxycarbonyl group such as a benzyloxycarbonyl group may be removed, for example, by hydrogenation over a catalyst such as palladium on carbon, or by treatment with a Lewis acid for example boron tris(trifluoroacetate). A suitable alternative protecting group for a primary amino group is, for example, a phthaloyl group which may be removed by treatment with an alkylamine, for example dimethylaminopropylamine, or with hydrazine. [0169] A suitable protecting group for a hydroxy group is, for example, an acyl group, for example an alkanoyl group such as acetyl, an aroyl group, for example benzoyl, or an arylmethyl group, for example benzyl. The deprotection conditions for the above protecting groups will necessarily vary with the choice of protecting group. Thus, for example, an acyl group such as an alkanoyl or an aroyl group may be removed, for example, by hydrolysis with a suitable base such as an alkali metal hydroxide, for example lithium, sodium hydroxide or ammonia. Alternatively an arylmethyl group such as a benzyl group may be removed, for example, by hydrogenation over a catalyst such as palladium on carbon. [0170] A suitable protecting group for a carboxy group is, for example, an esterifying group, for example a methyl or an ethyl group which may be removed, for example, by hydrolysis with a base such as sodium hydroxide, or for example a tert-butyl group which may be removed, for example, by treatment with an acid, for example an organic acid such as trifluoroacetic acid, or for example a benzyl group which may be removed, for example, by hydrogenation over a catalyst such as palladium on carbon. [0171] Once a compound of formula (I), (Ia), (Ib), (Ic), or (Id) has been synthesised by any one of the processes defined herein, the processes may then further comprise the additional steps of: (i) removing any protecting groups present; (ii) converting the compound of a formula (I),(Ia), (Ib), (Ic), or (Id) into another compound of formula (I), (Ia), (Ib), (Ic), or (Id) ; and/or (iii) forming a pharmaceutically acceptable salt thereof. [0172] The resultant compounds of formula (I), (Ia), (Ib), (Ic), or (Id) can be isolated and purified using techniques well known in the art. [0173] Conveniently, the reaction of the compounds is carried out in the presence of a suitable solvent, which is preferably inert under the respective reaction conditions. Examples of suitable solvents comprise but are not limited to hydrocarbons, such as hexane, petroleum ether, benzene, toluene or xylene; chlorinated hydrocarbons, such as trichlorethylene, 1,2- dichloroethane, tetrachloromethane, chloroform or dichloromethane; alcohols, such as methanol, ethanol, isopropanol, n-propanol, n-butanol or tert-butanol; ethers, such as diethyl ether, diisopropyl ether, tetrahydrofuran (THF), 2-methyltetrahydrofuran, cyclopentylmethyl ether (CPME), methyl tert-butyl ether (MTBE) or dioxane; glycol ethers, such as ethylene glycol monomethyl or monoethyl ether or ethylene glycol dimethyl ether (diglyme); ketones, such as acetone, methylisobutylketone (MIBK) or butanone; amides, such as acetamide, dimethylacetamide, dimethylformamide (DMF) or N-methylpyrrolidinone (NMP); nitriles, such as acetonitrile; sulphoxides, such as dimethyl sulphoxide (DMSO); nitro compounds, such as nitromethane or nitrobenzene; esters, such as ethyl acetate or methyl acetate, or mixtures of the said solvents or mixtures with water. [0174] The reaction temperature is suitably between about -100 °C and 300 °C, depending on the reaction step and the conditions used. [0175] Reaction times are generally in the range between a fraction of a minute and several days, depending on the reactivity of the respective compounds and the respective reaction conditions. Suitable reaction times are readily determinable by methods known in the art, for example reaction monitoring. Based on the reaction temperatures given above, suitable reaction times generally lie in the range between 10 minutes and 48 hours. [0176] Moreover, by utilising the procedures described herein, in conjunction with ordinary skills in the art, additional compounds of the present disclosure (e.g., compounds of formula (I), (Ia), (Ib), or (Ic)) can be readily prepared. Those skilled in the art will readily understand that known variations of the conditions and processes of the following preparative procedures can be used to prepare these compounds. [0177] As will be understood by the person skilled in the art of organic synthesis, compounds of the present disclosure (e.g., compounds of formula (I), (Ia), (Ib), or (Ic)) are readily accessible by various synthetic routes, some of which are exemplified in the accompanying examples. The skilled person will easily recognise which kind of reagents and reactions conditions are to be used and how they are to be applied and adapted in any particular instance – wherever necessary or useful – in order to obtain the compounds of the present disclosure. Furthermore, some of the compounds of the present disclosure can readily be synthesised by reacting other compounds of the present disclosure under suitable conditions, for instance, by converting one particular functional group being present in a compound of the present disclosure, or a suitable precursor molecule thereof, into another one by applying standard synthetic methods, like reduction, oxidation, addition or substitution reactions; those methods are well known to the skilled person. Likewise, the skilled person will apply – whenever necessary or useful – synthetic protecting (or protective) groups; suitable protecting groups as well as methods for introducing and removing them are well-known to the person skilled in the art of chemical synthesis and are described, in more detail, in, e.g., P.G.M. Wuts, T.W. Greene, “Greene’s Protective Groups in Organic Synthesis”, 4th edition (2006) (John Wiley & Sons). [0178] General routes for the preparation of a compound of the application are described herein. Biological Assays [0179] Compounds designed, selected and/or optimised by methods described above, once produced, can be characterised using a variety of assays known to those skilled in the art to determine whether the compounds have biological activity. For example, the molecules can be characterised by conventional assays, including but not limited to those assays described below, to determine whether they have a predicted activity, binding activity and/or binding specificity. Pharmaceutical Compositions [0180] In some aspects, the present disclosure provides a pharmaceutical composition comprising a compound of the present disclosure as an active ingredient. In some embodiments, the present disclosure provides a pharmaceutical composition comprising at least one compound of each of the formulae described herein, or a pharmaceutically acceptable salt or solvate thereof, and one or more pharmaceutically acceptable carriers or excipients. In some embodiments, the present disclosure provides a pharmaceutical composition comprising at least one compound selected from Table 1, or from the disclosure. In some embodiments, the present disclosure provides a pharmaceutical composition comprising at least one compound selected from Table 1. [0181] As used herein, the term “composition” is intended to encompass a product comprising the specified ingredients in the specified amounts, as well as any product which results, directly or indirectly, from combination of the specified ingredients in the specified amounts. [0182] The compounds of present disclosure can be formulated for oral administration in forms such as tablets, capsules (each of which includes sustained release or timed release formulations), pills, powders, granules, elixirs, tinctures, suspensions, syrups and emulsions. The compounds of present disclosure on can also be formulated for intravenous (bolus or in- fusion), intraperitoneal, topical, subcutaneous, intramuscular or transdermal (e.g., patch) administration, all using forms well known to those of ordinary skill in the pharmaceutical arts. [0183] The formulation of the present disclosure may be in the form of an aqueous solution comprising an aqueous vehicle. The aqueous vehicle component may comprise water and at least one pharmaceutically acceptable excipient. Suitable acceptable excipients include those selected from the group consisting of a solubility enhancing agent, chelating agent, preservative, tonicity agent, viscosity/suspending agent, buffer, and pH modifying agent, and a mixture thereof. [0184] Any suitable solubility enhancing agent can be used. Examples of a solubility enhancing agent include cyclodextrin, such as those selected from the group consisting of hydroxypropyl-β-cyclodextrin, methyl-β-cyclodextrin, randomly methylated-β-cyclodextrin, ethylated-β-cyclodextrin, triacetyl-β-cyclodextrin, peracetylated-β-cyclodextrin, carboxymethyl-β-cyclodextrin, hydroxyethyl-β-cyclodextrin, 2-hydroxy-3- (trimethylammonio)propyl-β-cyclodextrin, glucosyl-β-cyclodextrin, sulphated β-cyclodextrin (S-β-CD), maltosyl-β-cyclodextrin, β-cyclodextrin sulphobutyl ether, branched-β- cyclodextrin, hydroxypropyl-γ-cyclodextrin, randomly methylated-γ-cyclodextrin, and trimethyl-γ-cyclodextrin, and mixtures thereof. [0185] Any suitable chelating agent can be used. Examples of a suitable chelating agent include those selected from the group consisting of ethylenediaminetetraacetic acid and metal salts thereof, disodium edetate, trisodium edetate, and tetrasodium edetate, and mixtures thereof. [0186] Any suitable preservative can be used. Examples of a preservative include those selected from the group consisting of quaternary ammonium salts such as benzalkonium halides (preferably benzalkonium chloride), chlorhexidine gluconate, benzethonium chloride, cetyl pyridinium chloride, benzyl bromide, phenylmercury nitrate, phenylmercury acetate, phenylmercury neodecanoate, merthiolate, methylparaben, propylparaben, sorbic acid, potassium sorbate, sodium benzoate, sodium propionate, ethyl p-hydroxybenzoate, propylaminopropyl biguanide, and butyl-p-hydroxybenzoate, and sorbic acid, and mixtures thereof. [0187] The aqueous vehicle may also include a tonicity agent to adjust the tonicity (osmotic pressure). The tonicity agent can be selected from the group consisting of a glycol (such as propylene glycol, diethylene glycol, triethylene glycol), glycerol, dextrose, glycerin, mannitol, potassium chloride, and sodium chloride, and a mixture thereof. [0188] The aqueous vehicle may also contain a viscosity/suspending agent. Suitable viscosity/suspending agents include those selected from the group consisting of cellulose derivatives, such as methyl cellulose, ethyl cellulose, hydroxyethylcellulose, polyethylene glycols (such as polyethylene glycol 300, polyethylene glycol 400), carboxymethyl cellulose, hydroxypropylmethyl cellulose, and cross-linked acrylic acid polymers (carbomers), such as polymers of acrylic acid cross-linked with polyalkenyl ethers or divinyl glycol (Carbopols - such as Carbopol 934, Carbopol 934P, Carbopol 971, Carbopol 974 and Carbopol 974P), and a mixture thereof. [0189] In order to adjust the formulation to an acceptable pH (typically a pH range of about 5.0 to about 9.0, more preferably about 5.5 to about 8.5, particularly about 6.0 to about 8.5, about 7.0 to about 8.5, about 7.2 to about 7.7, about 7.1 to about 7.9, or about 7.5 to about 8.0), the formulation may contain a pH modifying agent. The pH modifying agent is typically a mineral acid or metal hydroxide base, selected from potassium hydroxide, sodium hydroxide, and hydrochloric acid, and mixtures thereof, and preferably sodium hydroxide and/or hydrochloric acid. These acidic and/or basic pH modifying agents are added to adjust the formulation to the target acceptable pH range. Hence it may not be necessary to use both acid and base - depending on the formulation, the addition of one of the acid or base may be sufficient to bring the mixture to the desired pH range. [0190] The aqueous vehicle may also contain a buffering agent to stabilise the pH. When used, the buffer is selected from the group consisting of a phosphate buffer (such as sodium dihydrogen phosphate and disodium hydrogen phosphate), a borate buffer (such as boric acid, or salts thereof including disodium tetraborate), a citrate buffer (such as citric acid, or salts thereof including sodium citrate), and ε-aminocaproic acid, and mixtures thereof. [0191] The formulation may further comprise a wetting agent. Suitable classes of wetting agents include those selected from the group consisting of polyoxypropylene- polyoxyethylene block copolymers (poloxamers), polyethoxylated ethers of castor oils, polyoxyethylenated sorbitan esters (polysorbates), polymers of oxyethylated octyl phenol (Tyloxapol), polyoxyl 40 stearate, fatty acid glycol esters, fatty acid glyceryl esters, sucrose fatty esters, and polyoxyethylene fatty esters, and mixtures thereof. [0192] According to a further aspect of the disclosure there is provided a pharmaceutical composition which comprises a compound of the disclosure as defined hereinbefore, or a pharmaceutically acceptable salt, hydrate or solvate thereof, in association with a pharmaceutically acceptable diluent or carrier. [0193] The compositions of the disclosure may be in a form suitable for oral use (for example as tablets, lozenges, hard or soft capsules, aqueous or oily suspensions, emulsions, dispersible powders or granules, syrups or elixirs), for topical use (for example as creams, ointments, gels, or aqueous or oily solutions or suspensions), for administration by inhalation (for example as a finely divided powder or a liquid aerosol), for administration by insufflation (for example as a finely divided powder) or for parenteral administration (for example as a sterile aqueous or oily solution for intravenous, subcutaneous, intramuscular, intraperitoneal or intramuscular dosing or as a suppository for rectal dosing). [0194] The compositions of the disclosure may be obtained by conventional procedures using conventional pharmaceutical excipients, well known in the art. Thus, compositions intended for oral use may contain, for example, one or more colouring, sweetening, flavouring and/or preservative agents. [0195] An effective amount of a compound of the present disclosure for use in therapy is an amount sufficient to treat or prevent a disease or disorder referred to herein, slow its progression and/or reduce the symptoms associated with the condition. [0196] An effective amount of a compound of the present disclosure for use in therapy is an amount sufficient to treat a disease or disorder referred to herein, slow its progression and/or reduce the symptoms associated with the condition. [0197] The size of the dose for therapeutic or prophylactic purposes of a compound of Formula (I) or (II) will naturally vary according to the nature and severity of the conditions, the age and sex of the animal or subject and the route of administration, according to well- known principles of medicine. Methods of Use [0198] Provided herein is a method of treating a a disorder related to a nucleotide repeat expansion in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition described herein. [0199] In some embidmments, the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CNN, ANN, TNN, and GNN, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C). [0200] In some embodiments, the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CAG, CAG/CTG, GCG, GCN, CGG, CCG, CCCCGCCCCGCG, GCA, GGGGCC, CTG, GAA, ATTCT, TGGAA, GGCCTG, AAGGG, CCCTCT, ATTTT/ATTTC, and CCCTCT, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C). [0201] In certain embodiments, the nucleotide repeat expansion comprises a trinucleotide sequence repeated two or more times, wherein the trinucleotide sequence is selected from the group consisting of CAG, CTG, CGG, and GCN. [0202] Also provided herein is a method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition described herein, wherein the disease is selected from the group consisting of Dentatorubropallidoluysian atrophy, Huntington's disease, Spinal and bulbar muscular atrophy, SCA1 (Spinocerebellar ataxia Type 1), SCA2 (Spinocerebellar ataxia Type 2), SCA3 (Spinocerebellar ataxia Type 3 or Machado-Joseph disease), SCA6 (Spinocerebellar ataxia Type 6), SCA7 (Spinocerebellar ataxia Type 7), SCA12 (Spinocerebellar ataxia Type 12), SCA17 (Spinocerebellar ataxia Type 17), FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), FRAXE (Fragile XE mental retardation), Baratela-Scott syndrome, FRDA (Friedreich's ataxia), DM1 (Myotonic dystrophy Type 1), DM2 (Myotonic dystrophy Type 2) SCA8 (Spinocerebellar ataxia Type 8), Fuchs endothelial corneal dystrophy, Desbuquois dysplasia, amyotrophic lateral sclerosis, frontotemporal dementia, GLS (glutaminase) disease, and SBMA/Kennedy disease. [0203] In some embodiments, the disease is Huntington’s disease. [0204] Also provided herein is a method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition disclosed herein, wherein the disease is Huntington’s disease. [0205] In some embodiments, the disease is myotonic dystrophy 1. [0206] Also provided herein is a method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition disclosed herein, wherein the disease is myotonic dystrophy 1. [0207] In some embodiments, the disease is selected from the group consisting of FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), FRAXE (Fragile XE mental retardation). [0208] Also provided herein is a method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound or a pharmaceutical composition disclosed herein, wherein the disease is selected from the group consisting of FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), FRAXE (Fragile XE mental retardation). Routes of Administration [0209] The compounds of the disclosure (e.g., compounds of formula (I), (Ia), (Ib), or (Ic)) or pharmaceutical compositions comprising these compounds may be administered to a subject by any convenient route of administration, whether systemically/ peripherally or topically (i.e., at the site of desired action). [0210] Routes of administration include, but are not limited to, oral (e.g. by ingestion); buccal; sublingual; transdermal (including, e.g., by a patch, plaster, etc.); transmucosal (including, e.g., by a patch, plaster, etc.); intranasal (e.g., by nasal spray); ocular (e.g., by eye drops); pulmonary (e.g., by inhalation or insufflation therapy using, e.g., via an aerosol, e.g., through the mouth or nose); rectal (e.g., by suppository or enema); vaginal (e.g., by pessary); parenteral, for example, by injection, including subcutaneous, intradermal, intramuscular, intravenous, intra-arterial, intracardiac, intrathecal, intraspinal, intracapsular, subcapsular, intraorbital, intraperitoneal, intratracheal, subcuticular, intraarticular, subarachnoid, and intrasternal; by implant of a depot or reservoir, for example, subcutaneously or intramuscularly. Enumerated Embodiments 1. A compound of formula (I),
Figure imgf000162_0001
or a pharmaceutically acceptable salt thereof, wherein Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; each R1 is independently selected from halogen and C1-6alkyl; each R2 is independently selected from halogen and C1-6alkyl; each Ra is independently selected from the group consisting of halogen, C1-6alkyl, C1- 6haloalkyl, and -N(RcRd), or two Ra attached to the same carbon atom, together with carbon atom to which they are attached, combine to form a C3-6cycloalkyl; each Rb is independently selected from the group consisting of halogen, -OH, C1-6alkyl, C1- 6haloalkyl, C1-6 alkoxy, C1-6haloalkoxy, wherein the C1-6 alkoxy is optionally substituted with C3-6cycloalkyl; each Rc is independently selected from H and C1-6alkyl; each Rd is independently selected from H and C1-6alkyl; m is 0, 1, or 2; n is 0, 1, or 2; p is 0, 1, 2, 3, or 4; and q is 0, 1, 2, 3, or 4. 2. The compound of embodiment 1, wherein m and n are each 0. 3. The compound of embodiment 1 or 2, wherein Ring A is an optionally substituted 5-6 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. 4. The compound of any one of embodiments 1-3, wherein Ring A is selected from optionally substituted piperidinyl and optionally substituted pyrrolidinyl. 5. The compound of any one of embodiments 1-4, wherein each Ra is independently selected from C1-6alkyl and -N(RcRd). 6. The compound of any one of embodiments 1-5, wherein each Rc is methyl and each Rd is H. 7. The compound of any one of embodiments 1-6, wherein each Ra is independently selected from methyl and -N(H)CH3. 8. The compound of any one of embodiments 1-7, wherein p is 1 or 2. 9. The compound of any one of embodiments 1-8, wherein the portion of the compound represented
Figure imgf000163_0001
selected from the group consisting of
Figure imgf000163_0002
,
Figure imgf000164_0001
10. The compound of embodiment 1, wherein the compound is a compound of formula (Ia),
Figure imgf000164_0002
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, 2, or 3; and the rest of the variables are as defined in embodiment 1. 11. The compound of embodiment 10, wherein p is 0. 12. The compound of embodiment 10, wherein p is 1 or 2. 13. The compound of embodiment 10 or 12, wherein each Ra is methyl. 14. The compound of embodiment 1, wherein the compound is a compound of formula (Ib),
Figure imgf000164_0003
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined in embodiment 1. 15. The compound of embodiment 14, wherein each Ra is -N(H)CH3. 16. The compound of embodiment 14 or 15, wherein p is 1. 17. The compound of embodiment 1, wherein the compound is a compound of formula (Ic),
Figure imgf000165_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined in embodiment 1. 18. The compound of embodiment 17, wherein p is 0. 19. The compound of any one of embodiments 1-18, wherein Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. 20. The compound of any one of embodiments 1-19, wherein Ring B is selected from the group consisting of optionally substituted indazolyl, optionally substituted imidazo[1,2- a]pyridyl, and optionally substituted 2,7a-dihyrdobenzo[d]oxazolyl. 21. The compound of any one of embodiments 1-20, wherein each Rb is independently selected from the group consisting of halogen, C1-6alkyl, C1-6haloalkyl, and C1-6alkoxy. 22. The compound of any one of embodiments 1-21, wherein each Rb is independently selected from the group consisting of fluoro, methyl, methoxy, ethoxy, -CHF2, and -CF3. 23. The compound of any one of embodiments 1-22, wherein q is 2 or 3.
24. The compound of any one of embodiments 1-23, wherein the portion of the
Figure imgf000166_0001
25. The compound of any one of embodiments 1-24, wherein the portion of the
Figure imgf000166_0002
26. A pharmaceutical composition comprising a compound of any one of embodiments 1- 25, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients. 27. A compound of any one of embodiments 1-25, or a pharmaceutically acceptable salt thereof, for use as a small molecule splicing modulator. 28. A pharmaceutical composition comprising a compound of any one of embodiments 1- 25 and 27, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients. 29. A method of treating a disorder related to a nucleotide repeat expansion n a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26. 30. The method of embodiment 29, wherein the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CNN, ANN, TNN, and GNN, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C). 31. The method of embodiment 29, wherein the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CAG, CAG/CTG, GCG, GCN, CGG, CCG, CCCCGCCCCGCG, GCA, GGGGCC, CTG, GAA, ATTCT, TGGAA, GGCCTG, AAGGG, CCCTCT, ATTTT/ATTTC, and CCCTCT, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C). 32. The method of embodiment 30 or 31, wherein the nucleotide repeat expansion comprises a trinucleotide sequence repeated two or more times, wherein the trinucleotide sequence is selected from the group consisting of CAG, CTG, CGG, and GCN. 33. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is selected from the group consisting of Dentatorubropallidoluysian atrophy, Huntington's disease, spinal and bulbar muscular atrophy, SCA1 (Spinocerebellar ataxia Type 1), SCA2 (Spinocerebellar ataxia Type 2), SCA3 (Spinocerebellar ataxia Type 3 or Machado-Joseph disease), SCA6 (Spinocerebellar ataxia Type 6), SCA7 (Spinocerebellar ataxia Type 7), SCA12 (Spinocerebellar ataxia Type 12), SCA17 (Spinocerebellar ataxia Type 17), FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), FRAXE (Fragile XE mental retardation), Baratela-Scott syndrome, FRDA (Friedreich's ataxia), DM1 (Myotonic dystrophy Type 1), DM2 (Myotonic dystrophy Type 2), SCA8 (Spinocerebellar ataxia Type 8), Fuchs endothelial corneal dystrophy, Desbuquois dysplasia, amyotrophic lateral sclerosis, frontotemporal dementia, GLS (glutaminase) disease, and SBMA/Kennedy disease. 34. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is Huntington’s disease. 35. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is Myotonic dystrophy 1. 36. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of embodiments 1-25 or a pharmaceutical composition of embodiment 26, wherein the disease is selected from the group consisting of FRAXA (Fragile X syndrome), FXTAS (Fragile X- associated tremor/ataxia syndrome), and FRAXE (Fragile XE mental retardation). EXAMPLES [0211] For exemplary purpose, neutral compounds of formula (I), (Ia), (Ib), (Ic), and/or (Id) are may be synthesized and tested in the examples. It is understood that neutral compounds of formula (I), (Ia), (Ib), (Ic), and/or (Id) may be converted to the corresponding pharmaceutically acceptable salts of the compounds using routine techniques in the art (e.g., by saponification of an ester to the carboxylic acid salt, or by hydrolyzing an amide to form a corresponding carboxylic acid and then converting the carboxylic acid to a carboxylic acid salt). [0212] Nuclear magnetic resonance (NMR) spectra were recorded at 400 MHz or 300 MHz as stated; the chemical shifts (δ) are reported in parts per million (ppm). Spectra were recorded using a Bruker or Varian instrument with 8, 16 or 32 scans. [0213] LC-MS chromatograms and spectra were recorded using an Agilent 1200 or Shimadzu LC-20 AD&MS 2020 instrument using a C-18 column such as C182.1 x 30 mm, unless otherwise stated. Injection volumes were 0.7 – 8.0 µl and the flow rates were typically 0.8 or 1.2 ml/min. Detection methods were diode array (DAD) or evaporative light scattering (ELSD) as well as positive ion electrospray ionisation. MS range was 100 - 1000 Da. Solvents were gradients of water and acetonitrile both containing a modifier (typically 0.01 – 0.04 %) such as trifluoroacetic acid or ammonium carbonate. Abbreviations: ACN acetonitrile (Ac)2O acetic anhydride BINAP 2,2′-bis(diphenylphosphino)-1,1′-binaphthyl CDCl3 chloroform-d Cs2CO3 caesium carbonate DCM dichloromethane DIEA N,N-diisopropylethylamine DMAP 4-dimethylaminopyridine DMSO dimethylsulphoxide DMSO-d6 hexadeuterodimethylsulphoxide ESI electrospray ionisation EA ethyl acetate FA formic acid h hour(s) 1H NMR proton nuclear magnetic resonance spectroscopy H2 hydrogen H2O water HCl hydrochloric acid HDMS bis(trimethylsilyl)amine HOAc acetic acid HPLC high performance liquid chromatography IPA isopropyl alcohol K2CO3 potassium carbonate M molar MeOD-d4 methanol-d4 MeOH methanol MS mass spectrometry N2 nitrogen NBS N-bromosuccinimide NH3 ammonia Na2CO3 sodium carbonate Na2SO4 sodium sulfate NaOAc sodium acetate NMR nuclear magnetic resonance Pd/C palladium on carbon Pd(dppf)Cl2 [1,1′-bis(diphenylphosphino)ferrocene]dichloropalladium(II) Pd(OAc)2 palladium (II) acetate PE petroleum ether PPTS pyridinium p-toluenesulfonate prep-HPLC preparative high performance liquid chromatography RT room temperature sat. saturated TEA triethylamine TFA trifluoroacetic acid THF tetrahydrofuran TMSOTf trimethylsilyl trifluoromethanesulfonate wt weight Y Yield
Example 1 – Preparation of (S)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride (Compound 1)
Figure imgf000171_0001
Step 1: Preparation of 5-bromo-2, 3-difluorobenzaldehyde [0214] To a mixture of 2, 3-difluorobenzaldehyde (25 g, 176 mmol) in H2SO4 (250 mL) was added NBS (37.6 g, 211 mmol). The mixture was stirred at 60℃ for 16 h. The reaction was poured into ice-water (200 mL) and extracted with EA (300 mL x 3). The combined organic layer was washed with brine (200 mL), dried over Na2SO4 and evaporated in vacuo. The residue was purified by silica gel column chromatography (PE) to give title product (20.00 g, Y: 51.6 %) as a yellow oil. 1H NMR (400 MHz, DMSO-d6) δ 10.21 (s, 1H), 8.23 – 8.01 (m, 1H), 7.88 – 7.69 (m, 1H). Step 2: Preparation of (E)-5-bromo-2,3-difluorobenzaldehyde oxime [0215] To a mixture of 5-bromo-2, 3-difluorobenzaldehyde (40 g, 181 mmol) in THF (400 mL) were added NH2OH·HCl (15 g, 217 mmol) and K2CO3 (30 g, 217 mmol). The mixture was stirred at 40 oC for 16 h. The reaction was diluted with water (300 mL) and extracted with EA (400 mL x 3). The combined organic layer was washed with brine (400 mL), dried over Na2SO4 and evaporated in vacuo to give tittle product (30 g, Y: 70.5 %) as a white solid, which was used to next step without further purification. ESI-MS (M+H) +: 236.0. 1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 8.23 – 8.15 (m, 1H), 7.88 – 7.76 (m, 1H), 7.71 – 7.63 (m, 1H). Step 3: Preparation of 5-bromo-7-fluoro-1H-indazole [0216] To a mixture of (E)-5-bromo-2, 3-difluorobenzaldehyde oxime (30 g, 128 mmol) in 1,4-dioxane (300 mL) was added N2H4 .H2O (44.7 g, 894 mmol). The mixture was stirred at 145 oC for 16 h. The mixture was diluted with water (350 mL) and extracted with EA (450 mL x 3). The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and evaporated in vacuo. The crude was purified by silica gel column chromatography (PE: EA= 5:1) to give title product (16.5 g, Y: 60.2 %) as a white solid. ESI-MS (M+H) +: 215.1. 1H NMR (400 MHz, DMSO-d6) δ 8.22 – 8.15 (m, 1H), 7.88 (s, 1H), 7.45 (d, J = 10.4 Hz, 1H). Step 4: Preparation of 5-bromo-7-fluoro-2-methyl-2H-indazole [0217] To a mixture of 5-bromo-7-fluoro-1H-indazole (33 g, 154 mmol) in EA (330 mL) was added trimethyloxonium tetrafluoroborate (27.2 g, 185 mmol) and stirred at r.t for 5 h. The mixture was quenched with NaHCO3 (200 mL) and extracted with EA (350 mL x 3). The combined organic layer was washed with brine (400 mL), dried over Na2SO4, filtered and concentrate in vacuo. The residue was purified by column chromatography (PE: EA= 5:1) to give title product (18 g, Y: 51.4 %) as a white solid. ESI-MS (M+H) +: 229.1. 1H NMR (400 MHz, DMSO-d6) δ 8.55 – 8.36 (m, 1H), 7.81 (d, J = 1.4 Hz, 1H), 7.30 – 7.17 (m, 1H), 4.20 (s, 3H). Step 5: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0218] To a mixture of 5-bromo-7-fluoro-2-methyl-2H-indazole (10 g, 44 mmol) and diphenylmethanimine (7.93 g, 44 mmol) in 1.4-dioxane (200 mL) were added BINAP (5.46 g, 8 mmol), Pd(OAc)2 (1 g, 4.4 mmol) and Cs2CO3 (28.6 g, 88 mmol). The mixture was stirred at 100 ℃ for 16 h. The reaction was diluted with water (300 mL), extracted with EA (500 mL x 3). The organic layer was washed with brine, dried over Na2SO4 and evaporated in vacuo. The crude was purified by silica gel column chromatography (PE: EA =3:1) to give title product (7 g, yield 65%) as a yellow solid. ESI-MS (M+H)+: 330.11H NMR (400 MHz, DMSO-d6) δ 8.21 (d, J = 2.8 Hz, 1H), 7.69 – 7.64 (m, 2H), 7.56 – 7.52 (m, 1H), 7.50 – 7.44 (m, 2H), 7.34 – 7.29 (m, 3H), 7.21 – 7.16 (m, 2H), 6.68 (d, J = 1.3 Hz, 1H), 6.58 (dd, J = 12.7, 1.3 Hz, 1H), 4.10 (s, 3H). Step 6: Preparation of 7-fluoro-2-methyl-2H-indazol-5-amine hydrochloride [0219] A mixture of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (5 g, 15.2 mmol) in 3M HCl / EA (70 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (2.5 g, yield 82%) as a yellow solid. ESI-MS (M+H)+: 166.1. 1H NMR (400 MHz, DMSO-d6) δ 10.63 (s, 2H), 8.61 (d, J = 2.7 Hz, 1H), 7.69 (d, J = 1.4 Hz, 1H), 7.11 (dd, J = 11.7, 1.4 Hz, 1H), 4.22 (s, 3H). Step 7: Preparation of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine [0220] A solution of 4-chloro-1H-pyrrolo[2,3-b]pyridine (96 g, 627.45 mmol) in dimethylsulfide borane (600 mL, 2M in THF) was stirred at 60 oC for 16 h. The mixture was diluted with MeOH (300 mL) and concentrated in vacuo, the residue was purified by column gel chromatography (PE / EA=3 / 1) to give title product (16 g, 16.45 %) as a yellow solid. ESI-MS (M+H)+: 155.2. 1H NMR (400 MHz, CDCl3) δ 7.62 (d, J = 5.7 Hz, 1H), 6.42 (d, J = 5.8 Hz, 1H), 3.60 (t, J = 8.5 Hz, 2H), 3.05 (t, J = 8.5 Hz, 2H). Step 8: Preparation of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate [0221] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (350 mg, 2.26 mmol) and tert-butyl (S)-2-methylpiperazine-1-carboxylate (904 mg, 4.52 mmol) in a sealed tube was added DIEA (1.5 g, 11.3 mmol). The reaction mixture was stirred at 140 °C for 16 h. The mixture was concentrated in vacuo and the residue was purified by column gel chromatography (DCM / MeOH=10 / 1) and C18 (0.1% FA in H2O / ACN) to give title product (200 mg, 27.86 %) as a yellow solid. ESI-MS (M+H)+: 319.2. 1H NMR (400 MHz, DMSO-d6) δ 7.54 (d, J = 5.9 Hz, 1H), 6.05 (d, J = 6.0 Hz, 1H), 5.86 (s, 1H), 4.21 – 4.09 (m, 1H), 3.80 – 3.71 (m, 1H), 3.49 – 3.41 (m, 1H), 3.40 – 3.35 (m, 3H), 3.16 – 3.05 (m, 1H), 3.01 – 2.90 (m, 2H), 2.87 – 2.80 (m, 1H), 2.76 – 2.67 (m, 1H), 1.41 (s, 9H), 1.19 (d, J = 6.6 Hz, 3H). Step 9: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate [0222] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (180 mg, 0.57 mmol) and 7-fluoro-2-methyl-2H-indazol-5- amine (188 mg, 1.14 mmol) in DCM (10 mL) were added TEA (230 mg, 2.28 mmol) and triphosgene (271 mg, 0.91 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was purified by C18 (0.1% FA in H2O / ACN) to give title product (40 mg, 13.94 %) as a yellow solid. ESI-MS (M+H)+: 510.4. 1H NMR (400 MHz, CDCl3) δ 11.65 (s, 1H), 7.84 (d, J = 5.9 Hz, 1H), 7.78 (dd, J = 6.8, 1.9 Hz, 2H), 7.01 (d, J = 12.7 Hz, 1H), 6.27 (d, J = 6.0 Hz, 1H), 4.32 – 4.24 (m, 1H), 4.14 (s, 3H), 4.12 – 4.03 (m, 2H), 3.93 – 3.84 (m, 1H), 3.48 – 3.33 (m, 2H), 3.20 – 3.12 (m, 1H), 3.06 – 2.96 (m, 3H), 2.93 – 2.82 (m, 1H), 1.42 (s, 9H), 1.23 (d, J = 6.7 Hz, 3H). Step 10: Preparation of (S)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride [0223] To a solution of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 3 M HCl / EA (1 mL). The mixture was stirred at RT for 2 h. The precipitate was filtered, washed with EA (5 mL) and lyophilized to give title product (25 mg, 71.43 %) as a yellow solid. ESI-MS (M+H) +: 410.2. 1H NMR (400 MHz, DMSO-d6) δ 9.75 (s, 2H), 8.44 (s, 1H), 7.91 – 7.77 (m, 1H), 7.76 – 7.71 (m, 1H), 7.33 (d, J = 13.5 Hz, 1H), 7.01 – 6.68 (m, 1H), 4.38 – 4.20 (m, 2H), 4.18 (s, 3H), 4.17 – 4.11 (m, 1H), 3.61 – 3.21 (m, 7H), 3.16 – 3.08 (m, 1H), 1.32 (d, J = 6.1 Hz, 3H).
Example 2 – Preparation of (R) -N- (7-fluoro-2-methyl-2H-indazol-5-yl) -4- (3- (methylamino) pyrrolidin-1-yl) -2,3-dihydro-1H-pyrrolo [2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate (Compound 2)
Figure imgf000175_0001
Step 1: Preparation of phenyl (7-fluoro-2-methyl-2H-indazol-5-yl)carbamate [0224] To a solution of 7-fluoro-2-methyl-2H-indazol-5-amine (400 mg, 2.42 mmol) in DCM (10 mL) were added pyridine (573 mg, 7.26 mmol) and phenyl carbonochloridate (455 mg, 2.90 mmol) at 0 oC. The mixture was stirred at RT for 3 h. The reaction mixture was diluted with H2O (15 mL), the precipitate was filtered, washed with water and dried in vacuo to give title product (500 mg, 72.46 %) as yellow solid. ESI-MS (M+H) +: 286.1. 1H NMR (400 MHz, DMSO-d6) δ 10.26 (s, 1H), 8.39 (d, J = 2.8 Hz, 1H), 7.68 (s, 1H), 7.44 (t, J = 7.8 Hz, 2H), 7.29 – 7.14 (m, 4H), 4.16 (s, 3H). Step 2: Preparation of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate [0225] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo [2,3-b] pyridine (600 mg, 3.88 mmol) in DIEA (3.2 mL) was added tert-butyl (R)-methyl(pyrrolidin-3-yl) carbamate (930 mg, 4.65 mmol). The resulting mixture was stirred at 140 oC for 24 h in a sealed tube. The mixture was allowed to cooling down to room temperature and concentrated in vacuo. The crude was purified by silica gel column (PE / EA=1:1 to DCM / MeOH=10:1) to give title product (562 mg, 45%) as a black oil. ESI-MS (M+H)+: 319.2. 1H NMR (400 MHz, DMSO- d6) δ 7.43 (d, J = 6.7 Hz, 1H), 6.01 (d, J = 6.8 Hz, 1H), 3.69 – 3.63 (m, 2H), 3.50 – 3.42 (m, 3H), 3.35 – 3.27 (m, 4H), 2.74 (s, 3H), 2.17 – 2.01 (m, 2H), 1.41 (s, 9H). Step 3: Preparation of tert-butyl (R)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo [2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate [0226] To a mixture of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate (500 mg, 1.57 mmol) in THF (5 mL) were added DMAP (20 mg, 0.16 mmol) and phenyl (7-fluoro-2-methyl-2H-indazol-5-yl) carbamate (493 mg, 1.73 mmol) at 0 oC. The resulting mixture was stirred at 80 oC for 16 h in a sealed tube. The mixture was allowed to cooling down to room temperature and concentrated in vacuo. The mixture was diluted with water (5 mL), extracted with EA (5 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE / EA=1:1) to give title product (388 mg, 48%) as a yellow solid. ESI- MS (M+H)+: 510.3. Step 4: Preparation of (R) -N- (7-fluoro-2-methyl-2H-indazol-5-yl) -4- (3-(methylamino) pyrrolidin-1-yl) -2,3-dihydro-1H-pyrrolo [2,3-b] pyridine-1-carboxamide 2,2,2- trifluoroacetate [0227] To a mixture of tert-butyl (R)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl) -2,3-dihydro-1H-pyrrolo [2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate (360 mg, 0.71 mmol) in EA (5 mL) was added 3M HCl / EA (5 mL). The mixture was stirred at RT for 2 h. The mixture was diluted with water (5 mL), extracted with EA (5 mL × 3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / ACN) to give title product (34.98 mg, yield: 12 %) as a white solid. ESI-MS (M+H)+: 410.2. 1H NMR (400 MHz, DMSO-d6) δ 8.91 (s, 2H), 8.40 (s, 1H), 7.81 (s, 1H), 7.71 (d, J = 1.3 Hz, 1H), 7.27 (dd, J = 13.2 Hz, 1H), 6.37 (s, 1H), 4.17 (s, 3H), 4.13 – 3.97 (m, 2H), 3.94 – 3.86 (m, 2H), 3.83 – 3.66 (m, 5H), 2.67 (s, 3H), 2.34 – 2.26 (m, 1H), 2.17 – 2.16 (m, 1H). Example 3 – Preparation of (S)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound
Figure imgf000177_0001
Step 1: Preparation of tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) pyrrolidin-3-yl) (methyl) carbamate [0228] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo [2,3-b] pyridine (300 mg, 1.94 mmol) in DIEA (1.6 mL) was added tert-butyl (S)-methyl(pyrrolidin-3-yl) carbamate (465 mg, 2.32 mmol). The resulting mixture was stirred at 140 o C for 16 h in a sealed tube. The mixture was allowed to cooling down to room temperature and concentrated in vacuo. The crude was purified by silica gel column (DCM / MeOH=10:1) to give title product (270 mg, 44%) as a yellow oil. ESI-MS (M+H)+: 319.2. Step 2: Preparation of tert-butyl (S)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate [0229] To a mixture of tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate (200 mg, 0.63 mmol) in THF (5 mL) were added phenyl (7-fluoro-2-methyl-2H-indazol-5-yl)carbamate (197 mg, 0.69 mmol) and DMAP (8 mg, 0.06 mmol). The mixture was stirred at 80 oC for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine (10 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE / EA=1:1) to give the title compound (40 mg, Y: 12.4%) as a yellow solid. ESI-MS: (M+H)+:510.2. 1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 8.34 (d, J = 2.7 Hz, 1H), 8.10 (d, J = 6.4 Hz, 1H), 7.81 (d, J = 6.1 Hz, 1H), 7.71 – 7.70 (m, 1H), 6.61 (d, J = 6.4 Hz, 1H), 4.16 (s, 3H), 4.07 – 3.96 (m, 1H), 3.96 – 3.87 (m, 2H), 3.84 – 3.72 (m, 2H), 3.70 – 3.62 (m, 4H), 2.96 (s, 3H), 2.06 – 2.04 (m, 2H), 1.42 (s, 9H). Step 3: Preparation of (S)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0230] To a solution of tert-butyl (S)-(1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl) carbamate (20 mg, 0.04 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtered and the residue was purified by prep-HPLC (0.03% NH3.H2O in water / ACN) to give title product (1.31 mg, Y: 8.2%) as a white solid. ESI-MS (M+H)+: 410.2. 1H NMR (400 MHz, MeOD-d4) δ 8.17 (d, J = 2.7 Hz, 1H), 7.79 (d, J = 6.1 Hz, 1H), 7.67 (d, J = 1.5 Hz, 1H), 7.17 (dd, J = 12.9, 1.5 Hz, 1H), 6.18 (d, J = 6.2 Hz, 1H), 4.20 (s, 3H), 3.99 (t, J = 8.6 Hz, 2H), 3.77 – 3.67 (m, 2H), 3.59 – 3.53 (m, 1H), 3.41 – 3.34 (m, 4H), 2.44 (s, 3H), 2.23 – 2.14 (m, 1H), 1.92 – 1.82 (m, 1H). Example 4 – Preparation of (R)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 4)
Figure imgf000178_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate [0231] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (400 mg, 2.58 mmol) in DIEA (1.7 g, 12.90 mmol) was added tert-butyl (R)-2-methylpiperazine-1-carboxylate (1.0 g, 5.16 mmol). The mixture was stirred at 140 oC for 16 h in a sealed tube. The mixture was diluted with water (20 mL) and extracted with EA (20 mL x 3). The combined organic layer was washed with brine (30 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE / EA=3:1) to give the title compound (120 mg, 14.6 %) as a yellow oil. ESI-MS (M+H)+:319.2. 1H NMR (400 MHz, DMSO-d6) δ 7.54 (d, J = 5.9 Hz, 1H), 6.05 (d, J = 6.0 Hz, 1H), 5.89 (s, 1H), 4.18 – 4.12 (m, 1H), 4.00 – 3.91 (m, 1H), 3.76 (d, J = 13.3 Hz, 1H), 3.56 (d, J = 12.3 Hz, 1H), 3.15 – 3.05 (m, 2H), 2.99 – 2.93 (m, 2H), 2.84 – 2.79 (m, 2H), 2.72 – 2.67 (m, 1H), 1.41 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate [0232] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (5 mL) were added TEA (159 mg, 1.57 mmol), triphosgene (112 mg, 0.38 mmol), 7-fluoro-2-methyl-2H-indazol-5-amine (52 mg, 0.31 mmol). The mixture was stirred at RT for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layers were washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE / EA=2:1) to give the title compound (60 mg, Y: 37.4 %) as a yellow solid. ESI-MS (M+H)+:510.3. 1H NMR (400 MHz, DMSO-d6) δ 8.50 (s, 1H), 8.31 (d, J = 2.8 Hz, 1H), 7.72 – 7.67 (m, 1H), 7.57 (d, J = 1.5 Hz, 1H), 7.18 (dd, J = 13.9, 1.5 Hz, 1H), 4.14 (s, 3H), 4.04 – 4.02 (m, 2H), 3.91 – 3.87 (m, 1H), 3.76 – 3.69 (m, 2H), 3.12 – 3.08 (m, 2H), 3.07 – 3.04 (m, 2H), 2.93 – 2.86 (m, 2H), 1.42 (s, 9H), 1.09 (d, J = 6.7 Hz, 3H). Step 3: Preparation of (R)-N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0233] To a solution of tert-butyl (R)-4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (5.21 mg, 14.6 %) as a white solid. ESI-MS (M+H)+:410.2. 1H NMR (400 MHz, MeOD-d4) δ 8.62 – 8.43 (m, 1H), 8.19 (d, J = 2.7 Hz, 1H), 7.99 (d, J = 6.0 Hz, 1H), 7.69 (d, J = 1.4 Hz, 1H), 7.19 (dd, J = 12.8, 1.4 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.20 (s, 3H), 4.10 – 4.05 (m, 2H), 3.71 (d, J = 13.1 Hz, 2H), 3.28 – 3.22 (m, 2H), 3.17 – 3.12 (m, 3H), 3.10 – 3.07 (m, 1H), 2.82 – 2.76 (m, 1H), 1.28 (d, J = 6.5 Hz, 3H). Example 5 – Preparation of 4-(3,3-dimethylpiperazin-1-yl) -N-(7-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate (Compoun
Figure imgf000180_0001
Figure imgf000180_0002
Step 1: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate [0234] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine (250 mg, 1.62 mmol) and tert-butyl 2,2-dimethylpiperazine-1-carboxylate (1.3 g, 6.49 mmol) in a sealed tube was stirred at 140 ℃ for 16 h. The mixture was concentrated in vacuo and purified by column C18 (0.1 % FA in water / ACN) to give title product (400 mg, 61 %) as a brown solid. ESI- MS (M+H)+: 333.2. 1H NMR (400 MHz, DMSO-d6) δ 8.24 (s, 1H), 7.47 (d, J = 6.1 Hz, 1H), 6.06 (d, J = 6.3 Hz, 1H), 3.65 (t, J = 5.5 Hz, 2H), 3.51 – 3.45 (m, 2H), 3.45 – 3.38 (m, 4H), 3.16 (t, J = 8.5 Hz, 2H), 1.42 (s, 9H), 1.35 (s, 6H). Step 2: Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate [0235] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (200 mg, 0.60 mmol) and 7-fluoro-2-methyl-2H-indazol-5- amine (199 mg, 1.20 mmol) in THF (4 mL) were added TEA (182 mg, 1.81 mmol) and triphosgene (356 mg, 1.20 mmol) at 0 oC. The reaction mixture was stirred at RT for 16 h. The mixture was diluted with water (4 mL), extracted with EA (4 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE / EA=1:1) to give title product (140 mg, 44%) as a yellow oil. ESI-MS (M+H)+: 524.4. Step 3: Preparation of 4-(3,3-dimethylpiperazin-1-yl) -N-(7-fluoro-2-methyl-2H-indazol-5-yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide diformate [0236] To a mixture of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (120 mg, 0.23 mmol) in EA (2 mL) was added 4 M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL × 3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / ACN) to give title product (42.53 mg, yield: 43 %) as a purple-pink solid. ESI-MS (M+H)+: 424.2. 1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 8.35 (d, J = 2.8 Hz, 1H), 8.22 (s, 2H), 7.94 (d, J = 6.1 Hz, 1H), 7.71 (d, J = 1.6 Hz, 1H), 7.26 (dd, J = 13.3, 1.6 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.16 (s, 3H), 3.98 (t, J = 8.6 Hz, 2H), 3.31 – 3.26 (m, 2H), 3.15 – 3.09 (m, 4H), 3.05 – 2.99 (m, 2H), 1.21 (s, 6H). Example 6 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 6)
Figure imgf000181_0001
Step 1: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate [0237] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (5 g, 32.23 mmol) and tert-butyl piperazine-1-carboxylate (12 g, 64.46 mmol) was added DIEA (10 mL). The reaction mixture was stirred at 140 °C for 16 h in a sealed tube. The mixture was concentrated in vacuo and the residue was purified by column gel chromatography (DCM / MeOH=10 / 1) and C18 (0.1% FA in H2O / ACN) to give title product (3 g, 30.61 %) as a yellow solid. ESI-MS (M+H)+: 305.2. 1H NMR (400 MHz, DMSO-d6) δ 7.53 (d, J = 6.0 Hz, 1H), 6.10 (d, J = 6.1 Hz, 1H), 3.46 – 3.38 (m, 6H), 3.15 – 3.09 (m, 4H), 3.01 – 2.95 (m, 2H), 1.41 (s, 9H). Step 2: Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0238] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (300 mg, 0.99 mmol) and 7-fluoro-2-methyl-2H-indazol-5-amine (163 mg, 0.99 mmol) in THF (10 mL) were added TEA (300 mg, 2.97 mmol) and triphosgene (294 mg, 0.99 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column gel chromatography (PE / EA = 1 / 2) to give title product (120 mg, 24.54 %) as a yellow solid. ESI-MS (M+H)+: 496.3. 1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 8.36 (d, J = 2.6 Hz, 1H), 7.95 (d, J = 6.1 Hz, 1H), 7.77 – 7.66 (m, 1H), 7.26 (d, J = 13.4 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.16 (s, 3H), 3.98 (t, J = 8.6 Hz, 2H), 3.48 – 3.41 (m, 4H), 3.29 – 3.27 (m, 4H), 3.12 (t, J = 8.5 Hz, 2H), 1.43 (s, 9H). Step 3: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0239] To a solution of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (120 mg, 0.24 mmol) in EA (2 mL) was added 4 M HCl / EA (2 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.1 % FA in water / ACN) to give title product (53 mg, 49.72 %) as a yellow solid. ESI-MS (M+H)+: 396.2. 1H NMR (400 MHz, DMSO-d6) δ 11.86 (s, 1H), 8.35 (d, J = 2.7 Hz, 1H), 8.24 – 8.15 (m, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.74 – 7.65 (m, 1H), 7.26 (d, J = 13.0 Hz, 1H), 6.52 (d, J = 5.8 Hz, 1H), 4.16 (s, 3H), 3.97 (t, J = 8.5 Hz, 2H), 3.25 – 3.23 (m, 4H), 3.10 – 3.09 (m, 2H), 2.93 – 2.76 (m, 4H).
Example 7 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 7)
Figure imgf000183_0001
Compound 7 Step 1: Preparation of 5-bromo-4-fluoropyridin-2-amine [0240] To a solution of 4-fluoropyridin-2-amine (24 g, 0.21 mol) in ACN (300 mL) was added NBS (38.1 g, 0.21 mol), the mixture was stirred for 4 h at RT. The mixture was diluted with water (300 mL), extracted with EA (300 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuum. The crude was purified by silica gel column chromatography (PE: EA= 5: 1) to give title product (38 g, 92.93 %) as a white solid. ESI-MS (M+H) +: 192.9. 1H NMR (400 MHz, CDCl3) δ 8.12 (d, J = 9.6 Hz, 1H), 6.28 (d, J = 10.0 Hz, 1H), 4.79 (s, 2H). Step 2: Preparation of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine [0241] To a solution of 5-bromo-4-fluoropyridin-2-amine (10 g, 52.36 mmol ) in IPA (120 mL) was added 1-bromopropan-2-one (8.8 mL, 104.71 mmol), the mixture was stirred at 85oC for 16 h. The mixture was concentrated in vacuo, the residue was diluted with 2 M NaOH (100 mL) and stirred at RT overnight. The mixture was extracted with EA (150 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuum. The crude was purified by silica gel column chromatography (PE : EA= 4 : 1) to give title product (4.4 g, 36.69%) as an off-white solid. ESI-MS (M+H) +: 231.0. 1H NMR (400 MHz, CDCl3) δ 8.14 (d, J = 6.5 Hz, 1H), 7.20 (s, 1H), 7.16 (d, J = 8.9 Hz, 1H), 2.35 (d, J = 0.6 Hz, 3H). Step 3: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine [0242] To a solution of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine (4 g, 17.46 mmol), diphenylmethanimine (3.8 g, 20.96 mmol), Cs2CO3 (17 g, 52.39 mmol) and Pd(OAc)2 (39.2 mg, 0.17 mmol) in 1,4-dioxane (50 mL) was added BINAP (217 mg, 0.35 mmol), the mixture was stirred at 100 oC for 16 h under N2. The mixture was diluted with water (100 mL), extracted with EA (80 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuum. The crude was purified by silica gel column chromatography (PE : EA= 4 : 1) to give title product (2.7 g, 46.94 %) as a yellow solid. ESI-MS (M+H) +: 330.2. 1H NMR (400 MHz, CDCl3) δ 7.68 (d, J = 7.2 Hz, 2H), 7.44 (s, 1H), 7.35 (t, J = 6.6 Hz, 3H), 7.22 (d, J = 20.2 Hz, 3H), 7.11 (s, 2H), 7.04 (s, 1H), 6.95 (d, J = 10.3 Hz, 1H), 2.29 (s, 3H). Step 4: Preparation of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride [0243] A solution of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (2.35 g, 7.13 mmol ) in 3M HCl / EA (24 mL) was stirred at RT for 2 h. The precipitate was filtered, washed with EA (30 mL) and dried to give the title compound (1.4 g, 97.32 %) as a white solid. ESI-MS (M+H) +: 166.1. 1H NMR (400 MHz, DMSO-d6) δ 8.19 (d, J = 7.3 Hz, 1H), 7.94 (s, 1H), 7.75 (d, J = 10.0 Hz, 1H), 5.81 (s, 2H), 2.40 (s, 3H). Step 5: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0244] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.32 mmol) and 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (132 mg, 0.65 mmol) in THF (5 mL) was added TEA (332 mg, 3.29 mmol), then triphosgene (194 mg, 0.65 mmol) was added slowly at 0 oC. The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was purified by silica gel column chromatography (PE : EA= 1: 2) to give the compound (100 mg, 61.42%) as a yellow solid. ESI-MS (M+H) +: 496.2. 1H NMR (400 MHz, CDCl3) δ 9.09 (d, J = 7.0 Hz, 1H), 7.86 (d, J = 5.9 Hz, 1H), 7.48 (dd, J = 12.1, 6.8 Hz, 1H), 7.12 (d, J = 11.1 Hz, 1H), 7.07 (t, J = 5.3 Hz, 1H), 6.30 (d, J = 6.0 Hz, 1H), 4.08 (t, J = 8.5 Hz, 2H), 3.51 – 3.47 (m, 4H), 3.20 – 3.14 (m, 4H), 3.05 (t, J = 8.4 Hz, 2H), 2.34 (s, 3H), 1.42 (s, 9H). Step 6: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0245] To a mixture of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.18 mmol) in EA (3 mL) was added 3 M HCl / EA (1.5 mL), the mixture was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (33 mg, Y: 45.95 %) as a white solid. ESI-MS (M+H) +: 396.1. 1H NMR (400 MHz, DMSO-d6) δ 11.95 (s, 1H), 9.19 (d, J = 7.4 Hz, 1H), 8.21 (s, 1H), 7.91 (d, J = 6.0 Hz, 1H), 7.71 (s, 1H), 7.42 (d, J = 11.7 Hz, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.01 (t, J = 8.5 Hz, 2H), 3.41 – 3.38 (m, 4H), 3.16 – 3.11 (m, 2H), 3.07 – 3.01 (m, 4H), 2.29 (s, 3H). Example 8 – Preparation of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate (Compound 8)
Figure imgf000185_0001
Step 1: Preparation of 5-bromo-2,3-difluoro-4-methylbenzaldehyde [0246] To a solution of 2,3-difluoro-4-methylbenzaldehyde (25 g, 0.16 mol) in concentrated H2SO4 (300 mL) was added NBS (31.38 g, 0.18 mmol) . The mixture was stirred at 60oC for 16 h. The mixture was poured into ice-water (500 mL) and extracted with EA (150 mLx3). The combined organic washed with brine (300 mL x3), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE) to give title product (24 g, 64.10%) as a yellow oil. 1H NMR (400 MHz, DMSO-d6) δ 10.08 (s, 1H), 7.83 (dd, J = 5.8, 1.8 Hz, 1H), 2.37 (d, J = 2.8 Hz, 3H). Step 2: Preparation of (E)-5-bromo-2,3-difluoro-4-methylbenzaldehyde oxime [0247] To a mixture of 5-bromo-2,3-difluoro-4-methylbenzaldehyde (24 g, 0.10 mol), NH2OH.HCl (8.58 g, 0.12 mol) in THF (300 mL) was added K2CO3 (16.56 g, 0.12 mol). The mixture was stirred at 40oC for 16 h. The mixture was filtered and the filtrate was diluted with EA (300 mL), the combined organic layer was washed with brine (500 mL), dried over Na2SO4, filtered and concentrated in vacuo to give title product (20 g, 80.32%) as a yellow oil. ESI-MS (M+H) +: 293.0. 1H NMR (400 MHz, DMSO-d6) δ 11.89 (s, 1H), 8.17 (s, 1H), 7.72 (dd, J = 6.0, 1.8 Hz, 1H), 2.32 (d, J = 2.6 Hz, 3H). Step 3: Preparation of 5-bromo-7-fluoro-6-methyl-1H-indazole [0248] To a mixture of (E)-5-bromo-2,3-difluoro-4-methylbenzaldehyde oxime (20 g, 0.08 mol) in 1.4-dioxane (200 mL) was added N2H4.H2O (20.48 g, 0.64 mol). The mixture was stirred at 150 oC for 10 h. The mixture was diluted with H2O (300 mL) and extracted with EA (300 mL x 3). The organic phase was washed with brine (300 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (15.1 g, 82.79%) as a white solid. ESI-MS (M+H) +: 230.9. 1H NMR (400 MHz, DMSO-d6) δ 8.11 (d, J = 3.4 Hz, 1H), 7.91 (s, 1H), 2.38 (d, J = 2.7 Hz, 3H). Step 4: Preparation of 5-bromo-7-fluoro-2,6-dimethyl-2H-indazole [0249] To a mixture of 5-bromo-7-fluoro-6-methyl-1H-indazole (15.1 g, 0.07 mol) in THF (200 mL) was added NaH (5.6 g, 0.14 mol) at 0 oC, the mixture was stirred at this temperature for 30 min. CH3I (29.82 g, 0.21 mol) was added to the mixture and stirred at r.t for 4 h. The mixture was diluted with H2O (100 mL) and extracted with EA (200 mL x 2). The organic phase was washed with brine (200 mLx3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (7.4 g, 47.04%) as a white solid. ESI- MS (M+H) +:245.0. 1H NMR (400 MHz, DMSO-d6) δ 8.40 (d, J = 2.8 Hz, 1H), 7.88 (s, 1H), 4.18 (s, 3H), 2.34 (d, J = 3.0 Hz, 3H). Step 5: Preparation of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0250] To a mixture of 5-bromo-7-fluoro-2,6-dimethyl-2H-indazole (3 g, 12.3 mmol), diphenylmethanimine (2.69 g, 14.88 mmol) in 1,4-dioxane (50 mL) were added Pd2(dba)3 (1.12 g, 1.23 mmol), BINAP (1.53 g, 2.46 mmol) and Cs2CO3 (8.02 g, 24.6 mmol), the mixture was charged with Ar for three times and stirred at 115oC for 16 h. The mixture was diluted with H2O (50 mL) and extracted with EA (50 mL x 3). The organic phase was washed with brine (50 mLx3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 4/1) to afford title product (3.5 g, 82.96%) as a yellow solid. ESI-MS (M+H) +:344.1. 1H NMR (400 MHz, DMSO-d6) δ 8.07 (s, 1H), 7.70 (d, J = 7.2 Hz, 2H), 7.50 (dt, J = 13.3, 6.7 Hz, 4H), 7.34 – 7.25 (m, 3H), 7.15 (d, J = 6.9 Hz, 2H), 6.40 (s, 1H), 4.05 (s, 3H), 2.17 (s, 3H). Step 6: Preparation of 7-fluoro-2,6-dimethyl-2H-indazol-5-amine hydrochloride [0251] A mixture of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (3.5 g, 10.20 mmol) in 3M EA / HCl (50 mL) was stirred at r.t for 2 h. The precipitate was filtered to give title product (1.6 g, 87.63%) as a yellow solid. ESI-MS (M+H) +: 180.0. 1H NMR (400 MHz, DMSO-d6) δ 10.57 (s, 2H), 8.55 (d, J = 2.4 Hz, 1H), 7.78 (s, 1H), 4.20 (s, 3H), 2.36 (s, 3H). Step 7: Preparation of tert-butyl 4-(1-((7-fluoro-2,6-dimethyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate [0252] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (100 mg, 0.33 mmol) and 7-fluoro-2,6-dimethyl-2H-indazol-5-amine (160 mg, 0.97 mmol) in THF (2 mL) were added TEA (98 mg, 0.97 mmol) and triphosgene (292 mg, 0.97 mmol) at 0oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (EA) to give title product (40 mg, 24%) as a yellow solid. ESI-MS (M+H) +: 510.2. 1H NMR (400 MHz, DMSO-d6) δ 11.66 (s, 1H), 8.32 (d, J = 2.9 Hz, 1H), 8.12 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.14 (s, 3H), 4.00 (t, J = 8.5 Hz, 2H), 3.47 – 3.42 (m, 4H), 3.29 – 3.26 (m, 4H), 3.14 (t, J = 8.7 Hz, 2H), 2.35 (s, 3H), 1.43 (s, 9H). Step 8: Preparation of N-(7-fluoro-2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate [0253] To a mixture of tert-butyl 4-(1-((7-fluoro-2,6-dimethyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / ACN) to give title product (8.16 mg, yield: 25 %) as a white solid. ESI-MS (M+H) +: 410.5. 1H NMR (400 MHz, DMSO-d6) δ 11.68 (s, 1H), 8.32 (s, 1H), 8.23 (s, 1H), 8.12 (s, 1H), 7.90 (d, J = 6.0 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.14 (s, 3H), 3.99 (t, J = 8.4 Hz, 2H), 3.29 – 3.23 (m, 4H), 3.12 (t, J = 8.4 Hz, 2H), 2.91 – 2.81 (m, 4H), 2.35 (s, 3H). Example 9 – Preparation of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 9)
Figure imgf000188_0001
Step 1: Preparation of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0254] To a mixture of 5-bromo-7-methoxy-2-methyl-2H-indazole (5.5 g, 22.92 mmol) in 1,4-dioxane (60 mL) were added diphenylmethanimine (4.98 g, 27.50 mmol), BINAP (2.86 g, 4.58 mmol), Cs2CO3 (14.94 g, 45.84 mmol), Pd(OAc)2 (517.54 mg, 2.29 mmol), the mixture was stirred at 100 oC for 16 h under N2. The mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layers were washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE : EA = 4:1) to give the title compound (3.0 g, Y: 38.38 %) as a yellow oil. ESI-MS (M+H)+:342.2. Step 2: Preparation of 7-methoxy-2-methyl-2H-indazol-5-amine HCl salt [0255] A mixture of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (3.0 g, 8.80 mmol) in 4 M HCl / EA (40 mL) was stirred at RT for 16 h. The mixture was filtered and the residue was diluted with PE / EA (v:v=1:1, 20 mL) and stirred at RT for 2 h. The precipitate was filtered and dried to give the title compound (1.30 g, Y: 83.45 %) as a white oil. ESI-MS (M+H)+:178.3. 1H NMR (400 MHz, DMSO-d6) δ 10.16 (s, 2H), 8.38 (s, 1H), 7.90 (s, 1H), 7.17 (s, 1H), 4.12 (s, 3H), 3.92 (s, 3H). Step 3: Preparation of tert-butyl 4-(1-((7-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0256] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) in THF (5 mL) were added TEA (199 mg, 1.97 mmol), triphosgene (117 mg, 0.39 mmol), 7-methoxy-2-methyl-2H-indazol-5-amine HCl salt (70 mg, 0.39 mmol). The mixture was stirred at RT for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE / EA=2:1) to give the title compound (50 mg, Y: 29.9 %) as a yellow solid. ESI-MS (M+H)+:508.2. 1H NMR (400 MHz, DMSO-d6) δ 12.07 (s, 1H), 8.09 (s, 1H), 8.00 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.00 – 6.99 (m, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.06 (s, 6H), 3.47 – 3.43 (m, 4H), 3.41 – 3.39 (m, 2H), 3.27 – 3.26 (m, 2H), 3.15 – 3.09 (m, 4H), 1.43 (s, 9H). Step 4: Preparation of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0257] To a solution of tert-butyl 4-(1-((7-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (3.49 mg, 9.8 %) as a white solid. ESI-MS (M+H)+:408.2. 1H NMR (400 MHz, MeOD-d4) δ 8.50 (s, 1H), 8.40 – 8.37 (m, 1H), 8.02 (d, J = 5.8 Hz, 1H), 7.99 (s, 1H), 6.97 (s, 1H), 6.56 (d, J = 6.0 Hz, 1H), 4.12 (s, 3H), 4.11 – 4.08 (m, 2H), 4.02 (s, 3H), 3.47 – 3.42 (m, 4H), 3.28 – 3.25 (m, 4H), 3.17 – 3.13 (m, 2H).
Example 10 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 10) NH
Figure imgf000190_0001
Compound 10 Step 1: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine [0258] To a solution of 6-bromo-8-fluoro-2-methylimidazo[1,2-a]pyridine (3 g, 13.10 mmol), diphenylmethanimine (2.85 g, 15.72 mmol), Cs2CO3 (12.80 g, 39.29 mmol) and Pd(OAc)2 (29.40 mg, 0.13 mmol) in 1,4-dioxane (25 mL) was added BINAP (163 mg, 0.26 mmol), the mixture was stirred at 100 oC for 16 h under N2. The mixture was concentrated in vacuo, the residue was purified by silica gel column chromatography (PE: EA= 4 : 1) to give title product (3.9 g, 90.40 %) as a yellow solid. ESI-MS (M+H) +: 330.2. Step 2: Preparation of 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine [0259] A solution of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (3.4 g, 10.32 mmol ) in 3M HCl / EA (35 mL) was stirred at RT for 2 h. The mixture was diluted with sat. Na2CO3 (100 mL), extracted with EA (60 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The residue was purified by silica gel column chromatography (PE : EA= 1 : 9) to give title product (1.2 g, 70.38%) as a grey solid. ESI-MS (M+H) +: 166.1. 1H NMR (400 MHz, CDCl3) δ 7.28 (d, J = 1.5 Hz, 1H), 7.16 (d, J = 1.3 Hz, 1H), 6.42 (dd, J = 11.4, 1.7 Hz, 1H), 2.35 (s, 3H). Step 3: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0260] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (60 mg, 0.19 mmol) and 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (130 mg, 0.78 mmol) in DCM (5 mL) were added TEA (119 mg, 1.18 mmol) and triphosgene (223 mg, 0.78 mmol) at 0 oC. The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was purified by silica gel column chromatography (PE: EA= 1: 1) to give title product (65 mg, crude) as a white solid. ESI-MS (M+H) +: 496.2. Step 4: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0261] To a mixture of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (42 mg, 0.08 mmol) in EA (3 mL) was added 3M HCl / EA (0.5 mL). The mixture was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (2.65 mg, Y: 7.91 %) as a white solid. ESI-MS (M+H) +: 396.1. 1H NMR (400 MHz, MeOD-d4) δ 8.61 (s, 1H), 8.19 (s, 1H), 7.88 (d, J = 5.9 Hz, 1H), 7.54 (t, J = 6.8 Hz, 1H), 7.01 (d, J = 12.0 Hz, 1H), 6.45 (d, J = 6.0 Hz, 1H), 3.94 (t, J = 8.5 Hz, 2H), 3.48 – 3.38 (m, 4H), 3.30 – 3.24 (m, 4H), 3.00 (t, J = 8.4 Hz, 2H), 2.30 (s, 3H). Example 11 – Preparation of N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) -4- (piperazin-1-yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide diformate (Compound 11)
Figure imgf000191_0001
Figure imgf000192_0001
Step 1: Preparation of 6-bromo-8-methoxy-2-methylimidazo[1,2-a] pyridine [0262] To a mixture of 5-bromo-3-methoxypyridin-2-amine (15 g, 13.89 mmol) in IPA (150 mL) were added 1-bromo-2,2-dimethoxypropane (21.64 g, 118.23 mmol) and PPTS (1847 mg, 7.39 mmol). The reaction solution was stirred at 95 ℃ for 5 h. The reaction was diluted with DCM (300 mL), washed with brine (300 mL x 3), the organic layer was concentrated in vacuo to give title product (12 g, yield: 67%) as a brown solid. ESI-MS (M+H) +: 243.0. 1H NMR (400 MHz, DMSO-d6) δ 8.85 (d, J = 7.0 Hz, 1H), 8.04 (d, J = 8.7 Hz, 1H), 7.55 (s, 1H), 4.09 (s, 3H), 2.43 (d, J = 20.5 Hz, 3H). Step 2: Preparation of N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine [0263] To a mixture of 6-bromo-8-methoxy-2-methylimidazo[1,2-a] pyridine (5 g, 20.75 mmol) and diphenylmethanimine (5.6 g, 31.12 mmol) in 1,4-dioxane (50 mL) were added BINAP (2.5 g, 4.15 mmol), Pd(OAc)2 (467 mg, 2.08 mmol) and Cs2CO3 (20.3 g, 62.25 mmol). The reaction solution was stirred at 100 ℃ for 16 h under N2. The reaction was diluted with H2O (50 mL), extracted with EA (50 mL x 3), the organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA=1:1) to give title product (4.7 g, yield: 66%) as a brown oil. ESI-MS (M+H)+: 342.2. 1H NMR (400 MHz, DMSO-d6) δ 7.71 – 7.66 (m, 2H), 7.57 – 7.53 (m, 2H), 7.50 – 7.44 (m, 3H), 7.39 – 7.35 (m, 3H), 7.26 – 7.21 (m, 2H), 6.11 (d, J = 1.5 Hz, 1H), 3.66 (s, 3H), 2.22 (s, 3H). Step 3: Preparation of 8-methoxy-2-methylimidazo[1,2-a] pyridin-6-amine hydrochloride [0264] To a mixture of N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine (4.2 g, 12.32 mmol) in EA (20 mL) was added 4M HCl / EA (40 mL). The reaction solution was stirred at RT for 2 h. The mixture was filtered, washed with EA (20 mL) and dried in vacuo. The residue was beated with PE: EA (1:1, 20 mL) to give title product (2 g, 83%) as a white solid. ESI-MS (M+H)+: 178.0. 1H NMR (400 MHz, DMSO- d6) δ 8.08 – 7.95 (m, 1H), 7.91 – 7.77 (m, 1H), 7.16 – 7.02 (m, 1H), 6.03 (s, 3H), 4.02 (s, 3H), 2.40 (s, 3H). Step 4: Preparation of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate [0265] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (100 mg, 0.33 mmol) and 8-methoxy-2-methylimidazo[1,2-a] pyridin-6-amine hydrochloride (175 mg, 0.97 mmol) in THF (3 mL) were added TEA (98 mg, 0.97 mmol) and triphosgene (288 mg, 0.97 mmol) at 0 oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (EA) to give title product (67 mg, 40%) as a yellow solid. ESI-MS (M+H)+: 508.3. Step 5: Preparation of N-(8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) -4-(piperazin-1- yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide diformate [0266] To a mixture of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL × 3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / ACN) to give title product (24.18 mg, yield: 75 %) as a white solid. ESI-MS (M+H)+: 408.2. 1H NMR (400 MHz, DMSO-d6) δ 11.64 (s, 1H), 8.58 (d, J = 1.1 Hz, 1H), 8.27 (s, 2H), 7.94 (d, J = 6.1 Hz, 1H), 7.65 (s, 1H), 6.62 – 6.47 (m, 2H), 4.00 – 3.96 (m, 2H), 3.94 (s, 3H), 3.33 – 3.26 (m, 4H), 3.11 (t, J = 8.5 Hz, 2H), 2.98 – 2.83 (m, 4H), 2.28 (s, 3H). Example 12 – Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 12)
Figure imgf000194_0001
Step 1: Preparation of 5-bromo-2,7-dimethyl-2H-indazole [0267] To a mixture of 5-bromo-7-methyl-2H-indazole (9.00 g, 42.65 mmol) in EA (150 mL) was added trimethyloxonium tetrafluoroborate (9.47 g, 68.98 mmol). The mixture was stirred at r.t for 2 h. The mixture was diluted with water (300 mL), extracted with EA (200 mL×2), the organic layer washed with brine, dried with Na2SO4 and concentration in vacuo to give title product (9.5 g, 96 %) as a white solid. ESI-MS (M+H)+: 225.1. 1 H NMR (400 MHz, DMSO-d6) δ 8.29 (s, 1H), 7.76 – 7.74 (m, 1H), 7.12 – 7.10 (m, 1H), 4.17 (s, 3H), 2.49 – 2.48 (m, 3H). Step 2: Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0268] A mixture of 5-bromo-2,7-dimethyl-2H-indazole (5 g, 22.22 mmol) in 1,4-dioxane (50 mL) were added diphenylmethanimine (4.22 g, 23.33 mmol), BINAP (2.77 g, 4.44 mmol), Cs2CO3 (14.48 g, 44.44 mmol), Pd(OAc)2 (499 mg, 2.22 mmol). The mixture was stirred at 115 °C for 16 h. The mixture was diluted with H2O (50 mL) and extracted with EA (50 mL x 3). The organic phase washed with brine (100 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The crude product was purified by silica gel column (PE/EA=5:1) to afford title product (1.24 g, 17 %) as a white solid. ESI-MS (M+H)+ : 326.3. 1H NMR (400 MHz, DMSO-d6) δ 8.02 (s, 1H), 7.67 – 7.63 (m, 2H), 7.54 – 7.44 (m, 3H), 7.33 – 7.27 (m, 3H), 7.17 – 7.13 (m, 2H), 6.60 – 6.54 (m, 2H), 4.06 (s, 3H), 2.35 (s, 3H). Step 3: Preparation of 2,7-dimethyl-2H-indazol-5-amine hydrochloride [0269] To a solution of N-(2,7-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (924 mg, 2.84 mmol) in 3M HCl / EA (10 mL) was stirred at r.t for 4 h. The precipitate was filtered to give title product (500 mg, 89 %) as a white solid. ESI-MS (M+H)+ : 162.1. 1H NMR (400 MHz, DMSO-d6) δ 10.20 (s, 2H), 8.42 (s, 1H), 7.58 (d, J = 1.3 Hz, 1H), 6.95 (dd, J = 1.9, 1.1 Hz, 1H), 4.19 (s, 3H), 2.53 (s, 3H). Step 4: Preparation of tert-butyl 4-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0270] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 2,7-dimethyl-2H-indazol-5-amine (110 mg, 0.66 mmol) in THF (10 mL) were added triethylamine (0.25 mL, 1.65 mmol) and triphosgene (200 mg, 0.66 mmol) at 0 oC. The mixture was stirred at RT for 16 h. The precipitate was filtered and dried in vacuum to give title product (60 mg, yield: 37.03%) as a white solid. ESI-MS (M+H)+: 492.2. 1H NMR (400 MHz, DMSO-d6) δ 11.66 (s, 1H), 8.18 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.84 (d, J = 1.4 Hz, 1H), 6.97 (s, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 3.97 (t, J = 8.9 Hz, 2H), 3.44 (d, J = 4.9 Hz, 4H), 3.29 – 3.24 (m, 4H), 3.11 (t, J = 8.5 Hz, 2H), 2.48 (s, 3H), 1.43 (s, 9H). Step 5: Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide [0271] A mixture of tert-butyl 4-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.12 mmol) in 3M HCl / EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% NH3·H2O in H2O / ACN) to give title product (33.28 mg, yield: 70.92%) as a white solid. ESI-MS (M+H)+: 392.2. 1H NMR (400 MHz, DMSO-d6) δ 11.65 (s, 1H), 8.18 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.84 (s, 1H), 6.97 (s, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 3.99 (t, J = 8.5 Hz, 2H), 3.38 – 3.35 (m, 4H), 3.11 (t, J = 8.5 Hz, 2H), 3.05 – 2.99 (m, 4H), 2.49 (s, 3H). Example 13 – Preparation of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2- trifluoroacetate (Compound 13)
Figure imgf000196_0001
Step 1: Preparation of methyl 2-amino-5-bromo-3-methylbenzoate [0272] To a mixture of methyl 2-amino-3-methylbenzoate (5 g, 30.30 mmol) in DCM (40 mL) was added NBS (5.9 g, 33.34 mmol). The resulting mixture was stirred at RT for 16 h. The mixture was diluted with water (40 mL), extracted with DCM (40 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (7 g, crude) as a brown solid. ESI-MS (M+H) +: 244.0. 1H NMR (400 MHz, DMSO- d6) δ 7.70 (d, J = 2.4 Hz, 1H), 7.35 (dd, J = 2.4, 0.7 Hz, 1H), 6.53 (s, 2H), 3.79 (s, 3H), 2.13 (s, 3H). Step 2: Preparation of methyl 5-bromo-1H-indazole-7-carboxylate [0273] To a mixture of methyl 2-amino-5-bromo-3-methylbenzoate (5 g, 20.57 mmol) and KOAc (2116 mg, 21.59 mmol) in CHCl3 (50 mL) was added Ac2O (4 mL). The resulting mixture was stirred at 0 o C for 1 h. Isopentylnitrite (6 mL, 45.25 mmol) and 18-crown-6 (977 mg, 3.70 mmol) were added to the mixture. The resulting mixture was stirred at RT for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo to give title product (5 g, crude) as a white solid. ESI-MS (M+H+CH3CN) +: 297.9. 1H NMR (400 MHz, DMSO-d6) δ 8.36 (d, J = 1.8 Hz, 1H), 8.28 – 8.23 (m, 1H), 8.02 (d, J = 1.8 Hz, 1H), 3.98 (s, 3H). Step 3: Preparation of methyl 5-bromo-2-methyl-2H-indazole-7-carboxylate [0274] To a mixture of methyl 5-bromo-1H-indazole-7-carboxylate (10.5 g, 41.18 mmol) in EA (100 mL) was added trimethyloxonium tetrafluoroborate (9.14 g, 61.76 mmol). The resulting mixture was stirred at RT for 2 h. The mixture was diluted with water (100 mL), extracted with EA (100 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (9.43 g, 85%) as a yellow solid. ESI-MS (M+H) +: 269.0. 1H NMR (400 MHz, DMSO-d6) δ 8.53 (s, 1H), 8.30 (d, J = 1.9 Hz, 1H), 7.92 (d, J = 1.9 Hz, 1H), 4.24 (s, 3H), 3.90 (s, 3H). Step 4: Preparation of (5-bromo-2-methyl-2H-indazol-7-yl) methanol [0275] To a mixture of methyl 5-bromo-2-methyl-2H-indazole-7-carboxylate (7 g, 26.02 mmol) in dry-THF (70 mL) was added LiAlH4 (52 mL, 52.04 mmol, 1.0 M in THF). The resulting mixture was stirred at 0 o C for 2 h. The mixture was quenched by water (2 mL) dropwise at 0 o C. Then added 15% NaOH (2 mL) and water (6 mL). The mixture was diluted with THF (20 mL) and Na2SO4. The resulting mixture was stirred at RT for 0.15 h. The mixture was filtered and the filtrate cake was washed with EA (10 mL) and DCM/MeOH (20 mL, 10:1). The filtrate was concentrated in vacuo to give title product (6 g, 96%) as a white solid. ESI-MS (M+H) +: 241.0. Step 5: Preparation of 5-bromo-2-methyl-2H-indazole-7-carbaldehyde [0276] To a mixture of (5-bromo-2-methyl-2H-indazol-7-yl) methanol (5 g, 20.75 mmol) in DCM (50 mL) was added Dess-Martin periodinane (10.5 g, 24.89 mmol). The resulting mixture was stirred at RT for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo. The crude was purified by silica gel column (PE/EA=1:1) to give title product (2 g, Y: 40.8 %) as a yellow solid. ESI-MS (M+H) +:239.0. 1H NMR (400 MHz, DMSO- d6) δ 10.43 (d, J = 26.9 Hz, 1H), 8.59 (s, 1H), 8.38 (d, J = 1.7 Hz, 1H), 7.98 – 7.87 (m, 1H), 4.26 (s, 3H). Step 6: Preparation of 5-bromo-7-(difluoromethyl)-2-methyl-2H-indazole [0277] To a mixture of 5-bromo-2-methyl-2H-indazole-7-carbaldehyde (1.8 g, 7.56 mmol) in DCM (15 mL) was added DAST (2069 mg, 12.86 mmol) at 0 oC. The resulting mixture was stirred at RT under N2 (balloon) for 16 h. The mixture was quenched by sat. NaHCO3 (15 mL) at 0 o C, extracted with DCM (15 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE / EA=2:1) to give title product (1.43 g, Y: 72 %) as a white solid. ESI-MS (M+H) +:241.0. 1H NMR (400 MHz, DMSO-d6) δ 8.50 (d, J = 4.4 Hz, 1H), 8.18 (s, 1H), 7.52 (dd, J = 30.9, 3.0 Hz, 1H), 7.32 (t, J = 54.7 Hz, 1H), 4.23 (s, 3H). Step 7: Preparation of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine [0278] To a mixture of 5-bromo-7-(difluoromethyl)-2-methyl-2H-indazole (5 g, 19.16 mmol) and diphenylmethanimine (5.2 g, 28.75 mmol) in 1,4-dioxane (50 mL) were added BINAP (2387 mg, 3.83 mmol), Pd(OAc)2 (431 mg, 1.92 mmol) and Cs2CO3 (18.68 g, 57.48 mmol). The reaction solution was stirred at 100 ℃ for 16 h. The reaction was diluted with H2O (50 mL), extracted with EA (50 mL x 3). The organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE : EA = 5 :1) to give title product (4.3 g, yield: 62.3%) as a yellow solid. ESI-MS (M+H)+: 362.1. 1H NMR (400 MHz, DMSO-d6) δ 8.24 (s, 1H), 7.71 – 7.66 (m, 2H), 7.55 – 7.45 (m, 4H), 7.34 – 7.29 (m, 3H), 7.19 – 7.16 (m, 2H), 7.05 – 6.97 (m, 2H), 4.12 (s, 3H). Step 8: Preparation of 7-(difluoromethyl)-2-methyl-2H-indazol-5-amine hydrochloride [0279] To a mixture of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine (4 g, 11.08 mmol) in EA (20 mL) was added 4M HCl / EA (40 mL). The reaction solution was stirred at RT for 2 h. The precipitate was filtered, washed with EA (20 mL) and dried in vacuo. The crude was diluted with PE : EA (1 : 1, 20 mL) and stirred at RT for 1 h. The precipitate was filtered and dried in vacuo to give title product (2 g, 77.5%) as a yellow solid. ESI-MS (M+H)+: 198.2. 1H NMR (400 MHz, DMSO-d6) δ 10.65 (s, 2H), 8.63 (s, 1H), 8.02 (s, 1H), 7.50 (s, 1H), 7.43 – 7.28 (m, 1H), 4.25 (s, 3H). Step 9: Preparation of tert-butyl 4-(1-((7-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate [0280] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (80 mg, 0.26 mmol) and 7-(difluoromethyl)-2-methyl-2H-indazol-5-amine hydrochloride (156 mg, 0.79 mmol) in THF (2 mL) were added TEA (80 mg, 0.79 mmol) and triphosgene (193 mg, 0.65 mmol) at 0 oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (120 mg, 28%) as a brown solid. ESI-MS (M+H)+: 528.3. Step 10: Preparation of N-(7-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate [0281] To a mixture of tert-butyl 4-(1-((7-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (100 mg, 0.19 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / ACN) to give title product (11.50 mg, yield: 13 %) as a white solid. ESI-MS (M+H)+: 428.2. 1H NMR (400 MHz, DMSO-d6) δ 8.88 (s, 2H), 8.41 (s, 1H), 8.09 (s, 1H), 7.96 (s, 1H), 7.61 (s, 1H), 7.34 (t, J = 55.0 Hz, 1H), 6.67 (s, 1H), 4.19 (s, 3H), 4.12 – 4.03 (m, 2H), 3.63 – 3.49 (m, 4H), 3.27 – 3.22 (m, 4H), 3.22 – 3.15 (m, 2H). Example 14 – Preparation of N-(7-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 14)
Figure imgf000199_0001
Figure imgf000200_0001
Step 1: Preparation of 5-bromo-2-methyl-7-(trifluoromethyl)-2H-indazole [0282] To a mixture of 5-bromo-7-(trifluoromethyl)-1H-indazole (10 g, 37.74 mmol) in EA (100 mL) was added trimethyloxonium tetrafluoroborate (27.9 g, 188.68 mmoL). The mixture was stirred at RT for 16 h. The mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3). The combined organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo to give the title compound (9 g, Y: 85.5 %). ESI-MS (M+H)+:279.1. 1H NMR (400 MHz, DMSO-d6) δ 8.59 (s, 1H), 8.33 (s, 1H), 7.72 (s, 1H), 4.28 (s, 3H). Step 2: Preparation of N-(2-methyl-7-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine [0283] To a mixture of 5-bromo-2-methyl-7-(trifluoromethyl)-2H-indazole (4.5 g, 16.13 mmol) in 1,4-dioxane (50 mL) were added diphenylmethanimine (4.4 g, 24.19 mmol), BINAP (2.0 g, 3.23 mmol), Cs2CO3 (10.5 g, 32.26 mmol), Pd(OAc)2 (363 mg, 1.61 mmol), the mixture was charged with N2 for three times and stirred at 120 oC for 16 h under N2. The mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA = 4:1) to give the title compound (5 g, Y: 81.8 %) as a yellow oil. ESI-MS (M+H)+:380.2. 1H NMR (400 MHz, DMSO-d6) δ 8.33 (s, 1H), 7.71 (s, 1H), 7.70 – 7.69 (m, 1H), 7.56 – 7.53 (m, 1H), 7.50 – 7.46 (m, 2H), 7.33 – 7.30 (m, 3H), 7.21 (s, 1H), 7.20 – 7.17 (m, 2H), 7.10 (s, 1H), 4.14 (s, 3H). Step 3: Preparation of 2-methyl-7-(trifluoromethyl)-2H-indazol-5-amine HCl salt [0284] To a mixture of N-(2-methyl-7-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine (4 g, 10.55 mmol) in EA (40 mL) was added 4M HCl / EA (40 mL). The mixture was stirred at RT for 16 h. The mixture was filtered and the residue was diluted with PE / EA (v:v=1:1, 20 mL) and stirred at RT for 2 h. The precipitate was filtered and dried to give the title compound (2.1 g, Y: 92.5 %) as a white solid. ESI-MS (M+H)+:216.2. 1H NMR (400 MHz, DMSO-d6) δ 10.34 (s, 2H), 8.68 (s, 1H), 8.09 (s, 1H), 7.67 (s, 1H), 4.27 (s, 3H). Step 4: Preparation of tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0285] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (120 mg, 0.39 mmol) in THF (5 mL) were added TEA (239 mg, 2.37 mmol), triphosgene (141 mg, 0.47 mmol), 2-methyl-7-(trifluoromethyl)-2H-indazol-5-amine HCl salt (85 mg, 0.39 mmol). The mixture was stirred at RT for 16 h. The mixture was diluted with water (20 mL) and extracted with EA (20 mL x 3). The combined organic layer was washed with brine (30 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA = 3:1) to give the title compound (100 mg, Y: 46.4 %) as a yellow solid. ESI-MS (M+H)+:546.2. 1H NMR (400 MHz, DMSO-d6) δ 11.90 (s, 1H), 8.47 (s, 1H), 8.16 (s, 1H), 7.97 (d, J = 6.1 Hz, 1H), 7.83 (s, 1H), 6.54 (d, J = 6.3 Hz, 1H), 4.21 (s, 3H), 4.02 – 3.97 (m, 2H), 3.46 – 3.43 (m, 4H), 3.30 – 3.28 (m, 4H), 3.14 – 3.11 (m, 2H), 1.43 (s, 9H). Step 5: Preparation of N-(2-methyl-7-(trifluoromethyl)-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0286] To a solution of tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.15 mmol) in EA (3 mL) was added 4M HCl / EA (3 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (3.52 mg, 4.9 %) as a white solid. ESI-MS (M+H)+: 446.2. 1H NMR (400 MHz, MeOD-d4) δ 8.50 (s, 1H), 8.28 (s, 1H), 8.14 (s, 1H), 8.03 (d, J = 6.0 Hz, 1H), 7.76 (s, 1H), 6.58 (d, J = 6.1 Hz, 1H), 4.24 (s, 3H), 4.12 – 4.08 (m, 2H), 3.47 – 3.44 (m, 4H), 3.28 – 3.25 (m, 4H), 3.16 (t, J = 8.5 Hz, 2H). Example 15 – Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 15)
Figure imgf000202_0001
Step 1: Preparation of 5-bromo-2-fluoro-4-methoxybenzaldehyde [0287] To a solution of 2-fluoro-4-methoxybenzaldehyde (50 g, 324.7 mol) in MeOH (500 mL), Br2 (103.9 g, 649.4 mol) was added dropwise at 0 oC, the mixture was stirred for 16 h at RT. The mixture was diluted with sat. Na2SO3 (1000 mL) at 0 oC, and stirred for 1 hour. The precipitate was filtered, washed with water and dried under vacuum to give crude product (66 g, 87.2 %) as a white solid, which was used to next step without further purification. 1H NMR (400 MHz, DMSO-d6) δ 10.03 (s, 1H), 7.99 (d, J = 7.5 Hz, 1H), 7.26 (d, J = 12.7 Hz, 1H), 3.98 (s, 3H). Step 2: Preparation of (E)-5-bromo-2-fluoro-4-methoxybenzaldehyde oxime [0288] To a solution of 5-bromo-2-fluoro-4-methoxybenzaldehyde (100 g, 429.2 mmol) in THF (1000 mL) was added NH2OH·HCl (35.5 g, 515 mmol) and K2CO3 (71.1 g, 515 mmol). The mixture was stirred at 40 ℃ for 16 h. The mixture was concentrated in vacuo to give crude. The crude was diluted with water (1000 mL) and stirred at r.t for 30 min, the precipitate was filtered and dried under vacuum to give crude title product (98 g, Y: 92.4%) as a white solid which was used to next step without further purification. ESI-MS (M+H) +: 248.0. 1H NMR (400 MHz, DMSO-d6) δ 11.54 (s, 1H), 8.14 – 8.08 (m, 1H), 7.89 – 7.82 (m, 1H), 7.18 – 7.08 (m, 1H), 3.91 (s, 3H). Step 3: Preparation of 5-bromo-6-methoxy-1H-indazole [0289] To a solution of (E)-5-bromo-2-fluoro-4-methoxybenzaldehyde oxime (50 g, 202.4 mmol) in 1,4-dioxane (500 mL) was added N2H4 .H2O (75.8 g, 1516 mmol). The mixture was stirred at 145℃ for 24 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA= 4:1) to give title product (20 g, Y: 43.7 %) as a yellow solid. ESI-MS (M+H) +: 228.9. 1H NMR (400 MHz, DMSO-d6) δ 8.00 (s, 1H), 7.94 (s, 1H), 7.08 (s, 1H), 3.91 (s, 3H). Step 4: Preparation of 5-bromo-6-methoxy-2-methyl-2H-indazole [0290] To a solution of 5-bromo-6-methoxy-1H-indazole (30 g, 132 mmol) in EA (900 mL) was added BF4.OMe3 (29.3 g, 198 mmol). The mixture was stirred for 2 h at RT. The mixture was concentrated in vacuo and diluted with water (400 mL), extracted with EA (400 mL x 3). The organic phase was washed with brine (300 mL), dried over Na2SO4 and concentrated to give title product (25 g, Y: 78.6%) as a yellow solid which was used to next step without further purification. ESI-MS (M+H)+: 241.0. 1H NMR (400 MHz, DMSO-d6) δ 8.22 (s, 1H), 7.98 (s, 1H), 7.09 (s, 1H), 4.11 (s, 3H), 3.87 (s, 3H). Step 5: Preparation of methyl 5-bromo-2-methyl-2H-indazol-6-ol [0291] A mixture of 5-bromo-6-methoxy-2-methyl-2H-indazole (20 g, 83.3 mmol) in BBr3 (1M, 400 mL, 400 mmol) was stirred at r.t for 16 h. The mixture was quenched with MeOH (300 mL) at 0 oC and concentrated in vacuo. The residue was diluted with sat.Na2CO3 (300 mL) and stirred for 16 h. The precipitate was filtered and dried under vacuum to afford title compound (16 g, 85.4% yield) as a yellow solid. ESI-MS (M+H) +: 229.0. 1H NMR (400 MHz, DMSO-d6) δ 8.07 (s, 1H), 7.83 (s, 1H), 6.85 (s, 1H), 4.02 (s, 3H). Step 6: Preparation of 5-bromo-6-ethoxy-2-methyl-2H-indazole [0292] To a solution of 5-bromo-2-methyl-2H-indazol-6-ol (50 g, 221 mmol) in DMF (1000 mL) was added K2CO3 (91.5 g, 663 mmol), CH3CH2I (87.3 g, 552.5 mmol) was added at 0 oC, the mixture was stirred at r.t for 16 h. The mixture was diluted with water (3000 mL), the precipitate was filtered, washed with water and dried to afford title compound (47 g, 83.3% yield) as an off-white solid. ESI-MS (M+H)+:257.0. 1H NMR (400 MHz, DMSO-d6) δ 8.21 (s, 1H), 7.97 (s, 1H), 7.06 (s, 1H), 4.15 – 4.05 (m, 5H), 1.39 (t, J = 6.9 Hz, 3H). Step 7: Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine [0293] To a solution of 5-bromo-6-ethoxy-2-methyl-2H-indazole (3 g, 11.76 mmol), diphenylmethanimine (2.56 g, 14.11 mmol), Cs2CO3 (11.49 g, 35.28 mmol) and Pd(OAc)2 (26.40 mg, 0.12 mmol) in 1,4-dioxane (50 mL) was added BINAP (146 mg, 0.23 mmol), the mixture was stirred at 100 oC for 16 h under N2. The mixture was concentrate in vacuo, the residue was purified by silica gel column chromatography (PE : EA= 1 : 4) to give title product (2.2 g, 52.63 %) as a yellow solid. ESI-MS (M+H) +: 356.3. 1H NMR (400 MHz, CDCl3) δ 7.74 – 7.68 (m, 2H), 7.50 (s, 1H), 7.40 (s, 1H), 7.34 (d, J = 7.6 Hz, 2H), 7.15 – 7.06 (m, 5H), 6.74 (s, 1H), 6.68 (s, 1H), 3.99 (s, 3 H), 3.87 (q, J = 7.0 Hz, 2H), 1.28 (t, J = 7.0 Hz, 3H). Step 8: Preparation of 6-ethoxy-2-methyl-2H-indazol-5-amine [0294] A solution of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (2.0 g, 5.63 mmol ) in 3M HCl / EA (15 mL) was stirred at RT for 2 h. The mixture was diluted with sat. Na2CO3 (40 mL), extracted with EA (60 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The crude was purified by silica gel column chromatography (PE: EA= 1: 8) to give title product (800 mg, 74.35%) as a yellow solid. ESI-MS (M+H) +: 192.2. 1H NMR (400 MHz, CDCl3) δ 7.45 (s, 1H), 6.83 (s, 1H), 6.67 (s, 1H), 4.04 (q, J = 14.0, 7.0 Hz, 2H), 4.00 (s, 3H), 1.41 (t, J = 7.0 Hz, 3H). Step 9: Preparation of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0295] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 6-ethoxy-2-methyl-2H-indazol-5-amine (125 mg, 0.66 mmol) in THF (10 mL) were added TEA (199 mg, 1.97 mmol) and triphosgene (194 mg, 0.66 mmol) at 0oC. The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo, and the residue was purified by silica gel column chromatography (PE: EA= 1: 3) to give the compound (100 mg, 58.36%) as an off-white solid. ESI-MS (M+H) +: 522.3. 1H NMR (400 MHz, CDCl3) δ 11.95 (s, 1H), 8.53 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 7.66 (s, 1H), 6.91 (s, 1H), 6.29 (d, J = 6.0 Hz, 1H), 4.14 – 4.07 (m, 7H), 3.52 – 3.47 (m, 4H), 3.17 – 3.12 (m, 4H), 3.05 – 2.99 (m, 2H), 1.56 – 1.54 (m, 3H), 1.42 (s, 9H). Step 10: Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0296] To a mixture of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.17 mmol) in EA (5 mL) was added 3M HCl / EA (1.5 mL), the mixture was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / CN) to give title product (23 mg, Y: 31.63 %) as a white solid. ESI-MS (M+H) +: 422.2. 1H NMR (400 MHz, DMSO-d6) δ 12.01 (s, 1H), 8.44 (s, 1H), 8.29 (s, 1H), 8.11 (s, 1H), 7.87 (d, J = 5.8 Hz, 1H), 6.97 (s, 1H), 6.53 (d, J = 6.0 Hz, 1H), 4.16 – 4.11 (m, 2H), 4.05 (s, 3H), 4.02 – 3.97 (m, 2H), 3.34 – 3.23 (m, 4H), 3.10 (t, J = 8.2 Hz, 2H), 3.03 – 2.85 (m, 4H), 1.52 (t, J = 6.8 Hz, 3H). Example 16 – Preparation of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 16)
Figure imgf000205_0001
Step 1: Preparation of N-(4-bromo-2-methoxyphenyl)acetamide [0297] To a mixture of 4-bromo-2-methoxyaniline (20 g, 99.00 mmol) in EA (200 mL) was added Ac2O (15.14 g, 148.51 mmol) at 0 oC. The mixture was stirred at r.t for 3 h. The mixture was diluted with H2O (200 mL) and extracted with EA (200 mL x 3). The organic phase was washed with brine, dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (PE: EA=5:1) to give title product (23 g, 95.8%) as a white solid. ESI-MS (M+H) +: 244.0. 1H NMR (400 MHz, DMSO-d6) δ 9.22 (s, 1H), 7.91 (d, J = 8.6 Hz, 1H), 7.20 (d, J = 2.1 Hz, 1H), 7.08 (dd, J = 8.6, 2.1 Hz, 1H), 3.85 (s, 3H), 2.09 (s, 3H). Step 2: Preparation of 6-bromo-4-methoxy-2-methylbenzo[d]oxazole [0298] To a solution of N-(4-bromo-2-methoxyphenyl)acetamide (25 g, 102.88 mmol) in AcOH : DMF (180 mL : 22 mL) were added Pd(OAc)2 (2.5 g, 0.1wt), K2S2O8 (37.65 g, 154.32 mmol), TfOH (15.43 g, 102.88 mmol) at 0oC. The mixture was stirred at 100 oC for 16 h. The mixture was diluted with H2O (250 mL) and extracted with DCM (250 mL x 3). The organic phase was washed with brine, dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (PE: EA=9:1) to give title product (2.5 g, 10%) as a white solid. ESI-MS (M+H) +: 243.9. Step 3: Preparation of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine [0299] A mixture of 6-bromo-4-methoxy-2-methylbenzo[d]oxazole (250 mg, 1.00 mmol), Benzenemethanimine (280 mg, 1.55 mmol), Pd(OAc)2 (23 mg, 0.10 mmol) and BINAP (128.7 mg, 0.21 mmol) in 1,4-dioxane (5 mL) was purged with N2 for three times at RT. Then the mixture was stirred at 100 oC for 16 hours. The mixture was cooled to RT, filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=10:1) to provide title product (300 mg, yield: 88%) as a yellow solid. ESI-MS (M+H)+: 345.1. 1H NMR (400 MHz, CDCl3) δ 7.72 – 7.64 (m, 2H), 7.40 (t, J = 7.3 Hz, 1H), 7.33 (t, J = 7.4 Hz, 2H), 7.19 (t, J = 6.8 Hz, 3H), 7.06 (dd, J = 7.8, 1.6 Hz, 2H), 6.36 (d, J = 1.5 Hz, 1H), 6.15 (d, J = 1.5 Hz, 1H), 3.72 (s, 3H), 2.45 (s, 3H). Step 4: Preparation of 4-methoxy-2-methylbenzo[d]oxazol-6-amine [0300] To a solution of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine (280 mg, 0.82 mmol) in EA (1 mL) was added 4 M HCl / EA (3 mL) at 0 oC. Then the mixture was stirred at RT for 2 hours. The precipitate was filtered, washed with EA. Then adjusted pH to 8 with Na2CO3 aqueous, the precipitate was filtered and dried under vacuum to afford title product (124 mg, yield: 82%) as a white solid. ESI-MS (M+H)+: 179.1. Step 5: Preparation of tert-butyl 4-(1-((4-methoxy-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0301] To a solution of 4-methoxy-2-methylbenzo[d]oxazol-6-amine (53.4 mg, 0.30 mmol), tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.20 mmol) in THF (1.5 mL) were added TEA (0.12 mL, 0.60 mmol) and triphosgene (89 mg, 0.30 mmol) at 0 oC. Then the mixture was stirred at 60 oC for 16 hours. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to provide title product (80 mg, yield: 78%) as a white solid. ESI-MS (M+H)+: 509.2. 1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 7.95 (s, 1H), 7.62 (s, 1H), 6.95 (s, 1H), 6.55 (s, 1H), 3.97 (s, 3H), 3.47 – 3.41 (m, 4H), 3.31 – 3.26 (m, 6H), 3.12 (t, J = 8.2 Hz, 2H), 2.54 (s, 3H), 1.43 (s, 9H). Step 6: Preparation of N-(4-methoxy-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0302] To a solution of ert-butyl 4-(1-((4-methoxy-2-methylbenzo[d]oxazol-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) were added HMDS (32.2 mg. 0.20 mmol), TMSOTf (44.4 mg, 0.20 mmol) at 0 oC. Then the mixture was stirred at RT for 2 hours. The mixture was adjusted pH to 8 with Na2CO3 aqueous, extracted with DCM. The organic phase was concentrated in vacuo. The crude was purified by pre-HPLC (0.03% NH3·H2O in water / ACN) to give title product (12.28 mg, Y: 30%) as a white solid. ESI-MS (M+H)+: 409.2. 1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.61 (d, J = 1.2 Hz, 1H), 6.94 (s, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.03 – 3.92 (m, 5H), 3.24 – 3.17 (m, 4H), 3.10 (t, J = 8.5 Hz, 2H), 2.85 – 2.76 (m, 4H), 2.54 (s, 3H). Example 17 – Preparation of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 17)
Figure imgf000207_0001
Step 3
Figure imgf000208_0001
Step 1: Preparation of 6-bromo-2,4-dimethylbenzo[d]oxazole [0303] To a mixture of N-(4-bromo-2-methylphenyl)acetamide (10 g, 44.05 mmol) in AcOH (160 mL) and DMF (20 mL) were added TfOH (6.6 g, 44.05 mmol), K2S2O8 (17.8 g, 66.08 mmol) and Pd(OAc)2 (987 mg, 4.41 mmol), the mixture was charged with N2 for three times and stirred at 100 ℃ for 16 h under N2. The mixture was concentrated in vacuo, the residue was purified by silica gel column chromatography eluted with (EA/PE=1:1) to give the title compound (3 g, 30 %) as a yellow solid. ESI-MS (M+H) +:226.1. Step 2: Preparation of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine [0304] To a mixture of 6-bromo-2,4-dimethylbenzo[d]oxazole (2 g, 8.85 mmol) and diphenylmethanimine (2.4 g, 13.27 mmol) in 1,4-dioxane (50 mL) were added BINAP (1.10 g, 1.77 mmol), Pd(OAc)2 (199 mg, 0.88 mmol) and Cs2CO3 (8.6 g, 26.55 mmol). The reaction solution was stirred at 100℃ for 16 h. The reaction was diluted with H2O (100 mL), extracted with EA (100 mLx3), the organic layer was washed with brine (100 mL), dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA=7 %) to give title product (2 g, yield: 69.32%) as a yellow solid. ESI-MS (M+H) +: 327.2. 1H NMR (400 MHz, DMSO-d6) δ 7.68 – 7.64 (m, 2H), 7.55 – 7.51 (m, 1H), 7.50 – 7.44 (m, 2H), 7.34 – 7.29 (m, 3H), 7.19 – 7.15 (m, 2H), 6.72 (d, J = 1.3 Hz, 1H), 6.57 – 6.55 (m, 1H), 2.50 (s, 3H), 2.33 (s, 3H). Step 3: Preparation of 2,4-dimethylbenzo[d]oxazol-6-amine [0305] A mixture of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine (1.9 g, 5.83 mmol) in 3M HCl / EA (10 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was diluted with water (5 mL), adjusted pH to 7~8 by sat. Na2CO3, extracted with EA (20 mL×3). The organic layer was washed with brine (30 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 40 %) to give title product (1 g, yield: 98.8 %) as a white solid. ESI-MS (M+H) +: 163.1. 1H NMR (400 MHz, DMSO-d6) δ 6.52 (d, J = 1.6 Hz, 1H), 6.37 (dd, J = 1.8, 0.8 Hz, 1H), 5.11 (s, 2H), 2.47 (s, 3H), 2.32 (s, 3H). Step 4: Preparation of tert-butyl 4-(1-((2,4-dimethylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0306] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.49 mmol) and 2,4-dimethylbenzo[d]oxazol-6-amine (240 mg, 1.48 mmol) in THF (2 mL) were added TEA (247.4 mg, 2.45 mmol) and triphosgene (439.5 mg, 1.48 mmol) at 0 oC. The reaction mixture was stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (100 mg, 41%) as a yellow solid. ESI-MS (M+H) +: 493.3. Step 5: Preparation of N-(2,4-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0307] A mixture of tert-butyl 4-(1-((2,4-dimethylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.20 mmol) in 4 M HCl / EA (5 mL) was stirred at RT for 15 min. The precipitate was filtered and purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (1.89 mg, yield: 2.4 %) as a white solid. ESI-MS (M+H) +: 393.2. 1H NMR (400 MHz, MeOD-d4) δ 7.94 (d, J = 6.0 Hz, 1H), 7.86 (s, 1H), 7.05 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.05 (t, J = 8.6 Hz, 2H), 3.28 – 3.25 (m, 4H), 3.12 (t, J = 8.5 Hz, 2H), 2.97 – 2.92 (m, 4H), 2.60 (s, 3H), 2.51 (s, 3H). Example 18 – Preparation of N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 18) (Ac)2 O HOAc, RT, 3 h Step 1
Figure imgf000209_0001
Step 2 c)2 F
Figure imgf000209_0002
3M HCl/EA dioxane, 100 o C, 16 h
Figure imgf000209_0003
RT, 2 h Step 3 Step 4
Figure imgf000209_0004
Figure imgf000210_0001
Step 1: Preparation of N-(4-bromo-2,6-difluorophenyl)acetamide [0308] To a solution of 4-bromo-2,6-difluoroaniline (25 g, 0.12 mol) in HOAc (250 mL) was added (Ac)2O (74 mL, 0.78 mol). The mixture was stirred at RT for 3 h. The reaction mixture was poured into ice water, the precipitate was filtered, washed with ice water and dried in vacuo to give title product (29 g, yield: 96.67%) as a white solid. ESI-MS (M+H)+: 251.9. 1H NMR (400 MHz, DMSO-d6) δ 9.73 (s, 1H), 7.56 – 7.51 (m, 2H), 2.06 (s, 3H). Step 2: Preparation of 6-bromo-4-fluoro-2-methylbenzo[d]oxazole [0309] To a solution of N-(4-bromo-2,6-difluorophenyl)acetamide (29 g, 0.12 mol) in 1- methylpyrrolidin-2-one (300 mL) was added Cs2CO3 (97.8 g, 0.36 mol). The mixture was stirred at 150 oC for 2 h. The mixture was diluted with water (300 mL) and extracted with EA (300 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (5.4 g, yield: 19.49%) as a yellow solid. ESI-MS (M+H) +: 231.9. 1H NMR (400 MHz, DMSO-d6) δ 7.92 (d, J = 1.2 Hz, 1H), 7.55 (dd, J = 9.7, 1.6 Hz, 1H), 2.63 (s, 3H). Step 3: Preparation of N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine [0310] A mixture of 6-bromo-4-fluoro-2-methylbenzo[d]oxazole (5.3 g, 23.1 mmol), diphenylmethanimine (5.82 mL, 34.7 mmol), Cs2CO3 (22.5 g, 69.3 mmol), Pd(OAc)2 (520 mg, 2.31 mmol) and BINAP (2.88 g, 4.62 mmol) in 1,4-dioxane (80 mL) was stirred at 100 oC for 16 h. The mixture was diluted with water (300 mL) and extracted with EA (300 mL × 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude product was purified by column chromatography on silica gel (eluted with EA: PE = 1:1) to give title product (5 g, yield: 65.79%) as a white solid. ESI-MS (M+H)+: 331.1. 1H NMR (400 MHz, DMSO-d6) δ 7.70 – 7.65 (m, 2H), 7.55 – 7.54 (m, 1H), 7.48 (t, J = 7.4 Hz, 2H), 7.35 – 7.30 (m, 3H), 7.23 – 7.18 (m, 2H), 6.87 (d, J = 1.6 Hz, 1H), 6.64 (dd, J = 11.3, 1.6 Hz, 1H), 2.54 (s, 3H). Step 4: Preparation of 4-fluoro-2-methylbenzo[d]oxazol-6-amine HCl salt [0311] To a mixture of N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-1,1-diphenylmethanimine (2 g, 6.06 mmol) in MeOH (20 mL) was added 3.0 M HCl / EA (4 mL). The mixture was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (1 g, yield: 99.41%) as a white solid. ESI-MS (M+H)+: 167.1. 1H NMR (400 MHz, DMSO-d6) δ 6.54 (d, J = 1.7 Hz, 1H), 6.37 (dd, J = 12.6, 1.7 Hz, 1H), 5.51 (s, 2H), 2.49 (s, 3H). Step 5: Preparation of tert-butyl 4-(1-((4-fluoro-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate [0312] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 4-fluoro-2-methylbenzo[d]oxazol-6-amine (110 mg, 0.66 mmol) in THF (10 mL) were added triethylamine (0.25 mL, 1.65 mmol) and triphosgene (200 mg, 0.66 mmol) at 0 oC. The mixture was stirred at RT for 16 h. The precipitate was filtered, washed with THF (5 mL) and dried in vacuo to give title product (70 mg, yield: 42.94%) as a white solid. ESI-MS (M+H)+: 497.2. Step 6: Preparation of N-(4-fluoro-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0313] A mixture of tert-butyl 4-(1-((4-fluoro-2-methylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in 3.0 M HCl / EA (3 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% NH3·H2O in H2O / ACN) to give title product (15.70 mg, yield: 39.65%) as a white solid. ESI-MS (M+H)+: 397.2. 1H NMR (400 MHz, DMSO-d6) δ 12.22 (s, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 1.6 Hz, 1H), 7.40 (dd, J = 12.2, 1.6 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 3.97 (t, J = 8.5 Hz, 2H), 3.26 – 3.17 (m, 4H), 3.11 (t, J = 8.5 Hz, 2H), 2.84 – 2.78 (m, 4H), 2.60 (s, 3H).
Example 19 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(pyrrolidin-3-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride (Compound 19)
Figure imgf000212_0001
Step 1: Preparation of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,5-dihydro- 1H-pyrrole-1-carboxylate [0314] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (2 g, 12.94 mmol), tert- butyl 3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-2,5-dihydro-1H-pyrrole-1-carboxylate (5.76 g, 19.41 mmol), K2CO3 (5.35 g, 38.82 mmol) and Pd(dppf)Cl2 (944.3 mg, 1.29 mmol) in 1,4-dioxane / H2O (30 mL / 6 mL) was stirred at 110 oC for 16 h. The mixture was cooled to RT, filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column (DCM : MeOH = 20 : 1) to provide title product (3.0 g, yield: 81%) as a yellow solid. ESI-MS (M+H)+: 288.3. 1H NMR (400 MHz, DMSO-d6) δ 7.68 (s, 1H), 7.58 – 7.46 (m, 1H), 6.40 (s, 1H), 6.27 (d, J = 10.1 Hz, 1H), 4.38 (s, 2H), 4.22 (s, 2H), 3.48 (t, J = 8.4 Hz, 2H), 3.10 (t, J = 8.4 Hz, 2H), 1.44 (s, 9H). Step 2: Preparation of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1- carboxylate tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1- carboxylate [0315] To a solution tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,5-dihydro- 1H-pyrrole-1-carboxylate (500 mg, 1.74 mmol) in THF (10 mL) was added Pd/C (250 mg, 50 % wt). The obtained solution was charged with H2 for three times and stirred at RT for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo to afford the title compound (450 mg, yield: 89%) as a brown solid. ESI-MS (M+H)+:290.2. Step 3: Preparation of tert-butyl 3-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1-carboxylate [0316] To a solution of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine- 1-carboxylate (400 mg, 1.38 mmol) and 7-fluoro-2-methyl-2H-indazol-5-amine (683 mg, 4.14 mmol) in THF (8 mL) were added TEA (697 mg, 6.90 mmol) and triphosgene (614 mg, 2.07 mmol) at 0 oC. Then the mixture was stirred at RT for 16 hours. The mixture was allowed to cool down to room temperature and concentrated. The residue was purified by silica gel column chromatography (DCM : MeOH = 40 : 1) to provide title product (200 mg, yield: 30%) as white solid. ESI-MS (M+H)+:481.2. Step 4: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(pyrrolidin-3-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride [0317] To a solution of tert-butyl 3-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidine-1-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4 M HCl / EA (3 mL) at 0 oC. Then the mixture was stirred at RT for 2 hours. The precipitate was filtered, washed with EA and lyophilized to give title product (18 mg, 30%) as a yellow solid. ESI-MS (M+H) +:381.2. 1H NMR (400 MHz, MeOD-d4) δ 8.32 (d, J = 2.6 Hz, 1H), 8.04 (d, J = 6.6 Hz, 1H), 7.77 (d, J = 1.5 Hz, 1H), 7.38 (d, J = 6.6 Hz, 1H), 7.33 (dd, J = 12.8, 1.5 Hz, 1H), 4.47 (t, J = 8.2 Hz, 2H), 4.24 (s, 3H), 3.87 – 3.70 (m, 2H), 3.68 – 3.62 (m, 1H), 3.54 – 3.37 (m, 4H), 2.62 – 2.51 (m, 1H), 2.25 – 2.13 (m, 1H). Example 20 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 20)
Figure imgf000213_0001
Step 1: Preparation of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate [0318] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (500 mg, 3.22 mmol) and tert-butyl 4,7-diazaspiro[2.5]octane-4-carboxylate (1.36 g, 6.45 mmol) in a sealed tube was stirred at 140 oC for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH : DCM = 15 %) to give title product (1 g, yield: 94%) as a yellow solid. ESI-MS (M+H)+: 331.2. 1H NMR (400 MHz, DMSO-d6) δ 7.50 (d, J = 6.4 Hz, 1H), 6.48 – 6.40 (m, 1H), 6.17 (d, J = 6.5 Hz, 1H), 3.54 – 3.52 (m, 3H), 3.26 – 3.22 (m, 3H), 3.07 (s, 2H), 3.03 – 3.00 (m, 2H), 1.41 (s, 9H), 0.94 – 0.91 (m, 2H), 0.85 – 0.80 (m, 2H). Step 2: Preparation of tert-butyl 7-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5] octane-4-carboxylate [0319] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol) and 7-fluoro-2-methyl-2H-indazol- 5-amine (199.95 mg, 1.21 mmol) in THF (20 mL) were added TEA (245 mg, 2.42 mmol) and triphosgene (359.2 mg, 1.21mmol) at 0 oC. The reaction mixture was stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (200 mg, 63.35 %) as a yellow solid. ESI-MS (M+H)+: 522.2. 1H NMR (400 MHz, DMSO-d6) δ 8.86 (s, 1H), 8.37 – 8.29 (m, 2H), 7.61 – 7.60 (m, 1H), 7.16 – 7.13 (m, 1H), 4.16 (s, 3H), 4.14 (m, 1H), 3.96 (t, J = 8.5 Hz, 1H), 3.59 – 3.52 (m, 2H), 3.45 (m, 1H), 3.32 – 3.26 (m, 3H), 3.12 – 3.06 (m, 2H), 1.42 (s, 9H), 0.96 – 0.91 (m, 2H), 0.87 – 0.82 (m, 2H). Step 3: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate [0320] A mixture of tert-butyl 7-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.38 mmol) in 3 M HCl / EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (7.12 mg, yield: 4.45 %) as a yellow solid. ESI-MS (M+H)+: 422.1. 1H NMR (400 MHz, DMSO-d6) δ 11.89 (s, 1H), 8.35 (d, J = 2.8 Hz, 1H), 8.28 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.71 (d, J = 1.6 Hz, 1H), 7.25 (dd, J = 13.3, 1.6 Hz, 1H), 6.49 (d, J = 6.2 Hz, 1H), 4.16 (s, 3H), 3.95 (t, J = 9.0 Hz, 2H), 3.26 – 3.22 (m, 2H), 3.10 (s, 2H), 3.09 – 3.04 (m, 2H), 2.88 – 2.84 (m, 2H), 0.54 – 0.46 (m, 4H). Example 21 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound
Figure imgf000215_0001
Figure imgf000215_0002
Step 1: Preparation of 6-bromo-8-fluoro-2-methylimidazo[1,2-a] pyridine [0321] A mixture of 5-bromo-3-fluoropyridin-2-amine (50 g, 263 mmol) and 1- bromopropan-2-one (89.5 g, 658 mmol) in EtOH (500 mL) was stirred at 90 oC for 16 h. The reaction was cooled to r.t, the precipitated solids were collected by filtration and washed with EtOH. The cake was dissolved in H2O and basified to pH 10 with Na2CO3, the precipitated solids were collected by filtration, washed with H2O and dried by vacuum to afford title product (40 g, Y: 67%) as a white solid. ESI-MS (M+H)+: 229.1. 1H NMR (400 MHz, DMSO-d6) δ 8.71 (d, J = 1.4 Hz, 1H), 7.82 – 7.73 (m, 1H), 7.38 (dd, J = 10.7, 1.5 Hz, 1H), 2.35 (d, J = 0.6 Hz, 3H). Step 2: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine [0322] A mixture of 6-bromo-8-fluoro-2-methylimidazo[1,2-a] pyridine (15 g, 65.8 mmol), diphenylmethanimine (12.5 g, 69.1 mmol), Pd(OAc)2 (1.48 g, 6.58 mmol), BINAP (8.2 g, 13.2 mmol) and Cs2CO3 (42.8 g, 131.6 mmol) in 1,4-dioxane (150 mL) was purged with N2 for three times at rt. Then the mixture was stirred at 115 oC for 16 h. The mixture was cooled to r.t and filtered and filter was concentrated under reduce pressure. The residue was purified by silica gel column (0~50% EA in PE) to provide title product (16 g, yield: 74%) as light brown solid. ESI-MS (M+H)+: 330.4. 1H NMR (400 MHz, DMSO-d6) δ 7.83 (d, J = 1.2 Hz, 1H), 7.68 (d, J = 7.3 Hz, 2H), 7.62 (d, J = 2.8 Hz, 1H), 7.56 (d, J = 7.2 Hz, 1H), 7.48 (t, J = 7.5 Hz, 2H), 7.43 – 7.35 (m, 3H), 7.24 – 7.21 (m, 2H), 6.65 – 6.63 (m, 1H), 2.27 (s, 3H). Step 3: Preparation of 8-fluoro-2-methylimidazo[1,2-a] pyridin-6-amine [0323] To a solution of N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-1,1- diphenylmethanimine (15 g, 45.6 mmol) in EA (100 mL) at 0 oC was added 3M HCl-EA (90 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered and dissolved in H2O and basified to pH 10 with Na2CO3, the precipitated solids were collected by filtration, washed with H2O and dried by vacuum to afford title product (7.2 g, yield: 96%) as yellow solid. ESI-MS (M+H)+: 166.1. 1H NMR (400 MHz, DMSO-d6) δ 8.04 (s, 1H), 7.85 (s, 1H), 7.38 (d, J = 12.3 Hz, 1H), 2.43 (s, 3H). Step 4: Preparation of 4-(4-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine [0324] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and 1-methylpiperazine (580 mg, 5.81 mmol) in DIEA (1.3 g, 9.70 mmol) was stirred at 140 ℃ for 16 h in sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH= 10: 1) to give title product (200 mg, Y: 47 %) as a yellow solid. ESI-MS (M+H) +:219.1. 1H NMR (400 MHz, DMSO-d6) δ 7.52 (d, J = 5.9 Hz, 1H), 6.06 (d, J = 6.0 Hz, 1H), 5.86 (s, 1H), 3.47 – 3.36 (m, 2H), 3.14 – 3.08 (m, 4H), 2.93 (t, J = 8.4 Hz, 2H), 2.42 – 2.35 (m, 4H), 2.20 (s, 3H). Step 5: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0325] To a mixture of 4-(4-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (80 mg, 0.37 mmol) in THF (5 mL) were added 8-fluoro-2-methylimidazo[1,2-a]pyridin-6- amine (182 mg, 1.10 mmol), TEA (187 mg, 1.85 mmol) and triphosgene (220 mg, 0.74 mmol) at 0 ℃. The reaction mixture was stirred at RT for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (42.42 mg, yield: 27 %) as a white solid. ESI-MS (M+H)+:410.2. 1H NMR (400 MHz, DMSO-d6) δ 11.82 (s, 1H), 8.82 (d, J = 1.5 Hz, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.8 Hz, 1H), 7.23 (dd, J = 12.5, 1.5 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 3.97 (t, J = 8.6 Hz, 2H), 3.30 – 3.27 (m, 4H), 3.12 (t, J = 8.5 Hz, 2H), 2.46 – 2.39 (m, 4H), 2.32 (d, J = 5.1 Hz, 3H), 2.22 (s, 3H). Example 22 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (Compound 22)
Figure imgf000217_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate [0326] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and tert-butyl (2R,6S)-2,6-dimethylpiperazine-1-carboxylate (832 mg,3.88 mmol) was stirred at 140 oC for 16 h in a sealed tube. The mixture was purified by column chromatography on silica gel (eluted with DCM : MeOH = 10 : 1) to give title product (200 mg, yield: 31.06%) as a white solid. ESI-MS (M+H) +: 333.2. 1H NMR (400 MHz, DMSO-d6) δ 7.56 (d, J = 5.9 Hz, 1H), 6.08 (d, J = 6.0 Hz, 1H), 5.94(s, 1H), 3.86 – 3.76 (m, 4H), 3.41 – 3.36 (m, 4H), 3.02 – 2.96 (m, 1H), 2.82 – 2.76 (m, 1H), 1.39 (s, 9H), 1.16 (s, 3H), 1.15 (s, 3H). Step 2: Preparation of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate [0327] To a solution of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (160 mg, 0.48 mmol) and 7-fluoro-2-methyl-2H-indazol-5- amine (158 mg, 0.96 mmol) in THF (15 mL) were added triethylamine (0.33 mL, 2.40 mmol) and triphosgene (285 mg, 0.96 mmol) at 0 oC. The mixture was stirred at RT for 16 h. The precipitate was filtered, washed with THF (5 mL) and dried in vacuo to give title product (60 mg, yield: 23.90%) as a white solid. ESI-MS (M+H) +: 524.4. Step 3: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide [0328] A mixture of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (40 mg, 0.08 mmol) in 3.0 M HCl / EA (3 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% NH3·H2O in H2O / ACN) to give title product (1.05 mg, yield: 3.10%) as a white solid. ESI-MS (M+H)+: 424.2.1H NMR (400 MHz, MeOD-d4) δ 8.19 (d, J = 2.6 Hz, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.70 (d, J = 1.5 Hz, 1H), 7.20 (dd, J = 12.9, 1.5 Hz, 1H), 6.59 (d, J = 6.1 Hz, 1H), 4.21 (s, 3H), 4.14 – 4.05 (m, 2H), 3.83 (d, J = 11.9 Hz, 2H), 3.42 – 3.36 (m, 2H), 3.20 – 3.12 (m, 2H), 2.80 (dd, J = 13.1, 11.4 Hz, 2H), 1.34 (d, J = 6.5 Hz, 6H). Example 23 – Preparation of N-(6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) -4-(piperazin- 1-yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
Figure imgf000218_0001
Compound 23 Step 1: Preparation of tert-butyl 4-(1-((6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [0329] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (100 mg, 0.33 mmol) and 6,8-dimethylimidazo[1,2-a] pyrazin-2-amine (159 mg, 0.97 mmol) in THF (3 mL) were added TEA (98 mg, 0.97 mmol) and triphosgene (288 mg, 0.97 mmol) at 0oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column (PE / EA=1:3) to give title product (120 mg, 74%) as a yellow oil. ESI-MS (M+H)+: 493.3.1H NMR (400 MHz, DMSO-d6) δ 11.59 (s, 1H), 7.94 (d, J = 6.1 Hz, 1H), 7.77 (s, 1H), 6.94 (s, 1H), 6.57 (d, J = 6.2 Hz, 1H), 3.48 – 3.43 (m, 4H), 3.18 – 3.16 (m, 6H), 2.71 – 2.70 (m, 2H), 2.40 (s, 3H), 2.33 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) -4-(piperazin-1-yl) -2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. [0330] To a mixture of tert-butyl 4-(1-((6,8-dimethylimidazo[1,2-a] pyrazin-2-yl) carbamoyl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (100 mg, 0.21 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (14.42 mg, yield: 17 %) as a white solid. ESI-MS (M+H)+: 393.3.1H NMR (400 MHz, DMSO-d6) δ 11.60 (s, 1H), 8.26 (s, 1H), 7.94 (d, J = 6.1 Hz, 1H), 7.83 (s, 1H), 7.62 (s, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.01 (t, J = 8.3 Hz, 2H), 3.36 – 3.28 (m, 4H), 3.15 (t, J = 8.4 Hz, 2H), 3.01 – 2.88 (m, 4H), 2.70 (s, 3H), 2.39 (s, 3H). Example 24 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000219_0001
Step 1: Preparation of 4-(4-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [0331] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and 1-methylpiperazine (580 mg, 5.81 mmol) in DIEA (1.3 g, 9.70 mmol) was stirred at 140 ℃ for 16 h in sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH= 10: 1) to give title product (200 mg, Y: 47 %) as a yellow solid. ESI-MS (M+H) +:219.1.1H NMR (400 MHz, DMSO-d6) δ 7.52 (d, J = 5.9 Hz, 1H), 6.06 (d, J = 6.0 Hz, 1H), 5.86 (s, 1H), 3.47 – 3.36 (m, 2H), 3.14 – 3.08 (m, 4H), 2.93 (t, J = 8.4 Hz, 2H), 2.42 – 2.35 (m, 4H), 2.20 (s, 3H). Step 2: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(4-methylpiperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0332] To a mixture of 7-fluoro-2-methyl-2H-indazol-5-amine (182 mg, 1.10 mmol) in THF (5 mL) were added 4-(4-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (80 mg, 0.37 mmol), TEA (187 mg, 1.85 mmol) and triphosgene (220 mg, 0.74 mmol) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (20.11 mg, yield: 13 %) as a white solid. ESI-MS (M+H) +:410.1.1H NMR (400 MHz, DMSO-d6) δ 11.86 (s, 1H), 8.35 (d, J = 2.8 Hz, 1H), 8.18 (s, 1H), 7.92 (d, J = 6.1 Hz, 1H), 7.71 (d, J = 1.6 Hz, 1H), 7.26 (dd, J = 13.3, 1.6 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.16 (s, 3H), 3.99 – 3.94 (m, 2H), 3.31 – 3.27 (m, 4H), 3.11 (t, J = 8.5 Hz, 2H), 2.45 – 2.39 (m, 4H), 2.22 (s, 3H).
Example 25 – Preparation of N-(5,7-dimethylimidazo[1,2-c]pyrimidin-2-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000221_0001
Step 1: Preparation of ethyl 5,7-dimethylimidazo[1,2-c]pyrimidine-2-carboxylate. [0333] To a solution of 2,6-dimethylpyrimidin-4-amine (10 g, 81.30 mmol) in EtOH (100 mL) was added ethyl 3-bromo-2-oxopropanoate (24 g, 121.95 mmol). The reaction mixture was stirred at 80 oC for 16 h. The mixture was concentrated in vacuo and diluted with aq. NaHCO3 (50 mL), extracted with DCM (100 mL×2), the organic was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by column gel chromatography (PE/EA=1/1) to give title product (2 g, 11.24 %) as a yellow solid. ESI-MS (M+H) +: 220.2. Step 2: Preparation of 5,7-dimethylimidazo[1,2-c]pyrimidine-2-carboxylic acid. [0334] To a solution of ethyl 5,7-dimethylimidazo[1,2-c]pyrimidine-2-carboxylate (2 g, 9.13 mmol) in EtOH (20 mL) was added 2 M NaOH (20 mL) at 0 °C. The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and diluted with H2O (30 mL), extracted with EA (20 mL×2). The aqueous phase was adjust to PH =2~3, the precipitate was filtered to give title product (1.6 g, 91.95 %) as a yellow solid. ESI-MS (M+H) +: 192.2. Step 3: Preparation of tert-butyl (5,7-dimethylimidazo[1,2-c]pyrimidin-2-yl)carbamate. [0335] To a solution of 5,7-dimethylimidazo[1,2-c]pyrimidine-2-carboxylic acid (1 g, 5.24 mmol) in DCM (20 mL) were added TEA (1.6 g, 15.72 mmol) and DPPA (1.6 g, 5.76 mmol). The mixture was stirred at RT for 1 h. The mixture was concentrated in vacuo, the residue was diluted with t-BuOH (20 mL) and stirred at 85 oC for 16 h. The mixture was concentrated in vacuo and the residue was purified by column gel chromatography (PE/EA=1/1) to give title product (200 mg, 14.60 %) as a yellow solid. ESI-MS (M+H) +: 263.1.1H NMR (400 MHz, CDCl3) δ 8.34 – 8.16 (m, 1H), 7.55 (s, 1H), 7.04 (s, 1H), 2.68 (s, 3H), 2.42 (s, 3H), 1.49 (s, 9H). Step 4: Preparation of 5,7-dimethylimidazo[1,2-c]pyrimidin-2-amine. [0336] To a solution of tert-butyl (5,7-dimethylimidazo[1,2-c]pyrimidin-2-yl)carbamate (200 mg, 0.76 mmol) in EA (2 mL) was added 4 M HCl / EA (2 mL). The mixture was stirred at RT for 2 h. The precipitate was filtered, washed with EA (5 mL) and concentrated in vacuo. The crude was diluted with aq. Na2CO3, the precipitate was filtered to give title product (100 mg, 81.30 %) as a yellow solid. ESI-MS (M+H) +: 163.3.1H NMR (400 MHz, DMSO-d6) δ 6.91 (s, 1H), 6.66 (s, 1H), 5.25 (s, 2H), 2.58 (s, 3H), 2.34 (s, 3H). Step 5: Preparation of tert-butyl 4-(1-((5,7-dimethylimidazo[1,2-c]pyrimidin-2- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0337] To a solution of 5,7-dimethylimidazo[1,2-c]pyrimidin-2-amine (80 mg, 0.31 mmol) and tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (94 mg, 0.31 mmol) in THF (5 mL) were added TEA (94 mg, 0.93 mmol) and triphosgene (92 mg, 0.31 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was purified by column gel chromatography (PE/EA=0/1) to give title product (100 mg, 66.45 %) as a yellow solid. ESI-MS (M+H) +: 493.2. Step 6: Preparation of N-(5,7-dimethylimidazo[1,2-c]pyrimidin-2-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0338] To a solution of tert-butyl 4-(1-((5,7-dimethylimidazo[1,2-c]pyrimidin-2- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.20 mmol) in EA (2 mL) was added 4 M HCl / EA (3 mL). The mixture was stirred at RT for 2 h. The precipitate was filtered, washed with EA (5 mL) and lyophilized to give title product (74 mg, 85.06 %) as a yellow solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6) δ 9.44 (s, 2H), 8.01 – 7.92 (m, 1H), 7.80 (s, 1H), 7.30 (s, 1H), 6.85 – 6.58 (m, 1H), 4.20 – 4.01 (m, 2H), 3.72 – 3.43 (m, 4H), 3.28 – 3.16 (m, 6H), 2.80 (s, 3H), 2.46 (s, 3H). Example 26 – Preparation of N-(4,6-dimethylpyrazolo[1,5-a]pyrazin-2-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000223_0001
Compound 26 Step 1: Preparation of tert-butyl 4-(1-((4,6-dimethylpyrazolo[1,5-a]pyrazin-2-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0339] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) in THF (5 mL) were added 4,6-dimethylpyrazolo[1,5- a]pyrazin-2-amine (107 mg, 0.66 mmol), TEA (196 mg, 1.65 mmol) and triphosgene (196 mg, 0.66 mmol) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: EA=1:1) to give title product (80 mg, yield: 49 %) as a yellow solid. ESI-MS (M+H) +:493.3.1H NMR (400 MHz, DMSO-d6) δ 12.32 (s, 1H), 8.31 (s, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.98 (s, 1H), 6.56 (d, J = 6.2 Hz, 1H), 4.02 (t, J = 8.6 Hz, 2H), 3.47 – 3.42 (m, 4H), 3.30 – 3.27 (m, 4H), 3.15 (t, J = 8.5 Hz, 2H), 2.62 (s, 3H), 2.38 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(4,6-dimethylpyrazolo[1,5-a]pyrazin-2-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0340] To a mixture of tert-butyl 4-(1-((4,6-dimethylpyrazolo[1,5-a]pyrazin-2- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.14 mmol) in EA (5 mL) was added 4M HCl / EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and lyophilized to give title compound (31.71 mg, 52 %) as a white solid. ESI-MS (M+H)+:393.1.1H NMR (400 MHz, DMSO-d6) δ 12.32 (s, 1H), 9.06 (s, 2H), 8.41 (s, 1H), 8.00 (s, 1H), 7.08 (s, 1H), 6.65 (s, 1H), 4.11 – 4.08 (m, 2H), 3.56 – 3.48 (m, 4H), 3.24 – 3.16 (m, 6H), 2.68 (s, 3H), 2.41 (s, 3H). Example 27 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1- methylpyrrolidin-3-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000224_0001
Compound 27 Step 1: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1-methylpyrrolidin-3-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0341] To a solution of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(pyrrolidin-3-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (60 mg, 0.16 mmol) in MeOH / THF (2 mL / 2 mL) were added (HCHO)n (14 mg, 0.48 mmol) and AcOH (48 mg, 0.80 mmol). The mixture was stirred at r.t for 1h. Then NaBH3CN (30 mg, 0.80 mmol) was added to the mixture and stirred at 50 oC for 16 h. The mixture was concentrated in vacuo, the residue was purified by silica gel column (DCM: MeOH = 20:1) to provide title product (20 mg, yield: 32%) as a white solid. ESI-MS (M+H)+:395.1.1H NMR (400 MHz, DMSO-d6) δ 11.57 (s, 1H), 8.37 (d, J = 2.8 Hz, 1H), 8.09 (d, J = 5.5 Hz, 1H), 7.74 (d, J = 1.5 Hz, 1H), 7.28 (dd, J = 13.3, 1.5 Hz, 1H), 6.98 (d, J = 5.6 Hz, 1H), 4.17 (s, 3H), 4.04 (t, J = 8.6 Hz, 2H), 3.10 (t, J = 8.6 Hz, 2H), 2.80 – 2.67 (m, 2H), 2.59 – 2.52 (m, 3H), 2.32 (s, 3H), 2.30 – 2.25 (m, 1H), 1.75 (dd, J = 13.2, 7.4 Hz, 1H). Example 28 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000224_0002
Step 1: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(1-methylpiperidin-4-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0342] A mixture of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperidin-4-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide (100 mg, 0.25 mmol), (CH2O)n (68 mg, 0.76 mmol), TEA (76 mg, 0.76 mmol) and NaBHCN (45.6 mg, 0.76 mmol) in MeOH (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (35.59 mg, yield: 34.89%) as a pink solid. ESI-MS (M+H) +: 409.1.1H NMR (400 MHz, DMSO-d6) δ 11.56 (s, 1H), 8.37 (d, J = 2.7 Hz, 1H), 8.21 (s, 1H), 8.10 (d, J = 5.5 Hz, 1H), 7.73 (d, J = 1.3 Hz, 1H), 7.28 (dd, J = 13.3, 1.3 Hz, 1H), 6.90 (d, J = 5.6 Hz, 1H), 4.17 (s, 3H), 4.05 (t, J = 8.6 Hz, 2H), 3.11 (t, J = 8.5 Hz, 2H), 2.97 (d, J = 11.2 Hz, 2H), 2.61 – 2.52 (m, 1H), 2.29 (s, 3H), 2.17 – 2.11 (m, 2H), 1.75 – 1.68 (m, 4H). Example 29 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperidin-4-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000225_0001
Step 1: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,6- dihydropyridine-1(2H)-carboxylate. [0343] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (2 g, 12.94 mmol), tert- butyl 4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-3,6-dihydropyridine-1(2H)-carboxylate (7.9 g, 25.87 mmol), Pd(dppf)Cl2 (948 mg, 1.29 mmol) and K2CO3 (5.35 mg,38.32 mmol) in 1,4-dioxane / H2O (20 mL / 5 mL) was stirred at 100 oC for 16 h under N2. The mixture was diluted with water (30 mL), extracted with EA (30 mL×3). The organic layer was washed with brine (30 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 71 %) to give title product (1.7 g, yield: 43.64 %) as a yellow solid. ESI-MS (M+H) +: 302.2.1H NMR (400 MHz, DMSO-d6) δ 7.65 (d, J = 5.5 Hz, 1H), 6.36 (d, J = 5.6 Hz, 1H), 5.76 (br.s, 1H), 4.00 – 3.95 (m, 2H), 3.50 (t, J = 5.5 Hz, 2H), 3.41 (t, J = 8.4 Hz, 2H), 3.03 (t, J = 8.3 Hz, 2H), 2.37 (d, J = 1.5 Hz, 2H), 2.37 (d, J = 1.5 Hz, 2H), 1.43 (s, 9H). Step 2: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1- carboxylate. [0344] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,6- dihydropyridine-1(2H)-carboxylate (1.1 g, 3.32 mmol), Pd(OH)2 (250 mg) and Pd/C (250 mg) in THF (50 mL) was stirred at RT for 2 h under H2. The precipitate was filtered and the filtrate was dried in vacuo to give title product (1 g, yield: 99.41 %) as a white solid. ESI-MS (M+H) +: 304.1.1H NMR (400 MHz, DMSO- d6) δ 7.62 (d, J = 5.5 Hz, 1H), 6.30 (d, J = 5.5 Hz, 1H), 6.21 (s, 1H), 4.05 (d, J = 11.3 Hz, 2H), 3.43 (t, J = 8.1 Hz, 2H), 2.96 (t, J = 8.4 Hz, 2H), 2.84 – 2.70 (m, 2H), 2.63 – 2.57 (m, 1H), 1.68 – 1.61 (m, 2H), 1.46 – 1.38 (m, 11H). Step 3: Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate. [0345] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1- carboxylate (437,6 mg, 1.44 mmol), phenyl (7-fluoro-2-methyl-2H-indazol-5-yl)carbamate (343 mg 1.20 mmol) and DMAP (14.6 mg, 0.12 mmol) in THF (10 mL) was stirred at 80 oC for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE= 100%) to give title product (400 mg, yield: 60.52 %) as a white solid. ESI-MS (M+H) +: 495.2.1H NMR (400 MHz, DMSO- d6) δ 11.55 (s, 1H), 8.37 (s, 1H), 8.10 (d, J = 4.5 Hz, 1H), 7.74 (s, 1H), 7.28 (d, J = 13.1 Hz, 1H), 6.92 (d, J = 5.1 Hz, 1H), 4.17 (s, 3H), 4.08 – 4.03 (m, 3H), 3.15 – 3.11 (m, 2H), 2.84 – 2.76 (m, 4H), 1.74 – 1.69 (m, 2H), 1.56 – 1.50 (m, 2H), 1.43 (s, 9H). Step 4: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperidin-4-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0346] A mixture of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate (350 mg, 0.71 mmol) in 3M HCl / EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered to give title product (200 mg, yield: 71.31 %) as a pink solid. ESI-MS (M+H) +: 395.2.1H NMR (400 MHz, DMSO-d6) δ 11.45 (s, 1H), 9.02 (s, 2H), 8.38 (d, J = 2.8 Hz, 1H), 8.15 (d, J = 5.6 Hz, 1H), 7.74 (d, J = 1.5 Hz, 1H), 7.29 (dd, J = 13.3, 1.5 Hz, 1H), 6.85 (d, J = 5.6 Hz, 1H), 4.17 (s, 3H), 4.11 – 4.10 (m, 2H), 3.41 – 3.35 (m, 2H), 3.19 – 3.13 (m, 2H), 3.06 – 2.93 (m, 3H), 1.96 – 1.85 (m, 4H). Example 30 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- (methylamino)azetidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000227_0001
[0347] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and tert-butyl azetidin-3-yl(methyl)carbamate (541 mg, 2.91 mmol) was added DIEA (2 mL). The reaction mixture was stirred at 120 °C for 16 h in a sealed tube. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=1/2) to give title product (200 mg, 34.01 %) as a yellow solid. ESI-MS (M+H) +: 305.1. Step 2: Preparation of tert-butyl (1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)(methyl)carbamate. [0348] To a solution of tert-butyl (1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3- yl)(methyl)carbamate (200 mg, 0.66 mmol) and 7-fluoro-2-methyl-2H-indazol-5-amine (109 mg, 0.66 mmol) in THF (5 mL) were added TEA (200 mg, 1.98 mmol) and triphosgene (196 mg, 0.66 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column chromatography (PE/EA=0/1) to give title product (50 mg, 15.34 %) as a yellow solid. ESI-MS (M+H) +: 496.4. Step 3: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-(methylamino)azetidin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0349] To a solution of tert-butyl (1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)(methyl)carbamate (50 mg, 0.10 mmol) in EA (2 mL) was added 4 M HCl / EA (0.5 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (2 mg, 4.49 %) as a yellow solid. ESI-MS (M+H) +: 396.2.1H NMR (400 MHz, MeOD-d4) δ 8.42 (s, 1H), 8.18 (d, J = 2.4 Hz, 1H), 7.85 (d, J = 5.9 Hz, 1H), 7.68 (s, 1H), 7.18 (d, J = 13.6 Hz, 1H), 6.07 (d, J = 5.9 Hz, 1H), 4.39 (t, J = 7.9 Hz, 2H), 4.20 (s, 3H), 4.08 – 3.99 (m, 4H), 3.95 – 3.87 (m, 1H), 3.14 (t, J = 8.6 Hz, 2H), 2.57 (s, 3H). Example 31 – Preparation of 4-(piperazin-1-yl)-N-(quinolin-4-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000228_0001
Compound 31 Step 1: Preparation of tert-butyl 4-(1-(quinolin-4-ylcarbamoyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate. [0350] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and quinolin-4-amine (48 mg, 0.33 mmol) in THF (5 mL) were added TEA (100 mg, 0.99 mmol) and triphosgene (98 mg, 0.33 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column chromatography (PE/EA=1/2) to give title product (50 mg, 32.05 %) as a yellow solid. ESI-MS (M+H) +: 475.4.1H NMR (400 MHz, DMSO-d6) δ 8.76 (d, J = 5.1 Hz, 1H), 8.34 (d, J = 5.2 Hz, 1H), 8.30 (d, J = 8.0 Hz, 1H), 8.16 (d, J = 6.1 Hz, 1H), 8.05 – 7.99 (m, 1H), 7.83 – 7.72 (m, 2H), 6.64 (d, J = 6.2 Hz, 1H), 4.09 – 4.04 (m, 2H), 3.49 – 3.44 (m, 4H), 3.37 – 3.35 (m, 4H), 3.20 – 3.19 (m, 2H), 1.43 (s, 9H). Step 2: Preparation of 4-(piperazin-1-yl)-N-(quinolin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxamide formate. [0351] To a solution of tert-butyl 4-(1-(quinolin-4-ylcarbamoyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.11 mmol) in EA (2 mL) was added 4 M HCl / EA (0.5 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (27 mg, 60.95 %) as a yellow solid. ESI-MS (M+H) +: 375.2.1H NMR (400 MHz, DMSO-d6) δ 13.06 (s, 1H), 8.76 (d, J = 5.1 Hz, 1H), 8.33 (d, J = 5.1 Hz, 1H), 8.30 (d, J = 8.1 Hz, 1H), 8.21 (s, 1H), 8.14 (d, J = 6.1 Hz, 1H), 8.04 – 7.97 (m, 1H), 7.84 – 7.71 (m, 2H), 6.62 (d, J = 6.2 Hz, 1H), 4.06 (t, J = 8.5 Hz, 2H), 3.33 – 3.29 (m, 4H), 3.20 – 3.15 (m, 2H), 2.92 – 2.84 (m, 4H). Example 32 – Preparation of N-(1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
Figure imgf000229_0001
Compound 32 Step 1: Preparation of tert-butyl 4-(1-((1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [0352] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (100 mg, 0.33 mmol) and 1-methyl-1H-pyrrolo[2,3-b] pyridin-4-amine (60 mg, 0.39 mmol) in THF (2 mL) were added TEA (99 mg, 0.99 mmol) and triphosgene (116 mg, 0.39 mmol) at 0oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 2: 1) to give title product (120 mg, 70%) as a yellow solid. ESI-MS (M+H) +: 478.3. Step 2: Preparation of N-(1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. [0353] To a mixture of tert-butyl 4-(1-((1-methyl-1H-pyrrolo[2,3-b] pyridin-4-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (100 mg, 0.21 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by Prep-HPLC (0.1 % FA in water / CH3CN) to give title product (12.75 mg, yield: 16 %) as a yellow solid. ESI-MS (M+H) +: 378.2.1H NMR (400 MHz, DMSO-d6) δ 12.56 (s, 1H), 8.31 (s, 1H), 8.18 – 8.06 (m, 2H), 7.86 (d, J = 4.5 Hz, 1H), 7.45 (s, 1H), 6.58 (s, 2H), 4.03 – 4.00 (m, 2H), 3.81 (s, 3H), 3.39 – 3.27 (m, 4H), 3.18 – 3.08 (m, 2H), 3.06 – 2.84 (m, 4H). Example 33 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000230_0001
Step 1: Preparation of tert-butyl 7-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5] octane-4- carboxylate. [0354] To a solution of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) and 8-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (99 mg, 0.60 mmol) in THF (10 mL) were added TEA (153 mg, 1.51 mmol) and triphosgene (179 mg, 0.60 mmol) at 0oC. The mixture was stirred at r.t for 3 h. The mixture was concentrated and purified by silica gel column chromatography (PE: EA= 1: 3) to give the compound (110 mg, 36.90%) as a yellow solid. ESI-MS (M+H) +: 522.3.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 8.82 (d, J = 1.6 Hz, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.6 Hz, 1H), 7.24 (d, J = 12.6 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 3.99 – 3.94 (m, 2H), 3.59 – 3.54 (m, 4H), 3.18 – 3.16 (m, 2H), 3.11 – 3.07 (m, 2H), 2.32 (s, 3H), 1.42 (s, 9H), 0.96 – 0.92 (m, 2H), 0.86 – 0.83 (m, 2H). Step 2: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0355] To a mixture of tert-butyl 3-((1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)oxy)pyrrolidine-1-carboxylate (100 mg, 0.19 mmol) in EA (3 mL) was added 3M HCl / EA (1 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (43 mg, Y: 53.21%) as a white solid. ESI-MS (M+H) +: 422.2.1H NMR (400 MHz, DMSO-d6) δ 11.85 (s, 1H), 8.82 (s, 1H), 8.19 (s, 1H), 7.89 (d, J = 5.6 Hz, 1H), 7.83 (s, 1H), 7.23 (d, J = 12.3 Hz, 1H), 6.51 (d, J = 5.8 Hz, 1H), 4.00 – 3.93 (m, 2H), 3.28 – 3.22 (m, 2H), 3.15 – 3.04 (m, 4H), 2.92 – 2.84 (m, 2H), 2.33 (s, 3H), 0.51 (d, J = 8.4 Hz, 4H). Example 34 – Preparation of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000231_0001
Step 1: Preparation of 5-bromo-6-(cyclopropylmethoxy)-2-methyl-2H-indazole. [0356] To a mixture of 5-bromo-2-methyl-2H-indazol-6-ol (3.0 g, 13.22 mmol) and (bromomethyl)cyclopropane (2.14 g, 15.86 mmol) in DMF (30 mL) was added K2CO3 (5.47 g, 39.66 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with water (30 mL). The precipitate was filtered, washed with water and dried in vacuo to give title product (3.5 g, 80.76 %) as a yellow solid. ESI-MS (M+H)+: 283.1. Step 2: Preparation of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine. [0357] A mixture of 5-bromo-6-(cyclopropylmethoxy)-2-methyl-2H-indazole (3.5 g, 12.46 mmol), diphenylmethanimine (5.64 g, 31.15 mmol) and Cs2CO3 (8.12 g, 24.92 mmol) in 1,4- dioxane (40 mL) were added Pd(OAc)2 (285.04 mg, 1.25 mmol) and BINAP (1.55 g, 2.49 mmol). The mixture was stirred at 100 oC for 16 h under N2. The mixture was diluted with H2O (40 mL) and extracted with EA (40 mL x 3). The organic phase was washed with brine (40 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (1.4 g, 29.45%) as a brown solid. ESI-MS (M+H)+:382.2. Step 3: Preparation of 6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-amine hydrochloride. [0358] A mixture of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine (1.4 g, 3.67 mmol) in 3M HCl/EA (15 mL) was stirred at rt for 2 h. The precipitate was filtered, washed with EA and dried in vacuo to give title product (800 mg, 86.16 %) as a brown solid. ESI-MS (M+H)+: 218.3.1H NMR (400 MHz, DMSO-d6) δ 10.18 (s, 2H), 8.38 (s, 1H), 7.91 (s, 1H), 7.13 (s, 1H), 4.12 (s, 3H), 3.99 (d, J = 6.7 Hz, 2H), 1.38 – 1.26 (m, 1H), 0.66 – 0.56 (m, 2H), 0.51 – 0.39 (m, 2H). Step 4: Preparation of tert-butyl 4-(1-((6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0359] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.44 mmol), 6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-amine hydrochloride (111.32 mg, 0.44 mmol) in THF (10 mL) were added TEA (133.32 mg, 1.32 mmol) and triphosgene (156.82 mg, 0.53 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 33.23%) as a white solid. ESI-MS (M+H) +: 548.3.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 8.44 (s, 1H), 8.10 (s, 1H), 7.90 (d, J = 6.0 Hz, 1H), 6.93 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.05 (s, 3H), 4.03 – 3.98 (m, 2H), 3.96 – 3.91 (m, 2H), 3.47 – 3.43 (m, 4H), 3.28 – 3.08 (m, 6H), 1.43 (s, 9H), 1.24 – 1.11 (m, 1H), 0.71 – 0.60 (m, 2H), 0.43 – 0.39 (m, 2H). Step 5: Preparation of N-(6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0360] To a mixture of tert-butyl 4-(1-((6-(cyclopropylmethoxy)-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.15 mmol) in 3M HCl/EA (5 mL) was stirred at r.t for 2 h. The precipitate was filtered, washed with EA and dried in vacuo to give title product (54 mg, 74.38 %) as a white solid. ESI-MS (M+H)+: 448.3.1H NMR (400 MHz, DMSO-d6) δ 9.38 (s, 2H), 8.42 (s, 1H), 8.21 (s, 1H), 7.92 (d, J = 5.9 Hz, 1H), 6.97 (s, 1H), 6.61 (d, J = 5.2 Hz, 1H), 4.08 (s, 3H), 4.07 – 4.01 (m, 2H), 3.97 (d, J = 6.8 Hz, 2H), 3.58 – 3.48 (m, 4H), 3.22 – 3.14 (m, 6H), 1.43 – 1.34 (m, 1H), 0.66 – 0.61 (m, 2H), 0.45 – 0.40 (m, 2H). Example 35 – Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000233_0001
Step 1: Preparation of 6-fluoro-2-methyl-5-nitro-2H-indazole. [0361] To a solution of 6-fluoro-5-nitro-1H-indazole (1.69 g, 9.34 mmol) in EA (50 mL) were added trimethyloxonium tetrafluoroborate (2.07 g, 14.01 mmol) at 0℃, The mixture was stirred at r.t for 5 h. The mixture was diluted with sat. NaHCO3 (20 mL), extracted with EA (30 mL). The organic layer was washed with brine, dried and concentrated to afford the title product (1.2 g, 65%) as a yellow solid. ESI-MS (M+CAN+H)+ 237.0.1H NMR (400 MHz, DMSO-d6) δ 8.83 (d, J = 7.6 Hz, 1H), 8.77 (s, 1H), 7.68 (d, J = 12.7 Hz, 1H), 4.23 (s, 3H). Step 2: Preparation of 6-fluoro-2-methyl-2H-indazol-5-amine. [0362] To a solution of 6-fluoro-2-methyl-5-nitro-2H-indazole (1.2 g, 6.15 mmol) in MeOH (30 mL) and DCM (30 mL) was added Pd / C (880 mg, 10% w.t). The mixture was charged with H2 for three times and stirred at r.t for 16 h. The mixture was filtered and the filtrate concentration to afford title product (500 mg, Y=49%) as a gray solid. ESI-MS (M+H)+ 166.0.1H NMR (400 MHz, DMSO-d6) δ 7.94 (s, 1H), 7.19 (d, J = 12.3 Hz, 1H), 6.79 (d, J = 9.0 Hz, 1H), 4.87 (s, 2H), 4.03 (s, 3H). Step 3: Preparation of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0363] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) in THF (5 mL) were added 6-fluoro-2-methyl-2H-indazol- 5-amine (163 mg, 0.99 mmol) and TEA (167 mg, 1.65 mmol), triphosgene (196 mg, 0.66 mmol) at 0℃, The mixture was stirred at r.t for 16 h. After concentration, the residue was diluted with water (10 mL), extracted with DCM (10 mLx3). The organic layer washed with brine (10 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE=3:1) to give title product (70 mg, 42 %) as a yellow solid. ESI-MS (M+H)+ 496.3.1H NMR (400 MHz, DMSO-d6) δ 12.00 (d, J = 2.8 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 7.90 (d, J = 6.0 Hz, 1H), 7.46 (d, J = 3.2 Hz, 1H), 6.58 – 6.48 (m, 1H), 4.12 (s, 3H), 4.03 – 3.98 (m, 2H), 3.47 – 3.42 (m, 4H), 3.30 – 3.27 (m, 4H), 3.17 – 3.12 (m, 2H), 1.43 (s, 9H). Step 4: Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0364] To a solution of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl / EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (4.17 mg, 10%) as a white solid. ESI-MS (M+H) +:396.1. 1H NMR (400 MHz, MeOD-d4) δ 8.42 (d, J = 7.7 Hz, 2H), 8.15 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 7.31 (d, J = 11.8 Hz, 1H), 6.59 (d, J = 6.0 Hz, 1H), 4.17 (s, 3H), 4.12 (d, J = 8.8 Hz, 2H), 3.54 – 3.45 (m, 4H), 3.30 – 3.28 (m, 4H), 3.21 – 3.16 (m, 2H). Example 36 – Preparation of N-(5-fluoro-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000235_0001
Step 1: Preparation of 5-fluoro-2-methylbenzo[d]oxazol-6-amine. [0365] To a mixture of 5-fluoro-2-methyl-6-nitrobenzo[d]oxazole (1 g, 5.10 mmol) in THF (30 mL) and MeOH (10 mL) was added Raney-Nickel (5 mL), the mixture was stirred at room temperature for 3h under H2. The mixture was filtered and the filtrate was concentrated under reduced pressure to give the title compound (820 mg, 94.44%) as an amaranth solid. ESI-MS (M+H) +: 167.1.1H NMR (400 MHz, DMSO-d6) δ 7.31 (d, J = 11.0 Hz, 1H), 6.94 (d, J = 7.6 Hz, 1H), 5.25 (s, 2H), 3.33 (s, 3H). Step 2: Preparation of tert-butyl 4-(1-((5-fluoro-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0366] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.09 mmol) and 5-fluoro-2-methylbenzo[d]oxazol-6-amine (163 mg, 0.98 mmol) in THF (4mL) were added TEA (249 mg, 2.48 mmol) and triphosgene (292 mg, 0.98 mmol) at 0oC. The mixture was stirred at r.t. for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column chromatography (PE: EA= 1: 3) to give title compound (160 mg, 65.39 %) as a white solid. ESI-MS (M+H) +: 497.2. Step 3: Preparation of N-(5-fluoro-2-methylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0367] To a mixture of tert-butyl 4-(1-((5-fluoro-2-methylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (140 mg, 0.28 mmol) in DCM (5 mL) were added HMDS (136 mg, 0.84 mmol) and TMSOTf (187 mg, 0.184 mmol) at 0oC, the mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with MeOH (5 mL), then filtered and lyophilized to give title product (55 mg, 49.21 %) as a white solid. ESI-MS (M+H) +: 397.1.1H NMR (400 MHz, DMSO-d6) δ 12.19 (s, 1H), 9.78 (s, 2H), 8.50 (d, J = 6.5 Hz, 1H), 7.94 (d, J = 6.0 Hz, 1H), 7.65 (d, J = 10.8 Hz, 1H), 6.61 (d, J = 6.1 Hz, 1H), 4.03 (t, J = 8.5 Hz, 2H), 3.58 – 3.54 (m, 4H), 3.18 – 3.14 (m, 6H), 2.59 (s, 3H). Example 37 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000236_0001
Step 1: Preparation of 6-bromo-2,7-dimethylimidazo[1,2-a]pyridine. [0368] To a solution of 5-bromo-4-methylpyridin-2-amine (10 g, 0.05 mol) in IPA(100 mL) was added 1-chloropropan-2-one (15 g, 0.16 mol), the mixture was stirred at 85 ℃ for 16 hours. The mixture was concentrated, the residue was diluted with 2M NaOH (30 mL) and stirred at room temperature for 1 h. The resulting mixture was extracted with EA (100 mL *2). The combined organic layers were dried over anhydrous Na2SO4, filtered and concentrated under vacuum. The residue was purified by silica gel column chromatography, eluted with PE: EA= 2:1 to afford title product (9 g, yield: 74.8%) as a yellow solid. ESI-MS (M+H) +: 224.9.1H-NMR (400 MHz, MeOD-d4) δ 8.97 (s, 1H), 7.41 (s, 1H), 7.22 (s, 1H), 2.44 (s, 3H), 2.34 (s, 3H). Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine. [0369] A mixture of 6-bromo-2,7-dimethylimidazo[1,2-a]pyridine (5 g, 0.02 mol), diphenylmethanimine (6.03 g, 0.03 mol), BINAP(2.77 g, 0.004 mol), Cs2CO3 (14.49 g, 0.04 mol) and Pd(OAc)2 (0.50 g, 0.002 mmol) in 1,4-dioxane (50 mL) was stirred for 16 hours at 100℃ under N2 atmosphere. The resulting mixture was concentrated under vacuum. The residue was purified by silica gel column chromatography, eluted with PE: EA (1:1) to afford product (4 g, yield: 55.4%) as a dark yellow solid. ESI-MS (M+H) +: 326.2.1H NMR (400 MHz, DMSO-d6) δ 7.74 – 7.70 (m, 2H), 7.54 (d, J = 7.2 Hz, 2H), 7.48 (dd, J = 8.0, 6.7 Hz, 2H), 7.33 (dd, J = 11.8, 9.0 Hz, 4H), 7.21 (dd, J = 7.8, 1.6 Hz, 3H), 2.24 – 2.19 (m, 6H). Step 3: Preparation of 2,7-dimethylimidazo[1,2-a]pyridin-6-amine. [0370] A solution of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine (2 g, 0.01 mol) in 3M HCl / EA(20 mL) was stirred at room temperature for 2 hours. The mixture was concentrated in vacuo, the residue was purified by C18 column chromatography eluted with CH3CN:H2O (0.1% NH3.H2O=21%) to afford title product (0.9 g, yield: 90.8 %) as a dark yellow solid. ESI-MS (M+H) +: 162.1.1H NMR (400 MHz, DMSO-d6) δ 7.65 (s, 1H), 7.36 (s, 1H), 7.06 (s, 1H), 4.55 (s, 2H), 2.22 (s, 3H), 2.16 (s, 3H). Step 4: Preparation of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0371] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (189 mg, 0.62 mmol) in THF (1.5 mL) were added TEA (188.2 mg, 1.86 mmol) and Triphosgene (221 mg, 0.75 mmol) at 0℃, the mixture was stirred at room temperature for 1 hour.2,7-dimethylimidazo[1,2-a]pyridin-6-amine (100 mg, 0.62 mmol) was added to the mixture and stirred at room temperature for 15 h. The mixture was concentrated in vacuo, the residue was purified by C18 column chromatography eluted with CH3CN:H2O (0.1% NH3.H2O) = 60-95% to afford title product (60 mg, 20%) as a yellow solid. ESI-MS (M+H) +: 492.3. Step 5: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0372] A solution of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in 3M HCl / EA(1 mL) was stirred at room temperature for 2 hours. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (21.29 mg, yield: 53.47 %) as a white solid. ESI-MS (M+H) +: 392.2. 1H NMR (400 MHz, MeOD-d4) δ 8.97 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 7.41 (s, 1H), 7.22 (s, 1H), 6.48 (d, J = 6.1 Hz, 1H), 4.03 (t, J = 8.6 Hz, 2H), 3.28 – 3.24 (m, 4H), 3.11 (t, J = 8.5 Hz, 2H), 2.97 – 2.91 (m, 4H), 2.44 (s, 3H), 2.34 (s, 3H). Example 38 – Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000238_0001
Step 1: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0373] To a solution of 6-methoxy-2-methyl-2H-indazol-5-amine (209 mg, 1.18 mmol) and TEA (1.64 mL, 11.83 mmol) in THF (21 mL) was added triphosgene (350 mg, 1.18 mmol) at 0oC, after 10 min, tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (300 mg, 0.98 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (80 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (280 mg, crude) as a white solid. ESI-MS (M+H) +: 508.2. Step 2: Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0374] To a mixture of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (260 mg, 0.51 mmol) in EA (2 mL) was added HCl/EA(5 mL, 4M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (195 mg, Y: 67.91 %) as a white solid. ESI-MS (M+H) +: 407.1.1H NMR (400 MHz, DMSO-d6) δ 11.97 (s, 1H), 8.81 (s, 2H), 8.39 (s, 1H), 8.13 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 7.01 (s, 1H), 6.59 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.02 (t, J = 8.6 Hz, 2H), 3.96 (s, 3H), 3.51 – 3.46 (m, 4H), 3.26 – 3.20 (m, 4H), 3.17 – 3.11 (m, 2H). Example 39 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000239_0001
Step 1: Preparation of tert-butyl 7-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0375] To a solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (120 mg, 0.72 mmol) and TEA (734 mg, 7.26 mmol) in THF (15 mL) was added triphosgene (215 mg, 0.72 mmol) at 0oC, after 10 min, tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.60 mmol) was added at 0oC to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (170 mg, 53.85 %) as a white solid. ESI-MS (M+H) +:522.4. Step 2: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0376] To a mixture of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (170 mg, 0.34 mmol) in EA (3 mL) was added HCl/EA (8 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with DCM: MeOH (8 mL, 10:1), then filtered and lyophilized to give title product (110 mg, 76.08 %) as an off-white solid. ESI-MS (M+H) +:422.2.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 10.01 (s, 2H), 9.64 (s, 1H), 8.18 (s, 1H), 8.08 (d, J = 9.9 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.67 (d, J = 5.4 Hz, 1H), 4.10 – 4.03 (m, 2H), 3.71 (s, 2H), 3.51 – 3.46 (m, 2H), 3.33 – 3.27 (m, 2H), 3.23 – 3.15 (m, 2H), 2.46 (s, 3H), 1.15 (t, J = 5.9 Hz, 2H), 0.94 – 0.90 (m, 2H). Example 40 – Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000240_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0377] To a mixture of 2-cyclopropylimidazo[1,2-a]pyridin-6-amine (259 mg, 1.57 mmol) and TEA (1.27 g, 12.58 mmol) in THF (40 mL) was added triphosgene (466.3 mg, 1.57 mmol) at 0oC, the mixture was stirred at 0oC for 30 min, tert-butyl (R)-4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (400 mg, 1.26 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (50 mL), stirred at rt for 1 h. The precipitate was filtered and triturated with MeOH to afford title product (400 mg, 62.37 %) as a white solid. ESI-MS (M+H) +: 510.2. Step 2: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0378] A mixture of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (400 mg, 0.78 mmol) in 4M HCl /EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (191.03 mg, yield: 59.88 %) as a white solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, D2O) δ 8.91 (d, J = 6.1 Hz, 1H), 7.74 (d, J = 7.3 Hz, 1H), 7.71 – 7.66 (m, 2H), 6.74 (d, J = 7.1 Hz, 1H), 4.31 – 4.22 (m, 2H), 4.12 – 4.03 (m, 2H), 3.55 – 3.46 (m, 3H), 3.41 – 3.26 (m, 4H), 2.42 (s, 3H), 1.33 (d, J = 6.6 Hz, 3H). Example 41 – Preparation of N-(7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000241_0001
Step 1: Preparation of 5-bromo-4-ethoxypyridin-2-amine. [0379] To a solution of 4-ethoxypyridin-2-amine (50 g, 0.07 mol) in DCM (500 mL) was added NBS (14 g, 0.08 mol) at 0℃, the mixture was stirred at room temperature for 16 hours. The mixture was concentrated under vacuum. The residue was purified by silica gel column chromatography (eluted with PE: EA= 1:3) to afford title product (45 g, yield: 57.7 %) as a yellow solid. ESI-MS (M+H) +: 218.9.1H NMR (400 MHz, DMSO-d6) δ 7.83 (s, 1H), 6.10 (s, 1H), 6.01 (s, 2H), 4.05 (q, J = 7.0 Hz, 2H), 1.35 (t, J = 7.0 Hz, 3H). Step 2: [0380] Preparation of 6-bromo-7-ethoxy-2-methylimidazo[1,2-a]pyridine. To a solution of 5-bromo-4-ethoxypyridin-2-amine (20 g, 0.09 mol) in IPA(100 mL) was added 1- chloropropan-2-one (26 g, 0.28 mol), the mixture was stirred at 80 ℃ for 16 hours. The mixture was concentrated, the residue was diluted in 2M NaOH (100 mL) and stirred at room temperature for 1 h. The resulting mixture was extracted with EA (200 mL *2). The combined organic layers were dried over anhydrous Na2SO4, filtered and concentrated under vacuum. The residue was purified by silica gel column chromatography (eluted with PE: EA= 1:4) to afford title product (6 g, yield: 25.53%) as a dark yellow solid. ESI-MS (M+H)+: 257.0.1H NMR (400 MHz, DMSO-d6) δ 8.77 (s, 1H), 7.43 (s, 1H), 6.92 (s, 1H), 4.13 (q, J = 6.9 Hz, 2H), 2.26 (s, 3H), 1.39 (t, J = 6.9 Hz, 3H). Step 3: Preparation of N-(7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0381] A mixture of 6-bromo-7-ethoxy-2-methylimidazo[1,2-a]pyridine (5 g, 0.02 mol), diphenylmethanimine (5.32 g, 0.03 mol), BINAP (2.44 g, 0.004 mol), Cs2CO3 (12.78 g, 0.04 mol) and Pd(OAc)2 (0.44 g, 0.002 mol) in 1.4-dioxane (50 mL) was stirred at 100℃ for 16 hours under N2 atmosphere. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (eluted with PE: EA=3:1) to afford title product (4 g, yield: 57.5%) as a dark yellow solid. ESI-MS (M+H)+: 356.3.1H NMR (400 MHz, DMSO-d6) δ 8.43 (d, J = 18.7 Hz, 3H), 7.77 – 7.74 (m, 4H), 7.72 – 7.67 (m, 2H), 7.58 (t, J = 7.6 Hz, 4H), 4.19 – 4.06 (m, 2H), 2.27 (s, 3H), 1.41 (t, J = 6.8 Hz, 3H). Step 4: Preparation of 7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-amine. [0382] A solution of N-(7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (2 g, 5.62 mmol) in 3M HCl / EA (20 mL) was stirred at room temperature for 2 hours. The mixture was concentrated in vacuo, the residue was purified by C18 column chromatography (eluted with 0.1% NH3.H2O in water / CH3CN) to afford title product (0.5 g, yield: 46.5 %) as a yellow solid. ESI-MS (M+H) +: 192.1.1H NMR (400 MHz, DMSO-d6) δ 7.68 (s, 1H), 7.37 (s, 1H), 6.78 (s, 1H), 4.11 (q, J = 6.9 Hz, 2H), 2.23 (s, 3H), 1.40 (t, J = 6.9 Hz, 3H). Step 5: Preparation of tert-butyl 4-(1-((7-ethoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0383] To a solution oftert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (122 mg, 0.40 mmol) in THF (1.5 mL) were added TEA (122 mg, 0.21 mmol) and Triphosgene (144 mg, 0.48 mmol) at 0℃, the mixture was stirred at room temperature for 1 hour.7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-amine (100 mg, 0.52 mmol) was added to the mixture and stirred at room temperature overnight. The mixture was concentrated in vacuo. The residue was purified by C18 column chromatography (eluted with 0.1% NH3.H2O in water / CH3CN) to afford title product (60 mg, yield: 21.97 %) as a yellow solid. ESI-MS (M+H)+: 522.3. Step 6: Preparation of N-(7-ethoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0384] A solution of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.14 mmol) in 3M HCl / EA (1 mL) was stirred at room temperature for 2 hours. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% FA in water / ACN) to give title product (17 mg, yield: 35.1%) as a white solid. ESI-MS (M+H) +:422.2.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 9.15 (s, 1H), 8.25 (s, 1H), 7.85 (d, J = 6.0 Hz, 1H), 7.51 (s, 1H), 6.87 (s, 1H), 6.53 (d, J = 6.0 Hz, 1H), 4.17 (q, J = 6.8 Hz, 2H), 3.99 (t, J = 8.4 Hz, 2H), 3.24 (s, 4H), 3.14 – 3.09 (m, 2H), 2.86 (s, 4H), 2.24 (s, 3H), 1.51 (t, J = 6.9 Hz, 3H), 1.24 (s, 1H). Example 42 – Preparation of N-(2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000243_0001
Step 1: Preparation of 5-bromo-4-(trifluoromethyl)pyridin-2-amine. [0385] To a mixture of 4-(trifluoromethyl)pyridin-2-amine (30.1 g, 185.8 mmol) in DCM (300 mL) was added NBS (36.38 g, 204.4 mmol) at 0℃. The reaction solution was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was diluted with (PE: EA=5:1) (200mL) and stirred at r.t for 2h. The precipitate was filtered and dried in vacuo to give title product (50 g, crude) as a yellow solid. ESI-MS (M+H) +: 242.7.1H NMR (400 MHz, DMSO-d6) δ 8.22 (s, 1H), 6.88 (s, 1H). Step 2: Preparation of 6-bromo-2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridine. [0386] To a mixture of 5-bromo-4-(trifluoromethyl)pyridin-2-amine (5 g, 20.75 mmol) in EtOH (50 mL) was added 1-chloropropan-2-one (3.82 g, 41.49 mmol). The reaction solution was stirred at 100℃ for 48 h. The reaction concentrated in vacuo and the residue was purified by silica gel column chromatography (DCM: MeOH=10:1) to give title product (4 g, 68%) as a yellow solid. ESI-MS (M+H) +: 280.8.1H NMR (400 MHz, DMSO-d6) δ 9.52 (s, 1H), 8.31 (s, 1H), 8.17 (s, 1H), 2.53 (s, 3H). Step 3: Preparation of N-(2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0387] To a mixture of 6-bromo-2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridine (5 g, 14.34 mmol) and diphenylmethanimine (2.59 g, 14.34 mmol) in 1,4-dioxane (40 mL) were added BINAP (1.78 g, 2.86 mmol), Pd(OAc)2 (349 mg, 1.43 mmol) and Cs2CO3 (14 g, 43.1 mmol). The reaction solution was stirred at 100℃ for 16 h under N2. The reaction was diluted with H2O (60 mL), extracted with EA (60 mLx3), the organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA=3:1) to give title product (4 g, 73.4%) as a yellow solid. ESI-MS (M+H) +: 380.3.1H NMR (400 MHz, DMSO-d6) δ 7.85 (s, 1H), 7.82 (s, 1H), 7.73 – 7.67 (m, 2H), 7.61 – 7.55 (m, 2H), 7.51 (t, J = 7.4 Hz, 2H), 7.39 (d, J = 1.5 Hz, 1H), 7.38 – 7.34 (m, 2H), 7.22 (dd, J = 7.9, 1.5 Hz, 2H), 2.28 (s, 3H). Step 4: Preparation of 2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6-amine. [0388] A mixture of N-(2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (3.6 g, 9.47 mmol) in 4M HCl / EA (21 mL) was stirred at RT for 2 h. The precipitate was filtered, diluted with sat. Na2CO3 (20 mL) and stirred at r.t for 30 min. The precipitate was filtered and dried in vacuo to give title product (1.1 g, 55%) as a yellow solid. ESI-MS (M+H) +: 216.0.1H NMR (400 MHz, DMSO-d6) δ 7.95 (s, 1H), 7.70 (s, 1H), 7.66 (s, 1H), 4.83 (s, 2H), 2.31 (s, 3H). Step 5: Preparation of tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0389] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 72-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin- 6-amine (142 mg, 0.66 mmol) in THF (3 mL) were added TEA (100 mg, 0.99 mmol) and triphosgene (243 mg, 0.82 mmol) at 0 oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:3) to give title product (100 mg, 56.0%) as a white solid. ESI-MS (M+H) +: 546.0. Step 6: Preparation of N-(2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0390] A mixture of tert-butyl 4-(1-((2-methyl-7-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.15 mmol) in 4M HCL / EA (6 mL) was stirred at RT for 1 h. The mixture concentrated in vacuo and purified by Prep-HPLC (0.1 % FA in water / CH3CN) to give title product (34 mg, 52.1 %) as a white solid. ESI-MS (M+H) +: 446.2.1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 9.13 (s, 1H), 8.33 (s, 1H), 7.92 (d, J = 5.9 Hz, 2H), 7.82 (d, J = 6.1 Hz, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.01 – 3.95 (m, 2H), 3.26 – 3.20 (m, 4H), 3.16 – 3.10 (m, 2H), 2.87 – 2.79 (m, 4H), 2.38 (s, 3H). Example 43 – Preparation of N-(6-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000245_0001
Step 1: Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine. [0391] To a solution of 5-bromo-6-methoxy-2-methyl-2H-indazole (3 g, 12.44 mmol), diphenylmethanimine (3.38 g, 18.67 mmol), Cs2CO312.16 g, 37.33 mmol) and Pd(OAc)2 (139.68 mg, 0.62 mmol) in 1,4-dioxane (50 mL) was added BIANP (774 mg, 1.24 mmol), the mixture was stirred at 100oC for 16 h under N2. The mixture was concentrated in vacuo, the residue was purified by silica gel column chromatography (PE: EA= 5: 1) to give title compound (2.45 g, 57.87 %) as a yellow solid. ESI-MS (M+H) +: 342.1.1H NMR (400 MHz, DMSO-d6) δ 7.92 (s, 1H), 7.65 (d, J = 7.5 Hz, 2H), 7.52 (d, J = 6.8 Hz, 1H), 7.46 (t, J = 7.3 Hz, 2H), 7.26 (d, J = 6.7 Hz, 3H), 7.11 (d, J = 6.8 Hz, 2H), 6.82 (s, 1H), 6.62 (s, 1H), 3.99 (s, 3H), 3.70 (s, 3H). Step 2: Preparation of 6-methoxy-2-methyl-2H-indazol-5-amine HCl salt. [0392] A mixture of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (2,15 g, 8.30 mmol) in 3M HCl / EA (20 mL) was stirred at r.t for 2 h. The precipitate was filtered and washed with EA (30 mL) and dried to give the title compound (1.62 g, crude) as a white solid. ESI-MS (M+H) +: 178.0.1H NMR (400 MHz, DMSO-d6) δ 10.09 (s, 2H), 8.36 (s, 1H), 7.85 (s, 1H), 7.18 (s, 1H), 4.12 (s, 3H), 3.93 (s, 3H). Step 3: Preparation of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0393] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (300 mg, 0.98 mmol) and 6-methoxy-2-methyl-2H-indazol-5-amine HCl salt (349 mg, 1.97 mmol) in THF (30 mL) was added TEA (498 mg, 4.93 mmol), then triphosgene (584 mg,1.97 mmol) was added slowly at 0oC. The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column chromatography (PE: EA= 1: 1) to give the compound (230 mg, 45.98 %) as a yellow solid. ESI-MS (M+H) +: 508.3 Step 4: Preparation of N-(6-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0394] To a mixture of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (140 mg, 0.27 mmol) in DCM (0.5 mL) was added 1 M BBr3 (3 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (35 mg, Y: 32.24%) as a white solid. ESI-MS (M+H) +: 394.2.1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 10.19 (s, 1H), 8.34 (s, 1H), 8.23 (s, 1H), 8.05 (s, 1H), 7.84 (d, J = 6.1 Hz, 1H), 6.84 (s, 1H), 6.49 (d, J = 6.1 Hz, 1H), 4.02 (s, 3H), 4.01 – 3.96 (m, 2H), 3.24 – 3.21 (m, 4H), 3.12 – 3.08 (m, 2H), 2.89 – 2.84 (m, 4H). Example 44 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide benzoate salt.
Figure imgf000247_0001
Step 1: Preparation of 5-bromo-4-fluoropyridin-2-amine. [0395] To a solution of 4-fluoropyridin-2-amine (50 g, 0.45 mol) in ACN (600 mL) was added NBS (79 g, 0.45 mol), the mixture was stirred at 15 oC for 16 h. The mixture was concentrated in vacuo and the residue was diluted with water (500 mL), extracted with EA (1000 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The residue was triturated with PE/EA (1200 mL, 10/1), stirred at r.t overnight. The precipitate was filtered and dried to give title product (76 g, Y: 89.21 %) as a white solid. ESI-MS (M+H) +: 191.0.1H NMR (400 MHz, CDCl3) δ 8.11 (d, J = 9.5 Hz, 1H), 6.26 (d, J = 10.0 Hz, 1H), 4.69 (s, 2H). Step 2: Preparation of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine. [0396] To a solution of 5-bromo-4-fluoropyridin-2-amine (110 g, 0.58 mol) and 1-bromo- 2,2-dimethoxypropane (127 g, 0.69 mol) in IPA (1000 mL) was added PPTS (15.9 g, 63.35 mmol), the mixture was stirred at 85oC for 16 h. The reaction was concentrated in vacuo, the residue was diluted with water (1000 mL), adjusted pH to 11 by sat. NaOH, stirred at r.t for 1h. The precipitate was filtered and purified by column chromatography (EA) to give title product (93.3 g, 70.75 %) as a yellow solid. ESI-MS (M+H) +: 231.0.1H NMR (400 MHz, CDCl3) δ 8.14 (d, J = 6.5 Hz, 1H), 7.20 (s, 1H), 7.16 (d, J = 8.9 Hz, 1H), 2.35 (d, J = 0.6 Hz, 3H). Step 3: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0397] To a solution of 6-bromo-7-fluoro-2-methylimidazo[1,2-a]pyridine (50 g, 0.22 mol), diphenylmethanimine (43.96 mL, 0.26 mol), Cs2CO3 (142 g, 0.43 mol) and Pd(OAc)2 (4.90 g, 21.83 mmol) in 1,4-dioxane (500 mL) was added BIANP (27.19 g, 43.66 mmol), the mixture was stirred for at 100 oC for 16 h under N2. The mixture was concentrated in vacuo and the residue was purified by silica gel column chromatography (PE: EA= 3: 1) to give title product (51.4 g, 71.49 %) as a yellow solid. ESI-MS (M+H) +: 330.2.1H NMR (400 MHz, DMSO-d6) δ 8.00 (d, J = 7.7 Hz, 1H), 7.69 (dd, J = 5.2, 3.3 Hz, 2H), 7.63 – 7.57 (m, 1H), 7.50 (t, J = 7.5 Hz, 2H), 7.45 (s, 1H), 7.40 – 7.35 (m, 3H), 7.23 – 7.19 (m, 3H), 2.23 (s, 3H). Step 4: Preparation of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride. [0398] To a solution of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (50 g, 151.80 mmol) in EA (20 mL) was added HCl in EA (400 mL, 4 M), the mixture was stirred at r.t for 16 h. The precipitate was filtered, triturated with DCM/MeOH (2 L, 10/1) and filtered to give the title compound (28.8 g, 94.09 %) as an off- white solid. ESI-MS (M+H) +: 166.2.1H NMR (400 MHz, DMSO-d6) δ 8.63 (s, 2H), 8.22 (d, J = 7.4 Hz, 1H), 7.96 (s, 1H), 7.74 (d, J = 10.0 Hz, 1H), 2.40 (s, 3H). Step 5: Preparation of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine. [0399] A solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (50 g, 119.19 mmol) in H2O (800 mL) was adjusted to pH = 9 with solid Na2CO3, then the mixture was stirred for at r.t for 2 h. The mixture was extracted with EA (1000 mL×6). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuum to give title product (33 g, 80.57%) as a brown solid. ESI-MS (M+H) +: 166.2.1H NMR (400 MHz, DMSO-d6) δ 7.84 (d, J = 8.4 Hz, 1H), 7.51 (s, 1H), 7.22 (d, J = 11.7 Hz, 1H), 4.93 (s, 2H), 2.28 (s, 3H). Step 6: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [0400] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (50 g, 32.34 mmol), tert-butyl 2,2-dimethylpiperazine-1-carboxylate (83.17 g, 38.81 mmol) in DIEA (50 mL) was stirred at 140 oC for 48 h. The mixture was diluted with water (200 mL), extracted with EA (200 mL×3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo. The residue was triturated with EA (1 L) and filtered to afford title product (85 g, 79.05 %) a white solid. ESI-MS (M+H) +: 333.2.1H NMR (400 MHz, CDCl3) δ 7.67 (d, J = 6.0 Hz, 1H), 5.98 (d, J = 6.1 Hz, 1H), 4.22 (s, 1 H), 3.75 – 3.70 (m, 2H), 3.54 (t, J = 8.1 Hz, 2H), 3.49 – 3.45 (m, 2H), 3.33 (s, 2H), 3.17 (t, J = 8.2 Hz, 2H), 1.49 (s, 9H), 1.43 (s, 6H). Step 7: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0401] To a solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (4.97 g, 30.08mmol) and TEA (41.8 mL,300.80 mmol) in THF (500 mL) was added triphosgene (8.93 g, 30.08 mmol) at 0oC and stirred at for 30 min, tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (8 g, 24.06 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (1 L) and stirred at r.t for 2 h. The precipitate was filtered and triturated with MeOH (300 mL) to give the compound (8 g, 63.49 %) as a white solid. ESI-MS (M+H) +: 524.2.1H NMR (400 MHz, DMSO-d6) δ 12.11 (d, J = 1.9 Hz, 1H), 9.19 (d, J = 7.4 Hz, 1H), 7.81 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.41 (d, J = 11.6 Hz, 1H), 6.41 (d, J = 6.3 Hz, 1H), 4.00 – 3.93 (m, 2H), 3.73 – 3.67 (m, 2H), 3.60 – 3.55 (m, 2H), 3.17 (d, J = 5.2 Hz, 4H), 2.28 (s, 3H), 1.43 (s, 9H), 1.38 (s, 6H). Step 8: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0402] To a mixture of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (28 g, 53.47 mmol) in EA (30 mL) was added HCl/EA(350 mL, 4M). The mixture was stirred at r.t for 16 h. The precipitate was filtered and diluted with water (300 mL), then adjusted to pH 9 with saturated sodium carbonate aqueous solution. The mixture was stirred at r.t for 4 h. The precipitate was filtered, washed with water (1 L) and dried to give the title compound (17.5 g, 77.4 %) as a white solid. ESI-MS (M+H) +: 424.1.1H NMR (400 MHz, DMSO-d6) δ 11.93 (d, J = 2.0 Hz, 1H), 9.19 (d, J = 7.4 Hz, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.72 (s, 1H), 7.42 (d, J = 11.6 Hz, 1H), 6.59 (d, J = 6.2 Hz, 1H), 4.05 – 3.98 (m, 2H), 3.42 – 3.38 (m, 2H), 3.25 – 3.21 (m, 2H), 3.20 – 3.11 (m, 4H), 2.29 (s, 3H), 1.30 (s, 6H). Step 9: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate salt. [0403] To a solution of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (35 g, 82.74 mmol) in EtOH (500 mL), DCM (500 mL) and MeOH (500 mL) was added benzoate (10.60 g, 86.87 mmol) at 50 oC, and the mixture was stirred at 50 oC for 16 h. The mixture was concentrated in vacuo, the residue was triturated with DCM (100 mL) and stirred at r.t for 2 h. The precipitate was filtered and dried to give title product (39 g, 85.5%) as an off-white solid. ESI-MS (M+H) +: 424.2.1H NMR (400 MHz, DMSO-d6) δ 11.92 (s, 1H), 9.19 (d, J = 7.4 Hz, 1H), 7.94 (t, J = 7.0 Hz, 3H), 7.72 (s, 1H), 7.62 (t, J = 7.3 Hz, 1H), 7.50 (t, J = 7.6 Hz, 2H), 7.42 (d, J = 11.7 Hz, 1H), 6.60 (d, J = 6.1 Hz, 1H), 4.02 (t, J = 8.4 Hz, 2H), 3.43 (s, 2H), 3.26 (s, 2H), 3.18 (d, J = 8.0 Hz, 4H), 2.29 (s, 3H), 1.33 (s, 6H). Example 45 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-
Figure imgf000250_0001
Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0404] To a mixture of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (110 mg, 0.27 mmol), (HCHO)n (75 mg, 0.83 mmol) and TEA (84 mg, 0.83 mmol) in MeOH (2 mL) was added NaBHCN (50 mg, 0.83mmol).The mixture was stirred at r.t for 2 h. The mixture was filtered and the filtrate was purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (10 mg, Y: 45.95 %) as an orange solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, MeOD-d4) δ 9.59 (d, J = 6.3 Hz, 1H), 7.98 (d, J = 5.9 Hz, 1H), 7.92 (s, 1H), 7.81 (d, J = 9.5 Hz, 1H), 6.65 (d, J = 5.9 Hz, 1H), 4.20 – 4.12 (m, 2H), 4.04 – 3.79 (m, 2H), 3.70 – 3.38 (m, 4H), 3.29 – 3.16 (m, 4H), 2.98 (s, 3H), 2.51 (s, 3H). Example 46 – Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000251_0001
Step 1: Preparation of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate. [0405] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (350 mg, 2.26 mmol) in DIEA (1.5 g, 11.30 mmol) was added tert-butyl (R)-methyl(pyrrolidin-3-yl)carbamate (678 mg, 3.39 mmol). The reaction mixture was stirred at 140 ℃ for 16 h in a sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with DCM (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH=10:1) to give title product (500 mg, yield: 69 %) as a yellow oil. ESI-MS (M+H) +:319.4.1H NMR (400 MHz, DMSO-d6) δ 7.42 (d, J = 6.0 Hz, 1H), 5.81 (d, J = 6.1 Hz, 1H), 5.76 (d, J = 5.8 Hz, 1H), 4.71 – 4.49 (m, 1H), 3.57 – 3.51 (m, 2H), 3.40 (d, J = 9.3 Hz, 4H), 3.22 – 3.18 (m, 2H), 2.74 (s, 3H), 2.05 – 1.96 (m, 2H), 1.41 (s, 9H). Step 2: Preparation of tert-butyl (R)-(1-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate. [0406] To a mixture of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate (100 mg, 0.31 mmol) in THF (5 mL) were added 8- fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (155 mg, 0.94 mmol), TEA (157 mg, 1.55 mmol) and triphosgene (184 mg, 0.62 mmol) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: EA=2:1) to give title product (80 mg, yield: 50 %) as a gray solid. ESI-MS (M+H) +:510.6.1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 8.81 (t, J = 4.3 Hz, 1H), 7.81 (dd, J = 12.3, 4.4 Hz, 2H), 7.22 (dd, J = 12.6, 1.5 Hz, 1H), 6.23 (d, J = 6.2 Hz, 1H), 3.92 (dd, J = 16.3, 7.1 Hz, 2H), 3.71 – 3.64 (m, 2H), 3.55 – 3.34 (m, 5H), 2.76 (s, 3H), 2.32 (s, 3H), 2.11 – 2.01 (m, 2H), 1.42 (s, 9H). Step 3: Preparation of R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0407] To a mixture of tert-butyl (R)-(1-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate (60 mg, 0.12 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo give title compound (14.37 mg, 29 %) as a white solid. ESI-MS (M+H) +:410.2.1H NMR (400 MHz, MeOD-d4) δ 9.12 (s, 1H), 8.09 (s, 1H), 8.04 (d, J = 12.0 Hz, 1H), 7.83 – 7.71 (m, 1H), 6.72 – 6.57 (m, 1H), 4.46 – 4.28 (m, 2H), 4.21 – 3.89 (m, 5H), 3.79 – 3.65 (m, 2H), 2.83 (s, 3H), 2.57 (s, 3H), 2.56 – 2.49 (m, 1H), 2.39 – 2.28 (m, 1H). Example 47 – Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000252_0001
Step 1: Preparation of tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate. [0408] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine(1 g, 6.45 mmol) and tert-butyl (S)-methyl(pyrrolidin-3-yl)carbamate (3 mL) was stirred at 140 oC for 16h in a sealed tube. The mixture was concentrated in vacuo. The residue was purified by silica gel column (DCM: MeOH = 10:1) to provide title product (1.9 g, yield: 91%) as a brown solid. ESI-MS (M+H) +:319.3.1H NMR (400 MHz, DMSO-d6) δ 7.44 (d, J = 7.1 Hz, 1H), 6.14 (d, J = 7.3 Hz, 1H), 3.80 – 3.71 (m, 2H), 3.65 – 3.50 (m, 5H), 3.44 – 3.32 (m, 2H), 2.75 (s, 3H), 2.14 – 1.97 (m, 2H), 1.42 (s, 9H). Step 2: Preparation of tert-butyl (S)-(1-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate. [0409] To a solution of tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate (100 mg, 0.31 mmol) in THF (5 mL) were added TEA (313 mg, 3.10 mmol) and triphosgene (276 mg, 0.93 mmol) at 0 oC. Then 8-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (93 mg, 0.47 mmol) was added to the reaction after stirring for 0.5 h. Then the mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:3) to provide title product (140 mg, yield: 89%) as a white solid. ESI-MS (M+H) +:510.4. Step 3: Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0410] To a solution of tert-butyl (S)-(1-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate (130 mg, 0.26 mmol) in EtOAc (2 mL) was added 4M HCl/EtOAc (6 mL) at 0 oC. Then the mixture was stirred at r.t for 2 hours. The reaction mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title compound (35 mg, yield: 33%) as a white solid. ESI-MS (M+H)+: 410.1.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 8.81 (s, 1H), 8.28 (s, 1H), 7.83 (s, 1H), 7.77 (d, J = 6.0 Hz, 1H), 7.22 (d, J = 12.6 Hz, 1H), 6.19 (d, J = 6.0 Hz, 1H), 3.92 (t, J = 8.7 Hz, 2H), 3.70 – 3.64 (m, 2H), 3.62 – 3.60 (m, 1H), 3.55 – 3.62 (m,, 1H), 3.38 – 3.40 (m,, 2H), 3.27 – 3.24 (m,, 1H), 2.32 (s, 6H), 2.07 – 1.99 (m,, 1H), 1.82 – 1.78 (m, 1H). [0411] Example 48 – Preparation of N-(6-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4- (piperazin-1-yl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridine-1-carboxamide formate.
Figure imgf000254_0001
S 4 6 h
Figure imgf000254_0002
Figure imgf000254_0003
Figure imgf000254_0004
l Step 7
Figure imgf000254_0005
Compound 48 Step 1: Preparation of methyl 5-bromo-2-methyl-2H-indazole-6-carboxylate. [0412] To a solution of methyl 5-bromo-2-methyl-2H-indazole-6-carboxylate (3 g, 11.81 mmol) in EA (30 mL) was added trimethyloxonium tetrafluoroborate (2.1 g, 14.17 mmol). The resulting mixture was stirred at RT for 2 h. The mixture was diluted with water (30 mL), extracted with EA (30 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (3 g, 93%) as a yellow solid. ESI-MS (M+H+CH3CN) +: 310.0.1H NMR (400 MHz, DMSO-d6) δ 8.44 (s, 1H), 8.14 (s, 1H), 8.05 (s, 1H), 4.23 (s, 3H), 3.88 (s, 3H). Step 2: Preparation of (5-bromo-2-methyl-2H-indazol-6-yl) methanol. [0413] To a solution of methyl 5-bromo-2-methyl-2H-indazole-6-carboxylate (3 g, 11.19 mmol) in dry-THF (30 mL) was added LiAlH4 (851 mg, 22.39 mmol) at 0oC. The resulting mixture was stirred at 0 o C for 2 h. The mixture was quenched by water (0.85 mL) at 0 o C, followed by 15% NaOH (0.85 mL) and water (1.7 mL). The mixture was diluted with THF (5 mL) and Na2 SO4. The resulting mixture was stirred at RT for 0.5 h. The mixture was filtered and the filtrate was concentrated in vacuo to give title product (3 g, crude) as a white solid. ESI-MS (M+H) +: 243.0.1H NMR (400 MHz, DMSO-d6) δ 8.28 (d, J = 14.7 Hz, 1H), 7.97 (s, 1H), 7.69 (s, 1H), 4.55 (s, 2H), 4.16 (s, 3H). Step 3: Preparation of 5-bromo-2-methyl-2H-indazole-6-carbaldehyde. [0414] To a solution of (5-bromo-2-methyl-2H-indazol-6-yl) methanol (3 g, 12.50 mmol) in DCM (30 mL) was added Dess-martain (6.4 g, 15.00 mmol). The resulting mixture was stirred at RT for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo. The crude was purified by silica gel column (PE/EA=2:1) to give title product (2.3 g, Y: 68 %) as a yellow solid. ESI-MS (M+H) +:238.9.1H NMR (400 MHz, DMSO-d6) δ 10.29 (s, 1H), 8.48 (d, J = 3.2 Hz, 1H), 8.21 (t, J = 11.8 Hz, 2H), 4.25 (s, 3H). Step 4: Preparation of 5-bromo-6-(difluoromethyl)-2-methyl-2H-indazole. [0415] To a solution of 5-bromo-2-methyl-2H-indazole-6-carbaldehyde (2 g, 8.40 mmol) in DCM (20 mL) was added DAST (2299 mg, 14.29 mmol) at 0 oC under N2. The resulting mixture was stirred at RT for 16 h. The mixture was quenched by aq NaHCO3 (15 mL) at 0 o C, extracted with DCM (20 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE/EA=2:1) to give title product (1.2 g, Y: 55 %) as a yellow solid. ESI-MS (M+H) +:261.1.1H NMR (400 MHz, DMSO-d6) δ 8.44 (d, J = 3.6 Hz, 1H), 8.18 (s, 1H), 7.96 (s, 1H), 7.31 – 7.02 (m, 1H), 4.22 (d, J = 5.0 Hz, 3H). Step 5: Preparation of N-(6-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-1, 1- diphenylmethanimine. [0416] To a solution of 5-bromo-6-(difluoromethyl)-2-methyl-2H-indazole (1 g, 3.83 mol) and diphenylmethanimine (1040 mg, 5.75 mmol) in 1,4-dioxane (10 mL) were added BINAP (479 mg, 0.77 mmol), Pd(OAC)2 (86 mg, 0.38 mmol) and Cs2CO3 (3734 mg, 11.49 mmol). The reaction solution was stirred at 100℃ for 16 h under N2. The reaction was diluted with H2O (10 mL), extracted with EA (10 mLx3), the organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by reserve silica gel column chromatography (PE: EA=2:1) to give title product (1.7 g, yield: 99%) as a yellow solid. ESI- MS (M+H) +: 362.1.1H NMR (400 MHz, DMSO-d6) δ 8.11 (s, 1H), 7.81 (s, 1H), 7.75 – 7.70 (m, 2H), 7.57 – 7.52 (m, 1H), 7.51 – 7.46 (m, 2H), 7.36 – 7.26 (m, 4H), 7.21 – 7.17 (m, 2H), 6.98 (t, J = 31.5 Hz, 1H), 4.09 (s, 3H). Step 6: Preparation of 6-(difluoromethyl)-2-methyl-2H-indazol-5-amine HCl salt. [0417] To a solution of N-(6-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-1,1- diphenylmethanimine (1.5 g, 5.75 mmol) in EA (10 mL) was added 4M HCl / EA (10 mL). The reaction solution was stirred at RT for 2 h. The precipitate was filtered, washed with EA (20 mL), then diluted with EA (20 mL) and stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (1.068 g, y: 90%) as a yellow solid. ESI-MS (M+H) +: 198.2.1H NMR (400 MHz, DMSO-d6) δ 8.59 (s, 1H), 8.06 (s, 1H), 8.00 (s, 1H), 7.47 (t, J = 54.6 Hz, 1H), 4.24 (s, 3H). Step 7: Preparation of tert-butyl 4-(1-((6-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridin-4-yl) piperazine-1-carboxylate. [0418] To a solution of tert-butyl 4-(2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridin-4-yl) piperazine-1-carboxylate (100 mg, 0.33 mmol) and 6-(difluoromethyl)-2-methyl-2H-indazol- 5-amine HCl salt (95 mg, 0.39 mmol) in THF (2 mL) were added TEA (100 mg, 0.99 mmol) and triphosgene (116 mg, 0.39 mmol) at 0oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2 SO4 and concentrated in vacuo. The crude was purified by silica gel column (EA) to give title product (60 mg, 34%) as a yellow solid. ESI-MS (M+H) +: 528.0. Step 8: Preparation of N-(6-(difluoromethyl)-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridine-1-carboxamide formate. [0419] To a solution of tert-butyl 4-(1-((6-(difluoromethyl)-2-methyl-2H-indazol-5-yl) carbamoyl)-2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridin-4-yl) piperazine-1-carboxylate (60 mg, 0.11 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (14.89 mg, yield: 30 %) as a white solid. ESI-MS (M+H) +: 428.2.1H NMR (400 MHz, DMSO-d6) δ 11.72 (s, 1H), 8.38 (s, 1H), 8.31 (s, 1H), 8.19 (s, 1H), 7.92 – 7.78 (m, 2H), 7.13 (t, J = 54.8 Hz, 1H), 6.50 (d, J = 6.1 Hz, 1H), 4.19 (s, 3H), 4.01 – 3.96 (m, 2H), 3.28 – 3.21 (m, 4H), 3.15 – 3.08 (m, 2H), 2.85 (s, 4H). Example 49 – Preparation of N-(2,5-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000257_0001
Step 1: Preparation of 2,5-dimethyl-6-nitrobenzo[d]oxazole. [0420] To a solution of 2,5-dimethylbenzo[d]oxazole (9.7 g, 0.066 mol) in H2SO4 (100 mL) was added HNO3 (8.3 mL, 0.198 mol) at 0 oC. Then, the mixture was stirred at 0 oC for 3 h. The solution was slowly poured into ice-water. The precipitate was filtered, washed with water and dried in vacuo to give title product (10 g, yield: 79.36%) as a white solid. ESI-MS (M+H) +: 192.9.1H NMR (400 MHz, DMSO-d6) δ 8.42 (s, 1H), 7.79 (s, 1H), 2.68 (s, 3H), 2.60 (s, 3H). Step 2: Preparation of 2,5-dimethylbenzo[d]oxazol-6-amine. [0421] A solution of 2,5-dimethyl-6-nitrobenzo[d]oxazole (10 g, 0.052 mol), NH4HCO3 (16.38 g, 0.26 mol) and 10% Pd/C (1 g) in MeOH (100 mL) was stirred at 80 oC for 0.5 h under H2. The mixture was filtered and the filtrate was concentrated in vacuo. The crude product was purified by column chromatography on silica gel eluted with EA:PE = 1:5 to give title product (2.4 g, yield: 28.49%) as a white solid. ESI-MS (M+H) +: 163.1.1H NMR (400 MHz, DMSO-d6) δ 7.18 (s, 1H), 6.78 (s, 1H), 5.00 (s, 2H), 2.47 (s, 3H), 2.11 (s, 3H). Step 3: Preparation of tert-butyl 4-(1-((2,5-dimethylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0422] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (200 mg, 0.66 mmol) and 2,5-dimethylbenzo[d]oxazol-6-amine (214 mg, 1.32 mmol) in THF (80 mL) were added TEA (458 μL, 3.30 mmol) and triphosgene (392 mg, 1.32 mmol, dissolved in THF (1 mL)) at 0 oC. Then, the mixture was stirred at RT for 16 h. The mixture was diluted with water (30 mL) and extracted with EA (30 mL x 3). The mixture was concentrated in vacuo and purified by column chromatography on silica gel eluted with DCM:MeOH = 50:1 to give title product (70 mg, yield: 21.56%) as a white solid. ESI-MS (M+H) +: 493.3.1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 8.39 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.50 (s, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.04 – 3.98 (m, 2H), 3.44 (s, 6H), 3.26 – 3.21 (m, 2H), 3.18 – 3.04 (m, 8H), 1.43 (s, 9H). Step 4: Preparation of N-(2,5-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0423] To a solution of tert-butyl 4-(1-((2,5-dimethylbenzo[d]oxazol-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.12 mmol) in DCM (5 mL) were added HMDS (51 μL, 0.24 mmol) and TMSOTf (42 μL, 0.24 mmol) at 0 oC. Then, the mixture was stirred at RT for 2 h. The mixture was diluted with water (10 mL) and extracted with DCM (20 mL x 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (27.83 mg, 59.16%) as a white solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6) δ 11.86 (s, 1H), 8.38 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 7.48 (s, 1H), 6.49 (d, J = 6.1 Hz, 1H), 3.98 (t, J = 8.5 Hz, 2H), 3.22 – 3.15 (m, 4H), 3.10 (t, J = 8.5 Hz, 2H), 2.84 – 2.72 (m, 4H), 2.55 (s, 3H), 2.42 (s, 3H). Example 50 – Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000258_0001
Step 1: Preparation of N-(3-fluoro-2-methylphenyl)acetamide. [0424] To a solution of 3-fluoro-2-methylaniline (8 g, 64 mmol) in DCM (100 mL) was added Ac2O (9.8 g, 96 mmol). The mixture was stirred at room temperature for 2 hours. The mixture was concentrated in vacuo to provide title compound (10 g, crude) as a pink solid. ESI-MS (M+H) +:168.1.1H NMR (400 MHz, DMSO-d6) δ 9.46 (s, 1H), 7.31 – 7.10 (m, 2H), 7.04 – 6.90 (m, 1H), 2.12 – 2.04 (m, 6H). Step 2: Preparation of N-(4-bromo-3-fluoro-2-methylphenyl)acetamide. [0425] To a mixture of N-(3-fluoro-2-methylphenyl)acetamide (11 g, 65.87 mmol) in AcOH (110 mL) was added Br2 (31.6 g, 197.6 mmol). The mixture was stirred at RT for 2 h. The mixture was diluted with water (400 mL), the precipitate was filtered and washed with H2O (50 mL), dried in vacuum to give title product (12 g, 74.5 %) as a yellow solid. ESI-MS (M+H) +:246.0.1H NMR (400 MHz, DMSO-d6) δ 9.52 (s, 1H), 7.47 (t, J = 8.3 Hz, 1H), 7.27 (d, J = 8.4 Hz, 1H), 2.14 (d, J = 2.3 Hz, 3H), 2.07 (s, 3H). Step 3: Preparation of 6-bromo-5-fluoro-2,4-dimethylbenzo[d]oxazole. [0426] To a suspension of N-(4-bromo-3-fluoro-2-methylphenyl)acetamide (13.4 g, 54.69 mmol) in DMF :HOAC(10 mL: 80 mL) were added K2S2O8 (22.2 g, 82.04 mmol), TfOH (8.2 g, 54.69 mmol) and Pd(OAc)2 (1.2 g, 5.47 mmol). The reaction mixture was stirred at 100 oC for 16 h. The mixture was concentrated in vacuo. The crude was purified by flash column chromatography (PE / EA = 0 % to 50 %) to provide title product (2.5 g, 18.8 %) as a yellow solid. ESI-MS (M+H) +:244.0.1H NMR (400 MHz, DMSO-d6) δ 7.97 (d, J = 5.5 Hz, 1H), 2.61 (s, 3H), 2.45 (d, J = 1.7 Hz, 3H). Step 4: Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine. [0427] To a mixture of 6-bromo-5-fluoro-2,4-dimethylbenzo[d]oxazole (3.2 g, 13.17 mmol), diphenylmethanimine (3.6 g, 19.75 m mol) in 1,4-dioxane (100 mL) were added Cs2CO3 (13 g, 39.51 mmol), BINAP (1.6 g, 2.63 mmol) and Pd(OAc)2 (300 mg,1.32 mmol), the mixture was charged with N2 for three times and stirred at 100 oC for 16 h. The reaction mixture was evaporated to give crude title compound. The crude was purified by silica gel column chromatography eluted with (EtOAc/PE=1:2) to give title compound (3 g, crude) as a brown solid. ESI-MS (M+H) +:345.1.1H NMR (400 MHz, DMSO-d6) δ 7.71 – 7.68 (m, 2H), 7.59 – 7.54 (m, 1H), 7.51 – 7.47 (m, 3H), 7.33 – 7.31 (m, 2H), 7.21 – 7.16 (m, 2H), 6.92 (d, J = 6.5 Hz, 1H), 2.52 (s, 3H), 2.29 (s, 3H). Step 5: Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine. [0428] To a solution of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-1,1- diphenylmethanimine (3 g, 8.72 mmol) was added HCl in EA (30 mL, 4 M) at RT, the mixture was stirred for 1 h at RT. The mixture was concentrated in vacuo and the residue was diluted with water (10 mL), adjusted the PH≈ 8 with aq.NaHCO3. Exacted with DCM (80 mL*3), the organic layer was washed with brine, dried over Na2SO4 and evaporated in vacuo. The residue was purified by silica gel column chromatography eluted with (EtOAc/PE=1:3) to give title compound (600 mg, 38.3 %) as a brown solid. ESI-MS (M+H) +:181.1.1H NMR (400 MHz, DMSO-d6) δ 6.77 (d, J = 7.2 Hz, 1H), 5.17 (s, 2H), 2.49 (s, 3H), 2.33 (s, 3H). Step 6: Preparation of tert-butyl 4-(1-((5-fluoro-2,4-dimethylbenzo[d]oxazol-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0429] To a solution of 5-fluoro-2,4-dimethylbenzo[d]oxazol-6-amine (150 mg, 0.83 mmol) and tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (278 mg, 0.91 mmol) in THF (15 mL) was added TEA (421 mg, 4.18 mmol), triphosgene (271 mg, 0.91 mmol) was added slowly at 0oC. The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column chromatography (PE: EA= 1: 2) to give the compound (230 mg, crude) as a yellow solid. ESI-MS (M+H) +: 511.2. Step 7: Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0430] To a mixture of tert-butyl 4-(1-((5-fluoro-2,4-dimethylbenzo[d]oxazol-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (200 mg, 0.39 mmol) in DCM (5 mL) were added HMDS (189 mg, 1.18 mmol) and TMSOTf (261 mg, 1.18 mmol) at 0oC, the mixture was stirred at r.t for 2 h. The mixture was diluted with H2O (50 mL), extracted with EA (30 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuum. The crude was purified by prep-HPLC (0.05 % NH3.H2O in water / ACN) to give title product (6 mg, Y: 3.73 %) as a white solid. ESI-MS (M+H) +: 411.2.1H NMR (400 MHz, DMSO-d6) δ 12.25 (s, 1H), 8.35 (d, J = 6.2 Hz, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.04 – 3.95 (m, 2H), 3.22 (d, J = 4.8 Hz, 4H), 3.15 – 3.10 (m, 2H), 2.85 – 2.77 (m, 4H), 2.59 (s, 3H), 2.45 (s, 3H). Example 51 – Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide .
Figure imgf000261_0001
Step 1: Preparation of tert-butyl 7-(1-((5-fluoro-2,4-dimethylbenzo[d]oxazol-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0431] To a mixture of 5-fluoro-2,4-dimethylbenzo[d]oxazol-6-amine (163.6 mg, 0.91 mmol) and tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (150 mg, 0.45 mmol) in THF (10 mL) were added TEA (227.2 mg, 2.25 mmol) and triphosgene (267.3mg, 0.90 mmol) at 0oC for 15 min. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo, the crude was purified by silica gel column chromatography (EA: PE= 100 %) to give title product (80 mg, yield: 16.4 %) as a yellow solid. ESI-MS (M+H) +: 537.2. Step 2: Preparation of N-(5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0432] A mixture of tert-butyl 7-(1-((5-fluoro-2,4-dimethylbenzo[d]oxazol-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (70 mg, 0.13 mmol), HMDS (42 mg, 0.26mmol) and TMSOTf (58 mg, 0.26 mmol) in DCM (10 mL) was stirred at 0 oC for 2 h. The mixture was diluted with water (20 mL), extracted with DCM (20 mL×3). The organic layer was washed with brine (20 mL), dried with Na2SO4 and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% NH3·H2O in H2O / ACN) to give title product (1.2 mg, yield: 2.11 %) as a white solid. ESI-MS (M+H) +: 437.2. 1H NMR (400 MHz, CDCl3) δ 12.16 (s, 1H), 8.40 (d, J = 6.3 Hz, 1H), 7.96 (d, J = 6.0 Hz, 1H), 6.34 (d, J = 6.0 Hz, 1H), 4.20 – 4.13 (m, 2H), 3.29 (d, J = 4.9 Hz, 2H), 3.20 – 3.13 (m, 2H), 3.13 – 3.10 (m, 2H), 3.09 – 3.04 (m, 2H), 2.62 (s, 3H), 2.52 (d, J = 1.6 Hz, 3H), 0.89 – 0.81 (m, 2H), 0.70 – 0.61 (m, 2H). Example 52 – Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000262_0001
Step 1: Preparation of 2,6-dimethyl-5-nitro-2H-indazole. [0433] To a solution of 6-methyl-5-nitro-1H-indazole (1 g, 0.01 mol) in EA (10 mL) was added Trimethyloxonium Tetrafluoroborate (1 g, 0.01 mol), the mixture was stirred at room temperature for 16 hours. The mixture was diluted with water (50 mL), extracted with EA (30 mL *2). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by C18 column chromatography eluted with CH3CN: H2O (0.1% NH3.H2O) = 30-80 % to afford product (1 g, yield: 92.7%) as a yellow solid. ESI-MS (M+H) +:192.1.1H NMR (400 MHz, DMSO-d6) δ 8.63 (s, 1H), 8.60 (s, 1H), 7.61 (s, 1H), 4.21 (s, 3H), 2.56 (d, J = 0.8 Hz, 3H). Step 2: Preparation of 2,6-dimethyl-2H-indazol-5-amine. [0434] To a solution of 2,6-dimethyl-5-nitro-2H-indazole (3 g, 15.62 mmol) in MeOH (30 mL) were added Raney Nickel (300 mg,) and NH3.H2O (3 mL). The mixture was charged with H2 for three times and stirred at r.t for 2 h. The mixture was filtered and the filtrate was concentrated in vacuo to afford title product (1.4 g, yield: 55 %) as a purple solid. ESI-MS (M+H) +:162.1.1H NMR (400 MHz, DMSO-d6) δ 7.81 (s, 1H), 7.20 (s, 1H), 6.65 (s, 1H), 4.54 (s, 2H), 4.01 (s, 3H), 2.18 (s, 3H). Step 3: Preparation of phenyl (2,6-dimethyl-2H-indazol-5-yl)carbamate. [0435] To a solution of 2,6-dimethyl-2H-indazol-5-amine (100 mg, 0.62 mmol) in DCM (5 mL) were added phenyl carbonochloridate (116 mg, 0.75 mmol) and pyridine (147 mg, 1.86 mmol) at 0℃. The mixture was stirred at r.t for 2 h. The reaction mixture was diluted with water (10 mL) and extracted with DCM (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo to give title product (100 mg, yield: 57 %) as a brown solid. ESI-MS (M+H) +:282.2. Step 4: Preparation of tert-butyl 4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate formate. [0436] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (70 mg, 0.23 mmol) in THF (5 mL) were added phenyl (2,6-dimethyl-2H- indazol-5-yl)carbamate (65 mg, 0.23 mmol) and TEA (70 mg, 0.69 mmol). The reaction mixture was stirred at 70℃ for 16 h in a sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (30 mg, Y: 26 %) as a white solid. ESI-MS (M+H) +:492.1.1H NMR (400 MHz, DMSO-d6) δ 11.58 (s, 1H), 8.44 (s, 1H), 8.28 (s, 1H), 8.17 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.44 (s, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.10 (s, 3H), 4.00 (t, J = 8.6 Hz, 2H), 3.45 (s, 4H), 3.28 – 3.26 (m, 4H), 3.13 (t, J = 8.7 Hz, 2H), 2.44 (s, 3H), 1.43 (s, 9H). Step 5: Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0437] To a solution of tert-butyl 4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate formate (20 mg, 0.041 mmol) in EA (3 mL) was added 4M HCl / EA (3 mL). The mixture was stirred at r.t for 2 h. The reaction solution was concentrated in vacuo, the residue was diluted with TFA () (5 mL, 0.5 M), concentrated in vacuo and lyophilized to give title product (9.83 mg, 47%) as a white solid. ESI-MS (M+H) +:392.2.1H NMR (400 MHz, MeOD-d4) δ 8.55 – 8.51 (m, 1H), 7.83 (s, 1H), 7.78 (d, J = 6.4 Hz, 1H), 7.58 (s, 1H), 6.92 (s, 1H), 4.48 – 4.36 (m, 2H), 4.30 (s, 3H), 4.02 – 3.91 (m, 4H), 3.62 – 3.52 (m, 2H), 3.48 – 3.40 (m, 4H), 2.48 (s, 3H). Example 53 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-5-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000264_0001
Step 1: Preparation of 4-chloro-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [0438] To a solution of 4-chloro-5-methyl-1H-pyrrolo[2,3-b]pyridine (1 g, 6.02 mmol) in MeOH (20 mL) was added Raney-Ni (360 mg, 20% w.t). The mixture was stirred at 70 oC for 16 h under H2. The mixture was cooled down to r.t. The mixture was filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column (PE: EA = 1:1) to provide title product (400 mg, yield: 40%) as a white solid. ESI-MS (M+H) +:169.2.1H NMR (400 MHz, DMSO-d6) δ 7.60 (d, J = 0.5 Hz, 1H), 6.45 (s, 1H), 3.50 (t, J = 8.6 Hz, 2H), 2.99 (t, J = 8.5 Hz, 2H), 2.09 (s, 3H). Step 2: Preparation of tert-butyl 4-(5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [0439] A mixture of 4-chloro-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.79 mmol) and tert-butyl piperazine-1-carboxylate (997 mg, 5.36 mmol) was stirred at 140 oC for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (DCM: MeOH = 10:1) to provide title product (200 mg, yield: 35%) as a brown solid. ESI- MS (M+H) +:319.2.1H NMR (400 MHz, DMSO-d6) δ 7.44 (s, 1H), 5.87 (s, 1H), 3.41 – 3.37 (m, 4H), 3.24 – 3.22 (m, 2H), 3.08 (t, J = 8.4 Hz, 2H), 2.97 – 2.94 (m, 4H), 2.01 (s, 3H), 1.42 (s, 9H). Step 3: Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-5- methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0440] To a solution of tert-butyl 4-(5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (150 mg, 0.47 mmol) in THF (10 mL) were added TEA (143 mg, 1.42 mmol) and triphosgene (56 mg, 0.19 mmol) at 0 oC. Then 6-ethoxy-2-methyl-2H- indazol-5-amine (117 mg, 0.71 mmol) was added to the reaction after stirring for 1h. Then the mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:1) to provide title product (70 mg, yield: 30%) as a white solid. ESI-MS (M+H) +:510.4.1H NMR (400 MHz, CDCl3) δ 8.08 (s, 1H), 7.86 (d, J = 1.4 Hz, 1H), 7.84 (s, 1H), 7.83 (s, 1H), 4.32 (s, 3H), 3.53 – 3.51 (m, 4H), 3.49 – 3.45 (m, 4H), 3.43 – 3.41 (m, 2H), 3.36 – 3.33 (m, 2H), 2.20 (s, 3H), 1.49 (s, 9H). Step 4: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-5-methyl-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0441] To a solution of 4-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-5-methyl-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EtOAc (1 mL) was added 4M HCl / EtOAc (3 mL). The reaction mixture was stirred at room temperature for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN), 0.5 M TFA (1 mL) was added and lyophilized to give title compound (22 mg, yield: 54%) as a white solid. ESI-MS (M+H)+:410.2.1H NMR (400 MHz, DMSO-d6) δ 11.58 (s, 1H), 8.77 (s, 2H), 8.37 (d, J = 2.8 Hz, 1H), 7.93 (s, 1H), 7.72 (d, J = 1.6 Hz, 1H), 7.25 (dd, J = 13.3, 1.6 Hz, 1H), 4.17 (s, 3H), 4.03 – 4.00 (m, 2H), 3.33 – 3.28 (m, 4H), 3.26 – 3.19 (m, 6H), 2.19 (s, 3H).
Example 54 – Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000266_0001
Step 1: Preparation of tert-butyl (4-fluoropyridin-2-yl)carbamate. [0442] To a solution of 4-fluoropyridin-2-amine (18 g, 160.71 mmol) and DMAP (1.98 g, 16.07 mmol) in DCM (200 mL) was added Boc2O (42.04 g, 192.86 mmol), the mixture stirred at r.t for 2 h. The mixture was diluted with water (200 mL) and extracted with DCM (200 mLx3). The organic layer concentrated in vacuo. The crude was purified by reserve silica gel column chromatography (PE: DCM=2:1) to give title compound (30 g, y: 87.9) as a white solid. ESI-MS (M+H)+: 213.0.1H NMR (400 MHz, DMSO-d6) δ 10.14 (s, 1H), 8.27 (dd, J = 9.4, 5.7 Hz, 1H), 7.61 (dd, J = 12.3, 2.3 Hz, 1H), 6.95 (ddd, J = 8.2, 5.7, 2.4 Hz, 1H), 1.48 (s, 9H). Step 2: Preparation of tert-butyl (4-fluoro-3-methylpyridin-2-yl)carbamate. [0443] To a solution of tert-butyl (4-fluoropyridin-2-yl)carbamate (30.1 g, 141.31 mmol) in dry-THF (300 mL) was added N1,N1,N2,N2-tetramethylethane-1,2-diamine (40.98 g, 353.29 mmol) at -78℃ for 0.5 h, n-BuLi (169.6 mL, 423.94 mmol, 2.5 M) was added to the mixture and stirred at -78℃ for 0.5 h. MeI (60.2 g, 423.94 mmol) was added, the mixture stirred at - 78℃ for 0.5 h then warm to r.t and stirred at r.t for 2 h. The mixture was quenched with NH4Cl (200 mL) and extracted with EA (200 mLx3). The organic layer concentrated in vacuo to give title compound (36 g, crude) as a yellow solid. ESI-MS (M+H)+: 227.0. Step 3: Preparation of 4-fluoro-3-methylpyridin-2-amine HCl salt. [0444] A mixture of tert-butyl (4-fluoro-3-methylpyridin-2-yl)carbamate (34 g, 149.78 mmol) in EA (100 mL) and 4M HCl / EA (140 mL) was stirred at RT for 2 h. The mixture concentrated in vacuo to give title product (21 g, crude) as a yellow solid. ESI-MS (M+H) +: 126.9. Step 4: Preparation of 5-bromo-4-fluoro-3-methylpyridin-2-amine. [0445] To a mixture of 4-fluoro-3-methylpyridin-2-amine (19 g, 149.61 mmol) in DCM (300 mL) was added NBS (29.3 g, 164.57 mmol) at 0℃. The reaction solution was stirred at r.t for 2 h. The reaction concentrated in vacuo to give title product (40 g, crude) as a yellow solid. ESI-MS (M+H) +: 204.9.1H NMR (400 MHz, DMSO-d6) δ 8.40 (d, J = 7.4 Hz, 1H), 2.11 (d, J = 1.9 Hz, 3H). Step 5: Preparation of 6-bromo-7-fluoro-2,8-dimethylimidazo[1,2-a]pyridine. [0446] To a mixture of 5-bromo-4-fluoro-3-methylpyridin-2-amine (14 g, 68.31 mmol) in IPA (140 mL) were added 1-bromo-2,2-dimethoxypropane (25 g, 136.61 mmol) and PPTS (1.71 g, 6.83 mmol). The reaction solution was stirred at 95℃ for 48 h. The reaction was concentrated in vacuo the residue was diluted with water (100 mL), adjusted pH to 11 by sat. NaOH, stirred at r.t for 1h. The precipitate was filtered and purified by column chromatography (EA) to give title product (5.5 g, yield: 33.1%) as a yellow solid. ESI-MS (M+H) +: 244.9.1H NMR (400 MHz, DMSO-d6) δ 9.32 (d, J = 6.1 Hz, 1H), 8.00 (s, 1H), 2.50 (s, 3H), 2.49 (s, 3H). Step 6: Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0447] To a mixture of 6-bromo-7-fluoro-2,8-dimethylimidazo[1,2-a]pyridine (5 g, 20.58 mmol) and diphenylmethanimine (4.1 g, 22.63 mmol) in 1,4-dioxane (100 mL) were added BINAP (2.58 g, 4.12 mmol), Pd2(dba)3 (1.88 g, 2.06 mmol) and Cs2CO3 (20.06 g, 61.73 mmol). The reaction solution was stirred at 100℃ for 16 h under N2. The reaction was diluted with H2O (100 mL), extracted with EA (100 mLx3), the organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA=2:1) to give title product (2.3 g, crude) as a yellow oil. ESI-MS (M+H) +: 344.1. Step 7: Preparation of 7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-amine. [0448] A mixture of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (2.1 g, 6.10 mmol) in 4M HCl / EA (21 mL) was stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (700 mg, y: 45.2%) as a white solid. ESI-MS (M+H) +: 180.0.1H NMR (400 MHz, DMSO-d6) δ 8.02 (d, J = 7.3 Hz, 1H), 7.90 (d, J = 0.9 Hz, 1H), 2.44 (s, 3H), 2.42 (s, 3H). Step 8: Preparation of tert-butyl 4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0449] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (200 mg, 0.66 mmol) and 7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-amine (118 mg, 0.66 mmol) in THF (12 mL) were added TEA (200 mg, 1.98 mmol) and triphosgene (490 mg, 1.65 mmol) at 0oC. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (10 mL), extracted with DCM (10 mL×3). The organic layer was washed with brine, dried with Na2 SO4 and concentrated in vacuo. The crude was purified by silica gel column (EA) to give title product (90 mg, 26.9%) as a yellow solid. ESI-MS (M+H) +: 510.3. Step 9: Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0450] A mixture of tert-butyl 4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl / EA (6 mL) was stirred at RT for 2 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 %TFA in water / CH3CN) to give title product (43 mg, yield: 66.9 %) as a yellow solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, DMSO- d6) δ 12.39 (d, J = 2.2 Hz, 1H), 9.51 (d, J = 6.3 Hz, 1H), 9.14 (s, 2H), 8.13 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.63 (d, J = 6.2 Hz, 1H), 4.06 – 4.01 (m, 2H), 3.55 – 3.48 (m, 4H), 3.28 – 3.21 (m, 4H), 3.20 – 3.13 (m, 2H), 2.49 (s, 3H), 2.46 (s, 3H).
Example 55 – Preparation of N-(1-methyl-1H-indol-3-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000269_0001
Step 1: Preparation of tert-butyl 4-(1-((1-methyl-1H-indol-3-yl)carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0451] To a solution of 1-methyl-1H-indole-3-carboxylic acid (350 mg, 2.00 mmol) in toluene (5 mL) were added TEA (404 mg, 4.00 mmol) and DPPA (770 mg, 2.80 mmol). The mixture was stirred at RT for 1 h and 1 h at 90 oC. The tert-butyl 4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (304 mg, 1.00 mmol) was added to the solution and stirred at 110 oC for 4 h. The mixture was diluted with water (15 mL) and extracted with DCM (30 mL x 3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude product was purified by column chromatography on silica gel (eluted with DCM:MeOH = 30:1) to give title product (80 mg, yield: 16.81%) as a white solid. ESI-MS (M+H) +: 477.6.1H NMR (400 MHz, DMSO-d6) δ 8.42 (s, 1H), 7.57 – 7.54 (m, 2H), 7.42 (s, 1H), 7.20 – 7.17 (m, 2H), 7.08 – 7.05 (m, 2H), 4.06 – 3.96 (m, 2H), 3.76 (s, 3H), 3.47 – 3.44 (m, 4H), 3.30 – 3.27 (m, 4H), 3.20 – 3.09 (m, 2H), 1.44 (s, 9H). Step 2: Preparation of N-(1-methyl-1H-indol-3-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0452] A solution of tert-butyl 4-(1-((1-methyl-1H-indol-3-yl)carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.15 mmol) in 3.0 M HCl / EA was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (9.44 mg, yield: 16.74%) as a white solid. ESI-MS (M+H) +: 377.2.1H NMR (400 MHz, DMSO-d6) δ 11.70 (s, 1H), 8.76 (s, 2H), 8.08 (s, 1H), 7.56 (d, J = 6.1 Hz, 2H), 7.43 (d, J = 8.2 Hz, 1H), 7.23 – 7.17 (m, 1H), 7.11 – 7.05 (m, 1H), 6.62 (s, 1H), 4.06 – 4.02 (m, 2H), 3.77 (s, 3H), 3.50 – 3.48 (m, 4H), 3.23 – 3.22 (m, 4H), 3.19 – 3.13 (m, 2H). Example 56 – Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-6-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000270_0001
Step 1: Preparation of 6-methyl-1H-pyrrolo[2,3-b]pyridine 7-oxide. [0453] To a solution of 6-methyl-1H-pyrrolo[2,3-b]pyridine (3 g, 22.70 mmol) in EtOAc (30 mL) was added m-CPBA (5877 mg, 34.05 mmol) at 0 oC. Then left the mixture warm to r.t and stirred for 16 h. The mixture was concentrated and the residue was purified by silica gel column chromatography (DCM: MeOH=10:1) to give the title compound (2.98 g, yield: 89%) as a pink solid. ESI-MS (M+H) +:149.1.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 7.54 (d, J = 8.0 Hz, 1H), 7.34 (d, J = 2.7 Hz, 1H), 7.10 (d, J = 8.1 Hz, 1H), 6.52 (d, J = 3.1 Hz, 1H), 2.51 (s, 3H). Step 2: Preparation of 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine. [0454] To a solution of 6-methyl-1H-pyrrolo[2,3-b]pyridine 7-oxide (3 g, 20.27 mmol) in dry DMF (20 mL) was added MsCl (6.97 g, 60.81 mmol)) under N2. The mixture was stirred at 75 oC for 16 h. After cooling down to r.t, the mixture was diluted with water (100 mL) and extracted EtOAc (50 mL*3). The organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=5:1) to give the title compound (1.85 g, yield: 55%) as a white solid. ESI-MS (M+H) +: 169.0.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 7.46 (t, J = 2.8 Hz, 1H), 7.08 (s, 1H), 6.46 – 6.35 (m, 1H), 2.50 (s, 3H). Step 3: Preparation of 4-chloro-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [0455] To a solution of 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine (1.8 g, 10.84 mmol) in MeOH (20 mL) was added Raney-Ni (360 mg, 20% w.t). The mixture was stirred at 70 oC for 24 h under H2. The mixture was cooled down to r.t. The mixture was filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column (PE: EA = 3:1) to provide title product (500 mg, yield: 26%) as a brown solid. ESI-MS (M+H) +:169.0.1H NMR (400 MHz, DMSO-d6) δ 6.63 (s, 1H), 6.33 (s, 1H), 3.57 – 3.45 (m, 2H), 2.95 (t, J = 8.5 Hz, 2H), 2.18 (s, 3H). Step 4: Preparation of tert-butyl 4-(6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [0456] A mixture of 4-chloro-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (250 mg, 1.49 mmol) and tert-butyl piperazine-1-carboxylate (830 mg, 4.46 mmol) was stirred at 140 oC for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (DCM: MeOH = 10:1) to provide title product (240 mg, yield: 51%) as a brown solid. ESI- MS (M+H) +:319.3. Step 5: Preparation of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-6- methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0457] To a solution of tert-butyl 4-(6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (200 mg, 0.63 mmol) in THF (10 mL) were added TEA (191 mg, 1.89 mmol) and triphosgene (75 mg, 0.25 mmol) at 0 oC. Then 6-ethoxy-2-methyl-2H- indazol-5-amine (180 mg, 0.95 mmol) was added to the reaction after stirring for 1h. Then the mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:1) to provide title product (100 mg, yield: 30%) as a white solid. ESI-MS (M+H) +:536.1.1H NMR (400 MHz, DMSO-d6) δ 11.67 (s, 1H), 8.38 (s, 1H), 8.11 (d, J = 4.1 Hz, 2H), 7.91 (s, 1H), 4.29 (q, J = 6.9 Hz, 2H), 4.10 – 4.06 (m, 4H), 4.06 (s, 3H), 3.98 (t, J = 8.5 Hz, 2H), 3.25 – 3.21 (m, 4H), 3.05 (t, J = 8.3 Hz, 2H), 2.42 (s, 3H), 1.42 (s, 9H), 1.38 – 1.36 (m, 3H). Step 6: Preparation of N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-6-methyl-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0458] To a solution of 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-6-methyl-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.17 mmol) in DCM (1.5 mL) was added TFA (1.5 mL). The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (31 mg, yield: 42%) as a white solid. ESI-MS (M+H)+:436.1.1H NMR (400 MHz, DMSO-d6) δ 11.63 (s, 1H), 8.75 (s, 2H), 8.38 (s, 1H), 8.12 (s, 1H), 7.04 (s, 1H), 6.48 (s, 1H), 4.30 (q, J = 7.0 Hz, 2H), 4.06 (s, 3H), 4.04 – 3.99 (m, 2H), 3.50 – 3.40 (m, 4H), 3.22 – 3.21 (m, 4H), 3.06 (t, J = 8.4 Hz, 2H), 2.44 (s, 3H), 1.40 (t, J = 7.0 Hz, 3H). Example 57 – Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000272_0001
Step 1: Preparation of methyl 6-bromo-2-methylimidazo[1,2-a]pyridine-7-carboxylate. [0459] To a solution of methyl 2-amino-5-bromoisonicotinate (37 g, 0.16 mol) in EtOH (500 mL) was added 1-chloropropan-2-one (149 g, 1.609 mol). The mixture was stirred at 90 oC for 16 h. After cooling to RT, the mixture was concentrated under reduced pressure, then the precipitate was filtered, washed by EA. The residue was dissolved in NaOH (2 M, 150 mL) and stirred at RT for 2 h. Then extracted with EA (200 mLx3) and the organic layer was washed with saturated NaCl solution and concentrated in vacuo. The crude was purified by silica gel column (PE: EA=4:1~1:1) to give the title compound (18 g, 41.6 %) as a yellow solid. ESI-MS (M+H) +: 268.9.1H NMR (400 MHz, DMSO-d6) δ 8.95 (s, 1H), 7.98 (s, 1H), 7.81 (s, 1H), 3.87 (s, 3H), 2.38 (s, 3H). Step 2: Preparation of (6-bromo-2-methylimidazo[1,2-a]pyridin-7-yl)methanol. [0460] To a stirred solution of methyl 6-bromo-2-methylimidazo[1,2-a]pyridine-7- carboxylate (19 g, 70.9 mmol) in EtOH (250 mL) was added NaBH4 (8.3 g, 212.7 mmol) and the mixture was stirred at r.t for 4 h. After diluting with water (40 mL), the solid was collected by filtration and washed with water (20 mL*3) to give title product (14 g, 82.4 %) as a white solid. ESI-MS (M+H)+: 241.0.1H NMR (400 MHz, DMSO-d6) δ 8.80 (s, 1H), 7.61 (s, 1H), 7.46 (s, 1H), 4.50 (s, 2H), 2.32 (s, 3H). Step 3: Preparation of 6-bromo-2-methylimidazo[1,2-a]pyridine-7-carbaldehyde. [0461] To a solution of (6-bromo-2-methylimidazo[1,2-a]pyridin-7-yl)methanol (14.5 g, 0.06 mol) in DCM (200 mL) was added MnO2 (26.3 g, 0.302 mmol), the mixture was stirred at 45 oC for 16 h. Then the mixture was filtered through a celite pad, and the filtrate was concentrated to give the crude product (12 g, crude) as a white solid. ESI-MS (M+H)+: 238.9. 1H NMR (400 MHz, DMSO-d6) δ 10.10 (s, 1H), 8.98 (s, 1H), 8.03 (s, 1H), 7.90 (s, 1H), 2.41 (s, 3H). Step 4: Preparation of 6-bromo-7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridine. [0462] To a solution of 6-bromo-2-methylimidazo[1,2-a]pyridine-7-carbaldehyde (12 g, 0.05 mol) in DCM (150 mL) was added Bast (27.7 g,0.126 mol). The mixture was stirred at r.t for 4 h. The mixture was adjusted to pH≈8 with aq.NaHCO3.Then the solution was extracted with DCM (100 mLx3) and the organic layer was concentrated in vacuo. The crude was purified by silica gel column (PE: EA=2:1~1:1) to give the title compound (3.2 g, 24.4 %) as a brown solid. ESI-MS (M+H) +: 260.7.1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 1H), 7.78 (d, J = 5.0 Hz, 2H), 7.12 (t, J = 54.1 Hz, 1H), 2.37 (s, 3H). Step 5: Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0463] A mixture of 6-bromo-7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridine (3.2 g, 12.31 mmol), diphenylmethanimine (3.3 g, 18.46 mmol), Pd(OAc)2 (276 mg, 1.23 mmol), BINAP (1.5 g, 2.46 mmol) and Cs2CO3 (12 g, 36.92 mmol) in 1,4-dioxane (50 mL) was purged with N2 for three times. Then the reaction mixture was stirred at 100 oC for 16 h. After cooling to r.t, the mixture was concentrated to dryness. The crude was purified by silica gel column (PE: EA=1:1) to give the title product (3.5 g, 76.4 %) as a brown solid. ESI-MS: [M+H] + 362.0.1H NMR (400 MHz, DMSO-d6) δ 7.74 – 7.70 (m, 2H), 7.68 (s, 1H), 7.62 (s, 1H), 7.59 – 7.55 (m, 1H), 7.52 – 7.47 (m, 3H), 7.40 – 7.33 (m, 3H), 7.25 – 7.22 (m, 2H), 2.26 (s, 3H). Step 6: Preparation of 4-fluoro-2-methylbenzo[d]oxazol-6-amine. [0464] A mixture of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (3 g, 8.31 mmol) in HCl / EA (4 M, 30 mL) was stirred at r.t for 16 h. The mixture was adjusted to pH≈9 with aq.NaHCO3. The mixture was extracted with EA (50 mL x 2). The combined organics was concentrated. The crude was purified by silica gel column (PE: EA=1:1~1:7) to give the title compound (1 g, 61.1%) as yellow solid. ESI-MS: [M+H] + 198.1H NMR (400 MHz, DMSO-d6) δ 7.84 (s, 1H), 7.61 (s, 1H), 7.47 (s, 1H), 7.08 (t, J = 54.6 Hz, 1H), 4.77 (s, 2H), 2.28 (s, 3H). Step 7: Preparation of tert-butyl 4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0465] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (200 mg, 0.66 mmol) and 7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- amine (130 mg, 0.66 mmol) in THF (12 mL) were added TEA (199 mg, 1.98 mmol) and triphosgene (487 mg, 1.64 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 1: 4) to give title product (120 mg, 34.7%) as a white solid. ESI-MS (M+H) +: 528.4. Step 8: Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0466] A mixture of ttert-butyl 4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.189 mmol) in 4M HCl / EA (10 mL) was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (80 mg, 98.8 %) as a white solid. ESI-MS (M+H) +: 428.2.1H NMR (400 MHz, DMSO-d6) δ 12.30 (s, 1H), 9.62 (s, 1H), 9.12 (s, 2H), 8.26 (s, 1H), 8.16 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.38 (t, J = 53.5 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 4.11 – 4.00 (m, 2H), 3.58 – 3.48 (m, 4H), 3.28 – 3.13 (m, 6H), 2.50 (s, 3H). Example 58 – Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000275_0001
Step 1: Preparation of tert-butyl 7-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0467] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.60 mmol) and 7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-amine (109 mg, 0.60 mmol) in THF (10 mL) were added TEA (182 mg, 1.80 mmol) and triphosgene (449 mg, 1.51 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2 SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 1: 5) to give title product (90 mg, 27.8%) as a white solid. ESI-MS (M+H) +: 536.0.1H NMR (400 MHz, DMSO-d6) δ 12.04 (d, J = 2.2 Hz, 1H), 9.12 (d, J = 7.1 Hz, 1H), 7.94 (d, J = 6.1 Hz, 1H), 7.75 (s, 1H), 6.59 (d, J = 6.2 Hz, 1H), 3.67 – 3.57 (m, 2H), 3.37 – 3.30 (m, 4H), 3.21 – 3.13 (m, 4H), 2.44 (d, J = 1.8 Hz, 3H), 2.35 (s, 3H), 1.48 (s, 9H), 1.03 – 0.97 (m, 2H), 0.93 – 0.88 (m, 2H). Step 2: Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0468] A mixture of tert-butyl 7-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (90 mg, 0.17 mmol) in 4M HCl / EA (6 mL) was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (61 mg, 83.3 %) as a white solid. ESI-MS (M+H) +: 436.2.1H NMR (400 MHz, DMSO-d6) δ 12.42 (d, J = 2.1 Hz, 1H), 9.54 (d, J = 6.3 Hz, 1H), 9.43 (s, 2H), 8.15 (d, J = 0.9 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.64 (d, J = 6.2 Hz, 1H), 4.05 – 4.01 (m, 2H), 3.64 – 3.55 (m, 2H), 3.48 – 3.42 (m, 2H), 3.40 – 3.32 (m, 2H), 3.22 – 3.12 (m, 2H), 2.49 (s, 3H), 2.47 (d, J = 0.8 Hz, 3H), 1.11 – 0.89 (m, 4H). Example 59 – Preparation of N-(4-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000276_0001
Step 1: Preparation of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine. [0469] To a solution of 5-bromo-4-methoxy-2-methyl-2H-indazole (3 g,12.45 mmol) in 1,4- dioxane (50 mL) were added diphenylmethanimine (2.4 g,13.07 mmol), Cs2CO3 (8.1 g, 24.90 mmol), Pd(OAc)2 (280 mg, 1.25 mmol), BINAP (1.55 g,2.49 mmol). The mixture was stirred at 115 ℃ for 16 h. The reaction mixture was diluted with water (50 mL) and extracted with EA (50 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (2 g, yield: 46 %) as a yellow solid. ESI-MS (M+H) +:342.1.1H NMR (400 MHz, DMSO-d6) δ 8.34 (s, 1H), 7.70 – 7.64 (m, 2H), 7.53 (dd, J = 8.4, 6.2 Hz, 1H), 7.46 (t, J = 7.3 Hz, 2H), 7.30 – 7.23 (m, 3H), 7.18 – 7.10 (m, 2H), 7.03 (dd, J = 8.9, 0.6 Hz, 1H), 6.62 (d, J = 8.9 Hz, 1H), 4.06 (s, 3H), 3.83 (s, 3H). Step 2: Preparation of 4-methoxy-2-methyl-2H-indazol-5-amine. [0470] A solution of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (1.8 g, 5.26 mmol) in 3M HCl / EA (20 mL) was stirred at r.t for 3 h. The mixture was concentrated in vacuo, the residue was dissolved in water (10 mL), adjusted pH=10 by sat. Na2CO3. Then extracted with EA (30 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH=10:1) to give title product (450 mg, yield: 48 %) as a yellow solid. ESI-MS (M+H) +:178.1.1H NMR (400 MHz, DMSO-d6) δ 8.13 (s, 1H), 7.09 (dd, J = 8.9, 0.8 Hz, 1H), 6.83 (d, J = 8.9 Hz, 1H), 4.41 (s, 2H), 4.06 (s, 3H), 3.84 (s, 3H). Step 3: Preparation of tert-butyl 4-(1-((4-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0471] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (90 mg, 0.30 mmol) in THF (5 mL) were added 4-methoxy-2-methyl-2H- indazol-5-amine (158 mg, 0.90 mmol), TEA (152 mg, 1.50 mmol) and triphosgene (178 mg, 0.60 mmol) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE= 2:1) to give title product (60 mg, yield: 39 %) as a white solid. ESI-MS (M+H) +:508.3.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 8.52 (s, 1H), 8.12 (d, J = 9.3 Hz, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.26 (d, J = 9.2 Hz, 1H), 6.60 – 6.43 (m, 1H), 4.14 (s, 3H), 4.05 (s, 3H), 4.01 – 3.98 (m, 2H), 3.47 – 3.42 (m, 4H), 3.29 – 3.25 (m, 4H), 3.15 – 3.09 (m, 2H), 1.43 (s, 9H). Step 4: Preparation of N-(4-hydroxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0472] A mixture of tert-butyl 4-(1-((4-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (20 mg, 0.039 mmol) in BBr3 (3 mL, 1.0 M in DCM) was stirred at r.t for 3 h. The mixture was quenched with MeOH (3 mL) at 0oC and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (9.2 mg, 59 %) as a white solid. ESI-MS (M+H) +:394.1.1H NMR (400 MHz, MeOD-d4) δ 8.24 – 8.20 (m, 1H), 7.92 (s, 1H), 7.26 (d, J = 8.9 Hz, 1H), 7.10 (d, J = 9.0 Hz, 1H), 6.73 (s, 1H), 4.28 – 4.20 (m, 2H), 4.18 (s, 3H), 3.72 – 3.67 (m, 2H), 3.42 – 3.39 (m, 4H), 3.32 – 3.31 (m, 4H). Example 60 – Preparation of N-(1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000278_0001
Step 1: Preparation of tert-butyl 4-(1-((1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0473] To a mixture of 1-methyl-1H-pyrrolo[2,3-b]pyridine-3-carboxylic acid (250 mg, 0.82 mmol) in toluene (5 mL) were added DPPA (623 mg, 2.30 mmol) and TEA (332 mg, 3.29 mmol). The mixture was stirred at r.t for 1 h and warmed up to 90oC and stirred for 1 h. tert- butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (289 mg, 1.64 mmol) was added to the mixture and stirred at 110oC for 4 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3), the organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 2) to get title product (200 mg, Y: 51.0%) as a white solid. ESI-MS (M+H)+:478.2.1H NMR (400 MHz, DMSO-d6) δ 11.78 (s, 1H), 8.30 (d, J = 3.4 Hz, 1H), 8.02 (d, J = 6.0 Hz, 1H), 7.97 (d, J = 7.1 Hz, 1H), 7.70 (s, 1H), 7.23 (d, J = 8.2 Hz, 1H), 6.55 (d, J = 6.0 Hz, 1H), 4.01 (t, J = 8.4 Hz, 2H), 3.80 (s, 3H), 3.47 – 3.43 (m, 4H), 3.31 – 3.27 (m, 4H), 3.17 – 3.13 (m, 2H), 1.43 (s, 9H). Step 2: Preparation of N-(1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0474] To a solution of tert-butyl 4-(1-((1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (200 mg, 0.42 mmol) in EA (4 mL) was added 4 M HCl/EA (5 mL). The mixture was stirred at rt for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title product (166 mg, Y: 80.7%) as a yellow solid. ESI-MS (M+H)+:378.1.1H NMR (400 MHz, MeOD-d4) δ 8.33 (d, J = 4.1 Hz, 1H), 8.23 (d, J = 7.9 Hz, 1H), 7.88 (d, J = 6.8 Hz, 1H), 7.63 (s, 1H), 7.24 (dd, J = 7.9, 5.0 Hz, 1H), 6.82 (d, J = 7.0 Hz, 1H), 4.33 (t, J = 8.5 Hz, 2H), 3.90 (s, 3H), 3.87 – 3.78 (m, 4H), 3.47 – 3.39 (m, 6H). Example 61 – Preparation of 4-(piperazin-1-yl)-N-(6-(trifluoromethyl)-2H-indazol-5-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000279_0001
Figure imgf000279_0003
Figure imgf000279_0002
Step 1: Preparation of 4-bromo-2-methyl-5-(trifluoromethyl)aniline. [0475] A mixture of 2-methyl-5-(trifluoromethyl)aniline (33 g, 188.57 mmol) in ACN (400 mL) was added NBS (33.6 g, 188.57 mmol) at 0oC. The mixture was stirred at r.t for 2 h. The mixture was diluted with water (1000 mL) and extracted with EA (1000 mL x 3). The organic phase was dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (PE: EA=5:1) to afford title product (31.6 g, 65.5%) as a brown oil. ESI-MS (M+H)+: 295.0.1H NMR (400 MHz, DMSO-d6) δ 7.35 (s, 1H), 7.05 (s, 1H), 5.50 (s, 2H), 2.10 (s, 3H). Step 2: Preparation of 5-bromo-6-(trifluoromethyl)-1H-indazole. [0476] To a solution of 4-bromo-2-methyl-5-(trifluoromethyl)aniline (30 g, 118.5 mmol) in water (300 mL) was added acetic acid (7.11 g, 118.5 mmol) and sodium nitrite (8.18 g, 118.5 mmol) at 0oC. Then the mixture was stirred at r.t overnight. The mixture was diluted with water (300 mL), the precipitate was filtered to provide title product (29 g, yield: 92.6%) as a yellow solid. ESI-MS (M+H)+: 265.0. Step 3: Preparation of 5-bromo-2-methyl-6-(trifluoromethyl)-2H-indazole. [0477] To a solution of 5-bromo-6-(trifluoromethyl)-1H-indazole (6 g, 22.84 mmol) in THF (1.5 mL) was added trimethyloxonium tetrafluoroborate (4.35 g, 29.43 mmol). Then the mixture was stirred at r.t for 2 hours. The mixture was diluted with H2O (70 mL) and extracted with EA (70 mL x 3). The organic phase was dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (PE: EA=1:1) to afford title product (3.3 g, 52.3%) as yellow solid. ESI-MS (M+H)+: 279.1. Step 4: Preparation of N-(2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine. [0478] To a solution of 5-bromo-2-methyl-6-(trifluoromethyl)-2H-indazole (2 g, 7.17 mmol) in 1,4-dioxane (20 mL) were added diphenylmethanimine (1.95 g, 10.75 mmol), Cs2CO3 (7.01 g, 21.5 mmol), Pd(OAc)2 (161 mg, 0.71 mmol) and BIANP (893 mg, 1.43 mmol). Then the mixture was stirred at 100oC for 16 hours under N2. The mixture was diluted with H2O (50 mL) and extracted with EA (50 mL x 3). The organic phase was dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (PE: EA=1:1) to afford title product (2.7 g, 99.2%) as yellow solid. ESI-MS (M+H)+: 380.2. Step 5: Preparation of 2-methyl-6-(trifluoromethyl)-2H-indazol-5-amine HCl salt. [0479] To a solution of N-(2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine (2.7 g, 7.12 mmol) in EA (50 mL) was added 3 M HCl / EA (50 mL) at 0oC. Then the mixture was stirred at r.t for 2 hours. The precipitate was filtered and dried to provide title product (1.5 g, yield: 98.6%) as a yellow solid. ESI-MS (M+H)+: 216.2. Step 6: Preparation of N-(2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)-1,1- diphenylmethanimine. [0480] To a solution of 2-methyl-6-(trifluoromethyl)-2H-indazol-5-amine (200 mg, 0.93 mmol) in DCM (8 mL) were added py (221 mg, 10.75 mmol) and phenyl carbonochloridate (893 mg, 1.43 mmol) at 0oC. Then the mixture was stirred at r.t for 1 hours. The mixture was diluted with H2O (30 mL) and extracted with DCM (30 mL x 3). The mixture was filtered and concentrated to provide title product (300 mg, yield: 96.4%) as a yellow solid. ESI-MS (M+H)+: 336.1 Step 7: Preparation of tert-butyl 4-(1-((2-methyl-6-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0481] To a solution of phenyl (2-methyl-6-(trifluoromethyl)-2H-indazol-5-yl)carbamate (300 mg, 1.39 mmol) in THF (8 mL) were added tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate (509 mg, 1.67 mmol) and TEA (423 mg, 4.17 mmol) at 0oC. Then the mixture was stirred at r.t for 16 hours. The mixture was diluted with H2O (30 mL) and extracted with EA (30 mL x 3). The organic phase was dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (PE: EA=1:1) to afford title product (140 mg, 57.3%) as yellow solid. ESI-MS (M+H)+: 546.3. Step 8: Preparation of 4-(piperazin-1-yl)-N-(6-(trifluoromethyl)-2H-indazol-5-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0482] To a solution of tert-butyl 4-(1-((2-methyl-6-(trifluoromethyl)-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (140 mg, 0.26 mmol) in EA (2 mL) was added 4M HCl / EA(4 mL) at 0oC. Then the mixture was stirred at r.t for 2 hours. The precipitate was filtered, washed with EtOAc and purified by prep-HPLC (0.05% TFA in water / CH3CN) to afford title product (100.9 mg, yield: 88.5%) as an off-white solid. ESI-MS (M+H)+: 446.2.1H NMR (400 MHz, MeOD-d4) δ 8.41 (s, 1H), 8.08 (s, 1H), 7.90 (s, 1H), 7.77 (d, J = 7.3 Hz, 1H), 6.91 (d, J = 7.4 Hz, 1H), 4.37 (t, J = 8.5 Hz, 2H), 4.30 (s, 3H), 4.01 – 3.91 (m, 4H), 3.56 (t, J = 8.5 Hz, 2H), 3.48 – 3.41 (m, 4H). Example 62 – Preparation of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000281_0001
Step 1: Preparation of N-(4-methoxy-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0483] To a solution of tert-butyl 4-(1-((4-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (20 mg, 0.039 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (10.43 mg, 65%) as a colorless oil. ESI-MS (M+H) +:408.1.1H NMR (400 MHz, MeOD-d4) δ 8.45 (s, 1H), 7.84 – 7.75 (m, 2H), 7.27 (d, J = 9.1 Hz, 1H), 6.73 (d, J = 6.0 Hz, 1H), 4.22 – 4.18 ( m, 5H), 4.14 (s, 3H), 3.72 – 3.70 (m, 4H), 3.44 – 3.36 (m, 4H), 3.29 – 3.25 (m, 2H). Example 63 – Preparation of N-(3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. PMB
Figure imgf000282_0001
Step 1: Preparation of 2-chloro-N,N-bis(4-methoxybenzyl)-3-nitropyridin-4-amine. [0484] To a mixture of 2,4-dichloro-3-nitropyridine (9.3 g, 48.19 mmol) in DMF (62 mL) were added TEA (7.3 g, 72.29 mmol) and NH(PMB)2 (12.4 g, 48.19 mmol) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (100 mLx3). The combined organic layer was washed with brine (100 mL x3), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=10:1) to give title product (8.8 g, yield: 44 %) as a yellow oil. ESI-MS (M+H) +:414.1.1H NMR (400 MHz, MeOD-d4) δ 8.01 (d, J = 6.1 Hz, 1H), 7.11 (d, J = 8.6 Hz, 4H), 7.03 (d, J = 6.1 Hz, 1H), 6.90 – 6.85 (m, 4H), 4.35 (s, 4H), 3.76 (s, 6H). Step 2: Preparation of N4,N4-bis(4-methoxybenzyl)-N2-methyl-3-nitropyridine-2,4-diamine. [0485] To a solution of 2-chloro-N,N-bis(4-methoxybenzyl)-3-nitropyridin-4-amine (8.8 g, 21.25 mmol) in EtOH (62 mL) were added methanamine (40% in H2O) (11.53 g, 148.75 mmol). The reaction mixture was stirred at 80℃ for 16 h in a sealed tube. The reaction was concentrated to give title product (11 g, crude) as a yellow oil. ESI-MS (M+H) +:409.0.1H NMR (400 MHz, DMSO-d6) δ 7.84 (s, 1H), 7.49 (d, J = 4.6 Hz, 1H), 7.13 (d, J = 8.6 Hz, 4H), 6.87 (d, J = 8.7 Hz, 4H), 6.35 (d, J = 6.0 Hz, 1H), 4.23 (s, 3 H), 3.72 (s, 4H), 2.34 (s, 6H). Step 3: Preparation of N4,N4-bis(4-methoxybenzyl)-N2-methylpyridine-2,3,4-triamine. [0486] To a mixture of N4,N4-bis(4-methoxybenzyl)-N2-methyl-3-nitropyridine-2,4-diamine (11 g, 26.89 mmol) in MeOH (150 mL) was added Pd /C (1.1 g, 10% w.t). The mixture was charged with H2 for three times and stirred at r.t for 2 h. The mixture was filtered and the filtrate concentration to afford title product (7.2 g, Y=70%) as a yellow oil. ESI-MS (M+H)+ 379.3.1H NMR (400 MHz, DMSO-d6) δ 7.77 (s, 1H), 7.24 (d, J = 5.6 Hz, 1H), 7.17 (d, J = 8.6 Hz, 4H), 6.82 (d, J = 8.6 Hz, 4H), 6.22 (d, J = 5.7 Hz, 1H), 3.94 (s, 4H), 3.70 (s, 6H), 3.17 (s, 3H). Step 4: Preparation of N,N-bis(4-methoxybenzyl)-3-methyl-3H-imidazo[4,5-b]pyridin-7- amine. [0487] A mixture of N4,N4-bis(4-methoxybenzyl)-N2-methylpyridine-2,3,4-triamine (7.2 g, 18.99 mmol) in trimethoxymethane (100 mL) was stirred at 100℃ for 3 h. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (100 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (6.5 g, yield: 87 %) as a white solid. ESI-MS (M+H) +:389.6.1H NMR (400 MHz, DMSO-d6) δ 8.11 (s, 1H), 7.86 (d, J = 5.8 Hz, 1H), 7.18 (d, J = 8.6 Hz, 4H), 6.86 (d, J = 8.7 Hz, 4H), 6.29 (d, J = 5.8 Hz, 1H), 5.04 (s, 4H), 3.75 (s, 3H), 3.71 (s, 6H). Step 5: Preparation of 3-methyl-3H-imidazo[4,5-b]pyridin-7-amine. [0488] A mixture of N,N-bis(4-methoxybenzyl)-3-methyl-3H-imidazo[4,5-b]pyridin-7-amine (6.5 g, 16.70 mmol) in TFA (100 mL) was stirred at 70℃ for 3 h. The mixture was concentrated in vacuo, the residue was dissolved in water (30 mL), adjusted pH=10 by sat. Na2CO3. Then extracted with EA (50 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo to give title product (1.3 g, 52%) as a green solid. ESI-MS (M+H) +:149.1.1H NMR (400 MHz, DMSO-d6) δ 8.08 (s, 1H), 7.89 (d, J = 5.4 Hz, 1H), 6.39 (dd, J = 17.0, 13.9 Hz, 3H), 3.78 (s, 3H). Step 6: Preparation of phenyl (3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)carbamate. [0489] To a solution of 3-methyl-3H-imidazo[4,5-b]pyridin-7-amine (150 mg, 1.01 mmol) in DCM (5 mL) were added phenyl carbonochloridate (190 mg, 1.22 mmol) and Pyridine (239 mg, 3.03 mmol) at 0℃. The mixture was stirred at r.t for 3 h. The reaction mixture was diluted with water (10 mL) and extracted with DCM (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=2:1) to give title product (150 mg, yield: 55 %) as a white solid. ESI-MS (M+H) +:270.0. Step 7: Preparation of tert-butyl 4-(1-((3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0490] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) in THF (5 mL) were added phenyl (3-methyl-3H- imidazo[4,5-b]pyridin-7-yl)carbamate (89 mg, 0.33 mmol) and TEA (100 mg, 0.99 mmol). The reaction mixture was stirred at 70℃ for 16 h in a sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (60 mg, yield: 37 %) as a white solid. ESI-MS (M+H) +:479.4.1H NMR (400 MHz, DMSO-d6) δ 12.74 (s, 1H), 8.32 (s, 1H), 8.23 (d, J = 5.5 Hz, 1H), 8.07 (d, J = 5.5 Hz, 1H), 7.98 (d, J = 6.1 Hz, 1H), 6.56 (d, J = 6.1 Hz, 1H), 4.08 – 4.01 (m, 2H), 3.83 (s, 3H), 3.48 – 3.42 (m, 4H), 3.31 – 3.27 (m, 4H), 3.20 – 3.14 (m, 2H), 1.43 (s, 9H). Step 8: Preparation of N-(3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0491] To a solution of tert-butyl 4-(1-((3-methyl-3H-imidazo[4,5-b]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (30 mg, 60%) as a white solid. ESI-MS (M+H) +:379.0.1H NMR (400 MHz, MeOD-d4) δ 8.47 (s, 1H), 8.34 (d, J = 5.8 Hz, 1H), 8.16 (dd, J = 15.0, 6.0 Hz, 2H), 6.69 (d, J = 6.1 Hz, 1H), 4.21 (t, J = 8.5 Hz, 2H), 3.98 (s, 3H), 3.63 – 3.56 (m, 4H), 3.41 – 3.37 (m, 4H), 3.27 – 3.22 (m, 2H). Example 64 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(2,6- diazaspiro[3.3]heptan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000285_0001
Step 1: Preparation of tert-butyl 6-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- diazaspiro[3.3]heptane-2-carboxylate. [0492] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (587 mg, 3.79 mmol) and tert-butyl 2,6-diazaspiro[3.3]heptane-2-carboxylate (500 mg, 2.53 mmol) in DIEA (3 mL) was stirred at 140oC for 16 h in a sealed tube. The mixture was concentrated in vacuo and purified by silica gel column (DCM: MeOH = 15: 1) to give title product (250 mg, Y: 31.2%) as a yellow oil. ESI-MS (M+H) +: 317.1. Step 2: Preparation of tert-butyl 6-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-diazaspiro[3.3]heptane-2-carboxylate. [0493] A mixture of tert-butyl 6-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- diazaspiro[3.3]heptane-2-carboxylate (200 mg, 0.59 mmol) and phenyl (7-fluoro-2-methyl- 2H-indazol-5-yl)carbamate (340 mg, 1.19 mmol) in THF (10 mL) was added TEA (179 mg, 1.77 mmol). The mixture was stirred at 70oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 4) to give title product (120 mg, Y: 39.8%) as a white solid. ESI-MS (M+H) +: 508.3.1H NMR (400 MHz, CDCl3) δ 11.68 (s, 1H), 7.74 (d, J = 5.9 Hz, 1H), 7.42 (s, 1H), 7.01 – 6.95 (m, 1H), 6.82 (s, 1H), 6.72 (d, J = 13.5 Hz, 1H), 4.13 – 4.12 (m, 4H), 4.04 (s, 3H), 3.66 – 3.60 (m, 4H), 3.53 – 3.46 (m, 2H), 3.06 – 2.95 (m, 2H), 1.36 (s, 9H). Step 3: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(2,6-diazaspiro[3.3]heptan- 2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0494] A mixture of ttert-butyl 6-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-diazaspiro[3.3]heptane-2-carboxylate (110 mg, 0.22 mmol) in DCM (6 mL) and TFA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (46 mg, Y: 52.1%) as a white solid. ESI-MS (M+H) +: 408.1.1H NMR (400 MHz, DMSO-d6) δ 8.58 (s, 2H), 8.38 (s, 1H), 7.78 (s, 1H), 7.69 (d, J = 1.3 Hz, 1H), 7.25 (d, J = 13.3 Hz, 1H), 6.13 (s, 1H), 4.56 – 4.22 (m, 6H), 4.20 – 4.18 (m, 2H), 4.17 (s, 3H), 4.16 – 4.14 (m, 2H), 3.24 – 3.05 (m, 2H). Example 65 – Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000286_0001
[0495] To a solution of 5-fluoro-2-methylaniline (1 g, 8.00 mmol) in ACN (10 mL) was added NCS (1117 mg, 8.40 mmol). The resulting mixture was stirred at 80 o C for 2 h. The mixture was diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE/EA=4:1) to give title product (900 mg, Y: 70 %) as a brown solid. ESI-MS (M+H) +:160.1.1H NMR (400 MHz, DMSO-d6) δ 7.03 (d, J = 8.4 Hz, 1H), 6.52 (d, J = 11.9 Hz, 1H), 5.30 (s, 2H), 2.00 (s, 3H). Step 2: Preparation of 2-bromo-4-chloro-3-fluoro-6-methylaniline. [0496] To a solution of 4-chloro-5-fluoro-2-methylaniline (800 mg, 5.00 mmol) in ACN (10 mL) was added NBS (889 mg, 5.00 mmol). The resulting mixture was stirred at 0 o C for 2 h. The mixture was diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE/EA=4:1) to give title product (1 g, Y: 83 %) as a white solid. ESI-MS (M+H) +:239.9.1H NMR (400 MHz, DMSO-d6) δ 7.16 (d, J = 8.2 Hz, 1H), 2.12 (s, 3H). Step 3: Preparation of 7-bromo-5-chloro-6-fluoro-1H-indazole. [0497] To a solution of 2-bromo-4-chloro-3-fluoro-6-methylaniline (1 g, 4.20 mmol) in AcOH (10 mL) was added NaNO2 (290 mg, 4.20 mmol) in H2O (3 mL). The resulting mixture was stirred at RT for 17 h. The mixture was pour into ice-water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE/EA=2:1) to give title product (547 mg, Y: 52 %) as a brown solid. ESI-MS (M+H) +:248.9. 1H NMR (400 MHz, DMSO-d6) δ 13.83 (s, 1H), 8.24 (s, 1H), 8.09 (d, J = 6.7 Hz, 1H). Step 4: Preparation of 7-bromo-5-chloro-6-fluoro-2-methyl-2H-indazole. [0498] To a solution of 7-bromo-5-chloro-6-fluoro-1H-indazole (447 mg, 1.80 mmol) in EA (5 mL) was added trimethyloxonium tetrafluoroborate (320 mg, 2.16 mmol). The resulting mixture was stirred at RT for 2 h. The mixture was diluted with water (5 mL), extracted with EA (5 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (500 mg, crude) as a brown solid. ESI-MS (M+H+41) +: 264.9. 1H NMR (400 MHz, DMSO-d6) δ 8.56 (s, 1H), 8.06 (d, J = 7.0 Hz, 1H), 4.21 (s, 3H). Step 5: Preparation of 5-chloro-6-fluoro-2,7-dimethyl-2H-indazole. [0499] To a solution of 7-bromo-5-chloro-6-fluoro-2-methyl-2H-indazole (450 mg, 1.17 mmol) and 2,4,6-trimethyl-1,3,5,2,4,6-trioxatriborinane (432 mg, 3.42 mmol) in 1,4-dioxane / H2O (10 mL, 5:1) were added Pd(dppf)Cl2 (125 mg, 0.17 mmol) and K2CO3 (708 mg, 5.13 mmol). The resulting mixture was stirred at 80 o C under N2 (balloon) for 16 h. The mixture was allowed to cooling down to room temperature and concentrated in vacuo. The mixture was diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE/EA=1:1) to give title product (197 mg, Y: 84%) as a white solid. ESI- MS (M+H+):199.1.1H NMR (400 MHz, DMSO-d6) δ 8.31 (s, 1H), 7.76 (d, J = 7.2 Hz, 1H), 4.11 (s, 3H), 2.39 (d, J = 2.2 Hz, 3H). Step 6: Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine. [0500] To a solution of 5-chloro-6-fluoro-2,7-dimethyl-2H-indazole (880 mg, 4.44 mmol) and diphenylmethanimine (1207 mg, 6.67 mmol) in 1,4-dioxane (10 mL) were added BINAP (555 mg, 0.88 mmol), Pd(OAc)2 (99 mg, 0.44 mmol) and Cs2CO3 (4329 mg, 13.32 mmol). The reaction solution was stirred at 120℃ for 16 h under N2. The reaction was diluted with H2O (10 mL), extracted with EA (10 mLx3), the organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by reserve silica gel column chromatography (PE: EA=2:1) to give title product (1.1 g, yield: 73%) as a green solid. ESI- MS (M+H) +: 344.2. Step 7: Preparation of 6-fluoro-2,7-dimethyl-2H-indazol-5-amine HCl salt. [0501] To a solution of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-1,1- diphenylmethanimine (1 g, 2.92 mmol) in EA (5 mL) was added 4M HCl/EA (10 mL). The reaction solution was stirred at RT for 2 h. The mixture was filtered, washed with EA (20 mL) and the filtrate cake was concentrated in vacuo and diluted with EA (20 mL). The reaction solution was stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (600 g, y: 97%) as a white solid. ESI-MS (M+H) +: 180.1.1H NMR (400 MHz, DMSO-d6) δ 8.47 (s, 1H), 7.84 – 7.76 (m, 1H), 4.18 (s, 3H), 2.45 (d, J = 1.9 Hz, 3H). Step 8: Preparation of tert-butyl 7-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-4,7-diazaspiro [2.5] octane-4-carboxylate. [0502] To a solution of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-4,7- diazaspiro [2.5] octane-4-carboxylate (200 mg, 0.61 mmol) in THF (4 mL) were added TEA (185 mg, 1.83 mmol) and triphosgene (217 mg, 0.73 mmol) at 0oC for 0.5 h.6-fluoro-2,7- dimethyl-2H-indazol-5-amine (131 mg, 0.73 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2 SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 0: 1) to give title product (60 mg, 18%) as a yellow solid. ESI-MS (M+H) +: 536.3.1H NMR (400 MHz, DMSO-d6) δ 12.00 (d, J = 3.0 Hz, 1H), 8.28 (d, J = 6.2 Hz, 2H), 7.90 (d, J = 6.0 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 4.04 – 3.97 (m, 2H), 3.59 – 3.56 (m, 2H), 3.31 – 3.28 (m, 2H), 3.14 – 3.09 (m, 4H), 2.44 (d, J = 1.7 Hz, 3H), 1.43 (s, 9H), 0.97 – 0.92 (m, 2H), 0.89 – 0.83 (m, 3H). Step 9: Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(4,7-diazaspiro [2.5] octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0503] To a solution of tert-butyl 7-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-4,7-diazaspiro [2.5] octane-4-carboxylate (50 mg, 0.09 mmol) in EA (1 mL) was added 4M HCl / EA (1 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (34.95 mg, yield: 71 %) as a white solid. ESI- MS (M+H) +: 436.2.1H NMR (400 MHz, DMSO-d6) δ 11.87 (s, 1H), 9.28 (s, 2H), 8.27 (s, 1H), 8.24 (d, J = 6.5 Hz, 1H), 7.95 (d, J = 6.1 Hz, 1H), 6.61 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 4.03 (t, J = 8.5 Hz, 2H), 3.63 – 3.54 (m, 2H), 3.43 (s, 2H), 3.40 – 3.33 (m, 2H), 3.14 (t, J = 8.4 Hz, 2H), 2.43 (d, J = 1.8 Hz, 3H), 1.05 (t, J = 6.2 Hz, 2H), 0.95 (t, J = 6.4 Hz, 2H). Example 66 – Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000289_0001
Step 1: Preparation of tert-butyl 4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5-yl) carbamoyl) - 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [0504] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine- 1-carboxylate (200 mg, 0.66 mmol) in THF (4 mL) were added TEA (200 mg, 1.98 mmol) and triphosgene (235 mg, 0.79 mmol) at 0oC for 0.5 h.6-fluoro-2,7-dimethyl-2H-indazol-5- amine (142 mg, 0.79 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (3 mL), extracted with EA (3 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA =0: 1) to give title product (93 mg, 27%) as a yellow solid. ESI-MS (M+H) +: 510.0.1H NMR (400 MHz, DMSO-d6) δ 11.99 (d, J = 3.0 Hz, 1H), 8.30 – 8.24 (m, 2H), 7.92 (d, J = 6.1 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 4.03 – 3.99 (m, 2H), 3.46 – 3.44 (m, 4H), 3.30 – 3.28 (m, 4H), 3.16 – 3.12 (m, 2H), 2.44 (d, J = 1.7 Hz, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0505] To a solution of tert-butyl 4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (80 mg, 0.16 mmol) in EA (1 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (2 mL), extracted with EA (2 mL×3). The aqueous layer was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (25.03 mg, yield: 30 %) as a white solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, DMSO-d6) δ 11.69 (s, 1H), 9.04 (s, 2H), 8.28 (s, 1H), 8.21 (s, 1H), 7.94 (d, J = 6.1 Hz, 1H), 6.63 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 4.05 (t, J = 8.4 Hz, 2H), 3.53 (s, 4H), 3.24 (s, 4H), 3.17 (t, J = 8.3 Hz, 2H), 2.43 (d, J = 1.6 Hz, 3H). Example 67 – Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000290_0001
Step 1: Preparation of tert-butyl 7-(1-((2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0506] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (369.6 mg, 1.12 mmol), 2-methylimidazo[1,2-a]pyridin- 6-amine (110 mg, 0.75 mmol), triphosgene (325.9 mg, 1.12 mmol) and TEA (339.3 mg, 3.36 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo, the crude was purified by silica gel column chromatography (MeOH: DCM= 15 %) to give title product (500 mg, crude) as a yellow solid. ESI-MS (M+H) +: 504.3. Step 2: Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0507] A mixture of tert-butyl 7-(1-((2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5] octane-4-carboxylate (100 mg, 0.20 mmol) in 3M HCl / EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (0.98 mg, yield: 1.17 %) as a white solid. ESI-MS (M+H) +: 404.2.1H NMR (400 MHz, MeOD-d4) δ 9.34 (d, J = 1.1 Hz, 1H), 8.02 (d, J = 6.2 Hz, 1H), 7.96 – 7.90 (m, 2H), 7.79 (d, J = 9.6 Hz, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.16 (t, J = 8.5 Hz, 2H), 3.71 – 3.65 (m, 2H), 3.54 – 3.49 (m, 4H), 3.22 (t, J = 8.5 Hz, 2H), 2.54 (s, 3H), 1.18 – 1.13 (m, 2H), 1.11 – 1.06 (m, 2H). Example 68 – Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000291_0001
Compound 68 Step 1: Preparation of tert-butyl 7-(1-((2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0508] To a solution of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.66 mmol) and 2-methylpyrazolo[1,5- a]pyridin-5-amine (132 mg, 0.90 mmol) in THF (10 mL) were added TEA (182 mg, 1.80 mmol) and a solution of triphosgene (71 mg, 0.24 mmol) in THF (1 mL) at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:1) to provide title product (50 mg, yield: 17%) as a white solid. ESI-MS (M+H)+: 504.4.1H NMR (400 MHz, CDCl3) δ 8.23 (d, J = 7.5 Hz, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.78 (dd, J = 7.5, 2.2 Hz, 1H), 6.46 (d, J = 2.4 Hz, 1H), 6.14 (s, 1H), 5.91 (s, 1H), 4.14 (dd, J = 11.3, 5.9 Hz, 2H), 3.71 – 3.67 (m, 2H), 3.30 – 3.23 (m, 2H), 3.09 – 3.00 (m, 4H), 2.44 (s, 3H), 1.48 (s, 9H), 1.08 (t, J = 6.4 Hz, 2H), 0.85 – 0.83 (m, 2H). Step 2: Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0509] To a solution of tert-butyl 7-(1-((2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (40 mg, 0.08 mmol) in DCM (0.5 mL) was added TFA (0.5 mL). The mixture was stirred at rt for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (14 mg, yield: 42%) as a white solid. ESI-MS (M+H)+:404.2.1H NMR (400 MHz, DMSO-d6) δ 9.32 (s, 2H), 8.47 (d, J = 7.5 Hz, 1H), 7.97 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.0 Hz, 1H), 6.91 – 6.83 (m, 1H), 6.65 (d, J = 6.2 Hz, 1H), 6.23 (s, 1H), 4.03 (t, J = 7.8 Hz, 2H), 3.66 – 3.56 (m, 2H), 3.45 (s, 2H), 3.41 – 3.32 (m, 2H), 3.14 (t, J = 8.0 Hz, 2H), 2.34 (s, 3H), 1.05 (t, J = 6.0 Hz, 2H), 0.95 (t, J = 6.2 Hz, 2H). Example 69 – Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000292_0001
step 1 100o C, 16h, N2 step 2
Figure imgf000292_0003
sep step 5
Figure imgf000292_0002
Step 1: Preparation of 6-bromo-2-ethyl-8-fluoroimidazo[1,2-a]pyridine. [0510] To a solution of 5-bromo-3-fluoropyridin-2-amine (10 g, 52.36 mmol) in EtOH (150 mL) were added 1-chlorobutan-2-one (5.58 g, 52.36 mmol) and NaI (1.57 g, 10.47 mmol). The mixture was stirred at 85oC for 16 h in a sealed tube. The mixture was diluted with water (300 mL) and extracted with EA (120 mL x 3). The organic layer was washed with brine (100 mL), dried over Na2SO4 and concentrated. The residue was purified by column chromatography (C18, ACN/0.1% FA in H2O=0 % to 40 %) to afford title product (1 g, 7.86 % yield) as a yellow solid. ESI-MS (M+H) +:243.1.1H NMR (400 MHz, CDCl3) δ 8.04 (d, J = 1.2 Hz, 1H), 7.38 (d, J = 3.0 Hz, 1H), 6.98 (dd, J = 9.6, 1.5 Hz, 1H), 2.84 (q, J = 7.6 Hz, 2H), 1.34 (t, J = 7.6 Hz, 3H). Step 2: Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0511] To a solution of 6-bromo-2-ethyl-8-fluoroimidazo[1,2-a]pyridine (1 g, 4.11 mmol) in 1,4-dioxane (20 mL) were added diphenylmethanimine (890 mg, 4.94 mmol), Pd(OAc)2 (90 mg, 0.41 mmol), BINAP (510 mg, 0.82 mmol) and Cs2CO3 (4.02 g, 12.30 mmol). The mixture was stirred at 100oC for 16 h under N2. The mixture was diluted with water (50 mL) and extracted with EA (35 mL x 3). The organic layer was washed with brine (40 mL), dried over Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, EA/PE=0 % to 50 %) to afford title product (890 mg, 63.00 % yield) as a yellow solid. ESI- MS (M+H) +:344.2.1H NMR (400 MHz, CDCl3) δ 7.75 – 7.71 (m, 2H), 7.53 – 7.48 (m, 1H), 7.44 – 7.40 (m, 3H), 7.37 – 7.31 (m, 3H), 7.24 (d, J = 3.0 Hz, 1H), 7.16 (dd, J = 7.7, 1.6 Hz, 2H), 6.38 (dd, J = 11.5, 1.5 Hz, 1H), 2.79 (q, J = 7.6 Hz, 2H), 1.31 (t, J = 7.6 Hz, 3H). Step 3: Preparation of 2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-amine hydrochloride. [0512] A mixture of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (400 mg, 1.16 mmol) in HCl / EA (8 mL, 4 M) was stirred at r.t for 2 h. The mixture was concentrated. The crude was beating with EA. The mixture was filtered and the filter cake was dried to get title product as a white solid (240 mg, 95.54% yield). ESI-MS (M+H) +:180.3.1H NMR (400 MHz, DMSO-d6) δ 8.08 (s, 1H), 7.81 (s, 1H), 7.36 (d, J = 11.7 Hz, 1H), 2.78 (q, J = 7.5 Hz, 2H), 1.28 (t, J = 7.5 Hz, 3H). Step 4: Preparation of phenyl (2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamate. [0513] To a solution of 2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-amine hydrochloride (240 mg, 1.34 mmol) in DCM (5 mL) were added phenyl carbonochloridate (252 mg, 1.61 mmol) and Pyridine (318 mg, 4.02 mmol) at 0oC. The mixture was stirred at r.t for 1 h. The mixture was diluted with H2O (25 mL) and extracted with DCM (15 mL x 3). The organic layer was washed with brine (20 mL), dried over Na2SO4 and concentrated to afford title product (370 mg, 100 % yield) as a yellow solid. ESI-MS (M+H) +:300.1. Step 5: Preparation of tert-butyl 7-(1-((2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0514] To a solution of phenyl (2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamate (370 mg, 0.49 mmol) in THF (10 mL) were added tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (163 mg, 0.49 mmol) and DIEA (0.21 mL, 1.48 mmol), the mixture was stirred at 50oC for 5 h. The mixture was diluted with H2O (30 mL) and extracted with EA (20 mL x 3). The organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated. The residue was purified by column chromatography (EA/PE=0 % to 50 %) to afford title product (120 mg, 60.41 % yield) as a yellow solid. ESI-MS (M+H) +:536.3. Step 6: Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0515] To a solution of tert-butyl 7-(1-((2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (100 mg, 0.19 mmol) in DCM (2 mL) was added TFA (1 mL), the mixture was stirred at r.t for 1 h. The mixture was concentrated and purified by prep-HPLC (0.05% TFA in H2O / ACN) to get title product (41.97 mg, 51.62% yield) as a yellow solid. ESI-MS (M+H) +:436.1.1H NMR (400 MHz, MeOD-d4) δ 9.18 (d, J = 1.2 Hz, 1H), 8.08 – 8.06 (m, 1H), 8.02 (d, J = 6.2 Hz, 1H), 7.93 (dd, J = 11.6, 1.5 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 4.18 – 4.12 (m, 2H), 3.66 (d, J = 5.1 Hz, 2H), 3.52 – 3.49 (m, 2H), 3.48 (s, 2H), 3.20 (t, J = 8.5 Hz, 2H), 2.92 (q, J = 7.5 Hz, 2H), 1.41 (t, J = 7.6 Hz, 3H), 1.16 – 1.07 (m, 4H).
Example 70 – Preparation of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000295_0001
Step 1: Preparation of 6-bromo-8-fluoroimidazo[1,2-a]pyridine. [0516] To a solution of 5-bromo-3-fluoropyridin-2-amine (5 g, 26.18 mmol) in EtOH (80 mL) was added 2-chloroacetaldehyde (3.06 g, 39.27 mmol). The mixture was stirred reflux at 100oC for 16 h. The mixture was diluted with NaHCO3 solution (150 mL) and extracted with EA (80 mL x 3). The organic layer was washed with brine (100 mL), dried over Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, EA/PE=0 % to 50 %) to afford title product (4.5 g, 79.95 % yield) as a yellow solid. ESI-MS (M+H) +:215.1.1H NMR (400 MHz, CDCl3) δ 8.14 (d, J = 1.0 Hz, 1H), 7.66 (d, J = 1.0 Hz, 1H), 7.63 (dd, J = 3.0, 1.1 Hz, 1H), 7.02 (dd, J = 9.5, 1.5 Hz, 1H). Step 2: Preparation of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine. [0517] To a solution of 6-bromo-8-fluoroimidazo[1,2-a]pyridine (2.5 g, 11.63 mmol) in 1,4- dioxane (50 mL) were added diphenylmethanimine (2.53 g, 13.95 mmol), Pd(OAc)2 (261 mg, 1.16 mmol), BINAP (1.45 g, 2.33 mmol) and Cs2CO3 (11.36 g, 34.88 mmol). The mixture was stirred at 100oC for 16 h under N2. The mixture was diluted with water (50 mL) and extracted with EA (30 mL x 3). The organic layer was washed with brine (40 mL), dried over Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, EA/PE=0 % to 70 %) to afford title product (2.6 g, 70.91 % yield) as a yellow solid. ESI-MS (M+H) +:316.2.1H NMR (400 MHz, CDCl3) δ 7.73 – 7.70 (m, 2H), 7.53 – 7.51 (m, 1H), 7.50 – 7.45 (m, 3H), 7.43 – 7.38 (m, 2H), 7.35 – 7.29 (m, 3H), 7.16 – 7.12 (m, 2H), 6.42 (dd, J = 11.4, 1.5 Hz, 1H). Step 3: Preparation of 8-fluoroimidazo[1,2-a]pyridin-6-amine hydrochloride. [0518] A mixture of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine (400 mg, 1.27 mmol) in HCl / EA (8 mL, 4 M) was stirred at r.t for 2 h. The mixture was filtered and the filter cake was dried to get title product as a white solid (230 mg, 96.65% yield). ESI- MS (M+H) +:152.2. Step 4: Preparation of phenyl (8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamate. [0519] To a solution of 8-fluoroimidazo[1,2-a]pyridin-6-amine hydrochloride (230 mg, 1.23 mmol) in DCM (6 mL) were added phenyl carbonochloridate (232 mg, 1.48 mmol) and Pyridine (292 mg, 3.69 mmol), the mixture was stirred at r.t for 1 h. The mixture was diluted with H2O (40 mL) and extracted with DCM (20 mL x 3). The organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated to afford title product (440 mg, 100 % yield) as a yellow solid. ESI-MS (M+H) +:272.1. Step 5: Preparation of tert-butyl 7-(1-((8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0520] To a solution of phenyl (8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamate (440 mg, 1.62 mmol) in THF (10 mL) were added tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 4,7-diazaspiro[2.5]octane-4-carboxylate (85 mg, 0.26 mmol) and DIEA (0.68 mL, 4.87 mmol), the mixture was stirred at 50oC for 5 h. The mixture was diluted with H2O (25 mL) and extracted with EA (15 mL x 3). The organic layer was washed with brine (20 mL), dried over Na2SO4 and concentrated. The residue was purified by column chromatography (EA/PE=0 % to 50 %) to afford title product (100 mg, 12.15 % yield) as a yellow solid. ESI- MS (M+H) +:508.1. Step 6: Preparation of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0521] To a solution of tert-butyl 7-(1-((8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (50 mg, 0.099 mmol) in DCM (1 mL) was added TFA (0.5 mL), the mixture was stirred at r.t for 1 h. The mixture was concentrated and purified by prep-HPLC (0.05% TFA in H2O / ACN) to get title product (16.54 mg, 40.78% yield) as a yellow solid. ESI-MS (M+H) +:408.2.1H NMR (400 MHz, MeOD-d4) δ 9.21 (s, 1H), 8.24 (t, J = 2.0 Hz, 1H), 8.03 (d, J = 6.2 Hz, 1H), 7.97 (d, J = 1.6 Hz, 1H), 7.86 (d, J = 12.7 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 4.17 – 4.11 (m, 2H), 3.68 – 3.64 (m, 2H), 3.52 – 3.50 (m, 2H), 3.48 (s, 2H), 3.20 (t, J = 8.4 Hz, 2H), 1.15 – 1.07 (m, 4H). Example 71 – Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000297_0001
Step 1: Preparation of 5-bromo-4-fluoro-2-methyl-2H-indazole. [0522] To a mixture of 5-bromo-4-fluoro-1H-indazole (10 g, 46.51 mmol) in EA (200 mL) was added trimethyloxonium tetrafluoroborate (10 g, 69.76 mmol) at r.t. The mixture was stirring at the same temperature for 16 h. The mixture was quenched with sat. NaHCO3 (150 mL) and extracted with EA (200 mL*2). The organic phase was washed with brine, dried over Na2SO4, filtered, and concentrated in vacuo to give the title compound (9.7 g, 91.06%) as a yellow solid. ESI-MS (M+H) +: 228.9.1H NMR (400 MHz, CDCl3) δ 7.97 (s, 1H), 7.44 – 7.28 (m, 2H), 4.22 (s, 3H). Step 2: Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine. [0523] To a solution of 5-bromo-4-fluoro-2-methyl-2H-indazole (4 g, 17.46 mmol), diphenylmethanimine (3.48 g, 19.21 mmol), Cs2CO3 (17.07 g, 52.39 mmol) and Pd(OAc)2 (196 mg, 0.87 mmol) in 1,4-dioxane (20 mL) was added BIANP (1.09 g, 1.75 mmol), the mixture was stirred at 100oC for 16 h under N2. The mixture was diluted with water (300 mL), extracted with EA (180 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The mixture was purified by silica gel column chromatography (PE: EA= 2: 1) to give title product (6.2 g, crude) as a yellow solid ESI-MS (M+H) +: 330.2. Step 3: Preparation of 4-fluoro-2-methyl-2H-indazol-5-amine HCl salt. [0524] To a solution of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (5.8 g, 17.61 mmol) in EA (50 mL) was added HCl in EA (50 mL, 3 M), the mixture was stirred at r.t for 5 h. The precipitate was filtered, the solid was triturated with EA (120 mL) and filtered to give the title compound (2.5 g, 85.96 %) as a pink solid. ESI-MS (M+H) +: 166.1.1H NMR (400 MHz, DMSO-d6) δ 10.13 (s, 2H), 8.71 (s, 1H), 7.57 (d, J = 9.0 Hz, 1H), 7.45 (dd, J = 8.9, 7.4 Hz, 1H), 6.65 (s, 2H), 4.22 (s, 3H). Step 4: Preparation of tert-butyl 7-(1-((4-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0525] To a solution of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (300 mg, 0.91 mmol) and 4-fluoro-2-methyl-2H-indazol- 5-amine (225 mg, 1.36 mmol) in THF (30 mL) was added TEA (459 mg, 4.54 mmol), triphosgene (404 mg, 1.36 mmol) was added slowly at 0oC. The mixture was stirring at r.t for 16 h. The mixture was concentrated in vacuo and purified by silica gel column chromatography (PE: EA= 1: 3) to give the compound (180 mg, 38.01 %) as a yellow solid. ESI-MS (M+H) +: 522.3.1H NMR (400 MHz, DMSO-d6) δ 11.75 (s, 1H), 8.53 (d, J = 5.0 Hz, 1H), 7.97 (dd, J = 14.9, 7.4 Hz, 2H), 7.48 (d, J = 9.2 Hz, 1H), 6.59 (d, J = 6.1 Hz, 1H), 4.25 (s, 3H), 4.08 – 4.01 (m, 2H), 3.66 – 3.59 (m, 2H), 3.37 – 3.34 (m, 2H), 3.23 – 3.14 (m, 4H), 1.49 (s, 9H), 1.01 – 1.00 (m, 2H), 0.91 (t, J = 6.9 Hz, 2H). Step 5: Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0526] To a mixture of tert-butyl 7-(1-((4-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (160 mg, 0.31 mmol) in EA (5 mL) was added 3M HCl/EA (3 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (90 mg, Y: 69.61 %) as a white solid. ESI-MS (M+H) +: 422.2.1H NMR (400 MHz, DMSO-d6) δ 9.45 (s, 2H), 8.50 (s, 1H), 7.91 (d, J = 5.8 Hz, 1H), 7.78 (s, 1H), 7.43 (d, J = 9.2 Hz, 1H), 6.67 (s, 1H), 4.18 (s, 3H), 4.11 – 4.02 (m, 2H), 3.69 – 3.60 (m, 2H), 3.54 – 3.45 (m, 2H), 3.42 – 3.33 (m, 2H), 3.23 – 3.13 (m, 2H), 1.06 – 1.05 (m, 2H), 0.96 – 0.94 (m, 2H). Example 72 – Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000299_0001
Step 1: Preparation of phenyl (2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamate. [0527] To a solution of 2-methylpyrazolo[1,5-a]pyridin-5-amine (200 mg, 1.36 mmol) in DCM (5 mL) were added pyridine (322 mg, 4.08 mmol) and phenyl carbonochloridate (255 mg, 1.63 mmol) at 0 oC. The mixture was stirred at r.t for 2 h. The mixture was diluted with water and extracted with DCM (5 mL*3). The organic layer was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated in vacuo to give title compound (260 mg, yield: 72%) as a brown solid. ESI-MS (M+H) +: 268.1.1H NMR (400 MHz, DMSO-d6) δ 10.49 (s, 1H), 8.49 (d, J = 7.5 Hz, 1H), 7.35 – 7.31 (m, 2H), 7.28 – 7.24 (m, 2H), 7.18 – 7.13 (m, 1H), 6.86 (dd, J = 7.5, 2.3 Hz, 1H), 6.76 – 6.74 (m, 1H), 6.24 (s, 1H), 2.33 (s, 3H). Step 2: Preparation of tert-butyl 4-(1-((2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0528] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.49 mmol ), phenyl (2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamate (158 mg, 0.59 mmol) and TEA (148 mg, 1.47 mmol) in THF (5 mL) was stirred at 70 oC for 16h. The mixture was concentrated and the residue was purified by silica gel column chromatography (PE: EA=1:1) to give the title compound (100 mg, yield: 43%) as a white solid. ESI-MS (M+H) +:478.0.1H NMR (400 MHz, CDCl3) δ 8.24 (d, J = 7.4 Hz, 1H), 7.92 (d, J = 6.2 Hz, 1H), 6.78 (dd, J = 7.5, 2.2 Hz, 1H), 6.43 (d, J = 5.8 Hz, 1H), 6.37 (d, J = 6.1 Hz, 1H), 6.14 (s, 1H), 4.21 (t, J = 8.4 Hz, 2H), 4.19 – 4.13 (m, 2H), 3.26 – 3.21 (m, 4H), 3.20 – 3.13 (m, 4H), 2.44 (s, 3H), 1.49 (s, 9H). Step 3: Preparation of N-(2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0529] To a solution of tert-butyl 4-(1-((2-methylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.17 mmol) in DCM (0.5 mL) was added TFA (0.5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (38 mg, yield: 59%) as a white solid. ESI-MS (M+H)+:378.2. 1H NMR (400 MHz, DMSO-d6) δ 8.79 (s, 2H), 8.47 (d, J = 7.5 Hz, 1H), 7.99 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 2.0 Hz, 1H), 6.86 (dd, J = 7.4, 2.2 Hz, 1H), 6.64 (d, J = 5.8 Hz, 1H), 6.23 (s, 1H), 4.06 – 4.01 (m, 2H), 3.56 – 3.46 (m, 4H), 3.27 – 3.20 (m, 4H), 3.15 (t, J = 8.2 Hz, 2H), 2.33 (s, 3H). Example 73 – Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000300_0001
Step 1: Preparation of tert-butyl 4-(1-((2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0530] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (410.4 mg, 1.35 mmol), phenyl (2-methylimidazo[1,2-a]pyridin-6-yl)carbamate (300 mg, 1.12 mmol) and DMAP (13.6 mg, 0.11 mmol) in THF (10 mL) was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH: DCM= 4 %) to give title product (210 mg, 35.98%) as a white solid. ESI-MS (M+H) +: 478.3.1H NMR (400 MHz, CDCl3) δ 11.70 (s, 1H), 8.97 (s, 1H), 7.91 (d, J = 6.0 Hz, 1H), 7.45 (d, J = 9.5 Hz, 1H), 7.30 (s, 1H), 7.02 (dd, J = 9.5, 1.9 Hz, 1H), 6.37 (d, J = 6.1 Hz, 1H), 4.18 – 4.13 (m, 2H), 3.58 – 3.55 (m, 4H), 3.26 – 3.22 (m, 4H), 3.10 (t, J = 8.6 Hz, 2H), 2.44 (s, 3H), 1.49 (s, 9H). Step 2: Preparation of N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0531] A mixture of tert-butyl 4-(1-((2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (150 mg, 0.31 mmol) in 3M HCl / EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep- HPLC (0.1% TFA in H2O / ACN) to give title product (77.60 mg, yield: 66.39 %) as a white solid. ESI-MS (M+H) +: 378.1.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 9.39 (s, 1H), 8.96 (s, 2H), 8.17 (s, 1H), 7.99 (d, J = 6.1 Hz, 1H), 7.94 – 7.86 (m, 2H), 6.66 (d, J = 6.2 Hz, 1H), 4.05 (t, J = 8.5 Hz, 2H), 3.57 – 3.49 (m, 4H), 3.28 – 3.16 (m, 6H), 2.48 (s, 3H). Example 74 – Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000301_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate. [0532] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (1 g, 6.45 mmol) and tert-butyl (R)-2-methylpiperazine-1-carboxylate (2.58 g, 12.90 mmol) in DIEA (2 mL) was stirred at 140oC for 24 h in a sealed tube. The mixture was concentrated in vacuo and purified by silica gel column (DCM: MeOH = 20: 1) to give title product (600 Mg, Y: 29.2%) as a white solid. ESI-MS (M+H) +: 319.1. Step 2: Preparation of tert-butyl (R)-4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0533] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (500 mg, 1.57 mmol) and 8-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (260 mg, 1.57 mmol) in THF (15 mL) were added TEA (475 mg, 4.70 mmol) and triphosgene (933 mg, 3.14 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (15 mL), extracted with DCM (15 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 1: 5) to give title product (300 mg, Y: 37.5%) as a yellow solid. ESI-MS (M+H) +: 510.3.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 8.82 (d, J = 1.6 Hz, 1H), 7.92 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.4 Hz, 1H), 7.23 (dd, J = 12.5, 1.6 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.25 – 4.11 (m, 1H), 4.03 – 3.94 (m, 2H), 3.83 – 3.74 (m, 1H), 3.68 – 3.55 (m, 2H), 3.20 – 3.05 (m, 4H), 2.98 – 2.89 (m, 1H), 2.33 (s, 3H), 1.42 (s, 9H), 1.18 (d, J = 6.7 Hz, 3H). Step 3: Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0534] A mixture of tert-butyl (R)-4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (250 mg, 0.49 mmol) in 4M HCl / EA (10 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (55 mg, Y: 27.4 %) as a white solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, DMSO-d6) δ 12.01 (s, 1H), 9.13 (s, 2H), 8.81 (s, 1H), 8.12 (s, 1H), 7.97 (d, J = 6.1 Hz, 1H), 7.82 (d, J = 12.5 Hz, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.05 – 4.01 (m, 2H), 3.85 – 3.78 (m, 2H), 3.43 – 3.34 (m, 2H), 3.25 – 3.10 (m, 4H), 3.04 – 2.95 (m, 1H), 2.44 (s, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 75 – Preparation of (R)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000302_0001
Step 1: Preparation of (R)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0535] A mixture of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (150 mg, 0.37 mmol), AcOH (109.8 mg, 1.83 mmol) and (CHO)n (54.9 mg, 1.83 mmoL) in MeOH (6 mL) was stirred at 50℃ for 1 h. NaBH3CN (69 mg, 1.1 mmol) was added to the mixture and stirred at 50℃ for 16 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (22 mg, Y: 14.2 %) as a white solid. ESI-MS (M+H) +: 424.1.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 9.87 (s, 1H), 9.14 (s, 1H), 8.13 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 12.1 Hz, 1H), 6.69 (d, J = 6.1 Hz, 1H), 4.08 – 4.01 (m, 2H), 3.96 – 3.89 (m, 2H), 3.35 – 3.32 (m, 1H), 3.27 – 3.15 (m, 5H), 3.06 – 2.98 (m, 1H), 2.88 (s, 3H), 2.44 (s, 3H), 1.33 (d, J = 6.3 Hz, 3H). Example 76 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000303_0001
Compound 76 Step 1: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0536] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (180 mg, 0.60 mmol) in THF (10 mL) were added 8- fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (269 mg, 1.80 mmol), TEA (273 mg, 3.00 mmol) and triphosgene (320 mg, 1.20 mmol) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=4:1) to give title product (140 mg, yield: 44 %) as a white solid. ESI-MS (M+H) +:524.3. 1H NMR (400 MHz, DMSO-d6) δ 11.95 (s, 1H), 8.82 (d, J = 1.6 Hz, 1H), 7.90 – 7.78 (m, 2H), 7.24 (dd, J = 12.5, 1.6 Hz, 1H), 6.43 (d, J = 6.3 Hz, 1H), 4.00 – 3.91 (m, 2H), 3.74 – 3.68 (m, 2H), 3.61 – 3.50 (m, 4H), 3.31 – 3.28 (m, 2H), 2.33 (s, 3H), 1.44 (s, 9H), 1.38 (s, 6H). Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0537] To a mixture of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (130 mg, 0.25 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title compound (110 mg, 95 %) as a white solid.40 mg of HCl of product was diluted in TFA (0.2 M in H2O) (5 mL). Concentration under reduced pressure to give title product (31.66 mg, 67 %) as a white solid. ESI-MS (M+H) +:424.2.1H NMR (400 MHz, MeOD-d4) δ 9.15 (s, 1H), 8.10 (s, 1H), 8.06 (d, J = 11.8 Hz, 1H), 7.90 (s, 1H), 6.95 (s, 1H), 4.50 – 4.26 (m, 2H), 4.06 – 3.83 (m, 2H), 3.81 – 3.65 (m, 2H), 3.58 – 3.45 (m, 4H), 2.58 (s, 3H), 1.51 (s, 6H). Example 77 – Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000304_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0538] To a solution of tert-butyl (S)-4-(2, 3-dihydro-1H-pyrrolo [2, 3-b] pyridin-4-yl)-2- methylpiperazine-1-carboxylate (300 mg, 0.94 mmol) and phenyl (8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamate (296 mg, 1.03 mmol) in THF (3 mL) was added TEA (285 mg, 2.82 mmol). The reaction mixture was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 0: 1) to give title product (348 mg, 70%) as a white solid. ESI-MS (M+H) +: 510.3. 1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 8.82 (d, J = 1.5 Hz, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.25 (d, J = 11.6 Hz, 1H), 7.88 – 7.79 (m, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.23 – 4.14 (m, 1H), 4.03 – 3.95 (m, 2H), 3.82 – 3.75 (m, 1H), 3.68 – 3.53 (m, 2H), 3.23 – 3.06 (m, 4H), 2.97 – 2.88 (m, 1H), 1.43 (s, 9H), 1.19 (d, J = 6.6 Hz, 3H). Step 2: Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0539] To a solution of tert-butyl (S)-4-(1-((8-fluoro-2-methylimidazo [1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (330 mg, 0.65 mmol) in EA (5 mL) was added 4M HCl / EA (5 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtrated and dried in vacuo to give title product (300 mg, crude). The compound (50 mg) was purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (31.96 mg, yield: 50 %) as a white solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, MeOD-d4) δ 9.17 (d, J = 1.2 Hz, 1H), 8.03 (d, J = 6.2 Hz, 2H), 7.93 (dd, J = 11.6, 1.5 Hz, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.19 – 4.12 (m, 2H), 3.92 – 3.85 (m, 2H), 3.55 – 3.46 (m, 2H), 3.30 – 3.28 (m, 2H), 3.27 – 3.23 (m, 2H), 3.15 – 3.01 (m, 1H), 2.55 (d, J = 0.9 Hz, 3H), 1.41 (d, J = 6.6 Hz, 3H). [0540] [0541] Example 78 - (S)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000305_0001
[0543] Step 1: Preparation of (S)-4-(3,4-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. To a solution of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (60 mg, 0.15 mmol) and (CH2O)n (39 mg, 0.44 mmol) in MeOH (2 mL) was added HOAC (45 mg, 0.75 mmol) at RT for 1 h. NaBH3CN (28 mg, 0.45 mmol) was added to the mixture and stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (29.95 mg, yield: 37 %) as a white solid. ESI-MS (M+H) +: 424.2.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 10.20 (s, 1H), 9.18 (s, 1H), 8.18 (s, 1H), 7.95 (dd, J = 15.9, 9.1 Hz, 2H), 6.70 (d, J = 6.1 Hz, 1H), 4.08 – 4.01 (m, 2H), 3.98 – 3.91 (m, 1H), 3.84 – 3.63 (m, 1H), 3.62 – 3.53 (m, 1H), 3.43 – 3.28 (m, 2H), 3.27 – 3.17 (m, 3H), 3.10 – 2.99 (m, 1H), 2.92 – 2.81 (m, 3H), 2.45 (d, J = 5.6 Hz, 3H), 1.34 (d, J = 6.3 Hz, 3H). Example 79 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000306_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0544] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (400 mg, 1.2 mmol) and TEA (370 mg, 3.6 mmol) in THF (12 mL) was added triphosgene (713 mg, 2.4 mmol) at 0oC, the mixture was stirred at RT for 1 h.8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (199 mg, 1.2 mmol) was added. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (12 mL), extracted with EA (12 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 1: 4) to give title product (170 mg, Y: 27.0%) as a green solid. ESI-MS (M+H) +: 524.2. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0545] A mixture of tert-butyl (2R,6S)-4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (150 mg, 0.29 mmol) in 4M HCl / EA (6 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (36 mg, Y: 29.7 %) as a white solid. ESI-MS (M+H) +: 424.1. 1H NMR (400 MHz, DMSO-d6) δ 12.01 (s, 1H), 9.37 (d, J = 9.1 Hz, 1H), 9.17 (s, 1H), 8.73 (d, J = 10.3 Hz, 1H), 8.17 (s, 1H), 7.96 (d, J = 6.2 Hz, 1H), 7.91 (d, J = 12.0 Hz, 1H), 6.71 (d, J = 6.3 Hz, 1H), 3.90 – 3.85 (m, 4H), 3.44 – 3.35 (m, 2H), 3.25 – 3.17 (m, 2H), 2.98 – 2.89 (m, 2H), 2.46 (s, 3H), 1.27 (d, J = 6.5 Hz, 6H). Example 80 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methyl-4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000307_0001
0 Step 1: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0546] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol), phenyl (8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamate (207.27 mg, 0.73 mmol), TEA (184.8 mg, 1.83 mmol) in THF (10 mL) was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 71 %) to give title product (120 mg, 37.76 %) as a white solid. ESI-MS (M+H) +: 522.3.1H NMR (400 MHz, CDCl3) δ 11.75 (s, 1H), 8.77 (d, J = 1.5 Hz, 1H), 7.89 (d, J = 6.0 Hz, 1H), 7.36 (d, J = 2.4 Hz, 1H), 6.82 (dd, J = 11.3, 1.6 Hz, 1H), 6.33 (d, J = 6.1 Hz, 1H), 4.13 (t, J = 8.0 Hz, 2H), 3.71 – 3.68 (m, 2H), 3.29 – 3.25 (m, 2H), 3.08 – 3.04 (m, 4H), 2.45 (s, 3H), 1.49 (s, 9H), 1.10 – 1.07 (m, 2H), 0.85 – 0.82 (m, 2H). Step 2: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0547] A mixture of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (110 mg, 0.21 mmol) in 3M HCl / EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (120 mg, crude) as a white solid. ESI-MS (M+H) +: 422.1.1H NMR (400 MHz, DMSO-d6) δ 10.17 (s, 2H), 9.21 (s, 1H), 8.27 (s, 1H), 8.15 (d, J = 10.0 Hz, 1H), 7.92 (d, J = 5.8 Hz, 1H), 6.73 (s, 1H), 4.20 – 4.07 (m, 2H), 3.80 – 3.69 (m, 2H), 3.61 – 3.50 (m, 2H), 3.31 – 3.21 (m, 4H), 2.49 (s, 3H), 1.17 – 1.15 (m, 2H), 0.93 – 0.90 (m, 2H). Step 3: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-methyl-4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0548] A mixture of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide HCl salt (120 mg, 0.28 mmol), (CH2O)n (77 mg, 0.85 mmol), TEA (86 mg, 0.85 mmol) and NaBH3CN (51.3 mg, 0.85 mmol) in MeOH (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the crude was diluted with water (20 mL), extracted with EA (20 mL×3). The organic layer was washed with brine (20 mL), dried with Na2SO4 and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (48.94 mg, yield: 39.47 %) as a colorless oil. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 11.99 (s, 1H), 9.21 (s, 1H), 8.22 (s, 1H), 7.99 (dd, J = 13.5, 9.1 Hz, 2H), 6.69 (d, J = 6.3 Hz, 1H), 4.05 (t, J = 8.4 Hz, 2H), 3.74 (s, 3H), 3.50 (s, 3H), 3.19 (t, J = 8.4 Hz, 2H), 2.97 (s, 3H), 2.47 (s, 3H), 1.25 (s, 2H), 0.98 (s, 2H). Example 81 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- ((3R,5S)-3,4,5-trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000308_0001
Step 1: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((3R,5S)-3,4,5- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0549] A mixture of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt (80 mg, 0.19 mmol), AcOH (56.6 mg, 0.94 mmol) and (CHO)n (28.3 mg, 0.94 mmoL) in MeOH (6 mL) was stirred at 50℃ for 1 h. NaBH3CN (35.9 mg, 0.57 mmol) was added. The mixture was stirred at 50℃ for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (31 mg, Y: 37.5 %) as a yellow solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 9.84 (s, 1H), 9.14 (s, 1H), 8.14 (s, 1H), 7.97 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 12.1 Hz, 1H), 6.71 (d, J = 6.2 Hz, 1H), 4.06 – 4.00 (m, 2H), 3.99 – 3.91 (m, 2H), 3.47 – 3.35 (m, 2H), 3.25 – 3.17 (m, 2H), 3.15 – 3.03 (m, 2H), 2.88 (s, 3H), 2.44 (s, 3H), 1.37 (d, J = 6.3 Hz, 6H). Example 82 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3,3,5,5- tetramethyl-2-oxopiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000309_0001
Step 1: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3,3,5,5- tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0550] To a solution of 1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,3,5,5- tetramethylpiperazin-2-one (50 mg, 0.19 mmol) in THF (10 mL) were added phenyl (7- fluoro-2-methyl-2H-indazol-5-yl)carbamate (66 mg,0.23 mmol), DMAP (70 mg, 0.58 mmol). Then the reaction mixture was stirred at 70 oC for 16 h. After cooling to rt, the mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.05% TFA in H2O / MeCN) to give the title compound (20 mg, 17.9 %) as a yellow solid. ESI-MS: [M+H]+: 466.2.1H NMR (400 MHz, MeOD-d4) δ 8.23 (dd, J = 11.9, 4.0 Hz, 2H), 7.74 (s, 1H), 7.23 (dd, J = 12.7, 1.3 Hz, 1H), 6.93 (d, J = 5.8 Hz, 1H), 4.21 (s, 3H), 4.16 (t, J = 8.6 Hz, 2H), 4.00 (s, 2H), 3.05 (t, J = 8.5 Hz, 2H), 1.78 (s, 6H), 1.63 (s, 6H). Example 83 – Preparation of N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000310_0001
Step 1: Preparation of tert-butyl 7-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0551] A mixture of 6-ethoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (150 mg, 0.68 mmol), TEA (183 mg, 1.82 mmol) and DPPA (248 mg, 0.90 mmol) in Tol (4 mL) was stirred at RT for 1 h, heated to 80oC and stirred for 1h, tert-butyl 7-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.45 mmol) was added. The mixture was stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 4) to give title product (100 mg, Y: 39.2%) as a yellow solid. ESI-MS (M+H) +: 548.2. Step 2: Preparation of N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0552] A mixture of tert-butyl 7-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (80 mg, 0.15 mmol) in 4M HCl / EA (4 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (53 mg, Y: 81.0 %) as a pink solid. ESI-MS (M+H) +: 448.2.1H NMR (400 MHz, DMSO-d6) δ 12.22 (s, 1H), 9.24 (s, 2H), 8.28 (s, 1H), 8.24 (s, 1H), 7.90 (d, J = 6.0 Hz, 1H), 6.61 (d, J = 6.1 Hz, 1H), 6.16 (s, 1H), 4.15 – 4.09 (m, 2H), 4.04 – 3.98 (m, 4H), 3.59 – 3.52 (m, 2H), 3.39 – 3.32 (m, 2H), 3.16 – 3.07 (m, 2H), 2.30 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H), 1.10 – 0.90 (m, 4H). Example 84 – Preparation of N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000311_0001
Step 1: Preparation of tert-butyl 4-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0553] A mixture of 6-ethoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (163mg, 0.74 mmol), TEA (199 mg, 1.97 mmol) and DPPA (270.5 mg, 0.98 mmol) in Tol (4 mL) was stirred at RT for 1 h, heated to 80oC and stirred for 1h, tert-butyl 4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (150 mg, 0.49 mmol) was added. The mixture was stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 4) to give title product (100 mg, Y: 39.0%) as a yellow solid. ESI-MS (M+H) +: 522.3.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 8.27 (s, 1H), 8.25 (s, 1H), 7.86 (d, J = 6.0 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 6.16 (s, 1H), 4.15 – 4.08 (m, 2H), 4.04 – 3.94 (m, 2H), 3.48 – 3.42 (m, 4H), 3.30 – 3.24 (m, 4H), 3.17 – 3.08 (m, 2H), 2.31 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0554] A mixture of tert-butyl 4-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.15 mmol) in 4M HCl / EA (6 mL) was stirred at RT for 1 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (53 mg, Y: 82.0 %) as a pink solid. ESI-MS (M+H) +: 422.1.1H NMR (400 MHz, DMSO-d6) δ 12.22 (s, 1H), 8.80 (s, 2H), 8.28 (s, 1H), 8.25 (s, 1H), 7.91 (d, J = 6.0 Hz, 1H), 6.62 (d, J = 6.1 Hz, 1H), 6.16 (s, 1H), 4.16 – 4.09 (m, 2H), 4.06 – 3.98 (m, 2H), 3.53 – 3.43 (m, 4H), 3.28 – 3.19 (m, 4H), 3.18 – 3.08 (m, 2H), 2.30 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H). Example 85 – Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000312_0001
Step 1: Preparation of tert-butyl 4-(1-((2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0555] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (200 mg, 0.66 mmol) and 2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-amine (177 mg, 0.99 mmol) in THF (10 mL) were added TEA (300 mg, 2.97 mmol) and a solution of triphosgene (196 mg, 0.66 mmol) in THF (1 mL) at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:1) to provide title product (180 mg, yield: 54%) as a white solid. ESI-MS (M+H)+:510.3.1H NMR (400 MHz, DMSO-d6) δ 8.83 (d, J = 1.6 Hz, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.85 (d, J = 3.1 Hz, 1H), 7.27 – 7.24 (m, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.01 – 3.95 (m, 2H), 3.46 – 3.42 (m, 4H), 3.30 – 3.26 (m, 4H), 3.13 (t, J = 8.6 Hz, 2H), 2.73 – 2.68 (m, 2H), 1.43 (s, 9H), 1.27 – 1.24 (m, 3H). Step 2: Preparation of N-(2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0556] To a solution of tert-butyl 4-(1-((2-ethyl-8-fluoroimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (150 mg, 0.29 mmol) in DCM (1.5 mL) was added TFA (1.5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (75 mg, yield: 63%) as a white solid. ESI-MS (M+H)+:410.0.1H NMR (400 MHz, DMSO-d6) δ 9.11 (s, 1H), 8.84 (s, 2H), 8.14 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 7.78 (s, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.06 – 4.01 (m, 2H), 3.54 – 3.48 (m, 4H), 3.26 – 3.21 (m, 4H), 3.17 (t, J = 8.5 Hz, 2H), 2.79 (q, J = 7.7 Hz, 2H), 1.29 (t, J = 7.5 Hz, 3H). Example 86 – Preparation of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000313_0001
Step 1: Preparation of tert-butyl 4-(1-((8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0557] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (200 mg, 0.66 mmol) and 8-fluoroimidazo[1,2-a]pyridin-6-amine (157 mg, 0.99 mmol) in THF (10 mL) were added TEA (300 mg, 2.97 mmol) and a solution of triphosgene (196 mg, 0.66 mmol) in THF (1 mL) at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:3) to provide title product (150 mg, yield: 47%) as a white solid. ESI-MS (M+H)+: 482.1.1H NMR (400 MHz, DMSO-d6) δ 11.86 (s, 1H), 8.13 – 8.10 (m, 1H), 7.94 (d, J = 6.1 Hz, 1H), 7.39 (d, J = 0.9 Hz, 2H), 7.31 (dd, J = 12.5, 1.6 Hz, 1H), 6.56 (d, J = 6.2 Hz, 1H), 3.99 (t, J = 8.5 Hz, 2H), 3.47 – 3.43 (m, 4H), 3.31 – 3.28 (m, 4H), 3.18 – 3.16 (m, 2H), 1.43 (s, 9H). Step 2: Preparation of N-(8-fluoroimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0558] To a solution of tert-butyl 4-(1-((8-fluoroimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (120 mg, 0.25 mmol) in DCM (1 mL) was added TFA (1 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (75 mg, yield: 79%) as a white solid. ESI-MS (M+H)+:382.1.1H NMR (400 MHz, DMSO-d6) δ 9.25 – 9.17 (m, 1H), 8.88 (s, 2H), 8.37 (s, 1H), 7.97 (d, J = 6.0 Hz, 2H), 7.81 (d, J = 11.9 Hz, 1H), 6.67 (d, J = 6.2 Hz, 1H), 4.05 (t, J = 8.4 Hz, 2H), 3.59 – 3.47 (m, 4H), 3.27 – 3.21 (m, 4H), 3.21 – 3.14 (m, 2H). Example 87 – Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000314_0001
Step 1: Preparation of tert-butyl 4-(1-((4-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0559] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (120 mg, 0.40 mmol) and 4-fluoro-2-methyl-2H-indazol-5-amine (130 mg, 0.79 mmol) in THF (15 mL) were added TEA (199 mg, 1.97 mmol), then triphosgene (173 mg, 0.59 mmol) was added slowly at 0oC, the mixture was stirred at r.t for 16 h. The mixture was concentrated and purified by silica gel column chromatography (PE: EA= 1: 4) to give the compound (60 mg, 30.71%) as a yellow solid. ESI-MS (M+H) +: 496.2.1H NMR (400 MHz, CDCl3) δ 11.63 (s, 1H), 8.02 (s, 1H), 7.93 (s, 1H), 7.45 (d, J = 8.7 Hz, 1H), 7.27 (s, 1H), 6.36 (s, 1H), 4.36 – 4.11 (m, 5H), 3.66 – 3.52 (m, 4H), 3.33 – 3.18 (m, 4H), 3.16 – 3.06 (m, 2H), 1.49 (s, 9H). Step 2: Preparation of N-(4-fluoro-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0560] To a mixture of tert-butyl 4-(1-((4-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (55 mg, 0.11 mmol) in EA (3 mL) was added 3M HCl/EA (2 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (36 mg, Y: 63.67 %) as an off-white solid. ESI-MS (M+H) +: 396.3.1H NMR (400 MHz, DMSO- d6) δ 9.59 (s, 2H), 8.54 (s, 1H), 7.84 (s, 1H), 7.45 (d, J = 8.9 Hz, 1H), 7.00 – 6.57 (m, 1H), 4.19 (s, 3H), 4.18 – 4.01 (m, 2H), 3.73 – 3.53 (m, 4H), 3.45 – 3.26 (m, 2H), 3.24 – 3.08 (m, 4H). Example 88 – Preparation of (S)-4-(4-(cyclopropylmethyl)-3-methylpiperazin-1-yl)-N- (8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine- 1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000315_0001
Step 1: Preparation of (S)-4-(4-(cyclopropylmethyl)-3-methylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0561] To a solution of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide (50 mg, 0.12 mmol) and (bromomethyl)cyclopropane (20 mg, 0.15 mmol) in DMF (1 mL) was added K2CO3 (40 mg, 0.36 mmol). The reaction mixture was stirred at 70 oC for 16 h. The mixture was diluted with water (10 mL), extracted with EA (4 mL×3). The organic layer was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (30.74 mg, yield: 43 %) as a white solid. ESI-MS (M+H) +: 464.6.1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 9.60 (s, 1H), 9.13 (s, 1H), 8.12 (s, 1H), 7.98 (d, J = 6.2 Hz, 1H), 7.80 (s, 1H), 6.69 (d, J = 6.3 Hz, 1H), 4.06 – 4.02 (m, 2H), 3.98 – 3.90 (m, 2H), 3.78 – 3.73 (m, 1H), 3.49 – 3.41 (m, 1H), 3.36 – 3.18 (m, 5H), 3.13 – 3.06 (m, 2H), 2.43 (s, 3H), 1.35 (d, J = 6.2 Hz, 3H), 1.12 – 1.04 (m, 1H), 0.74 – 0.64 (m, 2H), 0.47 – 0.35 (m, 2H). Example 89 – Preparation of (S)-4-(4-ethyl-3-methylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000315_0002
Step 1: Preparation of (S)-4-(4-ethyl-3-methylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0562] A mixture of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.09 mmol), acetaldehyde (11 mg, 0.25 mmol), NaBH3CN (15.7 mg, 0.25 mmol) and TEA (48.5 mg, 0.48 mmol) in MeOH (3 mL) was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (43.17 mg, yield: 80.69%) as a colorless oil. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, MeOD-d4) δ 9.18 (d, J = 1.2 Hz, 1H), 8.05 – 8.01 (m, 2H), 7.96 (dd, J = 11.5, 1.5 Hz, 1H), 6.71 (d, J = 6.3 Hz, 1H), 4.18 (t, J = 8.5 Hz, 2H), 4.08 – 3.83 (m, 2H), 3.77 – 3.49 (m, 3H), 3.35 – 3.32 (m, 2H), 3.29 – 3.20 (m, 4H), 2.56 (d, J = 0.9 Hz, 3H), 1.48 (d, J = 6.6 Hz, 3H), 1.39 (t, J = 7.3 Hz, 3H). Example 90 – Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- (2-methoxyethyl)-3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000316_0001
Step 1: Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-(2- methoxyethyl)-3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate. [0563] To a solution of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.10 mmol) and 1-bromo-2-methoxyethane (27 mg, 0.20 mmol) in DMF(1 mL) was added K2CO3 (40 mg, 0.29 mmol), the mixture was stirred at 70oC for 16 h. The mixture was purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (6 mg, Y: 13.14 %) as a yellow solid. ESI-MS (M+H) +: 468.2.1H NMR (400 MHz, MeOD-d4) δ 9.15 (s, 1H), 8.02 (d, J = 5.5 Hz, 2H), 7.93 (d, J = 11.6 Hz, 1H), 6.69 (d, J = 6.2 Hz, 1H), 4.20 – 4.13 (m, 2H), 3.90 – 3.56 (m, 8H), 3.44 (s, 3H), 3.30 – 3.17 (m, 5H), 2.55 (s, 3H), 1.49 (d, J = 6.5 Hz, 3H). Example 91 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3,3,4- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000317_0001
Step 1: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3,3,4- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0564] To a solution of 4-(3,3-dimethylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (60 mg, 0.14 mmol) in MeOH (5 mL) were added (CH2O)n (13 mg, 0.42 mmol),CH3COOH (42 mg, 0.70 mmol). The mixture was stirred at r.t for 1 h, NaBH3CN (27 mg, 0.42 mmol) was added to the mixture and stirred at 50 oC for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep- HPLC (0.1% TFA in H2O / ACN) to give title product (30.90 mg, yield: 42 %) as a colorless oil. ESI-MS (M+H) +:438.2.1H NMR (400 MHz, MeOD-d4) δ 9.18 (d, J = 1.2 Hz, 1H), 8.04 (dd, J = 5.6, 4.5 Hz, 2H), 7.96 (dd, J = 11.5, 1.5 Hz, 1H), 6.71 (d, J = 6.2 Hz, 1H), 4.18 (t, J = 8.5 Hz, 2H), 4.07 – 3.69 (m, 2H), 3.55 – 3.48 (m, 2H), 3.34 – 3.32 (m, 2H), 3.29 – 3.25 (m, 2H), 2.90 (s, 3H), 2.56 (d, J = 0.9 Hz, 3H), 1.50 (s, 6H).
Example 92 – Preparation of 6-cyclopropyl-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt.
Figure imgf000318_0001
Step 1: Preparation of tert-butyl (2-(4-bromo-2,6-dichloropyridin-3-yl)ethyl)carbamate. [0565] To a solution of LDA (13 mL, 26.54 mmol) in THF (20 mL) was added 4-bromo-2,6- dichloropyridine (5.0 g, 22.12 mmol) at -78 oC under N2. Then the mixture was stirred at -78 oC for 1 h under N2. Then tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (5.9 g, 26.54 mmol) was added to the above mixture at -78 oC, the mixture was stirred at -78 oC for 3 h. Then the mixture was quenched with NH4Cl solution (100 mL), and extracted with EtOAc (100 mL x 3). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by column flash chromatography (EA/PE=0%~30%) to afford the title product (3.2 g, 39.10 % yield) as a yellow solid. ESI- MS (M+H) +: 314.9. Step 2: Preparation of tert-butyl 4-bromo-6-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate. [0566] To a solution of tert-butyl (2-(4-bromo-2,6-dichloropyridin-3-yl)ethyl)carbamate (3.2 g, 8.65 mmol) in THF (60 mL) was added NaH (1.4 g, 34.60 mmol) at 0 oC. Then the mixture was stirred at 50 oC for 2 h under N2. Then the mixture was quenched with NH4Cl solution (100 mL), and extracted with EtOAc (100 mL x 3). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by column flash chromatography (EA/PE=0%~20%) to afford the title product (1.8 g, 63.10 % yield) as a white solid. ESI-MS (M+H) +: 335.0. Step 3: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-chloro-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0567] To a solution of tert-butyl 4-bromo-6-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine- 1-carboxylate (1.8 g, 5.40 mmol) in 1,4-dioxane (20 mL) were added Cs2CO3 (3.5 g, 10.80 mmol), Xantphos (636 mg, 1.10 mmol) and Pd2(dba)3 (458 mg, 0.50 mmol) at rt under N2. Then the mixture was stirred at 110 oC for 4 h under N2. The reaction mixture was diluted with water (50 mL), extracted with EtOAc (50 mL x 3). The organic layers were dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by silica gel chromatography (eluted with PE in EA from 0% to 50%) to afford the title product (1.1 g, 43.12 % yield) as a yellow solid. ESI-MS (M+H) +: 473.6. Step 4: tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-cyclopropyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxylate. [0568] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-cyclopropyl- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (1.1 g, 2.33 mmol) in toluene (10 mL) were added cyclopropylboronic acid (240 mg, 2.80 mmol), Pd(OAc)2 (26 mg, 0.11 mmol), Cy3P (61 mg, 0.22 mmol) and H2O (0.5 mL) at rt under N2. Then the mixture was stirred at 110 oC for 16 h under N2. The reaction mixture was diluted with water (50 mL), extracted with EtOAc (50 mL x 3). The organic layers were dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by silica gel chromatography (eluted with PE in EA from 0% to 50%) to afford the title product (850 mg, 76.50 % yield) as a yellow solid. ESI-MS (M+H) +: 479.3. Step 5: benzyl 4-(6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0569] A mixture of tert-butyl (S)-4-(8-cyano-2-(5-fluoro-3-methyl-2-oxo-2,3-dihydro-1H- benzo[d]imidazol-1-yl)quinoxalin-6-yl)-2-methylpiperazine-1-carboxylate (850.0 mg, 0.28 mmol) in TFA (5 mL) and DCM (5 mL) was stirred at 25 ℃ for 16 h under N2. PH of the mixture was adjusted to neutral by NaHCO3, and extracted with EtOAc (50 mL x 3). The organic layers were dried over Na2SO4, filtered and concentrated to afford the title product (420 mg, 62.50 % yield) as a yellow solid, which was used to the next step without further purification. ESI-MS (M+H) +: 379.3. Step 6: benzyl 4-(6-cyclopropyl-1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0570] To a solution of benzyl 4-(6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (210.0 mg, 0.56 mmol) and triethylamine (280 mg, 0.28 mmol) in THF (10 mL) was added triphosgene (246 mg, 0.83 mmol) at 0 oC under N2. The mixture was stirred for 1 h at 0 oC. Then 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (137 mg, 0.83 mmol) in THF (6 mL) was dropwised to the above reaction mixture, and stirred for 12 h at 70 oC. The reaction mixture was diluted with water (10 mL), extracted with EA (50 mL x 3). The organic layers were dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by silica gel chromatography (eluted with PE in EA from 0% to 50%) to afford the title product (128 mg, 40.30 % yield) as a yellow solid. ESI-MS (M+H) +: 544.5. Step 7: 6-cyclopropyl-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt. [0571] A mixture of benzyl 4-(6-cyclopropyl-1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (30 mg, 0.05 mmol) in HBr (0.5 mL) and DCM (5 mL) was stirred at 25 ℃ for 2 h under N2. The mixture was concentrated and purified by pre-HPLC (0.1 % TFA in water / CH3CN) to afford the title product (5.5 mg, 18.17 % yield) as a white solid. ESI-MS (M+H) +: 436.3.1H NMR (400 MHz, CD3OD) δ 9.09 (s, 1H), 8.00 (s, 1H), 7.47 (d, J = 11.2 Hz, 1H), 6.58 (s, 1H), 4.10 (t, J = 8.4 Hz, 2H), 3.61 – 3.49 (m, 4H), 3.43 – 3.35 (m, 5H), 3.13 (t, J = 8.4 Hz, 2H), 2.53 (s, 3H), 2.26 – 2.04 (m, 1H), 1.21 – 1.08 (m, 2H), 1.03 (dd, J = 7.2, 3.6 Hz, 2H).
Example 93 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-5-methyl- 4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000321_0001
Step 1: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0572] A mixture of tert-butyl 4-(5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (100 mg, 0.31 mmol ), phenyl (8-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)carbamate (94 mg, 0.93 mmol) and TEA (94 mg, 0.93 mmol) in THF (5 mL) was stirred at 70 oC for 16 h. The mixture was concentrated and the residue was purified by silica gel column chromatography (PE: EA=1:1) to give the title compound (40 mg, yield: 25%) as a white solid. ESI-MS (M+H) +: 510.2.1H NMR (400 MHz, CDCl3) δ 11.59 (s, 1H), 8.78 (d, J = 1.5 Hz, 1H), 7.83 (s, 1H), 7.36 (d, J = 2.8 Hz, 1H), 6.81 (dd, J = 11.3, 1.6 Hz, 1H), 4.19 – 4.09 (m, 2H), 3.58 – 3.53 (m, 4H), 3.21 (t, J = 8.6 Hz, 2H), 3.12 – 3.05 (m, 4H), 2.45 (s, 3H), 2.21 (s, 3H), 1.49 (s, 9H). Step 2: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-5-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0573] To a solution of 4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-6-methyl-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.17 mmol) in DCM (1 mL) was added TFA (1 mL). The mixture was stirred at rt for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (9.5 mg, yield: 29%) as a white solid. ESI-MS (M+H)+:410.0.1H NMR (400 MHz, MeOD-d4) δ 9.19 (d, J = 1.2 Hz, 1H), 8.04 (s, 1H), 7.96 (dd, J = 10.9, 1.9 Hz, 2H), 4.17 – 4.11 (m, 2H), 3.45 – 3.41 (m, 4H), 3.40 – 3.33 (m, 6H), 2.55 (s, 3H), 2.28 (s, 3H). Example 94 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000322_0001
Step 1: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate. [0574] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1- carboxylate (203 mg, 0.67 mmol), 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (80 mg, 0.45 mmol), triphosgene (199 mg, 0.67 mmol) and TEA (136.3 mg, 1.35 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 100 %) to give title product (80 mg, 35.98) as a white solid. ESI-MS (M+H) +: 495.0.1H NMR (400 MHz, DMSO-d6) δ 11.47 (s, 1H), 8.84 (s, 1H), 8.08 (d, J = 5.6 Hz, 1H), 7.85 (s, 1H), 7.27 (d, J = 12.5 Hz, 1H), 6.93 (d, J = 5.6 Hz, 1H), 4.11 – 4.03 (m, 4H), 3.14 (t, J = 8.5 Hz, 2H), 2.86 – 2.72 (m, 3H), 2.33 (s, 3H), 1.74 – 1.68 (m, 2H), 1.58 – 1.50 (m, 2H), 1.42 (s, 9H). Step 2: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperidin-4-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0575] A mixture of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate (80 mg, 0.16 mmol) in TFA / DCM (0.5 mL / 5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (80.55 mg, yield: 82.23 %) as a white solid. ESI-MS (M+H) +: 395.1.1H NMR (400 MHz, DMSO-d6) δ 11.79 (s, 1H), 9.21 (s, 1H), 8.76 – 8.58 (m, 1H), 8.54 – 8.36 (m, 1H), 8.15 (d, J = 5.7 Hz, 2H), 7.94 (d, J = 11.7 Hz, 1H), 6.89 (d, J = 5.6 Hz, 1H), 4.12 – 4.08 (m, 2H), 3.41 (d, J = 11.7 Hz, 2H), 3.17 (t, J = 8.5 Hz, 2H), 3.08 – 2.92 (m, 3H), 2.45 (s, 3H), 1.93 – 1.80 (m, 4H). Example 101 – Preparation of (S)-N-(7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate (Compound 101).
Figure imgf000323_0001
Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0576] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.38 mol), 7-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-amine (67 mg, 0.45 mmol), triphosgene (133.65 mg, 0.45 mmol) and TEA (380.7 mg, 3.77 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at rt for 1h, the precipitate was filtered to afford title product (80 mg, 42.97 %) as a white solid. ESI-MS (M+H) +: 493.2.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 9.50 (s, 1H), 8.35 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.76 (s, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.21 – 4.16 (m, 1H), 4.02 (t, J = 8.6 Hz, 2H), 3.81 – 3.76 (m, 1H), 3.63 (dd, J = 27.5, 12.6 Hz, 2H), 3.21 – 3.13 (m, 3H), 3.11 – 3.06 (m, 1H), 2.99 – 2.92 (m, 1H), 2.52 (s, 3H), 1.43 (s, 9H), 1.18 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. A mixture of tert-butyl (S)-2-methyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl / EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (38.62 mg, yield: 61.57 %) as a yellow oil. ESI-MS (M+H) +: 393.1.1H NMR (400 MHz, DMSO-d6) δ 11.94 (s, 1H), 9.49 (s, 1H), 9.03 (s, 1H), 8.71 (s, 1H), 8.40 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 7.79 (s, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.06 – 4.05 (m, 2H), 3.82 (d, J = 12.6 Hz, 2H), 3.41 – 3.36 (m, 2H), 3.24 – 3.16 (m, 4H), 3.03 – 2.97 (m, 1H), 2.53 (s, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 125 – Preparation of (S)-N-(1-methyl-1H-benzo[d]imidazol-4-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 1
Figure imgf000324_0002
Figure imgf000324_0003
Figure imgf000324_0001
( c)2 step 1 step 2
Figure imgf000324_0004
Step 1: Preparation of N-(1-methyl-1H-benzo[d]imidazol-4-yl)-1,1-diphenylmethanimine. [0577] To a mixture of 4-bromo-1-methyl-1H-benzo[d]imidazole (2.5 g, 11.90 mmol), diphenylmethanimine (4.31 g, 23.81 mmol) and BINAP (1.48 g, 2.38 mmol) in 1,4-dioxane (30 mL) were added Cs2CO3 (7.76 g, 23.81 mmol) and Pd(OAc)2 (268.94 mg, 1.19 mmol). The mixture was stirred at 110 oC for 16 h under N2. The mixture was diluted with H2O (30 mL) and extracted with EA (30 mL x 3). The organic phase was washed with brine (30 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (1.2 g, 32.42%) as a brown solid. ESI-MS (M+H) +: 312.4. Step 2: Preparation of 1-methyl-1H-benzo[d]imidazol-4-amine hydrochloride. [0578] A mixture of N-(1-methyl-1H-benzo[d]imidazol-4-yl)-1,1-diphenylmethanimine (1.2 g, 3.86 mmol) in 4M HCl/EA (20 mL) was stirred at r.t for 5 h. The reaction was diluted with EA (20 mL), the precipitate was filtered and triturate with EA (20 mL) to give title product (600 mg, 84.94%) as a white solid. ESI-MS (M+H) +: 147.6. Step 3: Preparation of tert-butyl (S)-2-methyl-4-(1-((1-methyl-1H-benzo[d]imidazol-4- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0579] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 1-methyl-1H-benzo[d]imidazol-4- amine hydrochloride (86.32 mg, 0.47 mmol) in THF (10 mL) were added TEA (142.41 mg, 1.41 mmol) and triphosgene (278.24 mg, 0.94 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (10 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 34.67%) as a white solid. ESI-MS (M+H) +: 492.3. Step 4: Preparation of (S)-N-(1-methyl-1H-benzo[d]imidazol-4-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. To a mixture of tert-butyl (S)-2-methyl-4-(1-((1-methyl-1H-benzo[d]imidazol-4- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (15.31 mg, 21.85%) as a white solid. ESI-MS (M+H) +:392.2.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 8.27 (s, 1H), 8.15 (s, 1H), 8.08 – 8.03 (m, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.22 – 7.16 (m, 2H), 6.53 (d, J = 6.1 Hz, 1H), 4.05 – 4.00 (m, 2H), 3.84 (s, 3H), 3.66 – 3.64 (m, 2H), 3.17 – 3.11 (m, 2H), 3.02 – 2.83 (m, 4H), 2.61 – 2.54 (m, 1H), 1.07 (d, J = 6.3 Hz, 3H).
Example 145 – Preparation of (S)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 145).
Figure imgf000326_0001
Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0580] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine hydrochloride (86.48 mg, 0.47 mmol) in THF (5 mL) were added TEA (142.92 mg, 1.42 mmol) and triphosgene (278.24 mg, 0.94 mmol) (in THF (1 mL ) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=4:1) to give title product (80 mg, 34.60 %) as a white solid. ESI-MS (M+H) +:493.3. Step 2: Preparation of (S)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0581] A mixture of tert-butyl (S)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (6.57 mg, 9.38%) as a white solid. ESI-MS (M+H) +:393.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 9.25 (d, J = 1.3 Hz, 1H), 8.25 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.68 (d, J = 9.4 Hz, 1H), 7.59 (dd, J = 9.5, 2.0 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.01 – 3.96 (m, 2H), 3.64 – 3.61 (m, 2H), 3.17 – 3.12 (m, 2H), 3.00 – 2.96 (m, 1H), 2.88 – 2.55 (m, 4H), 2.44 (s, 3H), 1.05 (d, J = 6.3 Hz, 3H). Example 170 – Preparation of (S)-N-(2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 170).
Figure imgf000327_0001
Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0582] To a solution of 2-methyl-2H-indazol-5-amine (83 mg, 0.56 mmol) and TEA (572 mg, 5.65 mmol) in THF (12 mL) was added triphosgene (167 mg, 0.56 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (150 mg, 0.47 mmol) was added at 0 oC to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (40 mL). The precipitate was filtered and triturated with MeOH (7 mL) to give the compound (200 mg, 86.36 %) as a white solid. ESI-MS (M+H) +:492.2. Step 2: Preparation of (S)-N-(2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0583] To a mixture of tert-butyl (S)-2-methyl-4-(1-((2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (180 mg, 0.37 mmol) in EA (4 mL) was added HCl/EA (5 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (42 mg, Y: 29.30 %) as a yellow solid. ESI-MS (M+H) +:392.2.1H NMR (400 MHz, DMSO-d6) δ 11.74 (s, 1H), 8.34 (s, 1H), 8.22 (s, 1H), 7.99 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.56 (d, J = 9.1 Hz, 1H), 7.22 (dd, J = 9.1, 1.5 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.14 (s, 3H), 3.97 (t, J = 8.5 Hz, 2H), 3.69 – 3.60 (m, 2H), 3.14 – 2.96 (m, 5H), 2.91 (t, J = 10.7 Hz, 1H), 2.77 – 2.67 (m, 1H), 1.14 (d, J = 6.2 Hz, 3H). Example 176 – Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate (Compound 176).
Figure imgf000328_0001
Step 1: Preparation of tert-butyl 7-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0584] A mixture of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (90 mg, 0.43 mmol), TEA (132 mg, 1.30 mmol) and DPPA (239 mg, 0.87 mmol) in Tol (4 mL) was stirred at RT for 1 h, heated to 80 oC and stirred for 1h, tert-butyl 7-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (144 mg, 0.43 mmol) was added. The mixture was stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 2) to give title product (100 mg, Y: 42.0%) as a pink solid. ESI-MS (M+H) +: 534.2. Step 2: Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0585] A mixture of tert-butyl 7-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (80 mg, 0.15 mmol) in 4M HCl / EA (8 mL) was stirred at RT for 2 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (82 mg, Y: 99.9 %) as a pink solid. ESI-MS (M+H) +: 434.1.1H NMR (400 MHz, DMSO-d6) δ 12.26 (s, 1H), 9.32 (s, 2H), 8.30 (s, 1H), 8.23 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 6.60 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.06 – 3.98 (m, 2H), 3.96 (s, 3H), 3.56 (d, J = 5.3 Hz, 2H), 3.41 (s, 2H), 3.39 – 3.32 (m, 2H), 3.12 (t, J = 8.5 Hz, 2H), 2.31 (s, 3H), 1.05 (t, J = 6.2 Hz, 2H), 0.95 (t, J = 6.3 Hz, 2H). Example 177 – Preparation of N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (Compound 177).
Figure imgf000329_0001
Step 1: Preparation of tert-butyl 7-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0586] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (80 mg, 0.24 mmol), 6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-amine (62 mg, 0.29 mmol), and TEA (293 mg, 2.89 mmol) in THF (8 mL) was added triphosgene (86 mg, 0.29 mmol), the mixture was stirred at 0 oC for 15 min and stirred at RT for 16 h. The mixture was diluted with water, stirred at rt for 1 h. The precipitate was filtered to afford title product (50 mg, 37.5 %) as a yellow solid. ESI-MS (M+H) +: 535.2. Step 2: Preparation of N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0587] A mixture of tert-butyl 7-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (40 mg, 0.07 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (3.35 mg, yield: 11.06 %) as a white solid. ESI-MS (M+H) +: 435.0.1H NMR (400 MHz, DMSO-d6) δ 11.83 (s, 1H), 8.64 (s, 1H), 8.20 (s, 1H), 7.88 (dd, J = 11.8, 3.4 Hz, 2H), 6.49 (d, J = 6.2 Hz, 1H), 4.04 (s, 3H), 3.99 – 3.95 (m, 2H), 3.26 – 3.23 (m, 2H), 3.09 (d, J = 12.1 Hz, 4H), 2.88 – 2.84 (m, 2H), 2.31 (s, 3H), 0.50 (d, J = 11.1 Hz, 4H). Example 178 – Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate (Compiund 178).
Figure imgf000330_0001
Step 1: Preparation of tert-butyl 4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0588] A mixture of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (90 mg, 0.43 mmol), TEA (132 mg, 1.30 mmol) and DPPA (239 mg, 0.87 mmol) in Tol (4 mL) was stirred at RT for 1 h, heated to 70oC and stirred for 1h, tert-butyl 4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (133 mg, 0.43 mmol) was added. The mixture was stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 4) to give title product (100 mg, Y: 45.3%) as a yellow solid. ESI-MS (M+H) +: 508.2.1H NMR (400 MHz, DMSO-d6) δ 12.33 (s, 1H), 8.30 (s, 1H), 8.24 (s, 1H), 7.96 (d, J = 5.9 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.03 – 3.98 (m, 2H), 3.96 (s, 3H), 3.48 – 3.42 (m, 4H), 3.31 – 3.27 (m, 4H), 3.17 – 3.10 (m, 2H), 2.31 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0589] A mixture of tert-butyl 4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl / EA (8 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (80 mg, Y: 97.3 %) as a pink solid. ESI-MS (M+H) +: 408.1.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 8.88 (s, 2H), 8.31 (s, 1H), 8.23 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 6.61 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.07 – 3.99 (m, 2H), 3.96 (s, 3H), 3.55 – 3.46 (m, 4H), 3.28 – 3.19 (m, 4H), 3.17 – 3.08 (m, 2H), 2.31 (s, 3H). Example 179 – Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-6-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate (Compound 179).
Figure imgf000331_0001
Step 1: Preparation of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-6- methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0590] To a mixture of tert-butyl 4-(6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (70 mg, 0.22 mmol) and TEA (66.5 mg, 0.66 mmol) in THF (10 mL) was added triphosgene (131 mg, 0.44 mmol) at 0oC, the mixture was stirred at RT for 1 h.6-fluoro-2-methyl-2H-indazol-5-amine (36 mg, 0.22 mmol) was added. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 2) to give title product (50 mg, Y: 43.7%) as a white solid. ESI-MS (M+H) +: 510.2. Step 2: Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-6-methyl-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0591] A mixture of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-6- methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.08 mmol) in 4M HCl / EA (6 mL) was stirred at RT for 2 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (33 mg, Y: 80.3 %) as a white solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, DMSO-d6) δ 12.31 (s, 1H), 8.79 (s, 2H), 8.48 (d, J = 7.8 Hz, 1H), 8.30 (s, 1H), 7.48 (d, J = 12.3 Hz, 1H), 6.50 (s, 1H), 4.12 (s, 3H), 4.05 – 3.98 (m, 2H), 3.54 – 3.41 (m, 4H), 3.28 – 3.17 (m, 4H), 3.14 – 3.05 (m, 2H), 2.40 (s, 3H). Example 180 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(2-oxa-5,8- diazaspiro[3.5]nonan-8-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000332_0001
Step 1: Preparation of tert-butyl 8-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8-diazaspiro[3.5]nonane-5-carboxylate. [0592] To a solution of tert-butyl 8-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8- diazaspiro[3.5]nonane-5-carboxylate (120 mg, 0.35 mmol) in THF (10 mL) were added TEA (106 mg, 1.05 mmol) and phenyl (7-fluoro-2-methyl-2H-indazol-5-yl)carbamate (119 mg, 0.42 mmol). The reaction mixture was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and purified by (PE/EA=0/1) to give title product (40 mg, 21.48 %) as a yellow solid. ESI-MS (M+H) +: 538.2. Step 2: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(2-oxa-5,8- diazaspiro[3.5]nonan-8-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0593] To a solution of tert-butyl 8-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8-diazaspiro[3.5]nonane-5-carboxylate (40 mg, 0.07 mmol) in DCM (5 mL) was added ZnBr2 (158 mg, 0.70 mmol). The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (2.93 mg, 7.35 %) as a yellow solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, DMSO-d6) δ 11.75 (s, 1H), 9.69 (s, 2H), 8.37 (d, J = 2.7 Hz, 1H), 8.04 (d, J = 5.6 Hz, 1H), 7.74 (s, 1H), 7.26 (d, J = 13.0 Hz, 1H), 6.69 (d, J = 5.9 Hz, 1H), 4.68 (d, J = 7.5 Hz, 2H), 4.54 (d, J = 7.6 Hz, 2H), 4.17 (s, 3H), 4.07 – 4.02 (m, 2H), 3.74 – 3.71 (m, 2H), 3.38 – 3.36 (m, 2H), 3.31 – 3.28 (m, 2H), 3.23 – 3.18 (m, 2H). Example 181 – Preparation of N-(6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000333_0001
Step 1: Preparation of ethyl 2-bromo-5-fluoroisonicotinate. [0594] To a mixture of 2-bromo-5-fluoroisonicotinic acid (25 g, 113.66 mmol) in EtOH (500 mL) was added H2SO4 (46 g, 469.00 mmol). The mixture was stirred at 80 o C for 16 h. After the reaction in complete, cool to r.t and distill under reaction pressure to remove the solvent. The residue was dissolved in DCM (100 mL), followed by saturated aqueous sodium bicarbonate solution, wash with saturated bine, combine the organic phases, dry with anhydrous sodium sulfate, filtered, and concentrated in vacuo to give title product (26 g, 92%) as a white solid. ESI-MS (M+H) +: 248.1.1H NMR (400 MHz, CDCl3) δ 8.38 (d, J = 1.8 Hz, 1H), 7.93 (d, J = 5.2 Hz, 1H), 4.44 (q, J = 7.1 Hz, 2H), 1.42 (t, J = 7.1 Hz, 3H). Step 2: Preparation of ethyl 5-fluoro-2-(prop-1-yn-1-yl)isonicotinate. [0595] A solution of ethyl 2-bromo-5-fluoroisonicotinate (26 g, 104.84 mmol), trimethyl(prop-1-yn-1-yl)silane (41.2 g, 366.94 mmol), Pd(PPh3)4 (12 g, 10.48 mmol), CuI (6 g, 31.45 mmol) , TBAF (27 g, 94.36 mmol ) and TEA (31.8 g, 314.52 mmol) in toluene (500 mL) was stirred at r.t for 5 h. The mixture was diluted with water (500 mL) and extracted with EA (500 mL× 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The crude was purified by silica gel column chromatography (PE/EA= 3:1) to afford title product (15 g, Y: 68 %) as a yellow solid. ESI-MS (M+H) +: 208.1. 1H NMR (400 MHz, CDCl3) δ 8.50 (d, J = 2.2 Hz, 1H), 7.81 (d, J = 5.7 Hz, 1H), 4.43 (q, J = 7.1 Hz, 2H), 2.09 (s, 3H), 1.41 (t, J = 7.1 Hz, 3H). [0596] Step 3 and 4: Preparation of ethyl 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5- carboxylate. [0597] To a mixture of ethyl 5-fluoro-2-(prop-1-yn-1-yl)isonicotinate (11 g, 52.88 mmol) in trichloromethane (500 mL) was added and O-(mesitylsulfonyl) hydroxylamine (32 g, 237.98 mmol) in 0oC. The mixture was stirred at r.t for 16 h. The reaction mixture was concentrated in vacuo, the residue was diluted with DMF (500 mL), K2CO3 (14.6 g, 105.76 mmol) was added and stirred at r.t for 5 h. The mixture was concentration in vacuo. The crude was diluted with water (500 mL) and extracted with EA (500 mL ×3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The crude was purified by silica gel column chromatography (PE/EA= 5:1) to give title product (3.5 g, Y: 29 %) as a yellow solid. ESI-MS (M+H) +: 223.1.1H NMR (400 MHz, CDCl3) δ 8.35 (d, J = 5.8 Hz, 1H), 8.11 (d, J = 7.1 Hz, 1H), 6.50 (s, 1H), 4.43 (q, J = 7.1 Hz, 2H), 2.50 (s, 3H), 1.42 (dd, J = 9.1, 5.2 Hz, 3H). Step 5: Preparation of 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid. [0598] To a mixture of ethyl 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylate (500 mg, 2.25 mmol) in THF (5 mL) and water (70 mL) was added LiOH (108 mg, 4.50 mmol). The mixture was stirred at r.t for 2 h. The mixture was concentrated to remove THF. The aqueous phase was adjusted PH=5 by 1 M HCl. The precipitate was filtered and dried to give title product (200 mg, 45%) as a white solid. ESI-MS (M+H) +: 195.1.1H NMR (400 MHz, DMSO-d6) δ 8.92 (d, J = 6.3 Hz, 1H), 8.17 (d, J = 7.5 Hz, 1H), 6.66 (s, 1H), 2.41 (s, 3H). Step 6: Preparation of tert-butyl 7-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0599] To a solution of 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (130 mg, 0.60 mmol) in toluene (10 mL) were added TEA (121 mg, 1.20 mmol), DPPA (248 mg, 0.90 mmol). The mixture was stirred at r.t for 1 h and 70 o C for 1 h. Then tert-butyl 7-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (100 mg, yield: 63 %) as a white solid. ESI-MS (M+H) +:522.2.1H NMR (400 MHz, DMSO-d6) δ 8.90 (d, J = 6.3 Hz, 1H), 8.26 (d, J = 8.0 Hz, 1H), 7.88 (d, J = 6.0 Hz, 1H), 7.38 (t, J = 7.9 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 6.30 (s, 1H), 4.02 – 3.96 (m, 2H), 3.60 – 3.54 (m, 2H), 3.31 – 3.25 (m, 2H), 3.16 – 3.09 (m, 4H), 2.33 (s, 3H), 1.42 (s, 9H), 0.97 – 0.92 (m, 2H), 0.87 – 0.84 (m, 2H). Step 7: Preparation of N-(6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. To a solution of tert-butyl 7-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (80 mg, 0.15 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). [0600] The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (56.3 mg, 70%) as a colorless oil. ESI-MS (M+H) +:422.0.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.30 – 9.10 (m, 2H), 8.92 (d, J = 6.3 Hz, 1H), 8.26 (d, J = 8.0 Hz, 1H), 7.95 (d, J = 6.1 Hz, 1H), 6.62 (d, J = 6.2 Hz, 1H), 6.31 (s, 1H), 4.03 (t, J = 8.5 Hz, 2H), 3.58 (s, 2H), 3.43 (s, 2H), 3.39 – 3.30 (m, 2H), 3.14 (t, J = 8.5 Hz, 2H), 2.33 (s, 3H), 1.07 – 0.99 (m, 2H), 0.95 (t, J = 6.4 Hz, 2H). Example 182 – Preparation of N-(2,8-dimethylimidazo[1,2-b]pyridazin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000335_0001
Step 1: Preparation of 6-chloro-2,8-dimethylimidazo[1,2-b]pyridazine. [0601] A mixture of 6-chloro-4-methylpyridazin-3-amine (7 g, 48.76 mmol), 1- chloropropan-2-one (9022 mg, 97.51 mmol) and TEA (14774 mg, 146.28 mmol) in EtOH (80 mL) was stirred at 150 oC for 1h in a sealed tube. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=3:1) to provide title product (5 g, yield: 57%) as a white solid. ESI- MS (M+H)+: 182.1.1H NMR (400 MHz, DMSO-d6) δ 8.10 (s, 1H), 7.25 (s, 1H), 2.59 (s, 3H), 2.43 (s, 3H). Step 2: Preparation of methyl 2,8-dimethylimidazo[1,2-b]pyridazine-6-carboxylate. [0602] A mixture of 6-chloro-2,8-dimethylimidazo[1,2-b]pyridazine (500 mg, 2.75 mmol), Pd(OAc)2 (63 mg, 0.28 mmol), Xantphos (329 mg, 0.55 mmol) in TEA (5 mL) and MeOH (5 mL) was stirred at 70 oC for 16h under CO. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to provide title product (380 mg, yield: 67%) as a white solid. ESI-MS (M+H)+:206.1.1H NMR (400 MHz, DMSO-d6) δ 8.19 (s, 1H), 7.57 (d, J = 0.9 Hz, 1H), 3.93 (s, 3H), 2.60 (d, J = 0.7 Hz, 3H), 2.43 (s, 3H). Step 3: Preparation of 2,8-dimethylimidazo[1,2-b]pyridazine-6-carboxylic acid. [0603] To a solution of methyl 2,8-dimethylimidazo[1,2-b]pyridazine-6-carboxylate (350 mg, 1.70 mmol) in THF/MeOH/H2O (5 mL /1 mL /1 mL) was added LiOH (204 mg, 8.50 mmol). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was diluted with water (5 mL), extracted with EA (10 mL). The aqueous phase was adjusted pH to 5 by 1N HCl. The precipitate was filtered, washed with water (5 mL) and lyophilized to give title product (250 mg, 76%) as a white solid. ESI-MS (M+H)+ :192.1.1H NMR (400 MHz, DMSO-d6) δ 7.88 (s, 1H), 7.42 (s, 1H), 2.49 (s, 3H), 2.37 (s, 3H). Step 4: Preparation of tert-butyl 7-(1-((2,8-dimethylimidazo[1,2-b]pyridazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate 2,2,2-trifluoroacetate. [0604] To a solution of 2,8-dimethylimidazo[1,2-b]pyridazine-6-carboxylic acid (150 mg, 0.79 mmol) in Toluene (5 mL) were added TEA (239 mg, 2.37 mmol) and DPPA (543 mg, 1.98 mmol). The mixture was stirred at 30 oC for 1h. Then the mixture was stirred at 90 oC for another 1h. Tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (260 mg, 0.79 mmol) was added to the mixture and stirred at 90 oC for 16h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:4) to provide title product (100 mg, yield: 24%) as a brown solid. ESI-MS (M+H)+: 519.2. Step 5: Preparation of N-(2,8-dimethylimidazo[1,2-b]pyridazin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0605] To a solution of tert-butyl tert-butyl 7-(1-((2,8-dimethylimidazo[1,2-b]pyridazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (90 mg, 0.17 mmol) in DCM (1 mL) was added TFA (1 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep- HPLC (0.05% NH4HCO3 in H2O / ACN) and concentrated in vacuo and dissolved with 0.5M TFA. The solution was concentrated in vacuo to give (12.63 mg, yield: 18%) as a brown solid. ESI-MS (M+H)+: 419.0.1H NMR (400 MHz, DMSO-d6) δ 12.60 (s, 1H), 9.34 (s, 2H), 8.28 (s, 1H), 8.19 (s, 1H), 8.02 (d, J = 6.0 Hz, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.03 (t, J = 8.4 Hz, 2H), 3.63 – 3.57 (m, 2H), 3.44 (s, 2H), 3.39 – 3.32 (m, 2H), 3.15 (t, J = 8.4 Hz, 2H), 2.62 (s, 3H), 2.47 (s, 3H), 1.06 (t, J = 6.1 Hz, 2H), 0.94 (t, J = 6.2 Hz, 2H). Example 183 – Preparation of N-(2-cyclopropylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000337_0001
Step 1: Preparation of 2-cyclopropyl-6-nitroimidazo[1,2-a]pyridine. [0606] A mixture of 5-nitropyridin-2-amine (9 g, 65.43 mmol), 2-bromo-1-cyclopropylethan- 1-one (16 g, 98.15 mmol) and PPTS (1.64 g, 6.54 mmol) in IPA (100 mL) was stirred at 80 oC for 16 h. The precipitate was filtered and dried to give title product (10 g, 75.4%) as a yellow solid. ESI-MS (M+H) +: 204.1.1H NMR (400 MHz, DMSO-d6) δ 8.39 (d, J = 9.1 Hz, 1H), 8.27 (s, 1H), 7.94 (d, J = 9.5 Hz, 1H), 2.28 (s, 1H), 1.17 (d, J = 6.3 Hz, 2H), 0.99 (s, 2H). Step 2: Preparation of 2-cyclopropylimidazo[1,2-a]pyridin-6-amine. [0607] A mixture of 2-cyclopropyl-6-nitroimidazo[1,2-a]pyridine (2.0 g, 9.85 mmol) and Pd/C (200 mg) in EA / EtOH (20 mL / 4mL) was stirred at RT for 16 h under H2. The mixture was filtered and the filtrate was concentrated in vacuo to give title product (1.70 g, crude) as a black solid. ESI-MS (M+H) +: 174.1.1H NMR (400 MHz, DMSO-d6) δ 7.97 (s, 1H), 7.87 (s, 1H), 7.59 (d, J = 9.5 Hz, 1H), 7.43 – 7.37 (m, 1H), 5.74 (s, 2H), 2.16 – 2.07 (m, 1H), 1.13 – 1.07 (m, 2H), 0.93 – 0.87 (m, 2H). Step 3: Preparation of tert-butyl 7-(1-((2-cyclopropylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0608] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (343.3 mg, 1.04 mmol), 2-cyclopropylimidazo[1,2- a]pyridin-6-amine (150 mg, 0.87 mmol), triphosgene (310 mg, 1.04 mmol) and TEA (439.3 mg, 4.35 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE= 50 %) to give title product (40 mg, 7.25%) as a white solid. ESI-MS (M+H) +: 530.2.1H NMR (400 MHz, CDCl3) δ 11.70 (s, 1H), 8.94 (s, 1H), 7.88 (d, J = 6.0 Hz, 1H), 7.42 (d, J = 9.5 Hz, 1H), 7.31 (s, 1H), 7.03 – 6.98 (m, 1H), 6.32 (d, J = 6.1 Hz, 1H), 4.16 – 4.12 (m, 2H), 3.70 – 3.67 (m, 2H), 3.28 – 3.24 (m, 2H), 3.08 – 3.03 (m, 4H), 2.03 – 2.00 (m, 1H), 1.55 (s, 9H), 1.27 – 1.25 (m, 2H), 1.09 – 1.07 (m, 2H), 0.94 – 0.93 (m, 2H), 0.84 – 0.82 (m, 2H). Step 4: Preparation of N-(2-cyclopropylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0609] A mixture of tert-butyl 7-(1-((2-cyclopropylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (30 mg, 0.06 mmol) in TFA / DCM (1 mL / 1 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (28.49 mg, yield: 86.66 %) as a colorless oil. ESI-MS (M+H) +: 430.0.1H NMR (400 MHz, MeOD-d4) δ 9.31 – 9.28 (m, 1H), 8.02 – 7.89 (m, 3H), 7.78 – 7.71 (m, 1H), 6.77 – 6.65 (m, 1H), 4.25 – 4.14 (m, 2H), 3.79 – 3.67 (m, 2H), 3.52 (d, J = 6.0 Hz, 4H), 3.29 – 3.21 (m, 2H), 2.20 – 2.11 (m, 1H), 1.25 – 1.19 (m, 2H), 1.19 – 1.13 (m, 2H), 1.11 – 1.05 (m, 2H), 1.00 – 0.95 (m, 2H). Example 184 – Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate. HN Ph
Figure imgf000339_0001
Step 1: Preparation of 2-chloro-3-(difluoromethyl)pyridine. [0610] A mixture of 2-chloronicotinaldehyde (12 g, 84.8 mmol), DAST (38 g, 237.45 mmol) in DCM (100 mL) was stirred at RT for 4 h. The mixture was diluted with water (100 mL), extracted with DCM (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo to give title product (12 g, crude) as a yellow liquid. ESI-MS (M+H) +: 164.2.1H NMR (400 MHz, CDCl3) δ 8.52 (d, J = 4.8 Hz, 1H), 8.02 (d, J = 7.7 Hz, 1H), 7.39 (dd, J = 7.7, 4.8 Hz, 1H), 6.93 (t, J = 54.5 Hz, 1H). Step 2: Preparation of N-(3-(difluoromethyl)pyridin-2-yl)-1,1-diphenylmethanimine. [0611] A mixture of 2-chloro-3-(difluoromethyl)pyridine (12 g, 73.71 mmol), diphenylmethanimine (19.8 g,109.76 mmol), Pd(OAc)2 (1.64 g, 7.32 mmol) BINAP (9.1 g, 14.63 mmol) and Cs2CO3 (71 g, 219.51 mmol) in 1,4-dioxnae (200 mL) was stirred at 100 oC for 16 h under N2. The mixture was diluted with water (200 mL), extracted with EA (200 mL×3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 6 %) to give title product (18 g, yield: 79.87 %) as a yellow liquid. ESI-MS (M+H) +: 309.1.1H NMR (400 MHz, CDCl3) δ 8.23 (d, J = 3.7 Hz, 1H), 7.89 – 7.74 (m, 3H), 7.55 – 7.39 (m, 3H), 7.31 – 7.16 (m, 5H), 6.99 (dd, J = 10.3, 5.4 Hz, 1H), 6.86 (t, J = 45.1 Hz, 1H). Step 3: Preparation of 3-(difluoromethyl)pyridin-2-amine. [0612] A mixture of N-(3-(difluoromethyl)pyridin-2-yl)-1,1-diphenylmethanimine (17 g, 55.19 mmol) in HCl / EA (18 mL / 50 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was diluted with water (20 mL), adjusted pH to 7~8 by Na2CO3, extracted with EA (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 30 %) to give title product (5.7 g, yield: 71.23 %) as a white solid. ESI-MS (M+H) +: 145.2.1H NMR (400 MHz, CDCl3) δ 8.22 – 8.13 (m, 1H), 7.52 (d, J = 7.4 Hz, 1H), 6.75 – 6.40 (m, 2H), 4.98 (s, 2H). Step 4: Preparation of 5-bromo-3-(difluoromethyl)pyridin-2-amine. [0613] A mixture of 3-(difluoromethyl)pyridin-2-amine ( 5.5 g, 38.19 mmol) and NBS ( 8.16g, 45.83 mmol) in ACN (50 mL) was stirred at 0 oC for 1 h. The mixture was concentrated in vacu, the residue was diluted with water (100 mL), extracted with EA (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo to give title product (8.7 g, crude) as a yellow solid. ESI-MS (M+H) +: 222.9.1H NMR (400 MHz, CDCl3) δ 8.21 (s, 1H), 7.63 (s, 1H), 6.53 (t, J = 55.0 Hz, 1H), 4.93 (s, 2H). Step 5: Preparation of 6-bromo-8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridine. [0614] A mixture of 5-bromo-3-(difluoromethyl)pyridin-2-amine (6.9 g, 31.09 mmol), 1- bromo-1,1-dimethoxyethane (17.07 g, 93.28 mmol) and PPTS (1.56 g, 6.22 mmol) in IPA (50 mL) was stirred at 80 oC for 16 h. The precipitate was filtered and dried to give title product (7 g, 84.4 %) as a white solid. ESI-MS (M+H) +: 262.8.1H NMR (400 MHz, DMSO-d6) δ 9.39 (s, 1H), 8.25 (s, 1H), 8.12 (s, 1H), 7.59 – 7.28 (m, 1H), 2.51 (d, J = 2.0 Hz, 3H). Step 6: Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0615] A mixture of 6-bromo-8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridine (6 g, 23.8 mmol), diphenylmethanimine (5.01 g,27.69 mmol), Pd(OAc)2 (535 mg, 2.38 mmol), BINAP (2.96 g, 4.76 mmol) and Cs2CO3 (23 g, 71.4 mmol) in 1,4-dioxnae (100 mL) was stirred at 100 oC for 16 h under N2. The mixture was concentrated in vacuo. The residue was diluted with water (100 mL), extracted with DCM (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 32 %) to give title product (7 g, yield: 81.47 %) as a yellow oil. ESI-MS (M+H) +: 362.1. Step 7: Preparation of 8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-amine HCl salt. [0616] A mixture of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (7 g, 19.39 mmol) in 3M HCl / EA (100 mL) was stirred at RT for 16 h. The precipitate was filtered and dried to give title product (3 g, 78.53 %) as a white solid. ESI-MS (M+H) +: 198.0.1H NMR (400 MHz, DMSO-d6) δ 8.12 (s, 1H), 8.07 (d, J = 0.8 Hz, 1H), 7.69 – 7.40 (m, 2H), 5.88 (s, 2H), 2.45 (s, 3H). Step 8: Preparation of tert-butyl 7-(1-((8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0617] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (368.5 mg, 1.02 mmol), 8-(difluoromethyl)-2- methylimidazo[1,2-a]pyridin-6-amine (200 mg, 1.02 mmol), triphosgene (333.2 mg, 1.12 mmol) and TEA (515.1 mg, 5.10 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 80 %) to give title product (200 mg, crude) as a yellow solid. ESI-MS (M+H) +: 554.2. Step 9: Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0618] A mixture of tert-butyl 7-(1-((8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (200 mg, 0.36 mmol) in TFA / DCM (1 mL / 2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (86.94 mg, yield: 42.55 %) as a white solid. ESI-MS (M+H) +: 453.9.1H NMR (400 MHz, MeOD-d4) δ 9.42 (s, 1H), 8.23 (d, J = 1.2 Hz, 1H), 8.07 (d, J = 1.0 Hz, 1H), 7.98 (d, J = 6.5 Hz, 1H), 7.25 (t, J = 53.9 Hz, 1H), 6.74 (d, J = 6.5 Hz, 1H), 4.23 (t, J = 8.5 Hz, 2H), 3.84 – 3.73 (m, 2H), 3.59 (s, 2H), 3.54 – 3.50 (m, 2H), 3.30 – 3.27 (m, 2H), 2.57 (d, J = 0.8 Hz, 3H), 1.20 – 1.14 (m, 2H), 1.13 – 1.07 (m, 2H). [0619] (s, 3H). Example 185 – Preparation of N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000342_0001
Step 1: Preparation of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0620] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.31 mmol) in THF (5 mL) were added TEA (137 mg, 1.36 mmol), triphosgene (162 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 1 h.8-methoxy-2- methylimidazo[1,2-a]pyrazin-6-amine (92 mg, 0.54 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (100 mg, Y: 43.9 %) as a yellow solid. ESI-MS (M+H) +:509.3.1H NMR (400 MHz, DMSO-d6) δ 11.79 (s, 1H), 8.65 (s, 1H), 7.94 (d, J = 6.1 Hz, 1H), 7.87 (s, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.05 (s, 3H), 4.00 (t, J = 8.6 Hz, 2H), 3.47 – 3.43 (m, 4H), 3.31 – 3.27 (m, 4H), 3.14 (t, J = 8.5 Hz, 2H), 2.32 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0621] To a solution of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.20 mmol) in EA (3 mL) was added 4M HCl / EA (3 mL) at r.t. The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (83.43 mg, 81.2 %) as a white solid. ESI-MS (M+H)+:409.1.1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 8.92 – 8.80 (m, 3H), 8.10 (s, 1H), 7.99 (d, J = 6.1 Hz, 1H), 6.64 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 4.04 (t, J = 8.5 Hz, 2H), 3.53 – 3.48 (m, 4H), 3.26 – 3.20 (m, 4H), 3.16 (t, J = 8.4 Hz, 2H), 2.40 (s, 3H). Example 186 – Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- isopropyl-3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000343_0001
Step 1: Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-isopropyl-3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0622] To a mixture of (S)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.10 mmol), propan-2-one (56 mg, 0.98 mmol) and TEA (29 mg, 0.29 mmol) in MeOH (4 mL) was added NaBH3CN (29.71 mg, 0.49 mmol). The mixture was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (12 mg, Y: 27.20 %) as a yellow solid. ESI-MS (M+H) +: 452.2.1H NMR (400 MHz, MeOD-d4) δ 9.14 (s, 1H), 8.06 (s, 1H), 7.99 (dd, J = 11.5, 1.2 Hz, 1H), 7.94 (d, J = 6.7 Hz, 1H), 6.82 (d, J = 6.7 Hz, 1H), 4.28 (t, J = 8.5 Hz, 2H), 4.24 – 3.96 (m, 3H), 3.75 – 3.43 (m, 4H), 3.43 – 3.32 (m, 3H), 2.56 (s, 3H), 1.46 (dd, J = 10.3, 6.6 Hz, 6H), 1.34
Example 187 – Preparation of N-(2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000344_0001
Figure imgf000344_0002
Figure imgf000344_0003
Step 1: Preparation of 5-bromo-3-(trifluoromethyl)pyridin-2-amine. [0623] To a mixture of 3-(trifluoromethyl)pyridin-2-amine (10.0 g, 61.73 mmol) in ACN (100 mL) was added NBS (11.0 g, 61.73 mmol) at 0oC. The mixture was stirred at r.t for 2 h. The mixture was diluted with sodium sulfite solution (100 mL) and extracted with EA (100 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 4: 1) to get title product (8.0 g, Y: 53.8%) as a yellow solid. ESI-MS (M+H)+:241.0.1H NMR (400 MHz, DMSO-d6) δ 8.28 (d, J = 1.8 Hz, 1H), 7.91 (d, J = 2.2 Hz, 1H), 6.71 (s, 2H). Step 2: Preparation of 6-bromo-2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridine. [0624] To a mixture of 5-bromo-3-(trifluoromethyl)pyridin-2-amine (8.0 g, 33.20 mmol) in IPA (30 mL) were added 1-bromo-2,2-dimethoxypropane (9.7 g, 53.11 mmol) and PPTS (833 mg, 3.32 mmol). The mixture was stirred at 95oC for 5 h. The mixture was concentrated in vacuo, the residue was diluted with sat. NaOH (100 mL) and extracted with EA (100 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 5: 1) to get title product (8.2 g, Y: 88.5%) as a white solid. ESI-MS (M+H)+:278.9.1H NMR (400 MHz, DMSO-d6) δ 9.12 (d, J = 0.9 Hz, 1H), 7.84 (s, 1H), 7.76 (s, 1H), 2.39 (d, J = 0.7 Hz, 3H). Step 3: Preparation of N-(2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0625] To a mixture of 6-bromo-2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridine (7.7 g, 27.60 mmol) in 1,4-dioxane (100 mL) were added diphenylmethanimine (7.5 g, 41.40 mmol), BINAP (3.4 g, 5.52 mmol), Pd(OAc)2 (621 mg, 2.76 mmol) and Cs2CO3 (18.0 g, 55.20 mmol). The mixture was stirred at 80oC for 16 h under N2. The mixture was diluted with water (100 mL) and extracted with EA (100 mL*3), the organic layer was washed with brine (150 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 1) to get title product (6.0 g, Y: 57.4%) as a yellow solid. ESI-MS (M+H)+:380.2.1H NMR (400 MHz, DMSO-d6) δ 7.89 (s, 1H), 7.71 – 7.67 (m, 3H), 7.62 – 7.32 (m, 7H), 7.20 – 7.16 (m, 2H), 2.29 (s, 3H). Step 4: Preparation of 2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6-amine hydrochloride. [0626] To a mixture of N-(2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (5.5 g, 14.51 mmol) in EA (60 mL) was added 4 M HCl/EA (60 mL). The mixture was stirred at r.t for 2 h. The mixture was filtered and the residue was diluted with EA (30 mL). The mixture was stirred at r.t for 2 h and the precipitate was filtered to get title product (3.1 g, Y: 84.8%) as a white solid. ESI-MS (M+H)+:216.2. Step 5: Preparation of tert-butyl 7-(1-((2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0627] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) in THF (5 mL) were added TEA (92 mg, 0.91 mmol), triphosgene (108 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 1 h. Then 2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6-amine hydrochloride (78 mg, 0.36 mmol)was adde to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (100 mg, Y: 57.7 %) as a yellow solid. ESI-MS (M+H) +:572.4.1H NMR (400 MHz, DMSO-d6) δ 11.85 (s, 1H), 9.16 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.89 (s, 1H), 7.72 (s, 1H), 6.55 (d, J = 6.0 Hz, 1H), 3.98 (t, J = 8.5 Hz, 2H), 3.58 – 3.56 (m, 2H), 3.31 – 3.29 (m, 2H), 3.15 – 3.10 (m, 4H), 2.47 (s, 3H), 1.43 (s, 9H), 0.97 – 0.94 (m, 2H), 0.87 – 0.85 (m, 2H). Step 6: Preparation of N-(2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0628] To a solution of tert-butyl 7-(1-((2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (80 mg, 0.14 mmol) in EA (5 mL) was added 4M HCl / EA (5 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (39.3 mg, 48.0 %) as a white solid. ESI- MS (M+H)+:472.1.1H NMR (400 MHz, DMSO-d6) δ 11.77 (s, 1H), 9.42 – 9.17 (m, 3H), 8.08 – 7.96 (m, 3H), 6.67 (d, J = 5.1 Hz, 1H), 4.04 (t, J = 7.7 Hz, 2H), 3.65 – 3.57 (m, 2H), 3.49 – 3.43 (m, 2H), 3.40 – 3.34 (m, 2H), 3.17 (t, J = 7.4 Hz, 2H), 2.42 (s, 3H), 1.09 – 1.03 (m, 2H), 0.95 (t, J = 6.4 Hz, 2H). Example 188 – Preparation of N-(2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000346_0001
Step 1: Preparation of tert-butyl 4-(1-((2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0629] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.49 mmol) in THF (5 mL) were added TEA (499 mg, 4.93 mmol), triphosgene (175 mg, 0.59 mmol) at 0oC. The mixture was stirred at r.t for 1 h.2-methyl-8- (trifluoromethyl)imidazo[1,2-a]pyridin-6-amine (127 mg, 0.59 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (100 mg, Y: 37.2 %) as a yellow solid. ESI-MS (M+H) +:546.1. Step 2: Preparation of N-(2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0630] To a solution of tert-butyl 4-(1-((2-methyl-8-(trifluoromethyl)imidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.18 mmol) in EA (3 mL) was added 4M HCl / EA (3 mL) at r.t. The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (80.83 mg, 78.8 %) as a white solid. ESI-MS (M+H)+:446.1.1H NMR (400 MHz, DMSO-d6) δ 11.68 (s, 1H), 9.37 (s, 1H), 8.98 (s, 2H), 8.14 (s, 2H), 7.97 (d, J = 6.3 Hz, 1H), 6.70 (d, J = 6.2 Hz, 1H), 4.08 (t, J = 8.2 Hz, 2H), 3.60 – 3.53 (m, 4H), 3.26 – 3.19 (m, 6H), 2.45 (s, 3H). Example 189 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-6-(pyridin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide FA salt.
Figure imgf000347_0001
Step 1: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-(pyridin-2-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0631] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-chloro-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (500 mg, 1.06 mmol) and 2- (tributylstannyl)pyridine (507 mg, 1.40 mmol) in 1,4-dioxane (10 mL) were added LiCl (280 mg, 6.36 mmol) and Pd(PPh3)2Cl2 (80 mg, 0.11 mmol) at rt. Then the mixture was stirred at 100 ℃ for 16 h under N2. The reaction was diluted with EA (20 mL) and washed with water (20 mLx3) and brine (20 mL). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by silica gel chromatography (eluted with MeOH in DCM from 0% to 8 %) to afford title product (230 mg, 42.2 % yield) as a yellow solid. ESI-MS (M+H) +: 516.2. Step 2: Preparation of benzyl 4-(6-(pyridin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [0632] A mixture of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-(pyridin-2-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (230 mg, 0.45 mmol) in TFA (2 mL) and DCM (10 mL) was stirred at 25 ℃ for 2 h under N2. The mixture was concentrated and beated with ACN to afford the title product (100 mg, 54 % yield) as a yellow solid. ESI-MS (M+H) +: 416.2. Step 3: Preparation of benzyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-(pyridin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0633] To a solution of benzyl 4-(6-(pyridin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (100 mg, 0.24 mmol) in THF (10 mL) were added TEA (122 mg, 1.20 mmol) and TBC (86 mg, 0.29 mmol ) at 0 ℃ for 1 h under N2. Then the mixture was added 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine(60 mg, 0.36 mmol) and stirred at 70 ℃ for 16 h under N2. The reaction was diluted with EA (20 mL) and washed with water (20 mLx3) and brine (20 mL). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by silica gel chromatography (eluted with EA in PE from 0% to 100 %) to afford title product (44 mg, 30 % yield) as a yellow solid. ESI-MS (M+H) +: 607.2. Step 4: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-6- (pyridin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide FA salt. [0634] A mixture of benzyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 6-(pyridin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (44 mg, 0.07 mmol) in HBr (0.5 mL) and DCM (2 mL) was stirred at 25 ℃ for 0.5 h under N2. The crude product was purified by prep-HPLC (0.05% FA in H2O / ACN) to afford title product (5.96 mg, 17.5 % yield) as a yellow solid. ESI-MS (M+H) +: 473.2.1H NMR (400 MHz, MeOD-d4) δ 8.71 (d, J = 1.4 Hz, 1H), 8.67 – 8.63 (m, 1H), 8.43 (s, 1H), 8.11 (d, J = 8.0 Hz, 1H), 7.99 – 7.94 (m, 1H), 7.60 (d, J = 2.6 Hz, 1H), 7.49 – 7.45 (m, 1H), 7.44 (s, 1H), 7.03 – 6.97 (m, 1H), 4.10 (t, J = 8.4 Hz, 2H), 3.61 – 3.54 (m, 4H), 3.35 – 3.32 (m, 4H), 3.20 – 3.12 (m, 2H), 2.40 (s, 3H). Example 190 – Preparation of (S)-4-(3,4-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000349_0001
Step 1: Preparation of (S)-4-(3,4-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0635] To a solution of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.097 mmol) and (CH2O)n (26 mg, 0.29 mmol) in MeOH / THF (1 mL, 1:1) was added HOAC (29 mg, 0.29 mmol), the mixture was stirred at RT for 1 h. Then NaBH3CN (18 mg, 0.29 mmol) was added to the mixture and stirred at 50 oC for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (15.68 mg, yield: 30 %) as a yellow solid. ESI-MS (M+H) +: 424.2.1H NMR (400 MHz, DMSO-d6) δ 12.41 (s, 1H), 9.84 (s, 1H), 9.66 (d, J = 6.6 Hz, 1H), 8.15 (s, 1H), 8.06 (d, J = 10.1 Hz, 1H), 7.98 (d, J = 6.1 Hz, 1H), 6.69 (d, J = 6.1 Hz, 1H), 4.06 (t, J = 8.6 Hz, 2H), 3.98 – 3.90 (m, 2H), 3.59 – 3.53 (m, 1H), 3.39 – 3.33 (m, 1H), 3.23 – 3.19 (m, 2H), 3.07 – 2.95 (m, 1H), 2.90 – 2.87 (m, 2H), 2.45 (s, 3H), 1.33 (d, J = 6.3 Hz, 3H). Example 191 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- methyl-4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000350_0001
Step 1: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0636] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.60 mmol), 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine hydrochloride (141.9 mg, 0.66 mmol), triphosgene (216.8 mg, 0.73 mmol) and TEA (333.3 mg, 3.3 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH: DCM= 7 %) to give title product (80 mg, yield: 23.26 %) as a yellow solid. ESI-MS (M+H) +: 521.9.1H NMR (400 MHz, DMSO- d6) δ 11.97 (s, 1H), 9.19 (d, J = 7.4 Hz, 1H), 7.88 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.42 (d, J = 11.6 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.01 – 3.96 (m, 2H), 3.57 – 3.55 (m, 2H), 3.30 – 3.28 (m, 2H), 3.15 – 3.11 (m, 4H), 2.28 (s, 3H), 1.42 (s, 9H), 0.96 – 0.93 (m, 2H), 0.87 – 0.84 (m, 2H). Step 2: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide HCl salt. [0637] A mixture of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.13 mmol) in 3M HCl / EA (1 mL) was stirred at RT for 2 h. The precipitate was filtered to give title product (50 mg, crude) as a yellow solid. ESI-MS (M+H) +: 422.1.1H NMR (400 MHz, DMSO- d6) δ 12.44 (s, 1H), 9.94 (s, 2H), 9.70 – 9.65 (m, 1H), 8.17 (s, 1H), 8.07 (d, J = 10.0 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.65 (d, J = 6.4 Hz, 1H), 4.06 – 4.03 (m, 2H), 3.65 – 3.64 (m, 2H), 3.48 – 3.46 (m, 2H), 3.31 – 3.29 (m, 2H), 3.19 – 3.16 (m, 2H), 2.46 (s, 3H), 1.15 – 1.12 (m, 2H), 0.93 – 0.90 (m, 2H). Step 3: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-methyl-4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0638] A mixture of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate (50 mg, 0.12 mmol), (CH2O)n (32 mg, 0.36 mmol), NaBH3CN (21.6 mg, 0.36 mmol) and TEA (36.36 mg, 0.36 mmol) in MeOH (1 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (34.28 mg, yield: 46.40 %) as a yellow oil. ESI-MS (M+H) +: 436.0.1H NMR (400 MHz, DMSO-d6) δ 12.43 (s, 1H), 10.32 (s, 1H), 9.68 (d, J = 6.6 Hz, 1H), 8.17 (s, 1H), 8.09 (d, J = 10.0 Hz, 1H), 7.99 (d, J = 6.1 Hz, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.05 (t, J = 8.5 Hz, 2H), 3.84 – 3.68 (m, 3H), 3.59 – 3.41 (m, 2H), 3.19 (t, J = 8.5 Hz, 3H), 2.96 (s, 3H), 2.45 (d, J = 0.8 Hz, 3H), 1.30 – 1.17 (m, 2H), 0.97 – 0.95 (m, 2H). Example 192 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- ((3R,5S)-3,4,5-trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-
Figure imgf000351_0001
Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((3R,5S)-3,4,5- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0639] A mixture of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.09 mmol), ACOH (16.2 mg, 0.27 mmol) and (CHO)n (13.5 mg, 0.45 mmoL) in MeOH (3 mL) was stirred at 50℃ for 1 h. NaBH3CN (11.3 mg, 0.18 mmol) was added. The mixture was stirred at 50℃ for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (46.36 mg, Y: 88.9 %) as a yellow solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, DMSO-d6) δ 12.43 (s, 1H), 9.82 (s, 1H), 9.66 (d, J = 6.6 Hz, 1H), 8.15 (s, 1H), 8.08 (d, J = 10.0 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.69 (d, J = 6.2 Hz, 1H), 4.08 – 4.02 (m, 2H), 3.99 – 3.93 (m, 2H), 3.43 – 3.37 (m, 2H), 3.23 (t, J = 8.3 Hz, 2H), 3.16 – 3.06 (m, 2H), 2.88 (s, 3H), 2.45 (s, 3H), 1.37 (d, J = 6.3 Hz, 6H). Example 193 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000352_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [0640] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (1 g, 6.05 mmol) and tert-butyl (2R,6S)-2,6-dimethylpiperazine-1-carboxylate (4.1 g, 19.35 mmol) in DIEA (3 mL) was stirred at 140oCfor 48 h in a sealed tube. The mixture was concentrated in vacuo and purified by silica gel column (DCM : MeOH = 20 : 1) to give title product (1 g, Y:46.6%) as a yellow solid. ESI-MS (M+H) +: 333.5. Step 2: Preparation of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0641] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (200 mg, 0.60 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine hydrochloride (99.7 mg, 0.60 mmol) in THF (10 mL) were added TEA (181 mg, 1.8 mmol) and triphosgene (365 mg, 1.20 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo, the residue was purified by silica gel column (PE: EA = 1: 4) to give title product (100 mg, Y: 31.8%) as a white solid. ESI-MS (M+H) +: 524.2. Step 3: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0642] A mixture of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (30 mg, 0.06 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (27.37 mg, Y:88.7 %) as a yellow solid. ESI-MS (M+H) +: 424.3.1H NMR (400 MHz, DMSO-d6) δ 12.44 (s, 1H), 9.66 (d, J = 6.5 Hz, 1H), 9.27 (s, 1H), 8.67 (s, 1H), 8.16 (s, 1H), 8.08 (d, J = 10.0 Hz, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.70 (d, J = 6.1 Hz, 1H), 4.08 – 4.01 (m, 2H), 3.95 – 3.85 (m, 3H), 3.27 – 3.18 (m, 3H), 2.92 (t, J = 12.6 Hz, 2H), 2.45 (s, 3H), 1.27 (d, J = 6.3 Hz, 6H). Example 194 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000353_0001
Step 1: Preparation of tert-butyl (S)-(1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate. [0643] To a tert-butyl (S)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3- yl)(methyl)carbamate (150 mg, 0.47 mmol), 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (142 mg, 0.71 mmol) and TEA (142 mg, 1.41 mmol) in THF (10 mL) was added a solution of triphosgene (211 mg, 0.71 mmol) in THF (1 mL) dropwise to the mixture at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:4) to provide title product (120 mg, yield: 50%) as a green solid. ESI-MS (M+H)+:509.9.1H NMR (400 MHz, DMSO-d6) δ 12.16 (s, 1H), 9.20 (d, J = 7.4 Hz, 1H), 7.79 – 7.77 (m, 1H), 7.71 (s, 1H), 7.41 (d, J = 11.7 Hz, 1H), 6.24 (d, J = 6.2 Hz, 1H), 3.97 – 3.91 (m, 2H), 3.70 – 3.66 (m, 2H), 3.56 – 3.41 (m, 7H), 2.77 (s, 3H), 2.23 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0644] To a solution of tert-butyl (S)-(1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate (100 mg, 0.20 mmol) in DCM (1.5 mL) was added TFA (1.5 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (67 mg, yield: 82%) as a white solid. ESI-MS (M+H)+: 409.9.1H NMR (400 MHz, DMSO-d6) δ 12.62 (s, 1H), 9.66 (d, J = 6.4 Hz, 1H), 8.86 (s, 2H), 8.16 (s, 1H), 8.08 (d, J = 10.1 Hz, 1H), 7.84 (d, J = 6.1 Hz, 1H), 6.30 (d, J = 6.3 Hz, 1H), 4.02 (t, J = 8.7 Hz, 2H), 3.90 – 3.83 (m, 2H), 3.79 – 3.73 (m, 1H), 3.72 – 3.67 (m, 1H), 3.65 – 3.58 (m, 1H), 3.46 – 3.36 (m, 2H), 2.67 (t, J = 5.1 Hz, 3H), 2.45 (s, 3H), 2.34 – 2.27 (m, 1H), 2.18 – 2.09 (m, 1H).
Example 195 – Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000355_0001
Step 1: Preparation of tert-butyl (R)-(1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate. [0645] To a mixture of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)(methyl)carbamate (100 mg, 0.31 mmol) in THF (10 mL) were added 7- fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (76 mg, 0.38 mmol), TEA (784.3 mg, 7.75 mmol) and triphosgene (110 mg, 0.38 mmol) (in THF (0.5 mL )) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (70 mg, yield: 44 %) as a brown solid. ESI-MS (M+H) +:510.2.1H NMR (400 MHz, CDCl3) δ 12.32 (s, 1H), 9.17 (d, J = 7.1 Hz, 1H), 7.81 (d, J = 6.1 Hz, 1H), 7.56 (d, J = 7.9 Hz, 1H), 7.25 (s, 1H), 6.09 (d, J = 6.1 Hz, 1H), 4.09 (dd, J = 15.5, 7.2 Hz, 2H), 3.71 (dd, J = 15.8, 6.6 Hz, 2H), 3.59 – 3.32 (m, 7H), 2.83 (s, 3H), 2.41 (s, 3H), 1.49 (s, 9H). Step 2: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)pyrrolidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0646] To a mixture of tert-butyl (R)-(1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)(methyl)carbamate (70 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (29.15 mg, 39%) as a colorless oil. ESI-MS (M+H) +:410.1.1H NMR (400 MHz, MeOD-d4) δ 9.45 (s, 1H), 7.93 (s, 1H), 7.82 (s, 1H), 7.80 (d, J = 3.8 Hz, 1H), 6.42 (d, J = 6.5 Hz, 1H), 4.18 (t, J = 8.5 Hz, 2H), 3.97 (dd, J = 18.4, 8.0 Hz, 2H), 3.87 (dd, J = 16.6, 9.2 Hz, 2H), 3.77 (d, J = 5.4 Hz, 1H), 3.61 – 3.51 (m, 2H), 2.82 (s, 3H), 2.52 (s, 3H), 2.48 (dd, J = 14.1, 7.0 Hz, 1H), 2.28 (dd, J = 13.4, 5.7 Hz, 1H). Example 196 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000356_0001
Compound 196 Step 1: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate. [0647] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1- carboxylate (100 mg, 0.33 mmol), 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (71 mg, 0.33 mmol), triphosgene (147 mg, 0.50 mmol) and TEA (166.6 mg, 1.65 mmol) in THF (5 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 100 %) to give title product (50 mg, 30.67 %) as a yellow solid. ESI-MS (M+H) +: 495.2. Step 2: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperidin-4-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0648] A mixture of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperidine-1-carboxylate (40 mg, 0.08 mmol) in TFA / DCM (0.5 mL / 0.5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (19.04 mg, yield: 60.40 %) as a white solid. ESI-MS (M+H) +: 395.0.1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 9.69 (d, J = 6.7 Hz, 1H), 8.72 – 8.37 (m, 2H), 8.16 (d, J = 5.2 Hz, 2H), 8.09 (d, J = 9.7 Hz, 1H), 6.90 (d, J = 5.6 Hz, 1H), 4.12 (t, J = 8.9 Hz, 2H), 3.41 (d, J = 11.3 Hz, 2H), 3.19 (t, J = 8.4 Hz, 2H), 3.08 – 3.01 (m, 2H), 2.99 – 2.94 (m, 1H), 2.45 (s, 3H), 1.91 – 1.80 (m, 4H). Example 197 – Preparation of (S)-4-(4-(cyclopropylmethyl)-3-methylpiperazin-1-yl)-N- (7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000357_0001
Compound 197 Step 1: Preparation of (S)-4-(4-(cyclopropylmethyl)-3-methylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0649] To a solution of (S)-N-(7-fluoro-2-methylimidazo [1,2-a]pyridin-6-yl)-4- (3- methylpiperazin-1-yl) -2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide TFA (40 mg, 0.08 mmol, 0.2 mL) and cyclopropanecarbaldehyde (16 mg, 0.24 mmol) in MeOH / THF (2 mL, 1:1) was added TEA (48 mg, 0.48 mmol) at RT for 1 h. Then NaBH3CN (16 mg, 0.24 mmol) was added to the mixture and stirred at 50 oC for 16 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (23.91 mg, yield: 52 %) as a yellow solid. ESI-MS (M+H) +: 464.2.1H NMR (400 MHz, DMSO-d6) δ 12.43 (s, 1H), 9.67 (d, J = 6.8 Hz, 1H), 9.55 (s, 1H), 8.16 (s, 1H), 8.08 (d, J = 10.1 Hz, 1H), 7.99 (d, J = 6.2 Hz, 1H), 6.70 (d, J = 5.9 Hz, 1H), 4.09 – 4.04 (m, 2H), 3.97 – 3.93 (m, 2H), 3.49 – 3.43 (m, 2H), 3.30 – 3.18 (m, 5H), 3.14 – 3.04 (m, 2H), 2.45 (s, 3H), 1.35 (d, J = 6.3 Hz, 3H), 1.13 – 1.05 (m, 1H), 0.74 – 0.63 (m, 2H), 0.49 – 0.34 (m, 2H).
Example 198 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000358_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0650] To a solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (124 mg, 0.75 mmol) and TEA (190 mg, 1.88 mmol) in THF (15 mL) was added triphosgene (223 mg, 0.75 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (200 mg, 0.63 mmol) was added at 0oC to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (170 mg, 53.11 %) as a white solid. ESI-MS (M+H) +:510.2 Step 2: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0651] To a mixture of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (170 mg, 0.33 mmol) in EA (3 mL) was added HCl/EA (8 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with DCM:MeOH (8 mL, 10:1), then filtered and lyophilized to give title product (125 mg, 91.51 %) as an off-white solid. ESI-MS (M+H) +:410.2.1H NMR (400 MHz, D2O) δ 8.90 (d, J = 6.4 Hz, 1H), 7.74 (d, J = 7.2 Hz, 1H), 7.71 (s, 1H), 7.68 (d, J = 9.0 Hz, 1H), 6.75 (d, J = 7.3 Hz, 1H), 4.27 (t, J = 8.5 Hz, 2H), 4.09 (t, J = 11.6 Hz, 2H), 3.55 – 3.47 (m, 3H), 3.42 – 3.36 (m, 2H), 3.32 – 3.24 (m, 2H), 1.33 (d, J = 6.6 Hz, 3H). Example 199 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2- oxopiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt.
Figure imgf000359_0001
Step 1: Preparation of tert-butyl (2-(4-bromo-2-chloropyridin-3-yl)ethyl)carbamate. [0652] To a solution of 4-bromo-2-chloropyridine (7 g, 36.38 mmol) in THF (500 mL) was added LDA (2 M, 21.8 mL, 43.66 mmol) at -78 °C and the mixture was stirred at -78 °C for 1 h. Tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (9.7 g, 43.66 mmol) was added at -78 °C and the mixture was stirred at -78 °C for 2 h. The mixture was quenched with aqueous NH4Cl (400 mL) and extracted with EA (200 mL × 3) and the combined organic was washed with brine (500 mL) and dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by column flash chromatography (EA/PE = 1/5) to afford the product (5.5 g, 45.8% yield) as a white solid. ESI-MS (M+H) +: 335.0.1H NMR (400 MHz, DMSO-d6) δ 8.13 (d, J = 5.2 Hz, 1H), 7.71 (d, J = 5.2 Hz, 1H), 7.03 – 6.91 (m, 1H), 3.25 – 3.16 (m, 2H), 3.06 – 3.00 (m, 2H), 1.35 (s, 9H). Step 2: Preparation of tert-butyl 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate. [0653] To a solution of tert-butyl (2-(4-bromo-2-chloropyridin-3-yl)ethyl)carbamate (5.5 g, 16.42 mmol) in THF (100 mL) was added NaH (2.6 g, 65.67 mmol) and the reaction was stirred at 50 °C for 1 h. The mixture was quenched with ice water (250 mL) and extracted with EA (100 mL × 3) and the combined organic was washed with brine (300 mL) and dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by column flash chromatography (EA/PE = 1/5) to afford the product (2.3 g, 46.9% yield) as a white solid. ESI-MS (M+H) +: 299.0.1HNMR (400 MHz, DMSO-d6) δ 7.93 (d, J = 5.6 Hz, 1H), 7.13 (d, J = 5.6 Hz, 1H), 4.03 – 3.88 (m, 2H), 3.03 – 2.90 (m, 2H), 1.49 (s, 9H). Step 3: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)-2-oxopiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0654] To a solution of tert-butyl 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate (500 mg, 1.67 mmol) in 1,4-dioxane (20 mL) were added benzyl 3- oxopiperazine-1-carboxylate (392 mg, 1.67 mmol), Pd2(dba)3 (153 mg, 0.17 mmol), Xantphos (193 mg, 0.17 mmol) and K3PO4 (1.06 g, 5.01 mmol) and the reaction was stirred at 100 °C for 16 h. The mixture was concentrated to dryness and the crude product was purified by column flash chromatography (EA = 97%) to afford the product (370 mg, 48.8% yield) as a light-yellow solid. ESI-MS (M+H) +: 453.2.1HNMR (400 MHz, DMSO-d6) δ 8.10 (d, J = 5.6 Hz, 1H), 7.41 – 7.33 (m, 5H), 6.90 (d, J = 5.6 Hz, 1H), 5.14 (s, 2H), 4.16 (s, 2H), 3.94 – 3.87 (m, 2H), 3.73 (s, 4H), 2.90 – 2.80 (m, 2H), 1.49 (s, 9H). Step 4: Preparation of benzyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3- oxopiperazine-1-carboxylate. [0655] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)-2-oxopiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (370 mg, 0.82 mmol) in DCM (10 mL) was added TFA (3 mL) and the reaction was stirred at rt for 2 h. The mixture was poured into aqueous NH4HCO3 (30 mL), extracted with DCM (15 mL × 3) and the combined organic was washed with brine (50 mL) and dried over Na2SO4. The crude product was used next step without purification. ESI-MS (M+H) +: 353.1.1HNMR (400 MHz, DMSO-d6) δ 7.69 (d, J = 5.6 Hz, 1H), 7.42 – 7.32 (m, 5H), 6.49 (s, 1H), 6.36 (d, J = 5.6 Hz, 1H), 5.13 (s, 2H), 4.14 (s, 2H), 3.77 – 3.66 (m, 4H), 3.49 – 3.39 (m, 2H), 2.89 – 2.75 (m, 2H). Step 5: Preparation of 4-nitrophenyl 4-(4-((benzyloxy)carbonyl)-2-oxopiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0656] To a solution of benzyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3- oxopiperazine-1-carboxylate (381 mg, 1.08 mmol) in THF (20 mL) was added TEA (327 mg, 3.24 mmol), then 4-nitrophenyl carbonochloridate (261 mg, 1.29 mmol) was added at 0 °C and the reaction was stirred at rt for 16 h. The mixture was poured into water (100 mL), extracted with EA (25 mL × 3) and the combined organic was washed with brine (100 mL) and dried over Na2SO4. The crude product was purified by column flash chromatography (EA/PE = 1/1) to afford the product (300 mg, 53.7% yield) as a white solid. ESI-MS (M+H) +: 518.2.1HNMR (400 MHz, DMSO-d6) δ 8.40 – 8.28 (m, 2H), 8.21 (d, J = 5.6 Hz, 1H), 7.60 – 7.51 (m, 2H), 7.44 – 7.30 (m, 5H), 7.05 (d, J = 5.6 Hz, 1H), 5.15 (s, 2H), 4.28 – 4.12 (m, 4H), 3.78 (s, 4H), 3.08 – 2.93 (m, 2H). Step 6: Preparation of benzyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3-oxopiperazine-1-carboxylate. [0657] To a solution of 4-nitrophenyl 4-(4-((benzyloxy)carbonyl)-2-oxopiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (223 mg, 0.43 mmol) in DMF (20 mL) were added 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (92 mg, 0.56 mmol), HOBT (87 mg, 0.64 mmol) and Et3N (217 mg, 2.15 mmol) and the reaction was stirred at rt for 16 h. The mixture was poured into water (200 mL), extracted with EA (35 mL × 3) and the combined organic was washed with brine (500 mL) and dried over Na2SO4. The crude product was purified by column flash chromatography (DCM/MeOH = 10/1) to afford the product (115 mg, 49% yield) as a red solid. ESI-MS (M+H) +: 544.2. Step 7: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2-oxopiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt. [0658] To a solution of benzyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3-oxopiperazine-1-carboxylate (80 mg, 0.15 mmol) in DCM (4 mL) was added HBr/HOAc (2 mL) and the reaction was stirred at rt for 1 h. The mixture was poured into aqueous NH4HCO3 (30 mL), extracted with DCM (10 mL × 3) and the combined organic was washed with brine (50 mL) and dried over Na2SO4. The crude product was purified by Prep-HPLC (0.1% TFA in H2O and ACN) to afford the product (1.15 mg, 2% yield) as a white solid. ESI-MS (M+H) +: 410.2.1HNMR (400 MHz, DMSO-d6) δ 11.90 (s, 1H), 9.59 (s, 1H), 9.30 (s, 1H), 8.25 (d, J = 5.5 Hz, 1H), 8.09 (s, 1H), 8.02 – 7.91 (m, 1H), 7.05 (d, J = 5.8 Hz, 1H), 4.16 – 4.11 (m, 2H), 3.96 (s, 2H), 3.90 – 3.87 (m, 2H), 3.58 – 3.56 (m, 2H), 3.04 – 2.99 (m, 2H), 2.43 (s, 3H). Example 200 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (3,3,5,5-tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000362_0001
Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3,3,5,5- tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0659] To a solution of 4-(3,3,5,5-tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (100 mg, 0.38 mmol) and 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (95 mg, 0.58 mmol) in THF (10 mL) were added TEA (2 mL) and a solution of triphosgene (171 mg, 0.58 mmol) in THF (1 mL) dropwise to the mixture at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to provide title product (42 mg, yield: 25%) as a white solid. ESI-MS (M+H)+: 451.9.1H NMR (400 MHz, DMSO-d6) δ 9.62 (d, J = 6.3 Hz, 1H), 8.11 (s, 1H), 8.04 – 7.94 (m, 2H), 6.71 (d, J = 6.1 Hz, 1H), 4.07 (t, J = 8.3 Hz, 2H), 3.34 (s, 4H), 3.26 (t, J = 8.7 Hz, 2H), 2.45 (s, 3H), 1.44 (s, 12H). Example 201 – Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000362_0002
Step 1: Preparation of tert-butyl 4-(1-((8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0660] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol), 8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- amine (90.8 mg, 0.39 mmol), triphosgene (115.8 mg, 0.39 mmol) and TEA (166 mg, 1.65 mmol) in THF (5 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. the mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 97.5 %) to give title product (28 mg, 16.06%) as a yellow solid. ESI-MS (M+H) +: 528.1. Step 2: Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0661] A mixture of tert-butyl 4-(1-((8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (28 mg, 0.03 mmol) in TFA / DCM (1 mL / 1 mL) was stirred at RT for 2 h. the mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (20.80 mg, yield: 97.42 %) as a colorless oil. ESI-MS (M+H) +: 428.1.1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 9.43 (s, 1H), 8.87 (s, 2H), 8.20 (s, 1H), 8.12 (s, 1H), 7.99 (d, J = 6.1 Hz, 1H), 7.44 (t, J = 53.8 Hz, 1H), 6.67 (d, J = 6.2 Hz, 1H), 4.07 – 4.03 (m, 2H), 3.54 – 3.50 (m, 4H), 3.25 – 3.16 (m, 6H), 2.48 (s, 3H). Example 202 – Preparation of N-(2-cyclopropylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000363_0001
Step 1: Preparation of tert-butyl 4-(1-((2-cyclopropylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0662] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol), 2-cyclopropylimidazo[1,2-a]pyridin-6-amine (67 mg, 0.39 mmol), triphosgene (115.8 mg, 0.39 mmol) and TEA (166 mg, 1.65 mmol) in THF (5 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. the mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 100 %) to give title product (40 mg, crude) as a yellow solid. ESI-MS (M+H) +: 504.1. Step 2: Preparation of N-(2-cyclopropylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0663] A mixture of tert-butyl 4-(1-((2-cyclopropylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (30 mg, 0.06 mmol) in TFA / DCM (1 mL / 1 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (4.92 mg, yield: 20.29 %) as a yellow oil. ESI-MS (M+H) +: 404.1.1H NMR (400 MHz, MeOD-d4) δ 9.28 (s, 1H), 7.98 (d, J = 6.4 Hz, 1H), 7.94 – 7.91 (m, 2H), 7.76 (d, J = 9.6 Hz, 1H), 6.73 (d, J = 6.4 Hz, 1H), 4.21 (t, J = 8.5 Hz, 2H), 3.69 – 3.64 (m, 4H), 3.41 – 3.38 (m, 4H), 3.30 – 3.27 (m, 2H), 2.18 – 2.12 (m, 1H), 1.24 – 1.19 (m, 2H), 1.00 – 0.96 (m, 2H). Example 203 – Preparation of N-(4-cyano-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000364_0001
Step 1: Preparation of tert-butyl 4-(1-((4-cyano-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0664] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) and 5-amino-2-methyl-2H-indazole-4-carbonitrile (56.7 mg, 0.33 mmol) in THF (8 mL) were added TEA (100 mg, 0.99 mmol) and triphosgene (196 mg, 0.66 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was diluted with water (10 mL), extracted with DCM (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 1: 5) to give title product (90 mg, Y: 54.5%) as a yellow solid. ESI-MS (M+H) +: 503.2. Step 2: Preparation of N-(4-cyano-2-methyl-2H-indazol-5-yl)-4-(piperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0665] A mixture of tert-butyl 4-(1-((4-cyano-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.14 mmol) in DCM (4 mL) and TFA (2 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (46.31 mg, Y: 82.6%) as a white solid. ESI-MS (M+H) +: 403.4.1H NMR (400 MHz, DMSO-d6) δ 12.76 (s, 1H), 8.88 (s, 2H), 8.51 (s, 1H), 8.24 (d, J = 8.9 Hz, 1H), 7.97 (d, J = 9.6 Hz, 1H), 7.91 (d, J = 6.1 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.20 (s, 3H), 4.10 – 4.00 (m, 2H), 3.54 – 3.51 (m, 4H), 3.28 – 3.21 (m, 4H), 3.21 – 3.14 (m, 2H). Example 204 – Preparation of N-(2,8-dimethylimidazo[1,2-b]pyridazin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000365_0001
Step 1: Preparation of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-b]pyridazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0666] To a solution of 2,8-dimethylimidazo[1,2-b]pyridazine-6-carboxylic acid (40 mg, 0.21 mmol) in Toluene (5 mL) were added TEA (64 mg, 0.63 mmol) and DPPA (144 mg, 0.53 mmol). The mixture was stirred at 30 oC for 1h. Then the mixture was stirred at 90 oC for another 1h. tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (64 mg, 0.21 mmol) was added to the mixture and stirred at 90 oC for 16h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:5) to provide title product (40 mg, yield: 39%) as a white solid. ESI-MS (M+H)+: 493.2. Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-b]pyridazin-6-yl)-4-(piperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide2,2,2-trifluoroacetate. [0667] To a solution of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-b]pyridazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.15 mmol) in DCM (1.5 mL) was added TFA (1.5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC(0.05% NH4HCO3 in H2O / ACN) and concentrated in vacuo and dissolved with 0.5M TFA. The solution was concentrated in vacuo to give title compound (1.57 mg, yield: 0.03%) as a white solid. ESI-MS (M+H)+: 393.1.1H NMR (400 MHz, MeOD-d4) δ 8.53 (d, J = 1.1 Hz, 1H), 8.05 – 8.01 (m, 2H), 6.67 (d, J = 6.1 Hz, 1H), 4.18 – 4.12 (m, 2H), 3.59 – 3.55 (m, 4H), 3.40 – 3.37 (m, 4H), 3.22 (t, J = 8.5 Hz, 2H), 2.69 (d, J = 1.0 Hz, 3H), 2.58 (d, J = 0.7 Hz, 3H). Example 205 – Preparation of N-(7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000366_0001
Step 1: Preparation of 4-cyclopropylpyridin-2-amine. [0668] To a mixture of 4-bromopyridin-2-amine (12 g, 0.070 mol), cyclopropylboronic acid (7.20 g, 0.084 mol) in 1,4-dioxane (120 mL) and H2O (10 mL) were added K2CO3 (19.32 g, 0.14 mmol) and Pd(dppf)Cl2 (2.88 g, 7.0 mmol). The mixture was stirred at 90 oC for 12 h under N2. The mixture was diluted with H2O (100 mL) and extracted with EA (100 mL x 3). The organic phase was washed with brine (100 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (9.0 g, 85.29%) as a white solid. ESI- MS (M+H) +: 135.0.1H NMR (400 MHz, DMSO-d6) δ 7.72 (d, J = 5.3 Hz, 1H), 6.20 (d, J = 13.2 Hz, 1H), 6.16 (d, J = 3.3 Hz, 1H), 5.68 (s, 2H), 1.79 – 1.64 (m, 1H), 1.00 – 0.88 (m, 2H), 0.70 – 0.59 (m, 2H). Step 2: Preparation of 5-bromo-4-cyclopropylpyridin-2-amine. [0669] To a mixture of 4-cyclopropylpyridin-2-amine (8.0 g, 0.060 mol) in CAN (80 mL) was added NBS (10.63 g, 0.060 mmol). The mixture was stirred at r.t for 2 h. The mixture was diluted with H2O (80 mL) and extracted with EA (80 mL x 3). The organic phase was washed with brine (80 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (4.50 g, 35.38%) as a yellow solid. ESI-MS (M+H) +:213.1.1H NMR (400 MHz, DMSO-d6) δ 7.90 (d, J = 6.0 Hz, 1H), 6.03 (s, 1H), 5.93 (s, 2H), 2.02 – 1.93 (m, 1H), 1.04 – 0.97 (m, 2H), 0.66 – 0.60 (m, 2H). Step 3: Preparation of 6-bromo-7-cyclopropyl-2-methylimidazo[1,2-a]pyridine. [0670] A mixture of 5-bromo-4-cyclopropylpyridin-2-amine (5.0 g, 0.024 mol), 1- chloropropan-2-one (2.65 g, 0.029 mmol) in IPA (50 mL) was stirred at 100 oC for 16 h. The mixture was concentrated in vacuo, the residue was adjusted pH~9 by 2M NaOH (100 mL) and stirred at r.t for 1h. Then extracted with EA (30 mLx2). The organics were washed with water (30 mL) and brine (30 mL), concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (5.0 g, 83.33%) as a yellow solid. ESI-MS (M+H) +: 253.0. Step 4: Preparation of N-(7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0671] To a mixture of 6-bromo-7-cyclopropyl-2-methylimidazo[1,2-a]pyridine (5.0 g, 0.02 mol), diphenylmethanimine (5.43 g, 0.03 mol) and BINAP (2.49 g, 4.0 mol) in 1,4-dioxane (50 mL) were added Cs2CO3 (13.04 g, 0.04 mol) and Pd(OAc)2 (0.45 mg, 2.0 mmol). The mixture was stirred at 120 oC for 16 h under N2. The mixture was diluted with H2O (50 mL) and extracted with EA (50 mL x 3). The organic phase was washed with brine (50 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (3.0 g, 42.74%) as a white solid. ESI-MS (M+H) +: 354.0. Step 5: Preparation of 7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride. [0672] A mixture of N-(7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (3.0 g, 0.19 mmol) in 3M HCl/EA (30 mL) was stirred at rt for 3 h. The precipitate was filtered and dried in vacuo to give title product (1.0 g, Y: 28.2%) as a yellow solid. ESI-MS (M+H+): 188.2. Step 6: Preparation of tert-butyl 7-(1-((7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0673] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol) and 7-cyclopropyl-2- methylimidazo[1,2-a]pyridin-6-amine hydrochloride (125.29 mg, 0.67 mmol) in THF (10 mL) were added TEA (184.83 mg, 1.83 mmol) and triphosgene (437.68 mg, 1.53 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with water (5 mL), the precipitate was filtered and dried in vacuo to give crude title product (100 mg, Y: 30.19 %) as a yellow solid. ESI-MS (M+H)+: 544.1. Step 7: Preparation of N-(7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0674] A mixture of tert-butyl 7-(1-((7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (100 mg,0.18 mmol) in 3M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (16 mg, 13.12%) as a brown oil. ESI-MS (M+H) +: 444.2.1H NMR (400 MHz, MeOD-d4) δ 9.22 (s, 1H), 8.45 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 7.57 (s, 1H), 7.23 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.08 (t, J = 8.6 Hz, 2H), 3.40 – 3.37 (m, 2H), 3.21 (s, 2H), 3.15 – 3.09 (m, 4H), 2.40 (s, 3H), 2.12 – 2.04 (m, 1H), 1.24 – 1.17 (m, 2H), 0.85 – 0.80 (m, 2H), 0.78 – 0.71 (m, 4H). Example 206 – Preparation of N-(4-cyano-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000369_0001
Compound 206 Step 1: Preparation of 5-((diphenylmethylene)amino)-2-methyl-2H-indazole-4-carbonitrile. [0675] To a mixture of 5-bromo-2-methyl-2H-indazole-4-carbonitrile (1 g, 4.26 mmol), diphenylmethanimine (1.54 g, 8.51 mmol) and BINAP (530.80 mg, 0.85 mmol) in 1,4- dioxane (10 mL) were added Cs2CO3 (2.78 g, 8.52 mmol) and Pd(OAc)2 (97.18 mg, 0.43 mmol). The mixture was stirred at 100 oC for 16 h under N2. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (10 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (1.0 g, 69.95%) as a brown solid. ESI-MS (M+H) +: 337.2. Step 2: Preparation of 5-amino-2-methyl-2H-indazole-4-carbonitrile hydrochloride. [0676] A mixture of 5-((diphenylmethylene)amino)-2-methyl-2H-indazole-4-carbonitrile (1.0 g, 2.98 mmol) in 4M HCl/EA (10 mL) was stirred at r.t for 2 h. The precipitate was filtrated and concentrated in vacuo to give title product (500 mg, 80.67%) as a yellow solid. ESI-MS (M+H) +: 173.2. Step 3: Preparation of tert-butyl 7-(1-((4-cyano-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0677] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.45 mmol) and 5-amino-2-methyl-2H- indazole-4-carbonitrile HCl salt (78 mg, 0.45 mmol) in THF (10 mL) were added TEA (137.4 mg, 1.36 mmol) and triphosgene (267 mg, 0.90 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was diluted with water (10 mL), extracted with DCM (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 1: 5) to give title product (80 mg, Y: 33.3%) as a yellow solid. ESI-MS (M+H) +: 529.2. Step 4: Preparation of N-(4-cyano-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0678] A mixture of tert-butyl 7-(1-((4-cyano-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (60 mg, 0.11 mmol) in DCM (4 mL) and TFA (2 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (25.07 mg, Y: 51.3%) as a white solid. ESI-MS (M+H) +: 429.4.1H NMR (400 MHz, DMSO-d6) δ 12.80 (s, 1H), 9.22 (s, 2H), 8.50 (s, 1H), 8.26 (d, J = 9.5 Hz, 1H), 7.97 (d, J = 9.5 Hz, 1H), 7.91 (d, J = 6.0 Hz, 1H), 6.64 (d, J = 6.1 Hz, 1H), 4.20 (s, 3H), 4.07 – 3.99 (m, 2H), 3.62 – 3.57 (m, 2H), 3.46 – 3.42 (m, 4H), 3.21 – 3.10 (m, 2H), 1.09 – 1.00 (m, 2H), 1.00 – 0.93 (m, 2H). Example 207 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000370_0001
Step 1: Preparation of tert-butyl 7-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0679] To a mixture of 2,8-dimethylimidazo[1,2-a]pyrazin-6-amine hydrochloride (150 mg, 0.73 mmol) in THF (20 mL) were added TEA (1.2 g, 12.20 mmol), triphosgene (217 mg, 0.73 mmol) and stirred at 0℃ for 5 min, then tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol) was added slowly at 0℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (100 mg, yield: 31 %) as a white solid. ESI-MS (M+H) +:519.0.1H NMR (400 MHz, CDCl3) δ 12.02 (s, 1H), 8.85 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.39 (s, 1H), 6.33 (d, J = 6.1 Hz, 1H), 4.17 – 4.11 (m, 2H), 3.75 – 3.66 (m, 2H), 3.30 – 3.23 (m, 2H), 3.11 – 3.00 (m, 4H), 2.84 (s, 3H), 2.49 (s, 3H), 1.48 (s, 9H), 1.08 (t, J = 6.2 Hz, 2H), 0.84 (t, J = 6.3 Hz, 2H). [0680] Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0681] To a mixture of tert-butyl 7-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.19 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered, washed with EA (5 mL) and dried in vacuo to give title product (36.32 mg, 42 %) as a white solid. ESI-MS (M+H) +:419.2.1H NMR (400 MHz, DMSO-d6) δ 12.25 (s, 1H), 9.80 (s, 2H), 9.21 (s, 1H), 8.28 (s, 1H), 8.01 (d, J = 6.1 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.06 – 4.02 (m, 2H), 3.64 – 3.60 (m, 2H), 3.47 – 3.42 (m, 2H), 3.33 – 3.28 (m, 2H), 3.18 – 3.11 (m, 2H), 2.80 (s, 3H), 2.52 (s, 3H), 1.12 (t, J = 6.1 Hz, 2H), 0.92 (t, J = 6.3 Hz, 2H).
Example 208 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2- oxa-5,8-diazaspiro[3.5]nonan-8-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000372_0001
Step 1: Preparation of tert-butyl (2-(4-bromo-2-fluoropyridin-3-yl)ethyl)carbamate. [0682] To a solution of 4-bromo-2-fluoropyridine (12 g, 68.18 mmol) in THF (100 mL) was added LDA (51 mL, 102.27 mmol) at -78°C. The mixture was stirred at -78°C for 1 h. Then tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (22.8 g, 102.27 mmol) was added and the reaction mixture was stirred at rt for 16 h. The reaction mixture was quenched with aqueous NH4Cl and extracted with EtOAc (200 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo to give title compound (20 g, 91.95 % yield) a yellow solid. ESI-MS (M+H-56) +: 264.9.1H NMR (400 MHz, DMSO-d6) δ 8.04 (d, J = 5.3 Hz, 1H), 7.68 (d, J = 5.3 Hz, 1H), 7.06 – 6.97 (m, 1H), 3.24 – 3.19 (m, 2H), 2.93 (t, J = 6.6 Hz, 2H), 1.39 (s, 9H). Step 2: Preparation of 2-(4-bromo-2-fluoropyridin-3-yl)ethan-1-amine hydrochloride. [0683] To a solution of tert-butyl (2-(4-bromo-2-fluoropyridin-3-yl)ethyl)carbamate (20 g, 62.70 mmol) in EtOAc (20 mL) was added 4 M HCl / EA (200 mL). The mixture was stirred at RT for 5 h. The precipitate was filtered, washed with EA (50 mL) and concentrated in vacuo to give title product (15 g, 93.75 %) as a white solid. ESI-MS (M+H) +: 220.9.1H NMR (400 MHz, DMSO-d6) δ 8.37 – 8.15 (m, 3H), 8.06 (d, J = 5.3 Hz, 1H), 7.69 (d, J = 5.4 Hz, 1H), 3.12 – 3.04 (m, 2H), 3.01 – 2.92 (m, 2H). Step 3: Preparation of 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [0684] To a solution of 2-(4-bromo-2-fluoropyridin-3-yl)ethan-1-amine hydrochloride (1 g, 4.57 mmol) in DMF (10 mL) was added K2CO3 (1.9 g, 13.71 mmol). The mixture was stirred at 70 oC for 16 h. The reaction mixture was diluted with H2O (20 mL), extracted with EA (20 mL×2). The organic phase was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo to give title product (850 mg, 93.54 % yield) as a white solid. ESI-MS (M+H) +: 201.0.1H NMR (400 MHz, DMSO-d6) δ 7.99 (d, J = 5.5 Hz, 1H), 7.23 (d, J = 5.6 Hz, 1H), 3.98 (t, J = 8.5 Hz, 2H), 3.00 (t, J = 8.5 Hz, 2H). Step 4: Preparation of 1-(4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl)ethan-1-one. [0685] To a solution of 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (850 mg, 4.27 mmol) in DCM (10 mL) were added TEA (1.3 g, 12.81 mmol) and acetyl chloride (436 mg, 5.55 mmol) at 0 oC. The reaction mixture was stirred at RT for 2 h. The mixture was diluted with water (10 mL), extracted with DCM (20 mL×2). The organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by column gel chromatography (PE/EA=1/1) to give title product (570 mg, 55.37 %) as a yellow solid. ESI-MS (M+H) +: 243.0. Step 5: Preparation of tert-butyl 8-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- oxa-5,8-diazaspiro[3.5]nonane-5-carboxylate. [0686] To a solution of 1-(4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl)ethan-1-one (500 mg, 2.07 mmol) in 1,4-dioxane (10 mL) were added tert-butyl 2-oxa-5,8- diazaspiro[3.5]nonane-5-carboxylate (616 mg, 2.70 mmol), Cs2CO3 (2 g, 6.21 mml), BINAP (124 mg, 0.41 mml) and Pd(OAc)2 (22 mg, 0.21 mml). The mixture was stirred at 100 oC for 16 h. The mixture was concentrated in vacuo to give title product (800 mg, crude) as a yellow solid. ESI-MS (M+H+): 389.0. Step 6: Preparation of tert-butyl 8-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8- diazaspiro[3.5]nonane-5-carboxylate. [0687] To a solution of tert-butyl 8-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- oxa-5,8-diazaspiro[3.5]nonane-5-carboxylate (800 mg, 2.06 mmol) in MeOH (10 mL) and H2O (2 mL) was added K2CO3 (1.4 g, 10.30 mmol). The mixture was stirred at 60 oC for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo. The crude was purified by (PE: EA=0:1) to give title product (600 mg, 84.10 %) as a yellow solid. ESI-MS (M+H) +: 347.2.1H NMR (400 MHz, CDCl3) δ 7.75 (d, J = 5.9 Hz, 1H), 6.14 (d, J = 6.0 Hz, 1H), 4.83 (d, J = 6.7 Hz, 2H), 4.40 (d, J = 6.8 Hz, 2H), 3.59 (t, J = 8.1 Hz, 2H), 3.50 (s, 2H), 3.39 – 3.33 (m, 2H), 3.12 (t, J = 8.2 Hz, 2H), 3.05 – 2.99 (m, 2H), 1.47 (s, 9H). Step 7: Preparation of tert-butyl 8-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8-diazaspiro[3.5]nonane- 5-carboxylate. [0688] To a solution of tert-butyl 8-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8- diazaspiro[3.5]nonane-5-carboxylate (100 mg, 0.29 mmol) in THF (10 mL) were added TEA (146 mg, 1.45 mmol), triphosgene (84 mg, 0.29 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (73 mg, 0.44 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by (PE/EA=1/3) to give title product (40 mg, 25.78 %) as a yellow solid. ESI-MS (M+H) +: 538.1. Step 8: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2-oxa-5,8- diazaspiro[3.5]nonan-8-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0689] To a solution of tert-butyl 8-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8-diazaspiro[3.5]nonane- 5-carboxylate (40 mg, 0.07 mmol) in DCM (5 mL) was added ZnBr2 (168 mg, 0.70 mmol). The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (5.57 mg, 13.59 %) as a yellow solid. ESI-MS (M+H+): 438.1.1H NMR (400 MHz, MeOD-d4) δ 9.64 (d, J = 6.5 Hz, 1H), 8.06 (d, J = 6.0 Hz, 1H), 7.93 (s, 1H), 7.80 (d, J = 9.6 Hz, 1H), 6.72 (d, J = 6.0 Hz, 1H), 4.78 (d, J = 8.0 Hz, 2H), 4.67 (d, J = 8.0 Hz, 2H), 4.25 – 4.10 (m, 2H), 3.79 (s, 2H), 3.49 – 3.44 (m, 2H), 3.44 – 3.39 (m, 2H), 3.29 – 3.23 (m, 2H), 2.51 (s, 3H). Example 209 – Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3,3,5,5- tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000375_0001
Step 1: Preparation of 1-(2,4-dimethoxybenzyl)-3,3,5,5-tetramethylpiperazin-2-one. [0690] AcOH (0.260 mL, 4.54 mmol) was added to 2-methylpropane-1,2-diamine (0.595 mL, 5.67 mmol) and 2,4-dimethoxybenzaldehyde(943 mg, 5.67 mmol) in MeOH (20 mL) at r.t. under nitrogen. The resulting slurry turns yellow rapidly. The reaction mixture was stirred at r.t. for 1 h. The reaction mixture was then diluted with MeOH (20 mL), NaBH4 (429 mg, 11.34 mmol) was added slowly, and the reaction mixture was stirred at r.t. for 1 h. The solvent was removed under reduced pressure, and the white residue was treated with H2O (20 mL) and extracted with CH2Cl2 (30 mL *2). The solvent removed under reduced pressure to give a mixture of intermediate. The crude yellow oil obtained was purified by flash silica chromatography, elution gradient 0-10% NH3·H2O in MeOH in CH2Cl2. Pure fractions were evaporated to dryness to afford the product as a mixture of intermediate (1 g, crude) as a colorless oil.50% aq. NaOH (1.908 mL, 36.14 mmol) was added slowly to 1,1,1-trichloro-2- methylpropan-2-ol (2.70 g, 14.46 mmol), intermediate (2.36 g, 7.23 mmol), and N-benzyl- N,N-triethylammonium chloride (0.165 g, 0.72 mmol) in CH2Cl2 (70 mL) cooled to 0 °C. The resulting mixture was stirred at 0 °C and left to warm to r.t. over 20 h. The reaction mixture was treated with H2O (50 mL) until any solid had dissolved. The organic layer was separated and the aqueous layer was extracted with CH2Cl2 (2 × 50 mL).The combined organic layers were dried (Na2SO4), filtered, and concentrated under reduced pressure to give a pale yellow oil. The crude product was purified by flash silica chromatography, elution gradient 50-100% EtOAc in PE to afford production (1 g, 25%) as a yellow oil 1 H NMR (400 MHz, CDCl3) δ 7.20 (d, J = 7.9 Hz, 1H), 6.48 – 6.42 (m, 2H), 4.58 (s, 2H), 3.80 (d, J = 4.5 Hz, 6H), 3.09 (s, 2H), 1.39 (s, 6H), 1.09 (s, 6H). Step 2: Preparation of 3,3,5,5-tetramethylpiperazin-2-one 4-methylbenzenesulfonate. [0691] 1-(2,4-dimethoxybenzyl)-3,3,5,5-tetramethylpiperazin-2-one (2 g, 6.536 mmol) was dissolved in toluene (25 mL) at r.t. p-TsOH (2.5 g, 14.379 mmol) was then added, and the resulting solution was stirred at 120 °C for 16 h. The reaction was quenched with MeOH. The purple residue was triturated with DCM and filtered to give title product (p-TsOH salt, 1 g, 46.7 %) as a white powder.1H NMR (400 MHz, DMSO-d6) δ 8.98 (s, 2H), 8.36 (s, 1H), 7.48 (d, J = 8.1 Hz, 3H), 7.12 (d, J = 7.8 Hz, 3H), 3.28 (d, J = 3.2 Hz, 2H), 2.29 (s, 4H), 1.51 (s, 6H), 1.39 (s, 6H). Step 3: Preparation of 1-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,3,5,5- tetramethylpiperazin-2-one. [0692] A mixture of 3,3,5,5-tetramethylpiperazin-2-one 4-methylbenzenesulfonate (945 mg, 2.88 mmol), 1-(4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl)ethan-1-one (830 mg, 3.46 mmol), Pd2(dba)3(264 mg, 0.29 mmol), xantphos (334 mg, 0.58 mmol) and Cs2CO3 (3.4 g, 10.38 mmol) in 1,4-dioxane (30 mL) at room temperature was purged with N2 for three times. Then the reaction mixture was stirred at 95 oC for 16 h. After cooling to rt, the mixture was concentrated in vacuo. The crude was purified by silica gel column (PE: EA=1:5) to give the title product (300 mg, 33 %) as a brown solid. ESI-MS: [M+H] +: 317.2.1H NMR (400 MHz, DMSO-d6) δ 8.15 (d, J = 5.6 Hz, 1H), 6.91 (d, J = 5.6 Hz, 1H), 3.96 (t, J = 8.5 Hz, 2H), 3.57 (s, 2H), 2.86 (t, J = 8.5 Hz, 2H), 2.56 (s, 3H), 1.31 (s, 6H), 1.18 (s, 6H). Step 4: Preparation of 1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,3,5,5- tetramethylpiperazin-2-one. [0693] To a solution of 1-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,3,5,5- tetramethylpiperazin-2-one (1 g, 3.16 mmol) in MeOH:H2O (22 mL:4 mL) was added KOH (532 mg, 9.49 mmol). The mixture was stirred at 45 oC for 16 h. The mixture was collected by filtered, washed with water (5 mL*3) and dryness in vacuo to give the title compound (400 mg, 46 %) as a brown solid. ESI-MS (M+H) +: 275.1.1H NMR (400 MHz, DMSO-d6) δ 7.68 (d, J = 5.7 Hz, 1H), 6.27 (d, J = 5.7 Hz, 1H), 3.44 (t, J = 8.5 Hz, 2H), 3.17 (s, 2H), 2.79 (t, J = 8.5 Hz, 2H), 1.28 (s, 6H), 1.15 (s, 6H). Step 5: Preparation of 4-(3,3,5,5-tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine. [0694] To a mixture of 1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,3,5,5- tetramethylpiperazin-2-one (400 mg, 1.46 mmol) in THF (5.8 mL) was added LiAlH4 (5.8 mL, 5.84 mmol, 1 M in THF). Then the reaction mixture was stirred at 70 oC for 1 h. After cooling to rt, the mixture was concentrated in vacuo. The crude was purified by C18 flash (0.1 % NH3·H2O in water / MeCN) to give the product (140 mg, 36.9 %) as a brown solid. ESI-MS: [M+H] +: 261.0.1H NMR (400 MHz, DMSO-d6) δ 7.52 (d, J = 5.9 Hz, 1H), 6.05 (d, J = 6.0 Hz, 1H), 3.38 (t, J = 8.4 Hz, 2H), 2.96 (t, J = 8.3 Hz, 2H), 2.80 (s, 4H), 1.11 (s, 12H). Step 6: Preparation of N-(7-fluoro-2-methyl-2H-indazol-5-yl)-4-(3,3,5,5- tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0695] To a solution of 4-(3,3,5,5-tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (50 mg, 0.19 mmol) in THF (10 mL) were added phenyl (7-fluoro-2-methyl-2H- indazol-5-yl)carbamate (66 mg, 6.23 mmol), DMAP (70 mg, 0.58 mmol). Then the reaction mixture was stirred at 70 oC for 16 h. After cooling to rt, the mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.05% TFA in H2O / MeCN) to give the title compound (30 mg, 27.6 %) as yellow solid. ESI-MS: [M+H]+: 452.0.1H NMR (400 MHz, DMSO-d6)δ 8.57 (s, 2H), 8.38 (d, J = 2.5 Hz, 1H), 8.00 (d, J = 5.7 Hz, 1H), 7.73 (d, J = 1.4 Hz, 1H), 7.33 – 7.23 (m, 1H), 6.76 – 6.63 (m, 1H), 4.18 (s, 3H), 4.09 – 4.01 (m, 2H), 3.39 – 3.32 (m, 4H), 3.26 – 3.20 (m, 2H), 1.44 (s, 12H). Example 210 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (3,3,5,5-tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000378_0001
[0696] Step 1: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3,3,5,5- tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0697] To a solution of 4-(3,3,5,5-tetramethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (40 mg, 0.15 mmol) in THF (3 mL) were added TEA (47 mg, 0.46 mmol), DMAP (4 mg, 0.03 mmol) and phenyl (8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamate (53 mg, 0.18 mmol). The reaction mixture was stirred at 70 °C for 16 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (33 mg, 47.57 %) as a yellow solid. ESI-MS (M+H) +: 452.0.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 9.11 (s, 1H), 8.55 (s, 2H), 8.10 (s, 1H), 8.00 (d, J = 6.1 Hz, 1H), 7.77 (s, 1H), 6.70 (d, J = 6.1 Hz, 1H), 4.06 – 4.01 (m, 2H), 3.39 – 3.29 (m, 4H), 3.24 (t, J = 8.9 Hz, 2H), 2.43 (s, 3H), 1.44 (s, 12H).
Example 211 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-2- methyl-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000379_0001
Step 1: Preparation of tert-butyl (1-(4-bromo-2-fluoropyridin-3-yl)propan-2-yl)carbamate. [0698] To a solution of 4-bromo-2-fluoropyridine (446 mg, 2.53 mmol) in THF (5 mL) was added LDA (1.6 mL, 13.17 mmol, 2.0 M in THF) at -78°C. The mixture was stirred at -78°C for 2 h. Then tert-butyl 4-methyl-1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (500 mg, 2.11 mmol) was added to the reaction and stirred at r.t for 16 h. The reaction mixture was quenched with sat. NH4Cl (10 mL) and extracted with EtOAc (10 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo, the residue was recrystallized by PE/EA=2:1 to give title compound (500 mg, crude) a yellow solid. ESI-MS (M+H) +: 414.9. Step 2: Preparation of 1-(4-bromo-2-fluoropyridin-3-yl)propan-2-amine. [0699] To a solution of tert-butyl (1-(4-bromo-2-fluoropyridin-3-yl)propan-2-yl)carbamate (400 mg, 0.99 mmol) in DCM (2 mL) and TFA (2 mL). The mixture was stirred at RT for 2 h. The mixture was diluted with H2O (3 mL), extracted with DCM (5 mL*3), the aqueous was concentrated in vacuo to give title compound (120 mg, crude) as a yellow solid. ESI-MS (M+H) +: 234.9. Step 3: Preparation of 4-bromo-2-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [0700] To a solution of 1-(4-bromo-2-fluoropyridin-3-yl)propan-2-amine (100 mg, 20.43 mmol) in DMF (2 mL) was added DIEA (130 mg, 1.29 mmol). The mixture was stirred at 80oC for 6 h. The mixture was diluted with H2O (10 mL), extracted with EA (6 mL*3), organic layer concentrated in vacuo to give title compound (100 mg, crude) as a brown solid. ESI-MS (M+H) +: 214.8. Step 4: Preparation of tert-butyl 4-(2-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [0701] A mixture of 4-bromo-2-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (100 mg, 0.47 mmol) and tert-butyl piperazine-1-carboxylate (263 mg, 1.41 mmol) in DIEA (1 mL) was stirred at 140oC for 16h in a sealed tube. The mixture was concentrated in vacuo and purified by silica gel column (100%EA) to give title product (80 mg, Y: 53.4%) as a yellow solid. ESI-MS (M+H) +: 319.5.1H NMR (400 MHz, CDCl3) δ 7.57 (d, J = 6.4 Hz, 1H), 6.09 (d, J = 6.5 Hz, 1H), 3.58 – 3.50 (m, 4H), 3.46 – 3.42 (m, 4H), 2.70 – 2.60 (m, 1H), 2.37 – 2.35 (m, 2H), 1.46 (s, 9H), 1.31 (d, J = 6.2 Hz, 3H). Step 5: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0702] To a mixture of tert-butyl 4-(2-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (60 mg, 0.19 mmol) 8-fluoro-2-methylimidazo[1,2-a]pyridin-6- amine (47 mg, 0.28 mmol) and TEA (57 mg, 0.56 mmol) in THF (6 mL) was added triphosgene (113 mg, 0.38 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by prep-TCL (100% EA) to give title product (25 mg, Y: 26.0%) as a white solid. ESI-MS (M+H) +: 510.2. Step 6: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-2-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0703] A mixture of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (20 mg, 0.04 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (15 mg, Y: 93.2%) as a white solid. ESI-MS (M+H) +: 410.0.1H NMR (400 MHz, DMSO-d6) δ 12.14 (s, 1H), 9.19 (s, 1H), 8.94 (s, 2H), 8.15 (s, 1H), 8.00 (d, J = 6.1 Hz, 1H), 7.87 (d, J = 12.2 Hz, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.72 – 4.60 (m, 1H), 3.53 – 3.48 (m, 4H), 3.44 – 3.41 (m, 1H), 3.28 – 3.20 (m, 4H), 2.76 – 2.69 (m, 1H), 2.45 (s, 3H), 1.32 (d, J = 6.2 Hz, 3H). Example 212 – Preparation of (R)-4-(3-aminopyrrolidin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000381_0001
Step 3 Compound 212 Step 1: Preparation of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)carbamate. [0704] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (500 mg, 3.23 mmol) and tert-butyl (R)-pyrrolidin-3-ylcarbamate (720 mg, 3.87 mmol) in DIEA (1250 mg, 9.19 mmol) was stirred at 140 oC for 16 h in a sealed tube. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1, DCM: MeOH=10: 1) to give title product (484 mg, 49%) as a yellow solid. ESI-MS (M+H) +: 305.2.1H NMR (400 MHz, DMSO-d6) δ 7.45 – 7.36 (m, 2H), 6.12 (d, J = 7.4 Hz, 1H), 4.14 – 4.04 (m, 2H), 3.82 – 3.70 (m, 2H), 3.67 – 3.55 (m, 4H), 3.19 – 3.15 (m, 1H), 2.10 – 2.00 (m, 1H), 1.91 – 1.82 (m, 1H), 1.39 (s, 9H). Step 2: Preparation of tert-butyl (R)-(1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)carbamate. [0705] To a solution of tert-butyl (R)-(1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)pyrrolidin-3-yl)carbamate (400 mg, 1.32 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (261 mg, 1.58 mmol) in THF (10 mL) were added TEA (2 mL) and triphosgene (469 mg, 1.58 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1, DCM: MeOH= 10: 1) to give title product (240 mg, 36%) as a yellow solid. ESI-MS (M+H) +: 496.2. Step 3: Preparation of (R)-4-(3-aminopyrrolidin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0706] To a solution of tert-butyl (R)-(1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)pyrrolidin-3-yl)carbamate (235 mg, 0.47 mmol) in EA ( 2 mL) was added 4M HCl / EA (5 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtrated and dried in vacuo to give 220 mg crude product as HCl salt. The compound (40 mg) was purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (15.94 mg, yield: 35 %) as a white solid. ESI-MS (M+H) +: 396.2.1H NMR (400 MHz, MeOD-d4) δ 9.32 (d, J = 6.0 Hz, 1H), 7.94 (s, 1H), 7.82 (d, J = 9.3 Hz, 1H), 7.77 (d, J = 6.8 Hz, 1H), 6.48 (d, J = 6.8 Hz, 1H), 4.29 – 4.21 (m, 2H), 4.10 – 4.01 (m, 2H), 3.99 – 3.91 (m, 1H), 3.89 – 3.78 (m, 2H), 3.67 – 3.57 (m, 2H), 2.53 (s, 3H), 2.50 – 2.42 (m, 1H), 2.28 – 2.18 (m, 1H). Example 213 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2- oxa-5,8-diazaspiro[3.5]nonan-8-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000382_0001
Compound 213 Step 1: Preparation of tert-butyl 8-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8-diazaspiro[3.5]nonane- 5-carboxylate. [0707] To a solution of tert-butyl 8-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8- diazaspiro[3.5]nonane-5-carboxylate (100 mg, 0.29 mmol) and 8-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (57 mg, 0.35 mmol) in THF (2 mL) were added TEA (0.5 mL) and triphosgene (104 mg, 0.35 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (60 mg, 38.7%) as a yellow solid. ESI-MS (M+H) +: 537.9.1H NMR (400 MHz, DMSO-d6) δ 11.78 (s, 1H), 8.84 (s, 1H), 7.97 (d, J = 6.1 Hz, 1H), 7.85 (d, J = 2.8 Hz, 1H), 7.26 (d, J = 12.2 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 4.71 – 4.70 (m, 2H), 4.29 (d, J = 6.6 Hz, 2H), 4.04 – 3.99 (m, 2H), 3.59 (s, 2H), 3.40 – 3.35 (m, 2H), 3.28 – 3.15 (m, 2H), 3.15 – 3.10 (m, 2H), 2.33 (s, 3H), 1.42 (s, 9H). Step 2: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2-oxa-5,8- diazaspiro[3.5]nonan-8-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0708] To a solution of tert-butyl 8-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-oxa-5,8-diazaspiro[3.5]nonane- 5-carboxylate (50 mg, 0.09 mmol) in DCM/MeOH (1 mL, 1: 1) was added ZnBr2 (104 mg, 0.46 mmol). The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (9.77 mg, yield: 25 %) as a white solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, MeOD-d4) δ 9.18 (s, 1H), 8.09 – 8.03 (m, 2H), 7.97 (dd, J = 11.5, 1.3 Hz, 1H), 6.77 (d, J = 6.2 Hz, 1H), 4.80 (d, J = 8.0 Hz, 2H), 4.67 (d, J = 8.0 Hz, 2H), 4.24 – 4.16 (m, 2H), 3.85 (d, J = 5.3 Hz, 2H), 3.56 – 3.50 (m, 2H), 3.46 – 3.41 (m, 2H), 3.35 – 3.32 (m, 2H), 2.56 (s, 3H).
Example 214 – Preparation of N-(6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000384_0001
Step 1: Preparation of tert-butyl 4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0709] To a solution of 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (153 mg, 0.79 mmol) in toluene (10 mL) were added TEA (162 mg, 1.60 mmol), DPPA (330 mg, 1.20 mmol). The mixture was stirred at r.t for 1 h and 70 o C for 1 h. Then tert-butyl 4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (120 mg, 0.40 mmol) was added to the solution and stirred at 90 o C for 16 h. The precipitate was filtered, washed with toluene (5 mL) and dried in vacuo to give title product (90 mg, yield: 45 %) as a white solid. ESI-MS (M+H) +:496.2.1H NMR (400 MHz, CDCl3) δ 8.36 (d, J = 7.9 Hz, 1H), 8.30 (d, J = 5.7 Hz, 1H), 7.94 (d, J = 5.9 Hz, 1H), 6.37 (d, J = 6.1 Hz, 1H), 6.18 (s, 1H), 4.22 – 4.12 (m, 2H), 3.61 – 3.54 (m, 4H), 3.27 – 3.19 (m, 4H), 3.09 – 3.06 (m, 2H), 2.43 (s, 3H), 1.49 (s, 9H). Step 2: Preparation of N-(6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0710] To a solution of tert-butyl 4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (43.06 mg, 83%) as a white solid. ESI-MS (M+H) +:396.1.1H NMR (400 MHz, DMSO-d6) δ 12.30 (s, 1H), 8.93 (d, J = 6.3 Hz, 1H), 8.78 (s, 2H), 8.27 (d, J = 8.0 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 6.31 (s, 1H), 4.04 (t, J = 8.5 Hz, 2H), 3.49 (d, J = 5.0 Hz, 4H), 3.26 – 3.20 (m, 4H), 3.16 (t, J = 8.5 Hz, 2H), 2.33 (s, 3H). Example 215 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000385_0001
Boc H Compound 215 Step 1: Preparation of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0711] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.33 mmol) in THF (10 mL) were added 2,8-dimethylimidazo[1,2- a]pyrazin-6-amine hydrochloride (131 mg, 0.66 mmol), TEA (834.9 mg, 8.25 mmol) and triphosgene (157 mg, 0.53 mmol) (in THF (0.5 mL )) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:2) to give title product (50 mg, yield: 30 %) as a white solid. ESI-MS (M+H) +:493.2.1H NMR (400 MHz, CDCl3) δ 12.00 (s, 1H), 8.86 (s, 1H), 8.04 (d, J = 6.0 Hz, 1H), 7.39 (s, 1H), 6.38 (d, J = 6.1 Hz, 1H), 4.16 (t, J = 8.5 Hz, 2H), 3.59 – 3.53 (m, 4H), 3.24 (d, J = 4.7 Hz, 4H), 3.11 (t, J = 8.6 Hz, 2H), 2.84 (s, 3H), 2.49 (s, 3H), 1.49 (s, 9H). [0712] Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(piperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0713] To a mixture of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was diluted in 0.2 M TFA (5 mL) and concentration under reduced pressure to give title product (48.85 mg, 96%) as a white solid. ESI-MS (M+H) +:393.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 9.15 (s, 1H), 8.21 (d, J = 0.8 Hz, 1H), 8.00 (d, J = 6.2 Hz, 1H), 6.70 (d, J = 6.4 Hz, 1H), 4.13 – 4.10 (m, 2H), 3.62 – 3.54 (m, 4H), 3.29 – 3.19 (m, 6H), 2.80 (s, 3H), 2.54 (s, 3H). Example 216 – Preparation of N-(7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000386_0001
H Compound 216 Step 1: Preparation of tert-butyl 4-(1-((7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0714] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (120 mg, 0.39 mmol), 7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (86.97 g, 0.39 mmol) in THF (10 mL) were added TEA (393.90 mg, 3.90 mmol) and triphosgene (289.56 mg, 0.98 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 29.76%) as a white solid. ESI-MS (M+H) +: 518.1. Step 2: Preparation of N-(7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(piperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0715] A mixture of tert-butyl 4-(1-((7-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.11 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h . The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in water / CH3CN) to give title product (20.34 mg, 43.60%) as a white solid. ESI-MS (M+H) +:418.2. 1H NMR (400 MHz, DMSO-d6) δ 12.35 (s, 1H), 9.61 (s, 1H), 8.88 (s, 2H), 8.12 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 7.54 (s, 1H), 6.64 (d, J = 6.2 Hz, 1H), 4.10 – 4.04 (m, 2H), 3.52 – 3.49 (m, 4H), 3.26 – 3.21 (m, 4H), 3.20 – 3.16 (m, 2H), 2.44 (s, 3H), 2.17 – 2.09 (m, 1H), 1.29 – 1.22 (m, 2H), 0.94 – 0.88 (m, 2H). Example 217 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6- methyl-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000387_0001
Step 1: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0716] To a solution of tert-butyl 4-(6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (70 mg, 0.22 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (55 mg, 0.33 mmol) in THF (10 mL) were added TEA (2 mL) and a solution of triphosgene (98 mg, 0.33 mmol) in THF (1 mL) dropwise to the mixture at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:4) to provide title product (98 mg, crude) as a green solid. ESI-MS (M+H)+:509.9.1H NMR (400 MHz, DMSO-d6) δ 12.39 (s, 1H), 9.25 (d, J = 6.6 Hz, 1H), 7.18 (s, 1H), 7.15 (s, 1H), 6.43 (s, 1H), 3.99 (t, J = 8.5 Hz, 2H), 3.46 – 3.41 (m, 4H), 3.29 – 3.25 (m, 4H), 3.10 (t, J = 8.5 Hz, 2H), 2.37 (s, 3H), 2.28 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0717] To a solution tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (110 mg, 0.22 mmol) in DCM (2 mL) was added TFA (2 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (53 mg, yield: 46 %) as a white solid. ESI-MS (M+H)+: 409.9.1H NMR (400 MHz, DMSO-d6) δ 12.79 (d, J = 2.2 Hz, 1H), 9.67 (d, J = 6.6 Hz, 1H), 8.92 (s, 2H), 8.15 (s, 1H), 8.07 (d, J = 10.2 Hz, 1H), 6.55 (s, 1H), 4.07 – 4.01 (m, 2H), 3.53 – 3.46 (m, 4H), 3.27 – 3.18 (m, 4H), 3.14 (t, J = 8.4 Hz, 2H), 2.44 (s, 3H), 2.41 (s, 3H). Example 218 – Preparation of (S)-4-(4-ethyl-3-methylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000388_0001
Step 1: Preparation of (S)-4-(4-ethyl-3-methylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0718] A mixture of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.09 mmol), acetaldehyde (11 mg, 0.25 mmol), NaBH3CN (15.7 mg, 0.25 mmol) and TEA (48.5 mg, 0.48 mmol) in MeOH (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (27.19 mg, yield: 63.99 %) as a colorless oil. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, DMSO-d6) δ 12.43 (s, 1H), 9.90 – 9.71 (m, 1H), 9.68 (d, J = 6.7 Hz, 1H), 8.17 (s, 1H), 8.09 (d, J = 10.1 Hz, 1H), 7.99 (d, J = 6.1 Hz, 1H), 6.70 – 6.65 (m, 1H), 4.06 (t, J = 8.4 Hz, 2H), 3.96 – 3.91 (m, 1H), 3.86 – 3.75 (m, 1H), 3.57 (d, J = 12.0 Hz, 1H), 3.49 – 3.37 (m, 2H), 3.28 – 3.14 (m, 5H), 3.11 – 3.04 (m, 1H), 2.45 (d, J = 0.8 Hz, 3H), 1.35 (d, J = 6.4 Hz, 3H), 1.24 (t, J = 6.6 Hz, 3H).
Example 219 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- (2-methoxyethyl)-3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000389_0001
Step 1: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-(2- methoxyethyl)-3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate. [0719] To a mixture of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.10 mmol) and propan-2-one (27.16 mg, 0.19 mmol) in ACN (3 mL) was added K2CO3 (40.5 mg, 0.29 mmol).The mixture was stirred at 70 oC for 16 h. The mixture was filtered and the filtrate was purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (15 mg, Y: 32.84 %) as a yellow solid. ESI-MS (M+H) +: 468.1.1H NMR (400 MHz, MeOD-d4) δ 9.63 (d, J = 6.4 Hz, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.93 (s, 1H), 7.80 (d, J = 9.7 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.16 (t, J = 8.5 Hz, 2H), 4.03 – 3.51 (m, 8H), 3.44 (s, 3H), 3.39 – 3.32 (m, 2H), 3.29 – 3.20 (m, 3H), 2.51 (s, 3H), 1.49 (d, J = 6.5 Hz, 3H).
Example 220 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4- isopropyl-3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000390_0001
Step 1: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-isopropyl-3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0720] To a mixture of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.10 mmol), propan-2-one (56 mg, 0.98 mmol) and TEA (29 mg, 0.29 mmol) in MeOH (4 mL) was added NaBH3CN (29.71 mg, 0.49 mmol). The mixture was stirred at 70 oC for 48 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (23 mg, Y: 52.14 %) as a yellow solid. ESI-MS (M+H) +: 452.2.1H NMR (400 MHz, DMSO-d6) δ 12.41 (s, 1H), 9.85 (s, 1H), 9.67 – 9.63 (m, 1H), 8.15 (s, 1H), 8.07 (d, J = 10.0 Hz, 1H), 7.98 (d, J = 6.0 Hz, 1H), 6.67 (d, J = 6.0 Hz, 1H), 4.06 (t, J = 8.4 Hz, 2H), 3.96 – 3.91 (m, 2H), 3.48 – 3.44 (m, 2H), 3.35 – 3.27 (m, 2H), 3.25 – 3.20 (m, 2H), 3.17 – 3.08 (m, 2H), 2.45 (s, 3H), 1.35 (d, J = 6.6 Hz, 6H), 1.19 (d, J = 6.4 Hz, 3H).
Example 221 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3,3,4- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000391_0001
Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3,3,4- trimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0721] To a solution of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (60 mg, 0.14 mmol) in MeOH (5 mL) were added (CH2O)n (13 mg, 0.42 mmol), CH3COOH (42 mg, 0.70 mmol). The mixture was stirred at r.t for 1 h, NaBH3CN (27 mg, 0.42 mmol) was added to the mixture and stirred at 50 oC for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep- HPLC (0.1% TFA in H2O / ACN) to give title product (8 mg, yield: 10 %) as a yellow solid. ESI-MS (M+H) +:438.2.1H NMR (400 MHz, MeOD-d4) δ 9.63 (d, J = 6.4 Hz, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.93 (s, 1H), 7.80 (d, J = 9.7 Hz, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.16 (t, J = 8.5 Hz, 2H), 3.97 – 3.68 (m, 2H), 3.52 – 3.46 (m, 2H), 3.30 – 3.18 (m, 4H), 2.89 (s, 3H), 2.51 (d, J = 0.7 Hz, 3H), 1.51 (s, 6H).
Example 222 – Preparation of (R)-4-(3,4-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000392_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0722] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) in THF (5 mL) were added TEA (143 mg, 1.42 mmol), triphosgene (168 mg, 0.57 mmol) at 0oC. The mixture was stirred at r.t for 1 h. The mixture was added 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (114 mg, 0.57 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (100 mg, Y: 41.6 %) as a yellow solid. ESI-MS (M+H) +:510.2. Step 2: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0723] To a solution of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (90 mg, 0.18 mmol) in EA (3 mL) was added 4M HCl / EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered to give title compound (70 mg, 88.9 %) as a brown solid. ESI-MS (M+H)+:410.2. Step 3: Preparation of (R)-4-(3,4-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0724] To a mixture of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride (50 mg, 0.12 mmol) in MeOH (2 mL) were added (CH2O)n (18 mg, 0.61 mmol) and AcOH (22 mg, 0.37 mmol). The mixture was stirred at r.t for 1 h. Then NaBH3CN (38 mg, 0.61 mmol) was added to the mixture and stirred at 50oC for 16 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.03% FA in water/ ACN) to give title product (5.2 mg, Y: 14.5%) as a yellow solid. ESI-MS (M+H)+:424.2.1H NMR (400 MHz, MeOD-d4) δ 9.61 (d, J = 6.4 Hz, 1H), 7.99 (d, J = 6.0 Hz, 1H), 7.92 (s, 1H), 7.80 (d, J = 9.7 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.16 (t, J = 8.5 Hz, 2H), 3.97 – 3.91 (m, 1H), 3.67 – 3.59 (m, 1H), 3.49 – 3.41 (m, 1H), 3.32 (s, 2H), 3.27 – 3.22 (m, 2H), 3.15 – 3.03 (m, 1H), 2.99 (s, 3H), 2.51 (s, 3H), 1.47 (d, J = 6.5 Hz, 3H). Example 223 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000393_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0725] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (200 mg, 0.6 mmol) and TEA (181 mg, 1.8 mmol) in THF (8 mL) was added triphosgene (356 mg, 1.2 mmol) at 0oC, the mixture was stirred at RT for 1 h .7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-amine (0.8 mg, 0.6 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 5) to give title product (60 mg, Y: 18.6%) as a yellow solid. ESI-MS (M+H) +: 538.2. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0726] A mixture of tert-butyl (2R,6S)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (51 mg, Y: 99.4%) as a yellow solid. ESI-MS (M+H) +: 438.1. 1H NMR (400 MHz, DMSO-d6) δ 12.45 (s, 1H), 9.54 (d, J = 6.3 Hz, 1H), 9.30 (d, J = 8.7 Hz, 1H), 8.67 (d, J = 9.6 Hz, 1H), 8.16 (d, J = 1.0 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.70 (d, J = 6.2 Hz, 1H), 4.08 – 4.01 (m, 2H), 3.94 – 3.86 (m, 2H), 3.40 – 3.35 (m, 2H), 3.25 – 3.18 (m, 2H), 2.97 – 2.87 (m, 2H), 2.52 (d, J = 1.7 Hz, 3H), 2.47 (s, 3H), 1.27 (d, J = 6.5 Hz, 6H). Example 224 – Preparation of (S)-N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000394_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0727] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (80 mg, 0.25 mmol) and 7-fluoro-2,8-dimethylimidazo[1,2- a]pyridin-6-amine (68 mg, 0.38 mmol) in THF (2 mL) were added TEA (1 mL) and triphosgene (89 mg, 0.30 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (40 mg, 31%) as a white solid. ESI-MS (M+H) +: 524.1. Step 2: Preparation of (S)-N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0728] To a solution of tert-butyl (S)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate(35 mg, 0.07 mmol) in DCM (2 mL) was added TFA (2 mL), the mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (31.65 mg, yield: 86 %) as a white solid. ESI- MS (M+H) +: 424.1.1H NMR (400 MHz, MeOD-d4) δ 9.47 (d, J = 6.2 Hz, 1H), 8.00 (d, J = 6.1 Hz, 1H), 7.91 (d, J = 1.0 Hz, 1H), 6.67 (d, J = 6.1 Hz, 1H), 4.20 – 4.11 (m, 2H), 3.90 – 3.82 (m, 2H), 3.56 – 3.47 (m, 2H), 3.30 – 3.21 (m, 4H), 3.09 – 3.00 (m, 1H), 2.57 – 2.52 (m, 6H), 1.41 (d, J = 6.6 Hz, 3H). Example 225 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000395_0001
Step 1: Preparation of tert-butyl 4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0729] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) and tert-butyl 4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (122 mg, 0.68 mmol) in THF (5 mL) were added TEA (227 mg, 2.25 mmol) and triphosgene (134 mg, 0.45 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=1/3) to give title product (80 mg, 32.98 %) as a yellow solid. ESI-MS (M+H) +: 538.2. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2,8-dimethylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0730] To a solution of tert-butyl 4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (80 mg, 0.15 mmol) in EA (2 mL) was added 4 M HCl/EA (2 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (38 mg, 58.37 %) as a yellow solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, MeOD-d4) δ 9.48 (d, J = 6.0 Hz, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.91 (s, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.16 (t, J = 8.5 Hz, 2H), 3.59 – 3.51 (m, 2H), 3.46 – 3.40 (m, 2H), 3.36 (s, 2H), 3.25 (t, J = 8.5 Hz, 2H), 2.57 – 2.54 (m, 3H), 2.53 (s, 3H), 1.51 (s, 6H). Example 248 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6- oxa-2,9-diazaspiro [4.5]decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000396_0001
Step 1: Preparation of tert-butyl 2-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6- oxa-2,9-diazaspiro [4.5] decane-9-carboxylate. [0731] A mixture of 1-(4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-1-yl) ethan-1- one (410 mg, 1.7 mmol), tert-butyl 6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (411 mg, 1.7 mmol), Pd2(dba)3 (155 mg, 0.17 mmol), BINAP (212 mg, 0.34 mmol) and Cs2CO3 (1664 mg, 5.1 mmol) in 1,4-dioxane (8 mL) was stirred for 3 hours at 100°C under nitrogen atmosphere. The resulting mixture was diluted with H2O (50 mL). The resulting mixture was extracted with EA (30 mL x 3). The combined organic layers were dried over anhydrous Na2SO4. After filtration, the filtrate was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% FA in water / ACN) to afford tert-butyl 2-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (600 mg, 87%) as a yellow solid. ESI-MS (M+1) +: 403.2. Step 2: Preparation of tert-butyl 2-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9- diazaspiro [4.5] decane-9-carboxylate. [0732] A mixture of tert-butyl 2-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6- oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (550 mg, 1.37 mmol) and NaOH (109 mg, 2.73 mmol) in EtOH (11 mL) was stirred for 2 hours at 70°C under nitrogen atmosphere. The resulting mixture was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% FA in water / ACN) to afford tert-butyl 2-(2,3-dihydro- 1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (450 mg, 83%) as a yellow solid. ESI-MS (M+1) +: 361.3.1H NMR (400 MHz, DMSO-d6) δ 7.42 (d, J = 6.1 Hz, 1H), 5.81 (d, J = 6.2 Hz, 1H), 3.65 – 3.61 (m, 2H), 3.50 (dd, J = 14.5, 6.0 Hz, 4H), 3.40 – 3.32 (m, 6H), 3.23 – 3.17 (m, 2H), 2.04 (dt, J = 12.7, 6.4 Hz, 1H), 1.94 – 1.86 (m, 1H), 1.39 (s, 9H). Step 3: Preparation of tert-butyl 2-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9- carboxylate. [0733] To a solution of tert-butyl 2-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9- diazaspiro [4.5] decane-9-carboxylate (350 mg, 1 mmol) in THF (7 mL) were added DIEA (627 mg, 5 mmol), triphosgene (281 mg, 1 mmol) and 8-fluoro-2-methylimidazo[1,2-a] pyridin-6-amine (292 mg, 1.5 mmol) at 0°C. The reaction mixture was stirred at RT for 16 h. The resulting mixture was diluted with H2O (20 mL). The resulting mixture was extracted with EA (20 mL x 3). The combined organic layers were dried over anhydrous Na2SO4. After filtration, the filtrate was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% FA in water / ACN) to afford tert-butyl 2-(1-((8- fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (190 mg, 35%) as a yellow solid. ESI-MS (M+1) +: 552.3. Step 4: Preparation of N-(2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. To a mixture of tert-butyl 2-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (40 mg, 0.075 mmol) in DCM (1 mL) was added HCl/dioxane (1 mL, 6 mmol) dropwise at room temperature under nitrogen atmosphere. The resulting mixture was stirred for 1 hour at room temperature under nitrogen atmosphere. The resulting mixture was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% NH4HCO3 in water / ACN) to afford N-(2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9- diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide (10 mg, 30%) as a yellow solid. ESI-MS (M+1) +: 452.2.1H NMR (400 MHz, CD3OD) δ 8.69 (d, J = 1.5 Hz, 1H), 7.77 (d, J = 6.1 Hz, 1H), 7.62 (d, J = 2.3 Hz, 1H), 7.10 (dd, J = 12.0, 1.6 Hz, 1H), 6.16 (d, J = 6.2 Hz, 1H), 3.98 (dt, J = 10.1, 7.0 Hz, 2H), 3.76 – 3.60 (m, 5H), 3.53 (d, J = 10.7 Hz, 1H), 3.42 – 3.33 (m, 2H), 2.85 (dt, J = 9.7, 8.7 Hz, 4H), 2.39 (s, 3H), 2.27 – 2.19 (m, 1H), 1.92 (dt, J = 13.1, 8.7 Hz, 1H). Example 257 – Preparation of (S)-4-(3-butylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1- carboxamide hydrochloride.
Figure imgf000398_0001
Step 1: Preparation of tert-butyl (S)-2-butyl-4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [0734] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine (106 mg, 0.689 mmol) in DIEA (0.1 mL) was added tert-butyl (S)-2-butylpiperazine-1-carboxylate (200 mg, 0.826 mmol) and the mixture was stirred at 140 ℃ for 16 hours. After cooled, the mixture was diluted with H2O (30 mL) and extracted with DCM (30 mL x 2). The organic layers were washed with brine (30 mL), dried over Na2SO4, concentrated in vacuo. The crude was purified by silica gel chromatography eluted with (PE: EtOAc=3:1) to give the title compound (150 mg, yield: 60 %) as a yellow solid. ESI-MS (M+H) +: 361.4.1H NMR (400 MHz, CDCl3) δ 7.67 (d, J = 6.1 Hz, 1H), 6.08 (d, J = 6.1 Hz, 1H), 4.19 – 4.12 (m, 1H), 4.05 – 3.97 (m, 1H), 3.61 – 3.55 (m, 2H), 3.48 – 3.40 (m, 2H), 3.15 – 3.03 (m, 3H), 2.96 – 2.92 (m, 1H), 2.85 – 2.80 (m, 1H), 1.48 (s, 9H), 1.35 – 1.24 (m, 6H), 0.90 (t, J = 7.2 Hz, 3H). Step 2: Preparation of tert-butyl (S)-2-butyl-4-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin- 6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [0735] To a mixture of tert-butyl (S)-2-butyl-4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (100 mg, 0.278 mmol) and TEA (140 mg, 1.39 mmol) in THF (5 mL) was added triphosgene (99 mg, 0.333 mmol) and 8-fluoro-2-methylimidazo[1,2-a] pyridin-6-amine (50 mg, 0.306 mmol) at 0 ℃ under N2 atmosphere. The mixture was stirred at room temperature for 16 hours. The mixture was concentrated in vacuo and purified by pre-HPLC (0.1% FA in water/CH3CN) to obtain the title product (50 mg, yield: 22 %) as a yellow solid. ESI-MS (M+H) +: 552.7.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 8.82 (d, J = 1.5 Hz, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.7 Hz, 1H), 7.24 (dd, J = 12.5, 1.5 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.12 – 4.04 (m, 1H), 4.01 – 3.97 (m, 2H), 3.65 – 3.59 (m, 2H), 3.18 – 2.85 (m, 6H), 2.33 (s, 3H), 1.79 – 1.68 (m, 1H), 1.58 – 1.50 (m, 1H), 1.42 (s, 9H), 1.34 – 1.22 (m, 4H), 0.86 (t, J = 7.1 Hz, 3H). Step 3: Preparation of (S)-4-(3-butylpiperazin-1-yl)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide hydrochloride. A mixture of tert-butyl (S)-2-butyl-4-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (40 mg, 0.073 mmol) in HCl/dioxane (3 mL, 4M) was stirred at room temperature for 1 hour. The mixture was concentrated in vacuo and purified by pre-HPLC (0.05% HCl in water/CH3CN) to obtain title product (5 mg, yield: 14 %) as a yellow solid. ESI-MS (M+H) +: 452.5.1H NMR (400 MHz, DMSO-d6) δ 12.17 (s, 1H), 9.77 – 9.46 (m, 2H), 9.32 – 9.14 (m, 1H), 8.24 (s, 1H), 8.11 – 7.92 (m, 2H), 6.79 – 6.62 (m, 1H), 4.14 – 4.04 (m, 2H), 3.95 – 3.84 (m, 3H), 3.35 – 3.29 (m, 2H), 3.25 – 3.20 (m, 2H), 3.15 – 3.07 (m, 2H), 2.48 (s, 3H), 1.74 – 1.61 (m, 2H), 1.44 – 1.30 (m, 4H), 0.91 (t, J = 6.9 Hz, 3H). Example 267 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000400_0001
Step 1: Preparation of tert-butyl 3-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-3,8-diazabicyclo [3.2.1] octane-8- carboxylate. [0736] To a mixture of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-3,8- diazabicyclo [3.2.1] octane-8-carboxylate (100 mg, 0.303 mmol) and TEA (153 mg, 1.515 mmol) in THF (3 mL) was added triphosgene (108 mg, 0.364 mmol) and 8-fluoro-2- methylimidazo[1,2-a] pyridin-6-amine (55 mg, 0.333 mmol) at 00C under N2 atmosphere. The mixture was stirred at room temperature for 16 hours. The mixture was concentrated in vacuo and the residue was purified by pre-HPLC (0.1% FA in water/CH3CN) to obtain title product (40 mg, yield: 25 %) as a yellow solid. ESI-MS (M+H) +: 522.3.1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 8.82 (d, J = 1.5 Hz, 1H), 8.29 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.7 Hz, 1H), 7.26 – 7.22 (m, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.21 (s, 2H), 3.97 (t, J = 8.5 Hz, 2H), 3.54 (d, J = 11.2 Hz, 2H), 3.19 (t, J = 8.6 Hz, 2H), 3.01 (d, J = 11.5 Hz, 2H), 2.32 (s, 3H), 1.88 – 1.78 (m, 4H), 1.43 (s, 9H). Step 2: Preparation of 4-(3,8-diazabicyclo [3.2.1] octan-3-yl)-N-(8-fluoro-2- methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide hydrochloride. A mixture of tert-butyl 3-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8-carboxylate (40 mg, 0.077 mmol) in HCl/dioxane (3 mL, 4M) was stirred at room temperature for 1 hour. The mixture was concentrated in vacuo and the residue was purified by pre-HPLC (0.05% HCl in water/CH3CN) to obtain title product (12 mg, yield: 37 %) as a yellow solid. ESI-MS (M+H) +: 422.4.1H NMR (400 MHz, DMSO-d6) δ 12.17 (s, 1H), 9.89 (s, 1H), 9.63 (s, 1H), 9.23 (s, 1H), 8.27 (s, 1H), 8.15 (d, J = 10.9 Hz, 1H), 7.93 (d, J = 6.0 Hz, 1H), 6.68 (s, 1H), 4.11 (s, 4H), 3.76 (s, 2H), 3.52 (s, 2H), 3.29 (s, 2H), 2.49 (s, 3H), 2.05 – 1.98 (m, 2H), 1.93 (d, J = 8.0 Hz, 2H). Example 273 – Preparation of (R)-4-(3-(cyclopropylamino)pyrrolidin-1-yl)-N-(7-fluoro- 2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000401_0001
Step 1: Preparation of (R)-4-(3-(cyclopropylamino)pyrrolidin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0737] To a solution of (R)-4-(3-aminopyrrolidin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (50 mg, 0.13 mmol) and (1-ethoxycyclopropoxy) trimethylsilane (44 mg, 0.25 mmol) in MeOH / THF (2 mL, 1:1) was added TEA (67 mg, 0.65 mmol) at RT for 1 h. Then NaBH3CN (25 mg, 0.39 mmol) was added to the mixture and stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (22.79 mg, yield: 40 %) as a white solid. ESI-MS (M+H) +:436.0.1H NMR (400 MHz, MeOD-d4) δ 9.59 (s, 1H), 7.92 (s, 1H), 7.87 – 7.74 (m, 2H), 6.34 (d, J = 6.2 Hz, 1H), 4.18 – 4.07 (m, 3H), 4.04 – 3.95 (m, 1H), 3.91 – 3.79 (m, 2H), 3.79 – 3.68 (m, 1H), 3.50 – 3.46 (m, 2H), 2.93 – 2.86 (m, 1H), 2.55 – 2.48 (m, 4H), 2.35 – 2.23 (m, 1H), 1.03 – 0.92 (m, 4H).
Example 274 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000402_0001
Step 1: Preparation of 3-cyclopropylpyridin-2-amine. [0738] To a solution of 3-bromopyridin-2-amine (10 g, 58.14 mmol) in toluene (100 mL) and H2O (10 mL) were added cyclopropylboronic acid (6.5 g, 75.58 mmol). Pcy3 (1.63 g, 5.81 mmol), K3PO4 (42 g, 200.00 mmol) and Pd(OAc)2 (650 mg, 2.91 mmol). The mixture was stirred at 90 ℃ for 16 h. The reaction mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3). The combined organic layer was washed with brine (200 mL x 3), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (6.4 g, yield: 82 %) as a yellow oil.1H NMR (400 MHz, CDCl3) δ 7.98 – 7.90 (m, 1H), 7.25 (d, J = 7.3 Hz, 1H), 6.60 (dd, J = 7.3, 5.1 Hz, 1H), 4.72 (s, 2H), 1.68 – 1.57 (m, 1H), 0.96 – 0.89 (m, 2H), 0.62 – 0.56 (m, 2H). Step 2: Preparation of 5-bromo-3-cyclopropylpyridin-2-amine. [0739] To a mixture of 3-cyclopropylpyridin-2-amine (6.2 g, 46.27 mmol) in ACN (100 mL) were added NBS (8.65 g, 48.58 mmol). The reaction mixture was stirred at r.t for 30 min and concentrated in vacuo. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (100 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=5:1) to give title product (8 g, yield: 81 %) as a yellow solid. ESI- MS (M+H) +:214.9.1H NMR (400 MHz, CDCl3) δ 7.97 (d, J = 2.2 Hz, 1H), 7.37 – 7.31 (m, 1H), 4.77 (s, 2H), 1.61 (tt, J = 8.3, 5.4 Hz, 1H), 0.97 – 0.92 (m, 2H), 0.63 – 0.58 (m, 2H). Step 3: Preparation of 6-bromo-8-cyclopropyl-2-methylimidazo[1,2-a]pyridine. [0740] To a solution of 5-bromo-3-cyclopropylpyridin-2-amine (6.1 g, 28.78 mmol) in IPA (100 mL) were added 1-bromo-2,2-dimethoxypropane (7.9 g, 43.17 mmol) and PPTS (722 mg, 2.88 mmol). The mixture was stirred at 90 ℃ for 16 h. The reaction mixture was concentrated in vacuo, the residue was diluted with sat. NaOH (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=3:1) to give title product (5 g, yield: 69 %) as a yellow oil. ESI-MS (M+H) +:252.9.1H NMR (400 MHz, CDCl3) δ 7.99 (s, 1H), 7.29 (s, 1H), 6.63 (s, 1H), 2.62 – 2.55 (m, 1H), 2.47 (s, 3H), 1.18 – 1.12 (m, 2H), 0.86 (dd, J = 5.9, 4.0 Hz, 2H). Step 4: Preparation of N-(8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0741] To a solution of 6-bromo-8-cyclopropyl-2-methylimidazo[1,2-a]pyridine (4.3 g, 17.13 mmol) in 1,4-dioxane (100 mL) were added diphenylmethanimine (3.3 g, 17.98 mmol), Pd(OAc)2 (385 mg, 1.71 mmol), BINAP (2.1 g, 3.43 mmol) and Cs2CO3 (11.2 g, 34.26 mmol). The mixture was stirred at 115 ℃ for 16 h. The reaction mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (6 g, yield: 99 %) as a yellow solid. ESI-MS (M+H) +:352.3. Step 5: Preparation of 8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride. [0742] To a solution of N-(8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (6 g, 17.05 mmol) in EA (60 mL) was added 4M HCl/EA (60 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered, washed with EA (60 mL) and dried in vacuo to give title product (2.9 g, 75%) as a white solid. ESI-MS (M+H) +:188.2.1H NMR (400 MHz, DMSO-d6) δ 7.96 (s, 1H), 7.91 (s, 1H), 7.02 (s, 1H), 5.13 (s, 2H), 2.46 (s, 3H), 2.36 – 2.34 (m, 1H), 1.18 – 1.11 (m, 2H), 0.85 – 0.77 (m, 2H). Step 6: Preparation of tert-butyl 7-(1-((8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0743] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) in THF (20 mL) were added TEA (759 mg, 7.50 mmol) and triphosgene (143 mg, 0.48 mmol) (in THF (1 mL )) at 0 ℃. The reaction mixture was stirred at r.t for 1 h. Then 8-cyclopropyl-2-methylimidazo[1,2- a]pyridin-6-amine hydrochloride (136 mg, 0.61 mmol) was added to the reaction solution and stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (50 mg, yield: 30 %) as a yellow solid. ESI-MS (M+H) +:544.2.1H NMR (400 MHz, DMSO-d6) δ 11.59 (s, 1H), 8.75 (d, J = 1.8 Hz, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.66 (s, 1H), 6.65 (d, J = 1.7 Hz, 1H), 6.55 – 6.48 (m, 1H), 3.96 (t, J = 8.6 Hz, 2H), 3.56 (s, 2H), 3.30 – 3.26 (m, 2H), 3.14 – 3.06 (m, 4H), 2.35 – 2.32 (m, 3H), 1.42 (s, 9H), 1.04 – 0.99 (m, 4H), 0.96 – 0.92 (m, 2H), 0.86 – 0.84 (m, 2H). Step 7: Preparation of N-(8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0744] To a mixture of tert-butyl 7-(1-((8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (40 mg, 0.74 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (35.78 mg, 86%) as a white solid. ESI-MS (M+H) +:444.1.1H NMR (400 MHz, MeOD-d4) δ 9.16 (d, J = 1.7 Hz, 1H), 8.03 (d, J = 6.2 Hz, 1H), 7.94 (s, 1H), 7.49 (s, 1H), 6.67 (d, J = 6.3 Hz, 1H), 4.16 (t, J = 8.7 Hz, 2H), 3.71 – 3.64 (m, 2H), 3.54 – 3.49 (m, 4H), 3.22 (t, J = 8.2 Hz, 2H), 2.57 (s, 3H), 2.27 – 2.16 (m, 1H), 1.28 – 1.22 (m, 2H), 1.15 (t, J = 6.8 Hz, 2H), 1.09 (t, J = 6.8 Hz, 2H), 0.99 (q, J = 4.8 Hz, 2H). Example 275 – Preparation of N-(8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000405_0001
Step 1: Preparation of tert-butyl 4-(1-((8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0745] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (150 mg, 0.49 mmol) in THF (20 mL) were added TEA (1.24 g, 12.25 mmol) and triphosgene (232 mg, 0.78 mmol) (in THF (1 mL )) at 0 ℃. The reaction mixture was stirred at r.t for 1 h. Then 8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (221 mg, 0.99 mmol) was added to the reaction solution and stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (50 mg, yield: 19 %) as a yellow solid. ESI-MS (M+H) +:518.3. 1H NMR (400 MHz, DMSO-d6) δ 11.71 (s, 1H), 8.86 (s, 1H), 7.95 (d, J = 6.2 Hz, 1H), 7.77 (s, 1H), 6.88 – 6.73 (m, 1H), 6.55 (d, J = 6.3 Hz, 1H), 4.00 – 3.96 (m, 2H), 3.45 – 3.43 (m, 4H), 3.29 – 3.27 (m, 4H), 3.14 – 3.12 (m, 2H), 2.36 – 2.33 (m, 4H), 1.43 (s, 9H), 1.27 – 1.22 (m, 4H). [0746] Step 2: Preparation of N-(8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0747] To a mixture of tert-butyl 4-(1-((8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.77 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (26.16 mg, 63%) as a white solid. ESI-MS (M+H) +:418.4.1H NMR (400 MHz, MeOD-d4) δ 9.15 (d, J = 1.7 Hz, 1H), 8.03 (d, J = 6.6 Hz, 1H), 7.94 (s, 1H), 7.51 (s, 1H), 6.70 (d, J = 6.0 Hz, 1H), 4.20 – 4.15 (m, 2H), 3.65 – 3.60 (m, 4H), 3.41 – 3.38 (m, 4H), 3.27 – 3.19 (m, 2H), 2.57 (s, 3H), 2.27 – 2.17 (m, 1H), 1.24 (dd, J = 8.4, 2.0 Hz, 2H), 0.99 (dd, J = 8.0, 3.3 Hz, 2H). Example 276 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6- methyl-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000406_0001
Step 1: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0748] To a solution of tert-butyl 4-(6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (50 mg, 0.16 mmol) and 8-fluoro-2-methylimidazo [1,2- a]pyridin-6-amine (31 mg, 0.19 mmol) in THF (2 mL) were added TEA (1 mL) and triphosgene (56 mg, 0.19 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (89 mg, 79%) as a green solid. ESI-MS (M+H) +: 510.2.1H NMR (400 MHz, DMSO-d6) δ 11.96 (s, 1H), 8.83 (d, J = 1.6 Hz, 1H), 7.85 (d, J = 2.6 Hz, 1H), 7.49 (d, J = 1.7 Hz, 1H), 6.63 (dd, J = 13.1, 1.7 Hz, 1H), 4.01 – 3.95 (m, 2H), 3.45 – 3.43 (m, 4H), 3.28 – 3.25 (m, 4H), 3.13 – 3.06 (m, 2H), 2.44 (s, 3H), 2.26 (s, 3H), 1.43 (s, 9H). Step 2: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0749] To a solution of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.14 mmol) in EA ( 2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (56.85 mg, yield: 76 %) as a white solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, DMSO-d6) δ 12.17 (s, 1H), 9.19 (d, J = 1.1 Hz, 1H), 9.05 (s, 2H), 8.19 (s, 1H), 7.83 (d, J = 11.7 Hz, 1H), 6.52 (s, 1H), 4.06 – 3.96 (m, 2H), 3.54 – 3.46 (m, 4H), 3.27 – 3.19 (m, 4H), 3.15 – 3.06 (m, 2H), 2.48 (s, 3H), 2.46 (s, 3H). Example 277 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (2,2,6,6-tetramethylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000407_0001
Step 1: Preparation of 2,2,6,6-tetramethyl-1,2,3,6-tetrahydropyridin-4-yl trifluoromethanesulfonate. [0750] To a solution of 2,2,6,6-tetramethylpiperidin-4-one (4 g, 25.81 mmol) in THF (100 mL) was added NaHDMS (51 mL, 51.61 mmol) at -78 oC. The reaction was stirred for 15 mins, 1,1,1-trifluoro-N-phenyl-N-((trifluoromethyl)sulfonyl) methanesulfonamide (1.4 g, 38.71 mmol) was added to the mixture slowly and warmed to rt before quenched by sat NaHCO3 (100 mL). The solution was extracted with EA (200 mL), dried over Na2SO4, concentrated and purified by SGC (EA/PE=1%) to give the product as a yellow oil (2 g, 27% yield). ESI-MS (M+H) +: 288.0.1H NMR (400 MHz, CDCl3) δ 5.73 (s, 1H), 2.21 (s, 2H), 1.33 – 1.23 (m, 12H) Step 2: Preparation of tert-butyl 4-(2,2,6,6-tetramethyl-1,2,3,6-tetrahydropyridin-4-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0751] To a solution of tert-butyl 4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (3.9 g, 11.27 mmol) in dixoane/H2O (50 mL/10 mL) were added 2,6,6-tetramethyl-1,2,3,6-tetrahydropyridin-4-yl trifluoromethanesulfonate (4.9 g, 16.91 mmol), K2CO3 (2.3 g, 16.91 mmol) and Pd(pddf)Cl2 (823 mg, 1.13 mmol). The reaction was stirred for 5 h at 100 oC under Ar. The mixture was diluted with water (200 mL), extracted with EA (400 mL). The organic layer was dried over Na2SO4, concentrated and purified by SGC (DCM/MEOH=10/1) to give product (1 g, 24% yield) as a black oil. ESI-MS (M+H) +: 358.1 [0752] 1H NMR (400 MHz, CDCl3) δ 8.21 (d, J = 5.6 Hz, 1H), 6.65 (d, J = 5.6 Hz, 1H), 5.72 (s, 1H), 3.98 (t, J = 8.5 Hz, 2H), 3.06 (t, J = 8.5 Hz, 2H), 2.41 (s, 2H), 1.56 (s, 9H), 1.49-1.47 (m, 12H). Step 3: Preparation of tert-butyl 4-(2,2,6,6-tetramethylpiperidin-4-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxylate. [0753] To a solution of tert-butyl 4-(2,2,6,6-tetramethyl-1,2,3,6-tetrahydropyridin-4-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxylate (800 mg, 2.24 mmol) in MeOH (20 mL) was added Pd/C (800 mg, 10% w.t). The reaction was stirred at 25 oC for 5 h under H2.The mixture was filtered and the filtrate was concentrated to give product (400 mg, 50% yield) as a yellow oil. ESI-MS (M+H) +: 360.2.1H NMR (400 MHz, CDCl3) δ 8.22 (d, J = 5.6 Hz, 1H), 6.73 (d, J = 5.2 Hz, 1H), 4.07 – 3.94 (m, 2H), 3.10 – 2.92 (m, 3H), 1.58 – 1.46 (m, 21H). Step 4: Preparation of 4-(2,2,6,6-tetramethylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine. [0754] To a solution of tert-butyl 4-(2,2,6,6-tetramethylpiperidin-4-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine-1-carboxylate (500 mg, 1.39 mmol) in DCM (5 mL) was added TFA (5 mL) and the reaction was stirred at rt for 16 h . The reaction was concentrated, basified by sat. Na2CO3 solution (20 mL), extracted with DCM (20 mLx3) and concentrated to give product (250 mg, 69% yield) as a yellow solid. ESI-MS (M+H) +: 260.2.1H NMR (400 MHz, CDCl3) δ 7.80 (d, J = 5.6 Hz, 1H), 6.41 (d, J = 5.6 Hz, 1H), 4.48 (s, 1H), 3.68 – 3.54 (m, 2H), 3.13 – 2.92 (m, 2H), 1.41 – 1.23 (m, 12H). Step 5: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(2,2,6,6- tetramethylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0755] To a solution of 4-(2,2,6,6-tetramethylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (80 mg, 30.88 mmol) in THF (5.0 mL) were added phenyl (7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamate (88 mg, 30.88 mmol ) and TEA (94 mg, 92.64 mmol). The reaction was stirred at 70 oC for 16 h. The mixture was concentrated and slurry in MeOH (2 mL) to give a white solid. The white solid was added to a mixture of CH3CN (10 mL) and TFA (0.5% in water, 25 mL). The mixture was concentrated in vacuo at 40 oC and lyophilized to give product (45.6 mg, 26% yield) as a white powder. ESI-MS (M+H) +: 451.3. 1H NMR (400 MHz, DMSO-d6) δ 12.09 (s, 1H), 9.68 (d, J = 6.0 Hz, 1H), 8.77 (d, J = 10.0 Hz, 1H), 8.17 (s, 2H), 8.09 (d, J = 10.0 Hz, 1H), 7.89 (d, J = 11.6 Hz, 1H), 6.96 (d, J = 5.2 Hz, 1H), 4.13 (t, J = 8.3 Hz, 2H), 3.32 – 3.15 (m, 3H), 2.45 (s, 3H), 1.88 – 1.64 (m, 4H), 1.46-1.44 (m, 12H).
Example 278 – Preparation of 5-cyano-4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000410_0001
Step 1: Preparation of 1-benzyl 4-(tert-butyl) 2,2-dimethylpiperazine-1,4-dicarboxylate [0756] To a solution of tert-butyl 3,3-dimethylpiperazine-1-carboxylate (9.5 g, 44.39 mmol) in THF (200 mL) and H2O (20 mL) were added NaHCO3 (11.2 g, 133.18 mmol) and CbzCl (9.1 g, 53.27 mmol) and the mixture was stirred at 30 °C for 3 h. The mixture was poured into water (500 mL), extracted with EA (150 mL × 3) and the combined organic was washed with brine (500 mL) and dried over Na2SO4. The crude product was purified by column flash chromatography (EA/PE = 1/5) to afford the product (7 g, 45.4% yield) as colorless oil.1H NMR (400 MHz, CDCl3) δ 7.40 – 7.28 (m, 5H), 5.12 (s, 2H), 3.73 – 3.67 (m, 2H), 3.49 – 3.36 (m, 4H), 1.46 (s, 9H), 1.40 (s, 6H). Step 2: Preparation of benzyl 2,2-dimethylpiperazine-1-carboxylate. [0757] To a solution of 1-benzyl 4-(tert-butyl) 2,2-dimethylpiperazine-1,4-dicarboxylate (2.3 g, 6.61 mmol) in DCM (15 mL) was added TFA (5 mL) and the reaction was stirred at rt for 16 h. The mixture was poured into aqueous NH4HCO3 (150 mL), extracted with DCM (50 mL × 3) and the combined organic was washed with brine (200 mL) and dried over Na2SO4. The crude product was used next step without purification. ESI-MS (M+H) +: 249.2.1H NMR (400 MHz, DMSO-d6) δ 7.45 – 7.30 (m, 5H), 5.04 (s, 2H), 3.48 – 3.38 (m, 2H), 2.88 – 2.80 (m, 2H), 2.67 (s, 2H), 1.34 (s, 6H). Step 3: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0758] To a solution of benzyl 2,2-dimethylpiperazine-1-carboxylate (1.5 g, 6.054 mmol) in 1,4-Dioxane (80 mL) were added tert-butyl 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine- 1-carboxylate (1.81 g, 6.05 mmol), Pd2(dba)3 (554 mg, 0.61 mmol), Xantphos (706 mg, 1.22 mmol) and K3PO4 (3.85 g, 0.61 mmol) and the reaction was stirred at 100 °C for 16 h. The mixture was concentrated to dryness and the crude product was purified by column flash chromatography (EA = 95%) to afford the product (640 mg, 23% yield) as a white solid. ESI- MS (M+H) +: 467.2.1H NMR (400 MHz, DMSO-d6) δ 7.78 (d, J = 5.9 Hz, 1H), 7.39 – 7.32 (m, 5H), 6.34 (d, J = 6.0 Hz, 1H), 5.08 (s, 2H), 3.85 – 3.78 (m, 2H), 3.76 – 3.71 (m, 2H), 3.48 – 3.43 (m, 2H), 3.39 (s, 2H), 3.17 – 3.08 (m, 2H), 1.46 (s, 9H), 1.38 (s, 6H). Step 4: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-5- bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate [0759] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (640 mg, 1.37 mmol) in DCM (20 mL) were added NBS (220 mg, 1.23 mmol) at 0 °C and the mixture was stirred at 0 °C for 1 h. The mixture was quenched with water (100 mL), extracted with DCM (40 mL × 3) and the combined organic was washed with brine (150 mL), dried over Na2SO4, filtered and concentrated in vacuo. The crude product was purified by column flash chromatography (EA/PE = 1/1) to afford the product (700 mg, 93.7% yield) as a white solid. ESI-MS (M+H) +: 543.2.1H NMR (400 MHz, DMSO-d6) δ 8.09 (s, 1H), 7.41 – 7.29 (m, 5H), 5.07 (s, 2H), 3.94 – 3.84 (m, 2H), 3.69 – 3.60 (m, 2H), 3.27 – 3.17 (m, 4H), 3.12 (s, 2H), 1.47 (s, 9H), 1.42 (s, 6H). Step 5: Preparation of benzyl 4-(5-cyano-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [0760] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-5- bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (650 mg, 1.19 mmol) in DMA (5 mL) were added Pd2(dba)3 (56 mg, 0.06 mmol), DPPF (69 mg, 0.12 mmol), Zn(CN)2 (139 mg, 1.19 mmol) and Zn (4 mg, 0.60 mmol). The reaction mixture was stirred at 140 °C for 2 h under N2. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=2/1) to give title product (250 mg, 42.74 % yield) as a yellow solid. ESI-MS (M+H) +: 392.3. Step 6: Preparation of benzyl 4-(5-cyano-1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0761] To a solution of benzyl 4-(5-cyano-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (250 mg, 0.64 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (158 mg, 0.96 mmol) in THF (10 mL) were added TEA (323 mg, 3.20 mmol) and triphosgene (247 mg, 0.83 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column chromatography (DCM/MeOH=20/1) to give title product (55 mg, 14.78 % yield) as a yellow solid. ESI-MS (M+H) +: 583.3. Step 7: Preparation of 5-cyano-4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0762] To a solution of benzyl 4-(5-cyano-1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (55 mg, 0.09 mmol) in DCM (3 mL) was added HBr in AcOH (0.5 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (4.0 mg, 8.57 % yield) as a yellow solid. ESI-MS (M+H) +: 449.2.1H NMR (400 MHz, MeOD-d4) δ 9.17 (d, J = 7.2 Hz, 1H), 8.46 (s, 1H), 8.35 (s, 1H), 7.55 (s, 1H), 7.26 (d, J = 10.8 Hz, 1H), 4.15 (t, J = 8.8 Hz, 2H), 3.64 (d, J = 5.2 Hz, 2H), 3.47 (s, 2H), 3.44 – 3.39 (m, 2H), 3.32 (d, J = 3.6 Hz, 2H), 2.36 (s, 3H), 1.48 (s, 6H). Example 279 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-6-fluoro-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide trifluoroacetate.
Figure imgf000413_0001
Step 1: Preparation of tert-butyl (2-(2,6-difluoro-4-iodopyridin-3-yl)ethyl)carbamate. [0763] To a solution of 2,6-difluoro-4-iodopyridine (10 g, 41.49 mmol) in dry THF (200 mL) was added LDA (25 mL, 50.00 mmol, 2.0 M in THF) at -78 oC in Ar. The reaction was stirred for 60 min. A solution of tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (11.1 g, 49.79 mmol) in THF (200 mL) was added dropwise to the mixture and stirred for 2 h. The mixture was quenched by sat NH4Cl (200 mL) at -78 °C. The solution was extracted with EA (300 mL), dried over Na2SO4, concentrated and purified by SGC (EA/PE=1) to give product (6 g, 37.60 % yield) as a white solid. ESI-MS (M+H-t-Bu) +: 328.8.1H NMR (400 MHz, CDCl3) δ 7.31 (d, J = 3.2 Hz, 1H), 4.62 (s, 1H), 3.46 – 3.30 (m, 2H), 3.03 – 2.85 (m, 2H), 1.41 (s, 9H). Step 2: Preparation of tert-butyl 6-fluoro-4-iodo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate. [0764] To a solution of tert-butyl (2-(2,6-difluoro-4-iodopyridin-3-yl)ethyl)carbamate (4 g, 10.42 mmol) in THF (100 mL) was added NaH (833 mg, 20.84 mmol) at RT. The mixture was stirred at RT for 1 h. The reaction was quenched by sat NH4Cl (100 mL) and extracted with EA (200 mL), dried over Na2SO4, concentrated in vacuo and purified by SGC (PE/EA=1/1) to give product (1.6 g, 42.1% yield) as a white solid. ESI-MS (M+H) +: 364.9. 1H NMR (400 MHz, CDCl3) δ 6.83 (d, J = 2.4 Hz, 1H), 4.17 – 3.91 (m, 2H), 3.08 – 2.83 (m, 2H), 1.56 (s, 9H). Step 3: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-6- fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0765] To a solution of tert-butyl 6-fluoro-4-iodo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate (900 mg, 2.47 mmol) in 1,4-Dioxane (10 mL) were added Pd2(dba)3 (238 mg, 0.25 mmol), Xantphos (289 mg, 0.50 mmol) and Cs2CO3 (1.6 g, 4.94 mmol). The reaction mixture was stirred at 100 °C for 16 h under N2. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=2/1) to give title product (220 mg, 18.38 % yield) as a yellow solid. ESI-MS (M+H) +: 485.3. Step 4: Preparation of benzyl 4-(6-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [0766] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-6- fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (220 mg, 0.45 mmol) in DCM (5 mL) was added TFA (4 mL). The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column chromatography (DCM/MeOH=20/1) to give title product (110 mg, 63.22 % yield) as a yellow oil. ESI-MS (M+H) +: 385.2. Step 5: Preparation of benzyl 4-(6-fluoro-1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0767] To a solution of benzyl 4-(6-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (110 mg, 0.29 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (71 mg, 0.43 mmol) in THF (10 mL) were added TEA (146 mg, 1.45 mmol) and triphosgene (112 mg, 0.38 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by column chromatography (DCM/MeOH=20/1) to give title product (65 mg, 39.20 % yield) as a yellow solid. ESI-MS (M+H) +: 576.3. Step 6: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-6-fluoro-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide trifluoroacetate. [0768] To a solution of benzyl 4-(6-fluoro-1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (65 mg, 0.11 mmol) in DCM (3 mL) was added HBr in AcOH (0.5 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (2.7 mg, 4.31 % yield) as a yellow solid. ESI-MS (M+H) +: 442.2.1H NMR (400 MHz, MeOD-d4) δ 9.62 (d, J = 6.4 Hz, 1H), 7.93 (s, 1H), 7.81 (d, J = 9.6 Hz, 1H), 6.30 (d, J = 1.2 Hz, 1H), 4.24 – 4.14 (m, 2H), 3.65 – 3.56 (m, 2H), 3.45 – 3.40 (m, 4H), 3.22 (t, J = 8.4 Hz, 2H), 2.51 (s, 3H), 1.49 (s, 6H). Example 280 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)azetidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000415_0001
p Step 1: Preparation of tert-butyl (1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3- yl)(methyl)carbamate. [0769] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (300 mg, 1.94 mmol) and tert-butyl azetidin-3-yl(methyl)carbamate (541 mg, 2.91 mmol) was added DIEA (2 mL) in a sealed tube. The reaction mixture was stirred at 120 °C for 16 h. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=1/2) to give title product (150 mg, 25.51 %) as a yellow solid. ESI-MS (M+H) +: 305.0. Step 2: Preparation of tert-butyl (1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)(methyl)carbamate. [0770] To a solution of tert-butyl (1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3- yl)(methyl)carbamate (150 mg, 0.49 mmol) and 7-fluoro-2-methylimidazo[1,2-a]pyridin-6- amine (165 mg, 0.74 mmol) in THF (5 mL) were added TEA (247 mg, 2.45 mmol) and triphosgene (146 mg, 0.49 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by (PE/EA=0/1) to give title product (50 mg, 20.49 %) as a yellow solid. ESI-MS (M+H) +: 496.3. Step 3: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methylamino)azetidin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0771] To a solution of tert-butyl (1-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)(methyl)carbamate (50 mg, 0.10 mmol) in EA (2 mL) was added 4 M HCl/EA (2 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (1.56 mg, 3.91 %) as a yellow solid. ESI-MS (M+H) +: 396.1.1H NMR (400 MHz, MeOD-d4) δ 9.57 (d, J = 6.4 Hz, 1H), 7.92 (s, 1H), 7.85 (d, J = 6.1 Hz, 1H), 7.79 (d, J = 9.6 Hz, 1H), 6.18 (d, J = 6.0 Hz, 1H), 4.59 – 4.47 (m, 2H), 4.32 – 4.23 (m, 2H), 4.22 – 4.10 (m, 3H), 3.27 – 3.20 (m, 2H), 2.77 (s, 3H), 2.51 (s, 3H).
Example 281 – Preparation of 6-fluoro-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)- 4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000417_0001
Step 1: Preparation of tert-butyl (2-(2,6-difluoro-4-iodopyridin-3-yl)ethyl)carbamate. [0772] To a solution of 2,6-difluoro-4-iodopyridine (10 g, 41.49 mmol) in dry THF (200 mL) was added LDA (25 mL, 50.00 mmol, 2.0 M in THF) at -78 oC in Ar. The reaction was stirred for 60 min. A solution of tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (11.1 g, 49.79 mmol) in THF (200 mL) was added dropwise to the mixture and stirred for 2 h. The mixture was quenched by sat NH4Cl (200 mL) at -78 °C. The solution was extracted with EA (300 mL), dried over Na2SO4, concentrated and purified by SGC (EA/PE=1) to give product (6 g, 37.60 % yield) as a white solid. ESI-MS (M+H-t-Bu) +: 328.8.1H NMR (400 MHz, CDCl3) δ 7.31 (d, J = 3.2 Hz, 1H), 4.62 (s, 1H), 3.46 – 3.30 (m, 2H), 3.03 – 2.85 (m, 2H), 1.41 (s, 9H). Step 2: Preparation of tert-butyl 6-fluoro-4-iodo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate. [0773] To a solution of tert-butyl (2-(2,6-difluoro-4-iodopyridin-3-yl)ethyl)carbamate (4 g, 10.42 mmol) in THF (100 mL) was added NaH (833 mg, 20.84 mmol) at RT. The mixture was stirred at RT for 1 h. The reaction was quenched by sat NH4Cl (100 mL) and extracted with EA (200 mL), dried over Na2SO4, concentrated in vacuo and purified by SGC (PE/EA=1/1) to give product (1.6 g, 42.1% yield) as a white solid. ESI-MS (M+H) +: 364.9. 1H NMR (400 MHz, CDCl3) δ 6.83 (d, J = 2.4 Hz, 1H), 4.17 – 3.91 (m, 2H), 3.08 – 2.83 (m, 2H), 1.56 (s, 9H). Step 3: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-fluoro-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0774] To a solution of tert-butyl 6-fluoro-4-iodo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate (800 mg, 2.20 mmol) in 1,4-dioxane (20 mL) were added benzyl piperazine-1- carboxylate (580 mg, 2.64 mmol),Xantphos (127 mg, 0.22 mmol), Pd2(dba)3 (201 mg, 0.22 mmol), Cs2CO3 (59 mg, 2.64 mmol) at rt. The mixture was stirred at 100 ℃ for 16 h under Ar. The reaction was diluted with water (30 mL), extracted with EA (100 mL). The organic layer was washed with sat. NaCl (50 mL), dried over Na2SO4, concentrated and purified by SGC (PE/EA=1) to give product (400 mg, 39% yield) a yellow oil. ESI-MS (M+H) +: 457.1.1H NMR (400 MHz, CDCl3) δ 7.43 – 7.31 (m, 6H), 4.05 – 3.92 (m, 2H), 3.68 – 3.60 (m, 4H), 3.22 – 3.11 (m, 4H), 2.99 – 2.92 (m, 2H), 1.55 (s, 9H). Step 4: Preparation of benzyl 4-(6-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [0775] To a solution of tert-butyl 4-(4-((benzyloxy)carbonyl)piperazin-1-yl)-6-fluoro-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (400 mg, 0.88 mmol) in DCM (4 mL) was added TFA (4 mL). The reaction was stirred at rt for 16 h and concentrated, basified by sat. Na2CO3 solution, extracted with DCM (20 mL*3) and concentrated to give product (250 mg, 79% yield) as a yellow solid. ESI-MS (M+H) +: 357.0 Step 5: Preparation of benzyl 4-(6-fluoro-1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0776] To a solution of benzyl 4-(6-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (100 mg, 0.28 mmol) in THF (5 mL) at 0 ℃ were added Et3N (113 mg, 1.12 mmol) and TBC (83 mg,0.28 mmol) under Ar. A solution of 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (69 mg, 0.42 mmol) in THF (5 mL) was added to the mixture and stirred for 30 min at 0 ℃. The reaction was stirred at 70 ℃ for 16 h and quenched by water (20 mL),extracted with EA (30 mL),dried over Na2SO4 and concentrated in vacuo. The residue was beated with EA/PE (1/1, 5 mL) to give title product (20 mg, 13% yield) a white solid. ESI-MS (M+H) +: 548.2 Step 6: Preparation of 6-fluoro-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0777] To a solution of benzyl 4-(6-fluoro-1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (20 mg, 0.036 mmol) in DCM (1 mL) was added HBr (0.5 mL, 33% in HOAc). The mixture was stirred for 30 mins. The reaction was concentrated. The residue was diluted with DCM (20 mL) and sat NaHCO3 (10 mL). The organic layer was concentrated and purified by prep- HPLC (0.1 % TFA in H2O / ACN) to give title product (1.04 mg, 5% yield) as a white solid. ESI-MS (M+H) +: 414.1.1H NMR (400 MHz, MeOD-d4) δ 11.52 (s, 1H), 9.61 (d, J = 6.8 Hz, 1H), 7.92 (s, 1H), 7.79 (d, J = 9.6 Hz, 1H), 6.29 (d, J = 1.3 Hz, 1H), 4.30 – 4.10 (m, 2H), 3.66 – 3.56 (m, 4H), 3.42 – 3.34 (m, 4H), 3.20 (t, J = 8.4 Hz, 2H), 2.51 (s, 3H). Example 282 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methyl-4-(2,2,2-trifluoroethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000419_0001
Step 1: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methyl-4- (2,2,2-trifluoroethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0778] A mixture of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (50 mg, 0.12 mmol), 2,2,2-trifluoroethyl trifluoromethanesulfonate (85.3 mg, 0.37 mmol), K2CO3 (50.7 mg, 0.37 mmol) in ACN (1 mL) was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (2.19 mg, yield: 3.65 %) as a yellow oil. ESI-MS (M+H) +: 491.8.1H NMR (400 MHz, MeOD-d4) δ 9.50 (s, 1H), 7.93 (s, 1H), 7.86 (d, J = 6.3 Hz, 1H), 7.80 (d, J = 9.5 Hz, 1H), 6.63 (d, J = 6.3 Hz, 1H), 4.17 (t, J = 8.5 Hz, 2H), 3.64 (d, J = 11.6 Hz, 2H), 3.41 – 3.33 (m, 2H), 3.15 – 3.06 (m, 3H), 3.02 – 2.96 (m, 1H), 2.91 – 2.70 (m, 3H), 2.52 (d, J = 0.9 Hz, 3H), 1.17 (d, J = 6.2 Hz, 3H). Example 283 – Preparation of (R)-N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000420_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0779] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) and 7-fluoro-2,8-dimethylimidazo[1,2- a]pyridin-6-amine (169 mg, 0.94 mmol) in THF (10 mL) were added TEA (142 mg, 1.41 mmol) and triphosgene (279 mg, 0.94 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give crude. The crude was purified by silica gel column (PE: EA = 1: 5) to give title product (120 mg, crude) as a yellow solid. ESI-MS (M+H) +: 524.2. Step 2: Preparation of (R)-N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0780] A mixture of tert-butyl (R)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (100 mg, 0.19 mmol) in DCM (4 mL) and TFA (2 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (21 mg, Y: 26.0%) as a white solid. ESI-MS (M+H) +: 424.1.1H NMR (400 MHz, DMSO-d6) δ 12.45 (s, 1H), 9.55 (d, J = 6.2 Hz, 1H), 9.16 (s, 1H), 8.83 (s, 1H), 8.16 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.09 – 4.02 (m, 2H), 3.85 – 3.80 (m, 2H), 3.41 – 3.37 (m, 2H), 3.24 – 3.14 (m, 4H), 3.06 – 2.96 (m, 1H), 2.51 (s, 3H), 2.48 (s, 3H), 1.28 (d, J = 6.5 Hz, 3H). Example 284 – Preparation of (S)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000421_0001
Step 1: Preparation of (S)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0781] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.32 mmol) and 2-methylimidazo[1,2-a]pyridin-6- amine (46 mg, 0.32 mmol) in THF (8 mL) were added TEA (96 mg, 0.94 mmol) and triphosgene (182 mg, 0.63 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 6) to give title product (70 mg, Y: 45.5%) as a yellow solid. ESI-MS (M+H) +: 492.2. Step 2: Preparation of (S)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0782] A mixture of (S)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (60 mg, 0.12 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (50.05 mg, Y: 73.9%) as a white solid. ESI-MS (M+H) +: 392.1.1H NMR (400 MHz, DMSO-d6) δ 12.10 (s, 1H), 9.40 (s, 1H), 9.18 (s, 1H), 8.86 (s, 1H), 8.16 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 7.93 – 7.87 (m, 2H), 6.68 (d, J = 6.2 Hz, 1H), 4.04 (t, J = 8.6 Hz, 2H), 3.86 – 3.76 (m, 2H), 3.47 – 3.33 (m, 2H), 3.27 – 3.09 (m, 4H), 3.06 – 2.93 (m, 1H), 2.48 (s, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 285 – Preparation of (R)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000422_0001
Step 1: Preparation of (R)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0783] To a solution of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) and 2-methylimidazo[1,2-a]pyridin-6- amine (69 mg, 0.47 mmol) in THF (5 mL) were added TEA (1 mL) and triphosgene (110 mg, 0.37 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (53 mg, 34 %) as a white solid. ESI-MS (M+H) +: 492.1.1H NMR (400 MHz, DMSO-d6) δ 11.78 (s, 1H), 9.00 (s, 1H), 7.99 (d, J = 6.1 Hz, 1H), 7.76 (s, 1H), 7.46 (d, J = 9.5 Hz, 1H), 7.20 (dd, J = 9.5, 2.1 Hz, 1H), 6.59 (d, J = 6.2 Hz, 1H), 4.31 – 4.20 (m, 1H), 4.06 (t, J = 8.6 Hz, 2H), 3.88 – 3.81 (m, 1H), 3.74 – 3.62 (m, 2H), 3.27 – 3.09 (m, 4H), 3.04 – 2.94 (m, 1H), 2.37 (s, 3H), 1.48 (s, 9H), 1.25 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (R)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0784] To a solution of (R)-N-(2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (65.32 mg, yield: 90 %) as a white solid. ESI-MS (M+H) +: 392.1.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 9.39 (s, 1H), 9.10 (s, 1H), 8.79 (s, 1H), 8.17 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 7.94 – 7.84 (m, 2H), 6.69 (d, J = 6.2 Hz, 1H), 4.05 (t, J = 8.5 Hz, 2H), 3.88 – 3.77 (m, 2H), 3.43 – 3.34 (m, 2H), 3.25 – 3.11 (m, 4H), 3.07 – 2.96 (m, 1H), 2.48 (d, J = 0.8 Hz, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 286 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000423_0001
Step 1: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0785] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2-methylimidazo[1,2-a]pyridin-6- amine (80 mg, 0.54 mmol), triphosgene (160 mg, 0.54 mmol) and TEA (227 mg, 2.25 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH: DCM= 10 %) to give title product (50 mg, 22 %) as a yellow solid. ESI-MS (M+H) +: 506.3.1H NMR (400 MHz, CDCl3) δ 11.86 (s, 1H), 8.97 (s, 1H), 7.84 (d, J = 6.1 Hz, 1H), 7.44 (d, J = 9.4 Hz, 1H), 7.30 (s, 1H), 7.02 (d, J = 9.6 Hz, 1H), 6.22 (d, J = 6.2 Hz, 1H), 4.14 (t, J = 8.4 Hz, 2H), 3.81 – 3.77 (m, 2H), 3.57 (t, J = 5.5 Hz, 2H), 3.45 (s, 2H), 3.23 (t, J = 8.7 Hz, 2H), 2.44 (s, 3H), 1.50 (s, 9H), 1.45 (s, 6H). Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2-a]pyridin-6- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0786] A mixture of tert-butyl 2,2-dimethyl-4-(1-((2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.08 mmol) in TFA / DCM (0.5 mL / 0.5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (22.7 mg, yield: 70.06 %) as a yellow oil. ESI-MS (M+H) +: 405.9.1H NMR (400 MHz, DMSO-d6) δ 12.10 (s, 1H), 9.39 (s, 1H), 8.90 (s, 2H), 8.16 (s, 1H), 7.99 (d, J = 6.3 Hz, 1H), 7.91 – 7.86 (m, 2H), 6.67 (d, J = 6.1 Hz, 1H), 4.06 – 4.03 (m, 2H), 3.51 – 3.47 (m, 2H), 3.34 – 3.29 (m, 4H), 3.23 – 3.18 (m, 2H), 2.48 (s, 3H), 1.37 (s, 6H). Example 287 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000424_0001
Step 1: Preparation oftert-butyl (2R,6S)-4-(1-((6-ethoxy-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0787] To a solution of 6-ethoxy-2-methyl-2H-indazole-5-carboxylic acid (100 mg, 0.45 mmol) in Toluene (10 mL) were added TEA (136 mg, 1.35 mmol) and DPPA (313 mg, 1.14 mmol). The mixture was stirred at 20 oC for 1h. Then the mixture was stirred at 60 oC for another 1h. Tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (149 mg, 0.45 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:4) to provide title product (90 mg, yield: 36%) as a white solid. ESI-MS (M+H)+: 549.9. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0788] To a solution of tert-butyl (2R,6S)-4-(1-((6-ethoxy-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (80 mg, 0.15 mmol) in DCM (2 mL) was added TFA (2 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep- HPLC (0.05% TFA in H2O / ACN) to give title compound (41 mg, yield: 62%) as a white solid. ESI-MS (M+H)+: 449.9.1H NMR (400 MHz, DMSO-d6+D2O) δ 8.36 (s, 1H), 8.19 (s, 1H), 7.91 (d, J = 6.2 Hz, 1H), 7.01 (s, 1H), 6.67 (d, J = 6.3 Hz, 1H), 4.15 (q, J = 6.9 Hz, 2H), 4.10 – 4.04 (m, 5H), 3.95 – 3.95 (m, 2H), 3.89 (d, J = 12.9 Hz, 2H), 3.43 – 3.35 (m, 2H), 3.20 (t, J = 8.4 Hz, 2H), 2.98 – 2.88 (m, 2H), 1.52 (t, J = 6.8 Hz, 3H), 1.28 (d, J = 6.5 Hz, 6H). Example 288 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate.
Figure imgf000425_0001
Step 1: Preparation of tert-butyl 7-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0789] To a solution of 6-ethoxy-2-methyl-2H-indazole-5-carboxylic acid (240 mg, 1.09 mmol) in toluene (20 mL) were added TEA (370 mg, 3.64 mmol), DPPA (751 mg, 2.73 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. Then tert-butyl 7-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (300 mg, 0.91 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (150 mg, yield: 30 %) as a white solid. ESI-MS (M+H) +:548.0. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H-indazol-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate. [0790] To a solution of tert-butyl 7-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.27 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% NH3.H2O in H2O/ ACN) to give title product (50 mg, 41%) as a white solid. To a solution of crude product (50 mg, 0.11 mmol) in DCM (5 mL) and MeOH (1 mL) was added benzoate (14 mg, 0.11 mmol). The mixture was stirred at 50 o C for 2 h. Concentration under reduced pressure to give title product (46.29 mg, 29%) as a white solid. ESI-MS (M+H) +: 448.3.1H NMR (400 MHz, MeOD-d4) δ 8.44 (s, 1H), 8.01 – 7.99 (m, 2H), 7.98 – 7.94 (m, 2H), 7.54 (d, J = 7.4 Hz, 1H), 7.44 (t, J = 7.6 Hz, 2H), 6.94 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.23 – 4.16 (m, 2H), 4.13 – 4.07 (m, 5H), 3.37 – 3.34 (m, 2H), 3.19 (s, 2H), 3.14 – 3.09 (m, 4H), 1.61 (t, J = 6.9 Hz, 3H), 0.75 (d, J = 7.3 Hz, 4H). Example 289 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000426_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0791] To a solution of 6-methoxy-2-methyl-2H-indazol-5-amine hydrochloride (141 mg, 0.66 mmol) and TEA (0.92 mL, 37.60 mmol) in THF (20 mL) was added triphosgene (1.12 mg, 6.62 mmol), the mixture was stirred at 0oC for 15 min, then tert-butyl (2R,6S)-4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (200 mg, 0.60 mmol) was added slowly at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (60 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (200 mg, crude) as a yellow solid. ESI-MS (M+H) +: 536.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0792] To a mixture of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (200 mg, 0.37 mmol) in EA (1 mL) was added HCl/EA(6 mL, 4 M). The mixture was stirred at r.t for 2 h. The mixture was concentrated and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (75 mg, Y: 36.54 %) as an off-white solid. ESI-MS (M+H) +:436.3.1H NMR (400 MHz, DMSO-d6) δ 11.95 (s, 1H), 9.22 (d, J = 8.3 Hz, 1H), 8.58 (d, J = 9.8 Hz, 1H), 8.39 (s, 1H), 8.14 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 7.02 (s, 1H), 6.63 (d, J = 6.1 Hz, 1H), 4.07 (s, 3H), 4.02 (t, J = 8.5 Hz, 2H), 3.97 (s, 3H), 3.87 (d, J = 13.5 Hz, 2H), 3.47 – 3.32 (m, 2H), 3.22 – 3.14 (m, 2H), 2.95 – 2.84 (m, 2H), 1.27 (d, J = 6.5 Hz, 6H). Example 290 – Preparation of (S)-N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000427_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0793] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.38 mmol) in THF (5 mL) were added TEA (114 mg, 1.13 mmol), triphosgene (134 mg, 0.45 mmol) at 0oC. The mixture was stirred at r.t for 1 h.6-methoxy-2-methyl-2H-indazol-5-amine (80 mg, 0.45 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (80 mg, Y: 40.7 %) as a yellow solid. ESI-MS (M+H) +:522.3.1H NMR (400 MHz, DMSO-d6) δ 12.07 (s, 1H), 8.41 (s, 1H), 8.12 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.01 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.21 – 4.16 (m, 1H), 4.07 (s, 3H), 4.03 – 3.98 (m, 3H), 3.97 (s, 3H), 3.81 – 3.77 (m, 1H), 3.66 – 3.61 (m, 1H), 3.59 – 3.54 (m, 1H), 3.18 – 3.13 (m, 2H), 3.07 – 3.02 (m, 1H), 2.95 – 2.89 (m, 1H), 1.43 (s, 9H), 1.20 (d, J = 6.6 Hz, 3H). Step 2: Preparation of (S)-N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0794] To a solution of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (70 mg, 0.13 mmol) in EA (3 mL) was added 4M HCl / EA (3 mL) at r.t. The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (47.66 mg, 58.0 %) as a white solid. ESI-MS (M+H)+:422.1.1H NMR (400 MHz, DMSO-d6) δ 11.99 (s, 1H), 9.03 (s, 1H), 8.69 (s, 1H), 8.39 (s, 1H), 8.13 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 7.01 (s, 1H), 6.61 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.02 (t, J = 8.8 Hz, 2H), 3.97 (s, 3H), 3.79 (d, J = 12.0 Hz, 2H), 3.41 – 3.35 (m, 2H), 3.15 (t, J = 8.6 Hz, 4H), 2.97 (dd, J = 13.7, 10.4 Hz, 1H), 1.27 (d, J = 6.5 Hz, 3H). Example 291 – Preparation of (R)-N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000428_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0795] To a solution of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) and 6-methoxy-2-methyl-2H-indazol- 5-amine (84 mg, 0.47 mmol) in THF (5 mL) were added TEA (1 mL) and triphosgene (110 mg, 0.37 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (45 mg, 27%) as a white solid. ESI-MS (M+H) +: 522.4.1H NMR (400 MHz, DMSO-d6) δ 12.07 (s, 1H), 8.40 (s, 1H), 8.12 (s, 1H), 7.95 (d, J = 5.9 Hz, 1H), 7.00 (s, 1H), 6.50 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.03 – 3.98 (m, 2H), 3.96 (s, 3H), 3.80 (t, J = 13.4 Hz, 2H), 3.65 – 3.53 (m, 2H), 3.18 – 3.01 (m, 4H), 2.96 – 2.87 (m, 1H), 1.42 (s, 9H), 1.27 (d, J = 6.4 Hz, 3H). Step 2: Preparation of (R)-N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0796] To a solution of tert-butyl (R)-4-(1-((6-methoxy-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (30.04 mg, yield: 69 %) as a white solid. ESI- MS (M+H) +: 422.1.1H NMR (400 MHz, DMSO-d6) δ 11.94 (s, 1H), 9.10 (s, 1H), 8.78 (s, 1H), 8.38 (s, 1H), 8.14 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 7.02 (s, 1H), 6.62 (d, J = 6.1 Hz, 1H), 4.07 (s, 3H), 4.03 (t, J = 8.6 Hz, 2H), 3.97 (s, 3H), 3.86 – 3.72 (m, 2H), 3.45 – 3.32 (m, 2H), 3.24 – 3.09 (m, 4H), 3.04 – 2.93 (m, 1H), 1.27 (d, J = 6.4 Hz, 3H). Example 292 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- 2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000429_0001
Step 1: Preparation of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [0797] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 6-methoxy-2-methyl-2H-indazol-5- amine (96 mg, 0.54 mmol), triphosgene (160 mg, 0.54 mmol) and TEA (227 mg, 2.25 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH: DCM= 10 %) to give title product (60 mg, 24.92 %) as a yellow solid. ESI-MS (M+H) +: 536.2. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl-2H-indazol-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0798] A mixture of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (50 mg, 0.09 mmol) in TFA / DCM (0.5 mL / 0.5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (34.88 mg, yield: 89.09 %) as a yellow oil. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 8.90 (s, 2H), 8.39 (s, 1H), 8.13 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 7.01 (s, 1H), 6.61 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.05 – 4.00 (m, 2H), 3.96 (s, 3H), 3.48 – 3.43 (m, 2H), 3.33 – 3.27 (m, 4H), 3.16 (t, J = 8.5 Hz, 2H), 1.38 (s, 6H). Example 293 – Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate.
Figure imgf000430_0001
Step 1: Preparation of tert-butyl 7-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0799] To a solution of 6-methoxy-2-methyl-2H-indazol-5-amine (644 mg, 3.64 mmol) in THF (100 mL) were added TEA (3672 mg, 36.36 mmol) and triphosgene (1081 mg, 3.64 mmol). The mixture was stirred for 30 min. Tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (1 g, 3.03 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:3) to provide title product (600 mg, yield: 37%) as a white solid. ESI-MS (M+H)+:534.4. Step 2: Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0800] To a solution of tert-butyl 7-(1-((6-methoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (550 mg, 1.03 mmol) in EtOAc (4 mL) was added 4M HCl/EtOAc (12 mL) at 0 oC. The mixture was stirred at r.t for 2h. The precipitate was filtered, washed with EtOAc (5 mL). The solid was triturated with EtOAc (10 mL) and diluted with H2O (5 mL), adjusted pH to 8 by Na2HCO3 aqueous solution. The precipitate was filtered, washed with water and concentrated in vacuo to give title product (480 mg, yield: 98%) as a white solid. ESI-MS (M+H)+: 434.2. 1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 8.40 (s, 1H), 8.12 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.00 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.01 – 3.96 (m, 2H), 3.96 (s, 3H), 3.37 (s, 2H), 3.21 (s, 2H), 3.11 – 3.03 (m, 4H), 0.71 (d, J = 11.4 Hz, 4H). Step 3: Preparation of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate. [0801] To a solution of N-(6-methoxy-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (480 mg, 1.11 mmol) in DCM (20 mL) and MeOH (5 mL) was added Benzoate (142 mg, 1.16 mmol). The mixture was stirred at 50 oC for 6 h. The mixture was concentrated in vacuo, and triturated with MTBE (10 mL). The precipitate was filtered and washed with MTBE (2 mL) and concentrated in vacuo to give title product (500 mg, yield: 81%) as a white solid. ESI-MS (M+H) +: 434.4.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 8.40 (s, 1H), 8.12 (s, 1H), 7.98 – 7.92 (m, 3H), 7.66 – 7.59 (m, 1H), 7.50 (dd, J = 10.5, 4.7 Hz, 2H), 7.00 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.01 – 3.94 (m, 5H), 3.39 – 3.34 (m, 3H), 3.22 (s, 2H), 3.11 – 3.04 (m, 4H), 0.71 (d, J = 15.5 Hz, 4H). Example 294 – Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000431_0001
Step 1: Preparation of tert-butyl 4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [0802] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) in THF (20 mL) were added TEA (759 mg, 7.50 mmol) and triphosgene (107 mg, 0.36 mmol) (in THF (1 mL )) in 0 ℃. The reaction mixture was stirred at r.t for 1 h. Then 2,6-dimethyl-2H-indazol-5-amine (58 mg, 0.36 mmol) was added to the reaction solution and stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (50 mg, yield: 32 %) as a white solid. ESI-MS (M+H) +:520.3.1H NMR (400 MHz, DMSO- d6) δ 11.72 (s, 1H), 8.28 (s, 1H), 8.17 (s, 1H), 7.82 (d, J = 6.3 Hz, 1H), 7.43 (s, 1H), 6.39 (d, J = 6.4 Hz, 1H), 4.10 (s, 3H), 4.00 – 3.94 (m, 2H), 3.70 (s, 2H), 3.57 (s, 2H), 3.53 (s, 2H), 3.30 – 3.25 (m, 2H), 1.43 (s, 9H), 1.38 (s, 6H). Step 2: Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3,3-dimethylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0803] To a mixture of tert-butyl 4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (40 mg, 0.077 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (28.11 mg, 68%) as a white solid. ESI-MS (M+H) +:420.1.1H NMR (400 MHz, MeOD-d4) δ 8.14 (s, 1H), 7.88 (d, J = 6.1 Hz, 2H), 7.47 (s, 1H), 6.76 (s, 1H), 4.32 – 4.24 (m, 2H), 4.19 (s, 3H), 3.77 – 3.64 (m, 2H), 3.61 – 3.50 (m, 2H), 3.47 – 3.44 (m, 2H), 3.42 – 3.34 (m, 2H), 2.45 (s, 3H), 1.50 (s, 6H).
Example 295 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-5-fluoro-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000433_0001
Step 1: Preparation of tert-butyl (2-(4-chloro-2,5-difluoropyridin-3-yl)ethyl)carbamate. [0804] To a solution of 4-chloro-2,5-difluoropyridine (5.0 g, 33.33 mmol) in THF (50 mL) was added LDA (25 mL, 50.00 mmol) dropwise at -75 ℃. After 1 h, tert-butyl 1,2,3- oxathiazolidine-3-carboxylate 2,2-dioxide (8.17 g, 36.66 mmol) in THF (80 mL) was added dropwise at -75 ℃, the reaction was stirred at rt for 16 h. The mixture was quenched with NH4Cl aq. (200 mL), extracted with EA (100 mL *3), and the organic phase was concentrated, purified by silica gel chromatography (PE: EA=1:1) to give the title compound (4.8 g, 49% yield) as a yellow solid. ESI-MS (M+H) +: 237.0.1H NMR (400 MHz, DMSO- d6) δ 8.30 (s, 1H), 6.95 (t, J = 6.0 Hz, 1H), 3.21 – 3.16 (m, 2H), 2.87 (t, J = 6.4 Hz, 2H), 1.31 (s, 9H). Step 2: Preparation of tert-butyl 4-chloro-5-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate. [0805] To a solution of tert-butyl (2-(4-chloro-2,5-difluoropyridin-3-yl)ethyl)carbamate (2.8 g, 9.59 mmol) in THF (150 mL) was added NaH (60%, 460 mg, 11.51 mmol) at 0 ℃, the reaction was stirred at rt for 16 h. The reaction was concentrated in vacuo, diluted with EA (150 mL), washed with H2O (200 mL), the EA phase was concentrated and purified by silica gel chromatography by (PE: EA = 1:1) to give the title compound (1.1 g, 44% yield) as a white solid. ESI-MS (M+H) +: 217.0.1H NMR (400 MHz, CDCl3) δ 8.12 (s, 1H), 4.09 (t, J = 8.8 Hz, 2H), 3.09 (t, J = 8.8 Hz, 2H), 1.56 (s, 9H). Step 3: Preparation of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-5- fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [0806] A solution of tert-butyl 4-chloro-5-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate (800 mg, 2.94 mmol), benzyl 2,2-dimethylpiperazine-1-carboxylate (1.4 g, 5.88 mmol), Cs2CO3 (1.9 g, 5.88 mmol), xantphos (341 mg, 0.59 mmol), and Pd2(dba)3 (265 mg, 0.29 mmol) in1,4-dioxane (30 mL) was stirred at 110 ℃ under Ar for 16 h. The mixture was diluted with EA (200 mL), washed with H2O (200 mL *2) and brine (100 mL). The EA phase was concentrated in vacuo, purified by silica gel chromatography (PE: EA = 1:1 ~ 0:1) to give the title compound (1.0 g, 71% yield) as a yellow solid. ESI-MS (M+H) +: 485.2.1H NMR (400 MHz, CDCl3) δ 7.93 (d, J = 5.2 Hz, 1H), 7.40 – 7.30 (m, 5H), 5.13 (s, 2H), 4.00 – 3.96 (m, 2H), 3.78 – 3.73 (m, 2H), 3.47 – 3.42 (m, 2H), 3.25 (d, J = 1.2 Hz, 2H), 3.06 (t, J = 8.8 Hz, 2H), 1.54 (s, 9H), 1.47 (s, 6H). Step 4: Preparation of benzyl 4-(5-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate TFA salt. [0807] A solution of tert-butyl 4-(4-((benzyloxy)carbonyl)-3,3-dimethylpiperazin-1-yl)-5- fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (1.0 g, 2.06 mmol) and TFA (3 mL) in DCM (9 mL) was stirred at 30 ℃ for 16 h. The mixture was concentrated in vacuo to give the title compound (750 mg, 94% yield) as a yellow solid. ESI-MS (M+H) +: 385.2. Step 5: Preparation of benzyl 4-(5-fluoro-1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0808] A solution of benzyl 4-(5-fluoro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate TFA salt (50 mg, 0.10 mmol), 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (50 mg, 0.26 mmol) and TEA (1 mL) was stirred at rt, then triphosgene (77 mg, 0.26 mmol) in THF (1 mL) was added to the mixture and stirred at r.t for 16 h. The mixture was concentrated in vacuo, diluted with EA (100 mL), washed with H2O (100 mL) and brine (50 mL), and the EA phase was concentrated in vacuo, purified by silica gel chromatography (DCM: MeOH = 10:1) to give the title compound (20 mg, crude) as a yellow solid. ESI-MS (M+H) +: 576.2. Step 6: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-5-fluoro-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0809] To a solution of benzyl 4-(5-fluoro-1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (10 mg) in DCM (5 ml) was added HBr/AcOH (0.1 mL), and the reaction was stirred at rt for 30 min. The reaction was concentrated in vacuo, and purified by reverse flash (0.1% TFA in H2O / ACN) to give the title compound (1.46 mg, 9% yield) as a yellow solid. ESI-MS (M+H) +: 442.2.1H NMR (400 MHz, CD3OD) δ 9.60 (d, J = 6.4 Hz, 1H), 7.97 (d, J = 4.8 Hz, 1H), 7.91 (s, 1H), 7.78 (d, J = 9.8 Hz, 1H), 4.19 (t, J = 8.8 Hz, 2H), 3.62 – 3.56 (m, 2H), 3.44 – 3.38 (m, 4H), 3.33 – 3.30 (m, 2H), 2.50 (s, 3H), 1.50 (s, 6H). Example 296 – Preparation of (S)-N-(6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000435_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0810] To a solution of 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (100 mg, 0.52 mmol) in Toluene (10 mL) were added TEA (158 mg, 1.56 mmol) and DPPA (378 mg, 1.30 mmol). The mixture was stirred at 20 oC for 1h. Then the mixture was stirred at 60 oC for another 1h. tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (164 mg, 0.52 mmol) was added to the mixture and stirred at 90 oC for 16 h. The precipitate was filtered to provide title product (370 mg, crude) as a white solid. ESI-MS (M+H)+: 509.8.1H NMR (400 MHz, CDCl3) δ 8.36 (d, J = 7.9 Hz, 1H), 8.30 (d, J = 5.6 Hz, 1H), 7.93 (d, J = 6.0 Hz, 1H), 6.36 (d, J = 6.0 Hz, 1H), 6.18 (s, 1H), 4.35 (s, 1H), 4.21 – 4.13 (m, 2H), 3.96 (d, J = 13.8 Hz, 1H), 3.57 – 3.40 (m, 3H), 3.23 (td, J = 13.2, 2.9 Hz, 1H), 3.15 – 3.11 (m, 2H), 2.96 (td, J = 11.9, 3.4 Hz, 1H), 2.43 (s, 3H), 1.49 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0811] To a solution of tert-butyl (S)-4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (350 mg, 0.69 mmol) in DCM (3 mL) was added TFA (3 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% NH3HCO3 in H2O / ACN) to give title compound. The residue was diluted with 0.5 M TFA in water and concentrated in vacuo to give title compound (49 mg, yield: 17%) as a green solid. ESI-MS (M+H)+: 409.8.1H NMR (400 MHz, DMSO-d6) δ 12.30 (s, 1H), 8.99 (s, 1H), 8.93 (d, J = 6.3 Hz, 1H), 8.68 (s, 1H), 8.26 (d, J = 8.0 Hz, 1H), 7.95 (d, J = 6.1 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 6.31 (s, 1H), 4.05 – 4.02 (m, 2H), 3.81 (d, J = 13.0 Hz, 2H), 3.38 (d, J = 9.3 Hz, 2H), 3.23 – 3.11 (m, 4H), 3.02 – 2.94 (m, 1H), 2.33 (s, 3H), 1.26 (d, J = 6.5 Hz, 3H). Example 297 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000436_0001
Step 1: Preparation of tert-butyl 4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0812] To a solution of 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (100 mg, 0.52 mmol) in Toluene (10 mL) were added TEA (158 mg, 1.56 mmol) and DPPA (378 mg, 1.30 mmol). The mixture was stirred at 20 oC for 1h. Then the mixture was stirred at 60 oC for another 1h. Tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (165 mg, 0.52 mmol) was added to the mixture. The reaction mixture was stirred at 90 oC for 16 h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:3) to provide title product (300 mg, crude) as a white solid. ESI- MS (M+H)+: 524.1.1H NMR (400 MHz, DMSO-d6) δ 12.52 (s, 1H), 8.91 (d, J = 6.5 Hz, 1H), 8.27 (d, J = 8.2 Hz, 1H), 7.82 (d, J = 6.0 Hz, 1H), 6.43 (d, J = 6.3 Hz, 1H), 6.31 (s, 1H), 4.00 – 3.94 (m, 2H), 3.73 – 3.68 (m, 2H), 3.60 – 3.56 (m, 2H), 3.55 (s, 2H), 3.32 – 3.29 (m, 2H), 2.33 (s, 3H), 1.44 (s, 9H), 1.38 (s, 6H). Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2-methylpyrazolo[1,5- a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0813] To a solution of tert-butyl 4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (280 mg, 0.54 mmol) in DCM (3 mL) was added TFA (3 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep- HPLC (0.05% TFA in H2O / ACN) to give title compound (49 mg, yield: 17%) as a white solid. ESI-MS (M+H)+: 423.9.1H NMR (400 MHz, DMSO-d6) δ 12.29 (d, J = 2.2 Hz, 1H), 9.05 – 8.85 (m, 3H), 8.26 (d, J = 8.0 Hz, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 6.31 (s, 1H), 4.03 (t, J = 8.5 Hz, 2H), 3.47 (s, 2H), 3.31 – 3.30 (m, 4H), 3.18 (t, J = 8.4 Hz, 2H), 2.33 (s, 3H), 1.37 (s, 6H).
Example 298 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide benzoate.
Figure imgf000438_0001
Step 1: Preparation of phenyl (2-methylimidazo[1,2-a]pyridin-6-yl)carbamate. [0814] To a mixture of 2-methylimidazo[1,2-a]pyridin-6-amine (19 g, 129.25 mmol) and pyridine (30.63 g, 387.75 mmol) in DCM (500 mL) was added phenyl carbonochloridate (30.36 g, 193.88 mmol) at 0 oC, the mixture was stirred for 30 min. The mixture was diluted with water (500 mL), extracted with DCM (500 mL×3). The organic layer was washed with brine (500 mL), dried with Na2SO4 and concentrated in vacuo to give title product (30 g, yield: 86.93 %) as a yellow solid. ESI-MS (M+H) +: 268.1.1H NMR (400 MHz, CDCl3) δ 8.74 (s, 1H), 7.47 – 7.39 (m, 4H), 7.31 (s, 1H), 7.26 – 7.23 (m, 1H), 7.19 (d, J = 8.1 Hz, 2H), 6.91 (d, J = 9.0 Hz, 1H), 2.44 (s, 3H). Step 2: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0815] A mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (20 g, 60.24 mol), phenyl (2-methylimidazo[1,2-a]pyridin- 6-yl)carbamate (24.1 g, 90.36 mmol), and TEA (18.25 g, 180.72 mmol) in THF (200 mL) was stirred at 70 oC for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered and diluted with MeOH, stirred at RT for 1 h. The precipitate was filtered and dried to afford title product (25 g, yield: 82.18 %) as a yellow solid. ESI-MS (M+H) +: 506.3.1H NMR (400 MHz, CDCl3) δ 11.70 (s, 1H), 8.97 (d, J = 1.4 Hz, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.44 (d, J = 9.5 Hz, 1H), 7.30 (s, 1H), 7.02 (dd, J = 9.5, 2.0 Hz, 1H), 6.40 (d, J = 6.1 Hz, 1H), 4.30 – 4.23 (m, 2H), 4.20 – 4.13 (m, 2H), 3.45 (d, J = 12.2 Hz, 2H), 3.15 (t, J = 8.6 Hz, 2H), 3.02 (dd, J = 12.1, 4.3 Hz, 2H), 2.45 (s, 3H), 1.50 (s, 9H), 1.37 (d, J = 6.8 Hz, 6H). Step 3: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0816] A mixture of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (25 g, 49.50 mmol) in 4M HCl /EA (200 mL) was stirred at RT for 2 h. The precipitate was filtered and diluted with water (50 mL), adjusted pH to 8~9 by 1N Na2CO3. The precipitate was filtered, washed with water (100 mL*3) and dried in vacuo to give title product (19 g, yield: 94.77 %) as a yellow solid. ESI-MS (M+H) +: 406.2.1H NMR (400 MHz, DMSO-d6) δ 11.76 (s, 1H), 8.94 (d, J = 1.3 Hz, 1H), 7.89 (d, J = 6.1 Hz, 1H), 7.69 (s, 1H), 7.40 (d, J = 9.5 Hz, 1H), 7.14 (dd, J = 9.5, 2.0 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 3.97 (t, J = 8.6 Hz, 2H), 3.62 (d, J = 11.8 Hz, 2H), 3.13 (t, J = 8.6 Hz, 2H), 2.85 (s, 2H), 2.43 (t, J = 11.0 Hz, 2H), 2.30 (s, 3H), 1.02 (d, J = 6.2 Hz, 6H). Step 4: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate. [0817] A mixture of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (19 g, 46.91 mmol) and benzoic acid (6.009 g, 49.26 mmol) in MeOH (200 mL) was stirred at 50 oC for 16 h. The mixture was concentrated in vacuo. The mixture was diluted with MTBE, stirred at r.t for 1 h. The precipitate was filtered and dried to afford title product (21.3 g, yield: 86.2 %) as a yellow solid ESI-MS (M+H) +: 406.2.1H NMR (400 MHz, DMSO-d6) δ 11.75 (s, 1H), 8.94 (d, J = 1.3 Hz, 1H), 7.94 (dd, J = 5.1, 3.3 Hz, 2H), 7.89 (d, J = 6.1 Hz, 1H), 7.69 (s, 1H), 7.63 – 7.53 (m, 1H), 7.47 (dd, J = 10.5, 4.6 Hz, 2H), 7.40 (d, J = 9.5 Hz, 1H), 7.13 (dd, J = 9.5, 2.0 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 3.97 (t, J = 8.6 Hz, 2H), 3.63 (d, J = 11.1 Hz, 2H), 3.12 (t, J = 8.5 Hz, 2H), 2.97 – 2.78 (m, 2H), 2.46 – 2.43 (m, 2H), 2.31 (s, 3H), 1.05 (d, J = 6.3 Hz, 6H). Example 299 – Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000440_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate. [0818] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) in THF (10 mL) were added TEA (759 mg, 7.50 mmol) and triphosgene (107 mg, 0.36 mmol) (in THF (1 mL )) in 0 ℃. The reaction mixture was stirred at r.t for 1 h. Then 2,6-dimethyl-2H-indazol-5-amine (58 mg, 0.36 mmol) was added to the reaction solution and stirred at r.t for16 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (50 mg, yield: 32 %) as a white solid. ESI-MS (M+H) +:519.8.1H NMR (400 MHz, DMSO- d6) δ 11.57 (s, 1H), 8.27 (s, 1H), 8.18 (s, 1H), 7.94 (d, J = 6.2 Hz, 1H), 7.44 (s, 1H), 6.55 (d, J = 5.9 Hz, 1H), 4.10 – 4.08 (m, 5H), 4.01 (t, J = 4.3 Hz, 2H), 3.58 (d, J = 12.4 Hz, 2H), 3.18 (t, J = 8.9 Hz, 2H), 2.99 (d, J = 8.4 Hz, 2H), 2.44 (s, 3H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-((3R,5S)-3,5-dimethylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0819] To a mixture of tert-butyl (2R,6S)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (40 mg, 0.077 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep- HPLC (0.1% TFA in H2O / ACN) to give title product (22.82 mg, 55%) as a white solid. ESI- MS (M+H) +:419.9.1H NMR (400 MHz, MeOD-d4) δ 8.15 (s, 1H), 7.86 (d, J = 6.3 Hz, 2H), 7.47 (s, 1H), 6.79 (s, 1H), 4.27 (d, J = 8.2 Hz, 2H), 4.19 (s, 3H), 4.10 (s, 2H), 3.57 – 3.51 (m, 2H), 3.39 (s, 2H), 3.08 (s, 2H), 2.44 (s, 3H), 1.41 (d, J = 6.6 Hz, 6H). Example 300 – Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000441_0001
Step 1: Preparation of tert-butyl 7-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0820] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol), 2,6-dimethyl-2H-indazol-5-amine (149.9 mg, 0.91 mmol), triphosgene (270 mg, 0.91 mmol) and TEA (616.1 mg, 6.1 mmol) in THF (40 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 100 %) to give title product (60 mg, crude) as a yellow solid. ESI- MS (M+H) +: 517.8. [0821] Step 2 Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0822] A mixture of tert-butyl 7-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (40 mg, 0.08 mmol) in TFA / DCM (2 mL / 2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (3.42 mg, yield: 6.7 %) as a yellow solid. ESI-MS (M+H) +: 417.9.1H NMR (400 MHz, MeOD-d4) δ 8.15 (s, 1H), 7.86 (d, J = 5.7 Hz, 2H), 7.47 (s, 1H), 6.74 (s, 1H), 4.30 – 4.24 (m, 2H), 4.19 (s, 3H), 3.84 (s, 2H), 3.70 – 3.63 (m, 2H), 3.55 – 3.52 (m, 2H), 3.40 – 3.35 (m, 2H), 2.45 (s, 3H), 1.19 – 1.15 (m, 2H), 1.12 – 1.09 (m, 2H). Example 301 – Preparation of 4-(3-(aminomethyl)azetidin-1-yl)-N-(7-fluoro-2-methyl- 2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000442_0001
Step 1: Preparation of tert-butyl ((1-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)azetidin-3-yl)methyl)carbamate. [0823] To a solution of 1-(4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl)ethan-1-one (500 mg, 2.08 mmol) and tert-butyl (azetidin-3-ylmethyl)carbamate (774 mg, 4.16 mmol) in 1,4- dioxane (10 mL) were added BINAP (260 mg, 0.42 mmol),Cs2CO3(2028 mg, 6.24 mmol) and Pd(OAc)2( 47 mg, 0.21 mmol). The reaction mixture was stirred at 100oC for 16 h. The mixture was concentrated in vacuo and diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (700 mg, crude) as a yellow oil. ESI-MS (M+H) +: 347.3. Step 2: Preparation of tert-butyl ((1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3- yl)methyl)carbamate. [0824] To a solution of tert-butyl ((1-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)azetidin-3-yl)methyl)carbamate (500mg, 1.44 mmol) in MeOH / H2O (10 mL, 5:1) was added K2CO3 (994 mg, 7.20 mmol). The reaction mixture was stirred at 60oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 0: 1, DCM: MeOH= 10: 1) to give title product (479 mg, 79%) as a yellow solid. ESI-MS (M+H) +: 305.1.1H NMR (400 MHz, DMSO-d6) δ 7.42 (d, J = 5.8 Hz, 1H), 5.58 (d, J = 5.9 Hz, 1H), 3.97 – 3.93 (m, 2H), 3.65 – 3.61 (m, 2H), 3.23 – 3.13 (m, 4H), 2.93 – 2.88 (m, 2H), 2.71 – 2.65 (m, 1H), 1.38 (s, 9H). Step 3: Preparation of tert-butyl ((1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)methyl)carbamate. [0825] To a solution of tert-butyl ((1-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3- yl)methyl)carbamate (150 mg, 0.49 mmol) and phenyl (7-fluoro-2-methyl-2H-indazol-5- yl)carbamate (211 mg, 0.73 mmol) in THF (5 mL) was added TFA (0.5 mL). The reaction mixture was stirred at 70oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 0: 1) to give title product (193 mg, 79%) as a yellow solid. ESI- MS (M+H) +: 496.3. Step 4: Preparation of 4-(3-(aminomethyl)azetidin-1-yl)-N-(7-fluoro-2-methyl-2H-indazol-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0826] To a solution of tert-butyl ((1-(1-((7-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)azetidin-3-yl)methyl)carbamate (180 mg, 0.36 mmol) in EA (2 mL) was added 4M HCl / EA (5 mL). The reaction mixture was stirred at RT for 2 h. The precipitate was filtrated and dried in vacuo to give title product (93 mg, crude) as a white solid. The compound (50 mg) was purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (16.92 mg, yield: 27 %) as a yellow solid. ESI-MS (M+H) +: 396.1.1H NMR (400 MHz, MeOD-d4) δ 8.23 (d, J = 2.6 Hz, 1H), 7.70 (d, J = 1.3 Hz, 1H), 7.57 (d, J = 7.1 Hz, 1H), 7.25 (dd, J = 13.0, 1.1 Hz, 1H), 6.10 (d, J = 7.1 Hz, 1H), 4.60 – 4.34 (m, 2H), 4.24 – 4.19 (m, 5H), 3.37 – 3.32 (m, 2H), 3.32 – 3.28 (m, 2H), 3.26 – 3.19 (m, 2H), 3.17 – 3.08 (m, 1H).
Example 302 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-3- methyl-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000444_0001
Step 1: Preparation of 4-chloro-3-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [0827] To a solution of 4-chloro-3-methyl-3H-pyrrolo[2,3-b]pyridine (1 g, 6.0 mmol) and Raney-Ni (500 mg, 50 %) in MeOH (20 mL) was stirred at 60 oC for 16 h under H2. The mixture was filtered and the filtrate concentrated in vacuo to give title product (120 mg, 11.9%) as a white solid. ESI-MS (M+H) +: 169.1. Step 2: Preparation of tert-butyl 4-(3-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [0828] To a solution of 4-chloro-3-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (200 mg, 1.18 mmol) and tert-butyl piperazine-1-carboxylate (442 mg, 2.37 mmol) in DIEA (0.5 mL) was stirred at 140 oC for 16 h in a sealed tube. The mixture was concentrated in vacuo and diluted with water (5 mL), extracted with EA (5 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column (PE: EA = 0: 1) to give title product (206 mg, 54%) as a yellow oil. ESI-MS (M+H) +: 319.1. [0829] 1H NMR (400 MHz, DMSO-d6) δ 7.57 (d, J = 5.9 Hz, 1H), 6.09 (d, J = 5.9 Hz, 1H), 5.97 (s, 1H), 3.63 – 3.56 (m, 2H), 3.50 – 3.39 (m, 4H), 3.20 – 3.13 (m, 2H), 3.01 – 2.95 (m, 1H), 2.94 – 2.85 (m, 2H), 1.42 (s, 9H), 1.17 (d, J = 6.6 Hz, 3H). Step 3: Preparation of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-3-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [0830] To a solution of tert-butyl 4-(3-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (100 mg, 0.31 mmol) and 8-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (78 mg, 0.47 mmol) in in THF (5 mL) were added TEA (0.5 mL) and triphosgene (140 mg, 0.47 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (80 mg, crude) as a green solid. ESI-MS (M+H) +: 510.2.1H NMR (400 MHz, DMSO-d6) δ 11.86 (s, 1H), 8.88 (d, J = 1.6 Hz, 1H), 8.03 (d, J = 6.0 Hz, 1H), 7.89 (d, J = 2.5 Hz, 1H), 7.31 (dd, J = 12.5, 1.6 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.20 – 4.12 (m, 1H), 3.77 – 3.65 (m, 2H), 3.61 – 3.53 (m, 2H), 3.52 – 3.41 (m, 4H), 3.20 – 3.12 (m, 2H), 2.39 (s, 3H), 1.49 (s, 9H), 1.27 (d, J = 6.7 Hz, 3H). Step 4: Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-3-methyl-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0831] To a solution of tert-butyl 4-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-3-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.14 mmol) in EA (1 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (86.63 mg, yield: 99 %) as a yellow solid. ESI-MS (M+H) +: 410.1.1H NMR (400 MHz, DMSO-d6) δ 12.05 (s, 1H), 9.15 (s, 1H), 8.88 (s, 2H), 8.14 (s, 1H), 8.02 (d, J = 6.1 Hz, 1H), 7.85 (s, 1H), 6.70 (d, J = 6.2 Hz, 1H), 4.17 – 4.11 (m, 1H), 3.72 – 3.64 (m, 2H), 3.60 – 3.52 (m, 2H), 3.38 – 3.31 (m, 2H), 3.30 – 3.16 (m, 4H), 2.44 (s, 3H), 1.22 (d, J = 6.6 Hz, 3H).
Example 303 – Preparation of 4-(2,2-dimethylpiperidin-4-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000446_0001
Step 1: Preparation of tert-butyl 6,6-dimethyl-4-(((trifluoromethyl)sulfonyl)oxy)-3,6- dihydropyridine-1(2H)-carboxylate. [0832] To a solution of tert-butyl 2,2-dimethyl-4-oxopiperidine-1-carboxylate (3 g, 13.22 mmol) in dry THF (30 mL) was added LiHMDS (15.87 mL, 15.87 mmol, 1.0 M) dropwise at - 70 oC. The mixture was stirred at this temperature for 30 min.1,1,1-trifluoro-N-phenyl-N- ((trifluoromethyl)sulfonyl)methanesulfonamide (6.15 g, 17.19 mmol) in dry THF (20 mL) was added to the mixture and stirred at RT for 24 h. The mixture was diluted with aq. NH4Cl (30 mL) and extracted with EtOAc (50 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA/PE=1:100) to give title product (3 g, 63.24 %) as a yellow oil. ESI-MS (M+H-Boc+ACN) +: 301.2.1H NMR (400 MHz, CDCl3-d) δ 5.82 – 5.69 (m, 1H), 4.11 – 4.02 (m, 2H), 2.45 – 2.34 (m, 2H), 1.49 (s, 6H), 1.46 (s, 9H). Step 2: Preparation of tert-butyl 6,6-dimethyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2- yl)-3,6-dihydropyridine-1(2H)-carboxylate. [0833] To a solution of tert-butyl 6,6-dimethyl-4-(((trifluoromethyl)sulfonyl)oxy)-3,6- dihydropyridine-1(2H)-carboxylate (3 g, 8.34 mmol) in 1,4-dioxane (30 mL) were added B2pin2 (5.3 g, 20.88 mmol), Pd(dppf)Cl2 (677 mg, 0.83 mmol) and KOAc (2.9 g, 29.22 mmol). The mixture was charged with N2 for three times and stirred at 100 oC for 2 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (30 mLx3).The organic layer was washed with bine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA/PE=1:10) to give title product (1.2 g, 42.61 %) as a yellow oil. ESI-MS (M+H) +:338.2. Step 3: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6,6-dimethyl- 3,6-dihydropyridine-1(2H)-carboxylate. [0834] To a solution of tert-butyl 6,6-dimethyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2- yl)-3,6-dihydropyridine-1(2H)-carboxylate (1.2 g, 3.56 mmol) in 1,4-dioxane (20 mL) and H2O (4 mL) were added 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (708 mg, 3.56 mmol), K2CO3 (1.5 g, 10.68 mmol) and Pd(dppf)Cl2 (294 mg, 0.36 mmol). The mixture was charged with N2 for three times and stirred at 90 oC for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (20 mLx3). The organic layer was washed with brine, dried over Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA/PE=1:3) to give title product (400 mg, 34.19 %) as a yellow solid. ESI-MS (M+H) +: 330.2. Step 4: Preparation of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperidine-1-carboxylate. [0835] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6,6- dimethyl-3,6-dihydropyridine-1(2H)-carboxylate (350 mg, 1.06 mmol) in MeOH (10 mL) was added Pd(OH)2 (70 mg). The mixture was charged with H2 for three times and stirred at 50 °C for 16 h. The mixture was filtered and concentrated in vacuo to give title product (250 mg, 71.02 %) as a yellow solid. ESI-MS (M+H) +: 332.3. Step 5: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperidine-1- carboxylate. [0836] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperidine-1-carboxylate (250 mg, 0.75 mmol) and 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (124 mg, 0.75 mmol) in THF (5 mL), were added TEA (379 mg, 3.75 mmol) and triphosgene (223 mg, 0.75 mmol) at 0 °C. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by (PE/EA=1/3) to give title product (120 mg, 30.46 %) as a yellow solid. ESI-MS (M+H) +: 523.3. Step 6: Preparation of 4-(2,2-dimethylpiperidin-4-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0837] To a solution of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperidine-1- carboxylate (120 mg, 0.23 mmol) in DCM (2 mL) was added TFA (2 mL). The mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep- HPLC (0.03 % TFA in water / CH3CN) to give title product (24 mg, 24.74 %) as a yellow solid. ESI-MS (M+H) +: 423.1.1H NMR (400 MHz, DMSO-d6) δ 12.08 (d, J = 2.4 Hz, 1H), 9.69 (d, J = 6.6 Hz, 1H), 8.87 – 8.75 (m, 1H), 8.66 – 8.51 (m, 1H), 8.16 (d, J = 4.8 Hz, 2H), 8.10 (d, J = 10.1 Hz, 1H), 6.92 (d, J = 5.6 Hz, 1H), 4.16 – 4.10 (m, 2H), 3.33 – 3.24 (m, 2H), 3.23 – 3.18 (m, 2H), 3.16 – 3.07 (m, 1H), 2.45 (s, 3H), 1.91 – 1.69 (m, 4H), 1.45 – 1.33 (m, 6H). Example 304 – Preparation of (S)-4-(4-cyclopropyl-3-methylpiperazin-1-yl)-N-(7-fluoro- 2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000448_0001
Step 1: Preparation of(S)-4-(4-cyclopropyl-3-methylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0838] To a solution of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (60 mg, 0.15 mmol) and (1-ethoxycyclopropoxy) trimethylsilane (51 mg, 0.29 mmol) in MeOH / THF (2 mL, 1:1) was added TEA (26 mg, 0.75 mmol) at RT for 1 h. Then NaBH3CN (25 mg, 0.39 mmol) was added to the mixture and stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (20.71 mg, yield: 29 %) as a white solid. ESI-MS (M+H) +:450.1.1H NMR (400 MHz, MeOD-d4) δ 9.55 (d, J = 6.4 Hz, 1H), 7.96 – 7.88 (m, 2H), 7.81 (d, J = 9.6 Hz, 1H), 6.64 (d, J = 6.1 Hz, 1H), 4.18 – 4.09 (m, 2H), 3.99 – 3.79 (m, 2H), 3.77 – 3.68 (m, 2H), 3.53 – 3.40 (m, 2H), 3.27 – 3.22 (m, 3H), 2.94 – 2.83 (m, 1H), 2.51 (s, 3H), 1.59 (d, J = 6.6 Hz, 3H), 1.26 – 1.09 (m, 2H), 1.08 – 0.94 (m, 2H). Example 305 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt.
Figure imgf000449_0001
Step 1: Preparation of 6-bromo-2,7-dimethylimidazo[1,2-a]pyrimidine. [0839] To a solution of 5-bromo-4-methylpyrimidin-2-amine (15 g, 79.77 mmol) in IPA (500 mL) and DMF (100 mL) was added 1-chloropropan-2-one (74 g, 797.74 mmol) and the mixture was stirred at 100 °C for 16 h. The mixture was concentrated to dryness and purified by column flash chromatography (DCM/MeOH = 20/1) to afford the product (5.0 g, 27.8% yield) as a yellow solid. ESI-MS (M+H) +: 226.0.1H NMR (400 MHz, DMSO-d6) δ 9.22 (s, 1H), 7.54 (s, 1H), 2.60 (s, 3H), 2.34 (s, 3H). Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-1,1- diphenylmethanimine. [0840] To a solution of 6-bromo-2,7-dimethylimidazo[1,2-a]pyrimidine (1.1 g, 4.87 mmol) in 1,4-dioxane (30 mL) were added diphenylmethanimine (1.1 g, 6.32 mmol), Pd(OAc)2 (109 mg, 0.49 mmol), Cs2CO3 (3.2 mg, 9.74 mmol) and BINAP (606 mg, 0.97 mmol) and the reaction was stirred at 115 °C for 16 h. The mixture was concentrated to dryness and purified by column flash chromatography (DCM/MeOH = 10/1) to afford the product (520 mg, 32.5% yield) as a yellow solid. ESI-MS (M+H)+: 327.2. Step 3: Preparation of 2,7-dimethylimidazo[1,2-a]pyrimidin-6-amine. [0841] To a solution of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-1,1- diphenylmethanimine (2.6 g, 7.97 mmol) in EA (15 mL) was added HCl/1,4-Dioxane (20 mL) and the reaction was stirred at rt for 16 h. The mixture was concentrated to dryness and purified by prep-HPLC (0.1% NH3.H2O in H2O / CH3CN) to afford the product (250 mg, 19.2% yield). ESI-MS (M+H) +: 162.9. Step 4: Preparation of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0842] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) and 2,7-dimethylimidazo[1,2- a]pyrimidin-6-amine (49 mg, 0.60 mmol) in THF (15 mL) was added TEA (151.5 mg, 1.50 mmol) at 0 °C, then TBC (267 mg, 0.90 mmol) was added at 0 °C and the mixture was stirred at rt for 16 h. The mixture was poured into water (30 mL), extracted with EA (20 mL × 3) and the combined organic was washed with brine (50 mL) and dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by column flash chromatography (DCM/MeOH = 20/1) to afford the product (44 mg, 28% yield) as a yellow solid. ESI-MS (M+H) +: 521.3. Step 5: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt. [0843] To a solution of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (30 mg, 0.06 mmol) in DCM (4 mL) was added TFA (4 mL) and the reaction was stirred at 30 °C for 1 h. The mixture was concentrated to dryness purified by Prep-HPLC (0.05% TFA in H2O / ACN) to afford the product (11.39 mg, 47.4% yield) as a grey solid. ESI-MS (M+H) +: 421.3.1H NMR (400 MHz, D2O) δ 9.24 (s, 1H), 7.77 (d, J = 6.0 Hz, 1H), 7.44 (s, 1H), 6.45 (s, 1H), 3.88 – 3.87 (m, 2H), 3.45 (s, 2H), 3.30 (d, J = 24.7 Hz, 4H), 3.01 – 2.99 (m, 2H), 2.56 (s, 3H), 2.30 (s, 3H), 1.38 (s, 6H). [0844] Example 306 – Preparation of (S)-N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000451_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0845] To a mixture of 6-ethoxy-2-methyl-2H-indazole-5-carboxylic acid (125 mg, 0.57 mmol) in toluene (5 mL) were added DPPA (291 mg, 1.06 mmol) and TEA (152 mg, 1.51 mmol). The mixture was stirred at r.t for 1 h and warmed up to 90oC and stirred for 1 h. The mixture was added tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.38 mmol) and stirred at 110oC for 4 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3), the organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 2) to get title product (60 mg, Y: 29.7%) as a white solid. ESI-MS (M+H)+:536.3.1H NMR (400 MHz, DMSO-d6) δ 12.07 (s, 1H), 8.50 (s, 1H), 8.17 (s, 1H), 7.94 (d, J = 5.8 Hz, 1H), 7.03 (s, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.28 (t, J = 6.6 Hz, 1H), 4.21 – 4.18 (m, 2H), 4.11 (s, 3H), 4.06 (t, J = 8.6 Hz, 2H), 3.87 – 3.82 (m, 1H), 3.68 – 3.59 (m, 2H), 3.24 – 3.17 (m, 3H), 3.12 – 3.08 (m, 1H), 3.00 – 2.95 (m, 1H), 1.58 (t, J = 6.9 Hz, 3H), 1.49 (s, 9H), 1.25 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0846] To a solution of tert-butyl (S)-4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.09 mmol) in DCM (2 mL) was added TFA (1 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.03% TFA in water / ACN) to give title product (43.5 mg, Y: 84.8%) as a yellow solid. ESI-MS (M+H)+:436.2.1H NMR (400 MHz, DMSO-d6) δ 11.95 (s, 1H), 8.86 – 8.67 (m, 2H), 8.43 (s, 1H), 8.12 (s, 1H), 7.91 (d, J = 6.0 Hz, 1H), 6.99 (s, 1H), 6.62 (d, J = 6.1 Hz, 1H), 4.14 (q, J = 6.9 Hz, 2H), 4.06 (s, 3H), 4.05 – 4.00 (m, 2H), 3.80 – 3.74 (m, 2H), 3.42 – 3.34 (m, 2H), 3.19 – 3.11 (m, 4H), 3.00 – 2.93 (m, 1H), 1.52 (t, J = 6.9 Hz, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 307 – Preparation of (S)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate.
Figure imgf000452_0001
Step 1: Preparation of 5-bromo-2,6-dimethyl-2H-indazole. [0847] To a solution of 6- 5-bromo-6-methyl-1H-indazole (10 g, 47.39 mmol) in EA (200 mL) was added Trimethyloxonium Tetrafluoroborate (8.4 g, 56.87 mmol) at 0℃. The mixture was stirred at r.t for 5 h. The precipitate was filtered, washed with EA (100 mL) and dried in vacuo to give title product (14 g, crude) as a yellow solid. ESI-MS (M+H) +:227.2.1H NMR (400 MHz, DMSO-d6) δ 8.27 (s, 1H), 8.00 (s, 1H), 7.58 (s, 1H), 4.14 (s, 3H), 2.42 (s, 3H). Step 2: Preparation of N-(2,6-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine. [0848] To a solution of 5-bromo-2,6-dimethyl-2H-indazole (11 g, 49.11 mmol) in 1,4- dioxane (200 mL) were added diphenylmethanimine (11 g, 58.03 mmol), Pd(OAc)2 (1.1 g, 4.91 mmol), BINAP (6.1 g, 9.82 mmol), Cs2CO3 (32 g, 98.22 mmol). The mixture was stirred at 115 ℃ for 5 h. The reaction mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (11 g, yield: 69 %) as a yellow solid. ESI- MS (M+H) +:326.2.1H NMR (400 MHz, CDCl3) δ 7.81 – 7.78 (m, 2H), 7.53 (s, 1H), 7.46 (d, J = 7.0 Hz, 1H), 7.43 – 7.40 (m, 3H), 7.23 – 7.20 (m, 3H), 7.11 (dd, J = 6.6, 2.9 Hz, 2H), 6.48 (s, 1H), 4.07 (s, 3H), 2.34 (s, 3H). Step 3: Preparation of 2,6-dimethyl-2H-indazol-5-amine. [0849] To a solution of N-(2,6-dimethyl-2H-indazol-5-yl)-1,1-diphenylmethanimine (10.5 g, 32.21 mmol) in EA (50 mL) was added 4M HCl/EA (50 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered, washed with EA (100 mL) and dried in vacuo to give title product (HCl salt) (5.5 g, 86%) as a white solid. To a solution 2,6-dimethyl-2H-indazol- 5-amine hydrochloride (3 g, 15.15 mmol) in H2O (20 mL) was added NaHCO3 to pH=9. The precipitate was filtered, washed with H2O (5 mL) and dried in vacuo to give title product (2.2 g, 89%) as a yellow solid. ESI-MS (M+H) +: 162.2.1H NMR (400 MHz, CDCl3) δ 7.58 (s, 1H), 7.41 (s, 1H), 6.77 (s, 1H), 4.12 (s, 3H), 3.56 (s, 2H), 2.31 (s, 3H). Step 4: Preparation of tert-butyl (S)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0850] To a mixture of 2,6-dimethyl-2H-indazol-5-amine (733 mg, 4.53 mmol), TEA (3.82 g, 37.70 mmol) in THF (50 mL) were added triphosgene (1.3 g, 4.53 mmol) and stirred at 0℃ for 5 min, then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (1.2 g, 3.77 mmol) was added slowly at 0℃. The reaction mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (100 mL) and stirred at r.t for 20 min. The precipitate was filtered, washed with water (20 mL) and dried to give title product (1.7 g, yield: 82 %) as a white solid. ESI-MS (M+H) +:506.0.1H NMR (400 MHz, CDCl3) δ 11.56 (s, 1H), 8.39 (s, 1H), 7.90 (d, J = 6.0 Hz, 1H), 7.77 (s, 1H), 7.48 (s, 1H), 6.34 (d, J = 6.0 Hz, 1H), 4.34 – 4.33 (m, 1H), 4.23 – 4.16 (m, 5H), 3.97 (d, J = 13.4 Hz, 1H), 3.52 (d, J = 12.4 Hz, 1H), 3.43 (d, J = 12.4 Hz, 1H), 3.23 – 3.21 (m, 1H), 3.14 – 3.04 (m, 3H), 2.95 – 2.94 (m, 1H), 2.52 (s, 3H), 1.49 (s, 9H), 1.31 (d, J = 6.7 Hz, 3H). Step 5: Preparation of (S)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0851] To a mixture of tert-butyl (S)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (1.7 g, 3.36 mmol) in EA (20 mL) was added 4M HCl/EA (20 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo. The residue was diluted with H2O (10 mL), adjusted pH=9 with sodium carbonate solution and stirred at r.t for 2 h. The mixture was filtered through a Celite pad and collect solid to give title product (1 g, 73 %) as a white solid. The crude product (S)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridine-1-carboxamide (200 mg, 0.49 mmol) was purified by prep-HPLC (0.1% NH3.H2O in EtOH / Hexane) to give title product (117.69 mg, 59%) as a white solid. ESI-MS (M+H) +:406.2.1H NMR (400 Hz, DMSO-d6) δ 11.63 (s, 1H), 8.28 (s, 1H), 8.17 (s, 1H), 7.87 (d, J = 6.1 Hz, 1H), 7.43 (s, 1H), 6.49 (d, J = 6.1 Hz, 1H), 4.10 (s, 3H), 3.98 (t, J = 8.6 Hz, 2H), 3.57 (d, J = 11.4 Hz, 2H), 3.12 (t, J = 8.5 Hz, 2H), 2.91 (d, J = 10.4 Hz, 1H), 2.83 – 2.72 (m, 3H), 2.43 (d, J = 6.6 Hz, 4H), 1.00 (d, J = 6.3 Hz, 3H). Step 6: Preparation of (S)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate. [0852] To a mixture of (S)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (800 mg, 1.97 mmol) in DCM (20 mL) and MeOH (2 mL) was added benzoate (240 mg, 1.97 mmol). The mixture was stirred at 50℃ for 2 h. The mixture was concentrated under reduced pressure, triturated with MTBE and lyophilized to give title product (957 mg, 92%) as a white solid. ESI-MS (M+H) +:406.3. 1H NMR (400 MHz, MeOD-d4) δ 8.21 (s, 1H), 8.05 (s, 1H), 7.98 – 7.93 (m, 3H), 7.47 (d, J = 7.3 Hz, 1H), 7.43 – 7.37 (m, 3H), 6.58 – 6.51 (m, 1H), 4.16 (s, 3H), 4.12 – 4.06 (m, 2H), 3.72 (d, J = 13.7 Hz, 2H), 3.32 (d, J = 6.8 Hz, 1H), 3.29 – 3.25 (m, 1H), 3.19 – 3.07 (m, 4H), 2.86 – 2.78 (m, 1H), 2.48 (s, 3H), 1.30 (d, J = 6.5 Hz, 3H). Example 308 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000455_0001
[0853] Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. A mixture of 6-methoxy-2-methylpyrazolo[1,5- a]pyridine-5-carboxylic acid (100 mg, 0.48 mmol), TEA (146 mg, 1.45 mmol) and DPPA (267 mg, 0.97 mmol) in Tol (3 mL) was stirred at RT for 1 h, then stirred at 70 oC for 1h, tert- butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (161 mg, 0.48 mmol) was added. The mixture was stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 5) to give title product (180 mg, Y: 69.5%) as a white solid. ESI-MS (M+H) +: 536.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0854] A mixture of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (160 mg, 0.30 mmol) in DCM (4 mL) and TFA (2 mL) was stirred at RT for 1 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (25.78 mg, Y: 19.8 %) as a white solid. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.26 (d, J = 8.4 Hz, 1H), 8.63 (d, J = 9.9 Hz, 1H), 8.30 (s, 1H), 8.24 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.05 – 3.99 (m, 2H), 3.97 (s, 3H), 3.89 – 3.86 (m, 2H), 3.46 – 3.32 (m, 2H), 3.24 – 3.14 (m, 2H), 2.96 – 2.83 (m, 2H), 2.31 (s, 3H), 1.27 (d, J = 6.5 Hz, 6H). Example 309 – Preparation of (S)-N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000456_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0855] A mixture of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (100 mg, 0.48 mmol), TEA (146 mg, 1.45 mmol) and DPPA (267 mg, 0.97 mmol) in Tol (3 mL) was stirred at RT for 1 h, then stirred at 70 oC for 1h. tert-butyl (S)-4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (154 mg, 0.48 mmol) was added to the mixture and stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 4) to give title product (120 mg, Y: 47.6%) as a white solid. ESI-MS (M+H) +: 522.4. Step 2: Preparation of (S)-N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0856] A mixture of tert-butyl (S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.1 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (44.14 mg, Y: 85.97%) as a white solid. ESI-MS (M+H) +: 422.1.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 9.15 (s, 1H), 8.81 (s, 1H), 8.30 (s, 1H), 8.23 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.02 (t, J = 8.7 Hz, 2H), 3.96 (s, 3H), 3.80 (s, 2H), 3.44 – 3.32 (m, 2H), 3.24 – 3.08 (m, 4H), 3.04 – 2.92 (m, 1H), 2.31 (s, 3H), 1.28 (d, J = 6.5 Hz, 3H). Example 310 – Preparation of (R)-N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000457_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0857] A mixture of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (100 mg, 0.48 mmol), TEA (146 mg, 1.45 mmol) and DPPA (267 mg, 0.97 mmol) in Tol (3 mL) was stirred at RT for 1 h, then stirred at 70 oC for 1h. tert-butyl (R)-4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (154 mg, 0.48 mmol) was added to the mixture and stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 5) to give title product (180 mg, Y: 71.4%) as a white solid. ESI-MS (M+H) +: 522.2. Step 2: Preparation of (R)-N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0858] A mixture of tert-butyl (R)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (160 mg, 0.1 mmol) in DCM (4 mL) and TFA (2 mL) was stirred at RT for 1 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (63.99 mg, Y: 49.5%) as a white solid. ESI-MS (M+H) +: 422.1.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.11 (s, 1H), 8.78 (s, 1H), 8.31 (s, 1H), 8.24 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.02 (t, J = 8.7 Hz, 2H), 3.97 (s, 3H), 3.79 (d, J = 11.8 Hz, 2H), 3.42 – 3.33 (m, 2H), 3.23 – 3.10 (m, 4H), 3.04 – 2.94 (m, 1H), 2.31 (s, 3H), 1.34 – 1.22 (m, 3H). Example 311 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate
Figure imgf000458_0001
Step 1: Preparation of tert-butyl 4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0859] A mixture of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (100 mg, 0.48 mmol), TEA (146 mg, 1.45 mmol) and DPPA (267 mg, 0.97 mmol) in Tol (3 mL) was stirred at RT for 1 h, then stirred at 70 oC for 1h. tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (160.9 mg, 0.48 mmol) was added to the mixture and stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 5) to give title product (120 mg, Y: 46.3%) as a white solid. ESI-MS (M+H) +: 536.3. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methylpyrazolo[1,5- a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0860] A mixture of tert-butyl 4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (100 mg, 0.19 mmol) in 4MHCl/EA (4 mL) was stirred at RT for 2 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (95 mg, Y: 93.1%) as a white solid. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 12.24 (s, 1H), 9.09 (s, 2H), 8.28 (d, J = 12.4 Hz, 1H), 8.23 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 6.62 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.03 – 3.99 (m, 2H), 3.96 (s, 3H), 3.51 – 3.42 (m, 2H), 3.34 – 3.24 (m, 4H), 3.19 – 3.10 (m, 2H), 2.31 (s, 3H), 1.38 (s, 6H). Example 312 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000459_0001
step 1 step 2
Figure imgf000459_0002
Step 1: Preparation of 7-methoxy-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride. [0861] To a solution of 6-bromo-7-methoxy-2-methylimidazo[1,2-a]pyridine (8 g, 33.20 mmol) in 1,4-dioxane (200 mL) were added diphenylmethanimine (3.3 g, 17.98 mmol), Pd(OAc)2 (747 mg, 3.23 mmol), BINAP (4.14 g, 6.64 mmol), Cs2CO3 (21.6 g, 66.40 mmol). The mixture was stirred at 115 ℃ for 16 h. The reaction mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH=20:1) to give title product (7 g, yield: 61 %) as a yellow solid. ESI-MS (M+H) +:342.3.1H NMR (400 MHz, DMSO-d6) δ 7.72 – 7.62 (m, 3H), 7.56 = 7.3 Hz, 1H), 7.48 (t, J = 7.5 Hz, 2H), 7.39 – 7.30 (m, 3H), 7.23 (s, 1H), 7.14 (dd, J = 7.4, 1.8 Hz, 2H), 6.70 (s, 1H), 3.70 (s, 3H), 2.18 (s, 3H). Step 2: Preparation of 8-cyclopropyl-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride. [0862] To a solution of N-(7-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (7 g, 20.53 mmol) in EA (50 mL) was added 4M HCl/EA (50 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered, washed with EA (50 mL) and dried in vacuo to give title product (3 g, 68%) as a white solid. ESI-MS (M+H) +:178.2.1H NMR (400 MHz, DMSO-d6) δ 13.92 (s, 1H), 8.00 (s, 1H), 7.77 (s, 1H), 7.09 (s, 1H), 4.01 (s, 3H), 2.37 (d, J = 0.7 Hz, 3H). Step 3: Preparation of tert-butyl 4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0863] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) in THF (20 mL) were added 7- methoxy-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (144 mg, 0.68 mmol), TEA (911 mg, 9.00 mmol) and triphosgene (160 mg, 0.54 mmol) (in THF (1 mL )) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH=20:1) to give title product (80 mg, yield: 33 %) as a brown solid. ESI-MS (M+H) +:536.2.1H NMR (400 MHz, DMSO DMSO-d6) δ 12.15 (s, 1H), 9.12 (s, 1H), 6.90 (s, 1H), 6.41 (d, J = 6.3 Hz, 1H), 5.96 (d, J = 5.9 Hz, 1H), 5.77 (d, J = 4.9 Hz, 1H), 3.98 (s, 3H), 3.70 (d, J = 5.9 Hz, 2H), 3.63 (d, J = 5.2 Hz, 2H), 3.58 (d, J = 5.6 Hz, 2H), 3.53 (s, 2H), 3.39 (d, J = 6.3 Hz, 2H), 2.25 (s, 3H), 1.43 (s, 9H), 1.36 (s, 6H). Step 4: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0864] To a mixture of tert-butyl 4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (70 mg, 0.13 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (45.37 mg, 63%) as a white solid. ESI-MS (M+H) +:436.2.1H NMR (400 MHz, MeOD-d4) δ 9.46 (s, 1H), 8.05 (d, J = 6.0 Hz, 1H), 7.73 (s, 1H), 7.24 (s, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.22 (s, 3H), 4.18 – 4.13 (m, 2H), 3.53 (d, J = 5.9 Hz, 2H), 3.44 (d, J = 5.8 Hz, 2H), 3.35 (s, 2H), 3.26 – 3.22 (m, 2H), 2.47 (d, J = 1.0 Hz, 3H), 1.51 (s, 6H). Example 313 – Preparation of (R)-N-(7-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000461_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0865] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 7-methoxy-2-methylimidazo[1,2- a]pyridin-6-amine (80 mg, 0.37 mmol), triphosgene (112 mg, 0.37 mmol) and TEA (158.6 mg, 1.57 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. the mixture was concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH: DCM=3 %) to give title product (40 mg, crude) as a yellow solid. ESI-MS (M+H) +: 521.8.1H NMR (400 MHz, CDCl3) δ 12.34 (s, 1H), 9.30 (s, 1H), 7.92 (d, J = 5.8 Hz, 1H), 7.36 – 7.32 (m, 2H), 7.13 (s, 1H), 6.38 (d, J = 6.1 Hz, 1H), 4.39 – 4.31 (m, 3H), 4.16 – 4.13 (m, 2H), 4.12 (s, 3H), 3.98 – 3.94 (m, 2H), 3.80 – 3.75 (m, 2H), 3.59 – 3.53 (m, 2H), 2.50 (s, 3H), 1.49 (s, 9H), 1.32 – 1.30 (m, 3H). Step 2: Preparation of (R)-N-(7-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0866] A mixture of tert-butyl (R)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (30 mg, 0.06 mmol) in TFA / DCM (2 mL / 2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (25.79 mg, yield: 80.34 %) as a white solid. ESI-MS (M+H) +: 422.0.1H NMR (400 MHz, MeOD-d4) δ 9.47 (s, 1H), 8.05 (d, J = 6.0 Hz, 1H), 7.73 (s, 1H), 7.24 (s, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.22 (s, 3H), 4.17 – 4.11 (m, 2H), 3.84 (d, J = 13.1 Hz, 2H), 3.52 – 3.50 (m, 2H), 3.29 – 3.18 (m, 4H), 3.03 – 3.01 (m, 1H), 2.47 (d, J = 1.0 Hz, 3H), 1.41 (d, J = 6.6 Hz, 3H). Example 314 – Preparation of ethyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate dihydrochloride.
Figure imgf000462_0001
Step 1: Preparation of ethyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate dihydrochloride. [0867] A mixture of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (3 g, 7.09 mmol) and TEA (2.3 g, 21.28 mmol) in THF (30 mL) was added ethyl carbonochloridate (2.3 g, 21.28 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.1% HCl in water / CH3CN) to give title product (1.5 g, Y: 42.6 %) as a white solid. ESI-MS (M+H) +: 496.2.1H NMR (400 MHz, DMSO-d6) δ 14.63 (s, 1H), 12.66 (s, 1H), 9.63 (s, 1H), 8.17 (s, 1H), 8.06 (d, J = 9.8 Hz, 1H), 7.82 (d, J = 6.0 Hz, 1H), 6.50 (s, 1H), 4.09 – 3.97 (m, 4H), 3.82 – 3.72 (m, 2H), 3.70 – 3.51 (m, 4H), 3.39 (s, 2H), 2.46 (s, 3H), 1.40 (s, 6H), 1.21 (t, J = 7.1 Hz, 3H). Example 315 – Preparation of (R)-N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000463_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0868] To a solution of 6-ethoxy-2-methyl-2H-indazole-5-carboxylic acid (100 mg, 0.45 mmol) in Toluene (10 mL) were added TEA (138 mg, 1.37 mmol) and DPPA (313 mg, 1.14 mmol). The mixture was stirred at 20 oC for 1h. Then the mixture was stirred at 60 oC for another 1h. Tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (145 mg, 0.45 mmol) was added to the mixture and stirred at 90 oC for 16h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:4) to provide title product (110 mg, yield: 46%) as a white solid. ESI-MS (M+H)+: 536.1.1H NMR (400 MHz, DMSO-d6) δ 12.00 (s, 1H), 8.43 (s, 1H), 8.11 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 6.97 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.20 – 4.11 (m, 3H), 4.05 (s, 3H), 4.00 (t, J = 8.6 Hz, 2H), 3.79 (d, J = 13.3 Hz, 1H), 3.62 (d, J = 11.8 Hz, 1H), 3.55 (d, J = 12.8 Hz, 1H), 3.13 (dd, J = 18.0, 8.6 Hz, 3H), 3.03 (dd, J = 12.8, 3.6 Hz, 1H), 2.91 (td, J = 11.7, 3.3 Hz, 1H), 1.52 (t, J = 6.9 Hz, 3H), 1.42 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (R)-N-(6-ethoxy-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0869] To a solution of tert-butyl (R)-4-(1-((6-ethoxy-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (100 mg, 0.19 mmol) in DCM (2 mL) was added TFA (2 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (93 mg, yield: 89%) as a white solid. ESI-MS (M+H)+: 435.9.1H NMR (400 MHz, DMSO-d6) δ 11.93 (s, 1H), 9.08 (s, 1H), 8.74 (s, 1H), 8.43 (s, 1H), 8.13 (s, 1H), 7.91 (d, J = 5.9 Hz, 1H), 6.99 (s, 1H), 6.62 (d, J = 6.0 Hz, 1H), 4.17 – 4.00 (m, 7H), 3.77 (d, J = 11.6 Hz, 2H), 3.39 (s, 2H), 3.15 (t, J = 8.5 Hz, 4H), 3.02 – 2.93 (m, 1H), 1.52 (t, J = 6.8 Hz, 3H), 1.27 (d, J = 6.4 Hz, 3H). [0870] Example 316 – Preparation of (R)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000464_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0871] To a solution of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) and 2,6-dimethyl-2H-indazol-5-amine (101 mg, 0.63 mmol) in THF (10 mL) were added TEA (1 mL) and a solution of triphosgene (187 mg, 0.63 mmol) in THF (1 mL) dropwise to the mixture at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:4) to provide title product (80 mg, yield: 51%) as a pink solid. ESI-MS (M+H)+: 505.8.1H NMR (400 MHz, DMSO-d6) δ 8.21 (s, 2H), 7.93 (d, J = 5.6 Hz, 1H), 7.46 (s, 1H), 6.67 (s, 1H), 4.09 (d, J = 16.4 Hz, 5H), 3.84 (d, J = 8.0 Hz, 2H), 3.38 (d, J = 12.4 Hz, 2H), 3.16 (dd, J = 24.5, 12.0 Hz, 4H), 3.04 (t, J = 12.8 Hz, 1H), 2.42 (s, 3H), 1.28 (d, J = 6.5 Hz, 3H). Step 2: Preparation of (R)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0872] To a solution of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (70 mg, 0.14 mmol) in DCM (1 mL) was added TFA (1 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (64 mg, yield: 88%) as a white solid. ESI-MS (M+H)+: 406.0.1H NMR (400 MHz, DMSO-d6) δ 8.21 (s, 2H), 7.93 (d, J = 5.6 Hz, 1H), 7.46 (s, 1H), 6.67 (s, 1H), 4.09 (d, J = 16.4 Hz, 5H), 3.84 (d, J = 8.0 Hz, 2H), 3.38 (d, J = 12.4 Hz, 2H), 3.16 (dd, J = 24.5, 12.0 Hz, 4H), 3.04 (t, J = 12.8 Hz, 1H), 2.42 (s, 3H), 1.28 (d, J = 6.5 Hz, 3H). Example 317 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000465_0001
step 1 step 2
Figure imgf000465_0002
Step 1: Preparation of 5-bromo-4-methoxypyridin-2-amine. [0873] To a mixture of 4-methoxypyridin-2-amine (5 g, 40.32 mmol) in ACN (100 mL) was NBS (7.2 g, 40.32 mmol) in portions at 0 o C. The mixture was stirred at r.t for 1 h. The solvent was evaporated and DCM was added. The solution was washed with satudium bicarbonate, dried, and concentrated to give title product (8 g, 96%) as a grey solid. ESI-MS (M+H) +: 205.0.1H NMR (400 MHz, DMSO-d6) δ 7.84 (d, J = 2.7 Hz, 1H), 6.12 (s, 1H), 6.07 (s, 2H), 3.80 (s, 3H). Step 2: Preparation of 1,2-diamino-5-bromo-4-methoxypyridin-1-ium 2,4,6- trimethylbenzenesulfonate. [0874] To a solution of 5-bromo-4-methoxypyridin-2-amine (4.5 g, 22.28 mmol) in trichloromethane (200 mL) was added and O-(mesitylsulfonyl) hydroxylamine (10 g, 44.55 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The precipitate was filtered, washed with CHCl3 (50 mL) and dried in vacuo to give tilte product (7.5 g, 80%) as a white solid. ESI-MS (M+H) +: 223.1. 1H NMR (400 MHz, DMSO-d6) δ 8.31 (s, 1H), 8.25 (s, 1H), 6.74 (s, 2H), 6.54 (d, J = 5.4 Hz, 3H), 3.95 (s, 3H), 2.50 (s, 6H), 2.17 (s, 3H). Step 3: Preparation of 6-bromo-7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine. [0875] To a mixture of 1,2-diamino-5-bromo-4-methoxypyridin-1-ium 2,4,6- trimethylbenzenesulfonate (7.5 g, 17.94 mmol) in Ac2O (50 mL) was added O- (mesitylsulfonyl)hydroxylamine (694 mg, 4.04 mmol). The mixture was stirred at 100 oC for 16 h. The reaction was quenched with H2O (100 mL). The resulting mixture was adjusted to PH=9 with NaOH aqueous solution (1 M), and extracted with DCM (80 mL×3). The combined organic layers were washed with brine (100 mL×2), dried over anhydrous Na2SO4, filtrated, and concentrated in vacuo. The residue was diluted with EA (10 mL) and PE (10 mL) and stirred at r.t for 1 h. The precipitate was filtered, washed with PE: EA (5 mL) and dried in vacuo to give title product (3 g, 68%) as a white solid. ESI-MS (M+H) +: 244.0.1H NMR (400 MHz, DMSO-d6) δ 9.20 (s, 1H), 7.25 (s, 1H), 3.97 (s, 3H), 2.41 (s, 3H). Step 4: Preparation of N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0876] To a solution of 6-bromo-7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine (2.8 g, 11.57 mmol) in 1,4-dioxane (70 mL) were added diphenylmethanimine (2.3 g, 12.15 mmol), Pd(OAc)2 (260 mg, 1.16 mmol), BINAP (1.45 g, 2.31 mmol), Cs2CO3 (7.5 g, 23.14 mmol). The mixture was stirred at 115 ℃ for 16 h. The reaction mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (3 g, yield: 75 %) as a yellow solid. ESI-MS (M+H) +:343.1.1H NMR (400 MHz, CDCl3) δ 7.77 (d, J = 7.6 Hz, 2H), 7.67 (s, 1H), 7.52 (t, J = 7.3 Hz, 1H), 7.43 (t, J = 7.7 Hz, 2H), 7.27 (d, J = 6.8 Hz, 3H), 7.16 – 7.11 (m, 2H), 6.76 (s, 1H), 3.80 (s, 3H), 2.47 (s, 3H). Step 5: Preparation of 7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride. [0877] To a solution of N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (2.5 g, 7.31 mmol) in EA (10 mL) was added 4M HCl/EA (10 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered, washed with EA (20 mL) and dried in vacuo to give title product (1.4 g, 89%) as a white solid. ESI-MS (M+H) +: 179.1.1H NMR (400 MHz, DMSO-d6) δ 8.30 (s, 1H), 7.36 (s, 1H), 4.14 (s, 3H), 2.63 (s, 3H). Step 6: Preparation of tert-butyl 4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0878] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) in THF (20 mL) were added 7- methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride (97 mg, 0.45 mmol), TEA (759 mg, 7.50 mmol) and triphosgene (107 mg, 0.36 mmol) (in THF (1 mL )) at 0 ℃.The mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH=10:1) to give title product (80 mg, yield: 49 %) as a white solid. ESI-MS (M+H) +:536.8.1H NMR (400 MHz, CDCl3) δ 12.24 (s, 1H), 9.55 (s, 1H), 7.87 (s, 1H), 7.85 (d, J = 6.1 Hz, 1H), 6.22 (d, J = 6.1 Hz, 1H), 4.15 (d, J = 8.4 Hz, 2H), 4.05 (s, 3H), 3.81 – 3.77 (m, 2H), 3.58 – 3.54 (m, 2H), 3.45 (s, 2H), 3.30 – 3.23 (m, 2H), 2.53 (s, 3H), 1.50 (s, 9H), 1.45 (s, 6H). Step 7: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0879] To a solution of tert-butyl 4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (60 mg, 0.11 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (41.82 mg, 69%) as a white solid. ESI-MS (M+H) +:436.9.1H NMR (400 MHz, MeOD-d4) δ 9.56 (s, 1H), 8.04 (d, J = 6.0 Hz, 1H), 7.24 (s, 1H), 6.63 (d, J = 6.1 Hz, 1H), 4.20 (s, 3H), 4.17 – 4.10 (m, 2H), 3.55 – 3.50 (m, 2H), 3.45 – 3.41 (m, 2H), 3.34 (s, 2H), 3.22 (t, J = 8.5 Hz, 2H), 2.55 (s, 3H), 1.51 (s, 6H). Example 318 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000468_0001
Compound 318 Step 1: Preparation of N'-(5-bromopyridin-2-yl)-N,N-dimethylacetimidamide. [0880] To a mixture of 5-bromopyridin-2-amine (11 g, 64.33 mmol) in MeOH (110 mL) were added 1,1-dimethoxy-N,N-dimethylethan-1-amine (25.67 g, 192.99 mmol). The mixture was heated to reflux at 80°C for 16 h. The mixture was concentrated in vacuo. The mixture was diluted with H2O (110 mL) and extracted with EA (110 mL x 3). The organic phase was washed with brine (110 mLx3), dried over anhydrous Na2SO4 and concentrated in vacuum to afford the title compound (14 g, crude) as a red oil. ESI-MS (M+H) +:242.0 Step 2: Preparation of 6-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyridine. [0881] To a solution of N'-(5-bromopyridin-2-yl)-N,N-dimethylacetimidamide (14 g, 105.26 mmol) and pyridine (24.95 g, 315.78 mmol) in MeOH (140 mL) was added (aminooxy)sulfonic acid (23.58 g, 210.52 mmol) at 0 oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo. The cake was dissolved in H2O and basified to pH 10 with Na2CO3. The mixture was diluted with H2O (150 mL) and extracted with EA (150 mL x 3). The organic phase was washed with brine (150 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (7.1 g, 32.05%) as a yellow solid. ESI-MS (M+H) +:212.01H NMR (400 MHz, CDCl3) δ 8.64 (s, 1H), 7.55 (s, 2H), 2.59 (s, 3H). Step 3: Preparation of N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0882] To a mixture of 6-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyridine (7.1 g, 33.65 mmol), diphenylmethanimine (9.19 g, 50.48 mmol) and BINAP (4.19 g, 6.73 mol) in 1,4-dioxane (70 mL) were added Cs2CO3 (21.94 g, 67.30 mmol) and Pd(OAc)2 (758.25 mg, 3.37 mmol). The mixture was stirred at 115 oC for 16 h under N2. The mixture was diluted with H2O (70 mL) and extracted with EA (70 mL x 3). The organic phase was washed with brine (70 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (7.0 g, 66.69%) as a white solid. ESI-MS (M+H) +:313.1. Step 4: Preparation of 2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride. [0883] A mixture of N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (7.0 g, 22.44 mmol) in 3M HCl/EA (70 mL) was stirred at rt for 2 h. The reaction was diluted with EA (30 mL), the precipitate was filtrated and dried in vacuo to give title product (2.0 g, 60.20%) as a yellow solid. ESI-MS (M+H+): 149.5. Step 5: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0884] To a mixture of t tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) and 2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine hydrochloride (83.13 mg,0.45 mmol) in THF (10 mL) were added TEA (136.35 mg, 1.35 mmol) and triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (100 mg, 43.92 %) as a yellow solid. ESI-MS (M+H)+: 507.3. Step 6: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0885] A mixture of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.20 mmol) in 3M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in water / CH3CN) to give title product (24.61 mg, 23.66%) as a yellow oil. ESI-MS (M+H+): 407.3.1H NMR (400 MHz, DMSO-d6) δ 9.24 (s, 1H), 9.17 (s, 2H), 7.94 (d, J = 6.2 Hz, 1H), 7.72 (d, J = 9.4 Hz, 1H), 7.66 (dd, J = 9.5, 1.8 Hz, 1H), 6.69 (d, J = 6.2 Hz, 1H), 4.08 (t, J = 8.3 Hz, 2H), 3.58 – 3.50 (m, 2H), 3.42 – 3.36 (m, 2H), 3.34 – 3.28 (m, 2H), 3.26 – 3.19 (m, 2H), 2.46 (s, 3H), 1.38 (s, 6H). Example 319 – Preparation of (S)-N-(7-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000470_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0886] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) and 7-methoxy-2-methylimidazo[1,2- a]pyridin-6-amine (84 mg, 0.47 mmol) in THF (10 mL) were added TEA (1 mL) and a solution of triphosgene (140 mg, 0.47 mmol) in THF (1 mL) dropwise to the mixture at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:3) to provide title product (100 mg, yield: 62%) as a pink solid. ESI-MS (M+H)+: 521.8. Step 2: Preparation of (S)-N-(7-methoxy-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0887] To a solution of tert-butyl (S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in DCM (2 mL) was added TFA (2 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (34 mg, yield: 53%) as a white solid. ESI-MS (M+H)+: 422.0.1H NMR (400 MHz, DMSO-d6) δ 12.43 (s, 1H), 9.52 (s, 1H), 9.09 (s, 1H), 8.77 (s, 1H), 8.04 (d, J = 6.0 Hz, 1H), 7.99 (s, 1H), 7.29 (s, 1H), 6.67 (d, J = 6.2 Hz, 1H), 4.18 (s, 3H), 4.03 (t, J = 8.7 Hz, 2H), 3.81 (d, J = 11.5 Hz, 2H), 3.40 (s, 2H), 3.23 – 3.14 (m, 4H), 3.04 – 2.95 (m, 1H), 2.41 (s, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 320 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000471_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0888] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) in THF (5 mL) were added TEA (137 mg, 1.36 mmol), triphosgene (161 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 1 h. Then 7-methoxy-2-methylimidazo[1,2-a]pyridin-6-amine (96 mg, 0.54 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:4) to give the title compound (60 mg, Y: 24.8 %) as a yellow solid. ESI-MS (M+H) +:536.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0889] To a solution of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (50 mg, 0.09 mmol) in DCM (2 mL) was added TFA (1 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.03% TFA in water / ACN) to give title product (26.5 mg, Y: 65.2%) as a yellow solid. ESI-MS (M+H)+:436.3.1H NMR (400 MHz, DMSO-d6) δ 13.90 (s, 1H), 12.44 (s, 1H), 9.53 (s, 1H), 9.29 – 9.22 (m, 1H), 8.67 – 8.58 (m, 1H), 8.03 (d, J = 6.0 Hz, 1H), 8.00 (s, 1H), 7.31 (s, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.19 (s, 3H), 4.03 (t, J = 8.5 Hz, 2H), 3.91 – 3.86 (m, 2H), 3.43 – 3.36 (m, 2H), 3.21 (t, J = 8.5 Hz, 2H), 2.94 – 2.87 (m, 2H), 2.41 (d, J = 0.9 Hz, 3H), 1.27 (d, J = 6.5 Hz, 6H). Example 321 – Preparation of methyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate 2,2,2-trifluoroacetate.
Figure imgf000472_0001
Step 1: Preparation of methyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate 2,2,2-trifluoroacetate. [0890] To a solution of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (100 mg, 0.24 mmol) in THF (5 mL) were added TEA (0.5 mL) and methyl carbonochloridate (1128 mg, 12 mmol) at 0 oC for 5 h. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (32.5 mg, yield: 28 %) as a white solid. ESI-MS (M+H) +:482.3.1H NMR (400 MHz, MeOD- d4) δ 9.29 (d, J = 6.1 Hz, 1H), 7.94 (s, 1H), 7.83 (d, J = 9.2 Hz, 1H), 7.78 (d, J = 7.0 Hz, 1H), 6.66 (d, J = 7.0 Hz, 1H), 4.32 – 4.23 (m, 2H), 3.93 – 3.87 (m, 2H), 3.84 – 3.78 (m, 2H), 3.78 – 3.74 (m, 2H), 3.70 (s, 3H), 3.61 – 3.52 (m, 2H), 2.53 (s, 3H), 1.49 (s, 6H). Example 322 – Preparation of (S)-N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000473_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0891] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2,7-dimethylimidazo[1,2-a]pyrimidin- 6-amine (51 mg, 0.31 mmol) and TEA (1 mL) in THF (8 mL) was added triphosgene (184 mg, 0.62 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (MeOH: DCM= 1: 10) to give title product (100 mg, Y: 62.5%) as a yellow solid. ESI-MS (M+H) +: 506.9. Step 2: Preparation of (S)-N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0892] A mixture of tert-butyl (S)-4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.16 mmol) in DCM (4 mL) and TFA (2 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (47.89 mg, Y: 74.6%) as a white solid. ESI-MS (M+H) +: 407.1.1H NMR (400 MHz, DMSO-d6) δ 12.39 (s, 1H), 9.89 (s, 1H), 9.37 (s, 1H), 9.04 (s, 1H), 8.10 (dd, J = 8.9, 3.5 Hz, 2H), 6.77 (d, J = 6.2 Hz, 1H), 4.15 – 4.10 (m, 2H), 3.93 – 3.88 (m, 2H), 3.48 – 3.43 (m, 2H), 3.34 – 3.21 (m, 4H), 3.14 – 3.07 (m, 1H), 2.86 (s, 3H), 2.54 (s, 3H), 1.36 (d, J = 6.5 Hz, 3H). Example 323 – Preparation of (R)-N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000474_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0893] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2,7-dimethylimidazo[1,2-a]pyrimidin- 6-amine (51 mg, 0.31 mmol) and TEA (1 mL) in THF (8 mL) was added triphosgene (184 mg, 0.62 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (MeOH: DCM= 1:10) to give title product (100 mg, Y: 62.5%) as a yellow solid. ESI-MS (M+H) +: 506.9. Step 2: Preparation of (R)-N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0894] A mixture of tert-butyl (R)-4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (70 mg, 0.14 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (64 mg, Y: 89.0%) as a yellow solid. ESI-MS (M+H) +: 407.1.1H NMR (400 MHz, DMSO-d6) δ 12.32 (s, 1H), 9.83 (s, 1H), 9.29 (s, 1H), 8.96 (s, 1H), 8.09 – 7.97 (m, 2H), 6.70 (d, J = 6.2 Hz, 1H), 4.09 – 4.02 (m, 2H), 3.88 – 3.80 (m, 2H), 3.44 – 3.34 (m, 2H), 3.27 – 3.09 (m, 4H), 3.07 – 2.97 (m, 1H), 2.79 (s, 3H), 2.47 (s, 3H), 1.28 (d, J = 6.5 Hz, 3H). Example 324 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000475_0001
Step 1: Preparation of tert-butyl 7-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0895] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol), 2,7-dimethylimidazo[1,2- a]pyrimidin-6-amine (51 mg, 0.30 mmol) and TEA (1 mL) in THF (8 mL) was added triphosgene (184 mg, 0.60 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (MeOH: DCM= 1: 10) to give title product (60 mg, Y: 38.5%) as a yellow solid. ESI-MS (M+H) +: 519.2. Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0896] A mixture of tert-butyl 7-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (55.62 mg, Y: 89.7%) as a white solid. ESI-MS (M+H) +: 419.1.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 9.89 (s, 1H), 9.50 (s, 2H), 8.09 (dd, J = 9.3, 3.5 Hz, 2H), 6.74 (d, J = 6.2 Hz, 1H), 4.14 – 4.07 (m, 2H), 3.54 – 3.50 (m, 3H), 3.46 – 3.38 (m, 3H), 3.28 – 3.21 (m, 2H), 2.86 (s, 3H), 2.54 (s, 3H), 1.13 (t, J = 6.1 Hz, 2H), 1.01 (t, J = 6.3 Hz, 2H). Example 325 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methylimidazo[1,2-a] pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1- carboxamide.
Figure imgf000476_0001
, , step 1 step 2 Cs 2 CO 3, Pd(OAc)2 HCl/EA BINAP, 1,4-dioxane rt, 2 h
Figure imgf000476_0002
100 C, 16 h step 4
Figure imgf000476_0003
step 3
Figure imgf000476_0004
Step 1: Preparation of 5-bromo-4-methoxypyrimidin-2-amine. [0897] A mixture of 4-methoxypyrimidin-2-amine (50.5 g, 404 mmol) and NBS (71.84 g,403.5 mmol) in CHCI3 (500 mL) was stirred at RT for 6 h. The mixture was diluted with sat-Na2SO3 (400 mL), extracted with EA (400 mL×3), organic layer was concentrated in vacuo to give title compound (80.8 g, Y: 98%) as a yellow solid. ESI-MS (M+H) +: 205.9. Step 2: Preparation of 6-bromo-7-methoxy-2-methylimidazo[1,2-a] pyrimidine. [0898] A mixture of 5-bromo-4-methoxypyrimidin-2-amine (15 g, 73.52 mmol) and 1- chloropropan-2-one (13.6 g, 146.99 mmol) in EtOH (150 mL) was stirred at 90oC for 16 h. The mixture was concentrated in vacuo and the residue was diluted with 1M NaOH (100 mL), extracted with EA (200 mL *2), the combined organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by silica gel column (PE: EA = 1: 3) to give title compound (4.2 g, Y: 23.4%) as a white solid. ESI-MS (M+H) +: 242.0.1H NMR (400 MHz, DMSO-d6) δ 9.20 (s, 1H), 7.43 (d, J = 0.9 Hz, 1H), 4.04 (s, 3H), 2.33 (d, J = 0.7 Hz, 3H). Step 3: Preparation of N-(7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-yl)-1,1- diphenylmethanimine. [0899] A mixture of 6-bromo-7-methoxy-2-methylimidazo[1,2-a] pyrimidine (500 mg, 2.06 mmol), diphenylmethanimine (411 mg, 2.27 mmol) BINAP (257 mg, 0.41 mmol) Pd(OAc)2 (22 mg, 0.21 mmol) and Cs2CO3 (2.02 g, 6.2 mmol) in 1,4-dioxane (100 ml) was stirred at 120℃ for 16 h. The mixture was diluted with water (100 mL), extracted with EA (100 mL×3), the organic layer was concentrated in vacuo. The residue was purified by silica gel column (PE: EA = 1: 3) to give title compound (658 mg, Y: 93%) as a brown solid. ESI-MS (M+H)+: 343.1. Step 4: Preparation of 7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-amine. [0900] A mixture of N-(7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-yl)-1,1- diphenylmethanimine (658 mg, 1.92 mmol) in 4M HCI/EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and diluted with aq Na2CO3 (20 mL), the mixture was stirred at rt for 30 min. Then extracted with EA (20 mL *2), the combined organic layer was washed with brine, dried over sodium sulfate, filtered and concentrated in vacuo to give title compound (210 mg, Y:46%) as a yellow solid. ESI-MS (M+H) +: 179.1.1H NMR (400 MHz, DMSO-d6) δ 8.12 (s, 1H), 7.68 (d, J = 0.9 Hz, 1H), 4.10 (s, 3H), 2.35 (d, J = 0.8 Hz, 3H). Step 5: Preparation of tert-butyl 4-(1-((7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0901] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (240 mg, 2 mmol) and 7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-amine (223.8 mg, 0.67mmol), TEA (204 mg,2 mmol) in THF (10 mL) was added triphosgent (400.4 mg, 1.3 mmol) at 0oC, the mixture stirred at rt for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 4) to give title compound (156 mg, Y: 65%) as a white solid. ESI-MS (M+H) +: 537.2. Step 6: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. [0902] A mixture of tert-butyl 4-(1-((7-methoxy-2-methylimidazo[1,2-a] pyrimidin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (136 mg, 0.25 mmol) in 4M HCI/EA (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / ACN) to give title product (17.06 mg, 15%) as a yellow solid. ESI-MS (M+H)+: 437.21H NMR (400 MHz, DMSO-d6) δ 12.10 (s, 1H), 9.33 (s, 1H), 7.92 (d, J = 6.1 Hz, 1H), 7.47 (d, J = 0.9 Hz, 1H), 6.51 (d, J = 6.2 Hz, 1H), 5.95 (s, 1H), 4.07 (s, 3H), 3.98 (t, J = 8.5 Hz, 2H), 3.16 (d, J = 5.9 Hz, 2H), 3.11 (d, J = 8.7 Hz, 2H), 2.99 (s, 2H), 2.87 – 2.81 (m, 2H), 2.24 (s, 3H), 1.08 (s, 6H). Example 326 – Preparation of N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000478_0001
seae u e step 2 step 1
Figure imgf000478_0002
Step 1: Preparation of 2,7-dimethyl-6-nitro-[1,2,4]triazolo[1,5-a]pyridine. [0903] To a mixture of 2-chloro-4-methyl-5-nitropyridine (6 g, 34.88 mmol) and 5-methyl- 1,3,4-thiadiazol-2-amine (4.0 g, 34.88 mmol) in Tol (60 mL) was added DIEA (9.07 g, 69.76 mmol). The mixture was stirred at RT for 2 h in a sealed tube. The mixture was diluted with H2O (100 mL) and extracted with EA (100 mL x 3). The organic phase was washed with brine (100 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (4 g, 59.72%) as a white solid. ESI-MS (M+H) +: 193.1. Step 2: Preparation of 2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine. [0904] To a solution of 2,7-dimethyl-6-nitro-[1,2,4]triazolo[1,5-a]pyridine (4 g, 20.83 mmol) in MeOH (40 mL) was added Raney-Ni (1 g, 25%w.t). The mixture was stirred at RT for 16 h under H2. The mixture was filtered and filtrate was concentrated in vacuo to give title compound (1.0 g, 29.62%) as a brown oil. ESI-MS (M+H)+:163.2. Step 3: Preparation of tert-butyl 4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0905] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2,7-dimethyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine (73.19 mg, 0.45 mmol) in THF (10 mL) were added TEA (136.35 mg, 1.35 mmol) and triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (50 mg, 21.37%) as a yellow solid. ESI-MS (M+H) +: 521.3. Step 4: Preparation of N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0906] A mixture of tert-butyl 4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (50 mg, 0.1 mmol) in 3M HCl/EA (5 mL) was stirred at rt for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in water / CH3CN) to give title product (3.15 mg, 5.90%) as a yellow solid. ESI-MS (M+H) +:421.2.1H NMR (400 MHz, MeOD-d4) δ 9.52 (s, 1H), 8.00 (d, J = 5.9 Hz, 1H), 7.62 (s, 1H), 6.65 (d, J = 6.1 Hz, 1H), 4.20 – 4.13 (m, 2H), 3.59 – 3.53 (m, 2H), 3.45 – 3.42 (m, 2H), 3.38 – 3.36 (m, 2H), 3.27 – 3.23 (m, 2H), 2.62 (s, 3H), 2.55 (s, 3H), 1.51 (s, 6H).
Example 327 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000480_0001
Step 1: Preparation of 1,2-diamino-5-bromo-4-fluoropyridin-1-ium 2,4,6- trimethylbenzenesulfonate. [0907] To a solution of 5-bromo-4-fluoropyridin-2-amine (3 g, 15.71 mmol) in CHCl3 (200 mL) was added O-(mesitylsulfonyl)hydroxylamine (8442 mg, 39.27 mmol) at 0 oC. The mixture was stirred at r.t for 2h. The precipitate was filtered, washed with with CHCl3 (10 mL) to give title compound (5.3 g, yield: 83%) as a white solid.1H NMR (400 MHz, DMSO- d6) δ 8.60 (d, J = 6.7 Hz, 1H), 7.01 (d, J = 9.0 Hz, 1H), 6.75 (s, 2H), 2.50 (s, 6H), 2.17 (s, 3H). Step 2: Preparation of 6-bromo-7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridine. [0908] To a solution of 1,2-diamino-5-bromo-4-fluoropyridin-1-ium 2,4,6- trimethylbenzenesulfonate (5 g, 12.32 mmol) in AcOH (50 mL) was added TsOH (424 mg, 2.46 mmol). The mixture was stirred at 100 oC for 16 hours. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA= 3: 1) to give title compound (1.6 g, yield: 56%) as a white solid. ESI-MS (M+H)+: 230.0.1H NMR (400 MHz, DMSO-d6) δ 9.47 (d, J = 6.5 Hz, 1H), 7.87 (d, J = 9.0 Hz, 1H), 2.46 (s, 3H). Step 3: Preparation of N-(7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0909] A mixture of 6-bromo-7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridine (1 g, 4.35 mmol), Benzenemethanimine (1180 mg, 6.52 mmol), Pd(OAc)2 (99 mg, 0.44 mmol) and BINAP (542 mg, 0.87 mmol) in 1,4-dioxane (20 mL) was purged with N2 for three times at r.t. Then the mixture was stirred at 100 oC for 16 hours. The mixture was cooled to r.t, filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:1) to provide title product (1.2 g, yield: 84%) as a yellow solid. ESI-MS (M+H)+: 331.0.1H NMR (400 MHz, DMSO-d6) δ 8.48 (d, J = 7.2 Hz, 1H), 7.75 – 7.71 (m, 2H), 7.59 (dd, J = 11.7, 8.8 Hz, 2H), 7.52 (t, J = 7.5 Hz, 2H), 7.41 – 7.36 (m, 3H), 7.26 (dd, J = 7.3, 2.1 Hz, 2H), 2.37 (s, 3H). Step 4: Preparation of 4-methoxy-2-methylbenzo[d]oxazol-6-amine HCl salt. [0910] To a solution of N-(7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (1 g, 3.03 mmol) in EtOAc (5 mL) was added 4M HCl/EtOAc (15 mL) at 0 oC. Then the mixture was stirred at r.t for 2 hours. The precipitate was filtered, washed with EtOAc to afford title product (630 mg, crude) as a white solid. ESI-MS (M+H)+: 167.1. 1H NMR (400 MHz, DMSO-d6) δ 8.44 (d, J = 7.1 Hz, 1H), 7.90 (d, J = 10.0 Hz, 1H), 6.29 (s, 3H), 2.53 (s, 3H). Step 5: Preparation of tert-butyl 4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0911] To a solution of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) and 7-fluoro-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (60 mg, 0.36 mmol) in THF (10 mL) were added TEA (1 mL) and a solution of triphosgene (134 mg, 0.45 mmol) in THF (1 mL) dropwise at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=4:1) to provide title product (100 mg, yield: 64%) as a white solid. ESI-MS (M+H)+: 525.1.1H NMR (400 MHz, DMSO-d6) δ 12.41 (s, 1H), 9.45 (d, J = 6.8 Hz, 1H), 7.83 (d, J = 6.1 Hz, 1H), 7.79 (d, J = 10.9 Hz, 1H), 6.43 (d, J = 6.2 Hz, 1H), 4.01 – 3.95 (m, 2H), 3.74 – 3.69 (m, 2H), 3.60 – 3.56 (m, 2H), 3.55 (s, 2H), 3.31 (s, 2H), 2.44 (s, 3H), 1.44 (s, 9H), 1.38 (s, 6H). Step 6: Preparation of 4- dimethylpiperazin-1-yl)-N-(7-fluoro-2-methyl-
Figure imgf000482_0001
[1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0912] To a solution of tert-butyl 4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (80 mg, 0.15 mmol) in EA (2 mL) was added 4M HCL/EtOAc (6 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (40 mg, yield: 63%) as a white solid. ESI-MS (M+H)+: 424.9.1H NMR (400 MHz, DMSO-d6+D2O) δ 9.41 (s, 1H), 7.95 (s, 1H), 7.77 (d, J = 10.1 Hz, 1H), 6.65 (d, J = 4.3 Hz, 1H), 4.06 (t, J = 8.6 Hz, 2H), 3.50 (s, 2H), 3.33 (s, 2H), 3.29 (s, 2H), 3.20 (t, J = 8.1 Hz, 2H), 2.45 (s, 3H), 1.38 (s, 6H). Example 328 – Preparation of isopropyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate.
Figure imgf000482_0002
Step 1: Preparation of isopropyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [0913] To a solution of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (130 mg, 0.31 mmol) in THF (5 mL) were added TEA (0.5 mL) and isopropyl carbonochloridate (1891 mg, 15.5 mmol) at 0 oC for 5 h. The reaction mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product. The mixture was diluted with H2O (1 mL) and aq. Na2CO3 (1 mL) at RT for 0.5 h and extracted with DCM (1 mL×3). The organic layer was concentrated in vacuo to give title product (17.13 mg, 11 %) as a white solid. ESI-MS (M+H) +:510.1.1H NMR (400 MHz, DMSO-d6) δ 12.11 (s, 1H), 9.19 (d, J = 7.5 Hz, 1H), 7.81 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.41 (d, J = 11.6 Hz, 1H), 6.41 (d, J = 6.2 Hz, 1H), 4.84 – 4.73 (m, 1H), 4.03 – 3.93 (m, 2H), 3.77 – 3.69 (m, 2H), 3.63 – 3.53 (m, 4H), 3.31 – 3.26 (m, 2H), 2.28 (s, 3H), 1.39 (s, 6H), 1.21 (d, J = 6.2 Hz, 6H). [0914] Example 329 – Preparation of 1-(isobutyryloxy)ethyl 4-(1-((7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,2-dimethylpiperazine-1-carboxylate.
Figure imgf000483_0001
Step 1: Preparation of pentyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [0915] To a mixture of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (150 mg, 0.35 mmol) in DMF (10 mL) were added TEA (107 mg, 1.06 mmol), 1-(((4- nitrophenoxy)carbonyl)oxy)ethyl isobutyrate (316 mg, 1.06 mmol). The reaction mixture was stirred at r.t for 16 h. Concentration under reduced pressure, the residue was purified by prep- HPLC (0.1% NH3.H2O in H2O / ACN) to give title compound (66.43 mg, 32 %) as a white solid. ESI-MS (M+H) +:582.2.1H NMR (400 MHz, MeOD-d4) δ 9.15 (d, J = 7.1 Hz, 1H), 7.83 (d, J = 6.2 Hz, 1H), 7.53 (s, 1H), 7.22 (d, J = 11.0 Hz, 1H), 6.78 (d, J = 5.4 Hz, 1H), 6.39 (d, J = 6.2 Hz, 1H), 4.09 – 4.03 (m, 2H), 3.87 – 3.81 (m, 2H), 3.64 – 3.59 (m, 2H), 3.57 (s, 2H), 3.35 – 3.33 (m, 2H), 2.60 – 2.50 (m, 1H), 2.36 (s, 3H), 1.50 (d, J = 5.4 Hz, 3H), 1.47 (d, J = 5.5 Hz, 6H), 1.16 (d, J = 2.7 Hz, 3H), 1.14 (d, J = 2.7 Hz, 3H). Example 330 – Preparation of pentyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate.
Figure imgf000484_0001
Step 1: Preparation of pentyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [0916] To a mixture of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (50 mg, 0.12 mmol) in THF (5 mL) were added TEA (304 mg, 3.00 mmol), pentyl carbonochloridate (217 mg, 1.44 mmol) (in THF (1 mL)) in 0℃. The reaction mixture was stirred at r.t for 16 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title compound (5.9 mg, 9 %) as a white solid. ESI-MS (M+H) +:538.3.1H NMR (400 MHz, MeOD-d4) δ 9.15 (d, J = 7.1 Hz, 1H), 7.83 (d, J = 6.1 Hz, 1H), 7.52 (s, 1H), 7.22 (d, J = 11.0 Hz, 1H), 6.39 (d, J = 6.2 Hz, 1H), 4.12 – 4.03 (m, 4H), 3.87 – 3.82 (m, 2H), 3.63 – 3.58 (m, 2H), 3.56 (s, 2H), 2.36 (s, 3H), 1.71 – 1.64 (m, 2H), 1.47 (s, 6H), 1.41 – 1.36 (m, 4H), 1.31 (d, J = 18.2 Hz, 2H), 0.94 (t, J = 7.1 Hz, 3H). Example 331 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000485_0001
Step 1: Preparation of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate. [0917] A mixture of4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (2 g, 12.94 mmol) and tert-butyl 3,8-diazabicyclo[3.2.1]octane-8-carboxylate (3293 mg, 15.53 mmol) was stirred at 140 oC for 16 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (DCM: MeOH = 5:1) to provide title product (730 mg, yield: 17%) as a white solid. ESI-MS (M+H) +:331.2.1H NMR (400 MHz, DMSO-d6) δ 7.51 (d, J = 5.9 Hz, 1H), 6.02 (d, J = 6.0 Hz, 1H), 4.17 (s, 2H), 3.37 (d, J = 8.0 Hz, 4H), 2.99 (t, J = 8.4 Hz, 2H), 2.86 (d, J = 11.3 Hz, 2H), 1.79 (d, J = 10.9 Hz, 4H), 1.42 (s, 9H). Step 2: Preparation of tert-butyl (S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0918] To a solution of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (150 mg, 0.45 mmol) and 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (90 mg, 0.55 mmol) in THF (10 mL) were added TEA (2 mL) and a solution of triphosgene (202 mg, 0.18 mmol) in THF (1 mL) dropwise at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=1:3) to provide title product (100 mg, yield: 43%) as a brown solid. ESI-MS (M+H)+: 522.2. Step 3: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0919] To a solution of tert-butyl 3-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (40 mg, 0.08 mmol) in EtOAc (0.5 mL) was added 4M HCl/EtOAc (1.5 mL) at room temperature. The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (26 mg, yield: 77%) as a white solid. ESI-MS (M+H)+:421.9.1H NMR (400 MHz, DMSO-d6) δ 12.46 (s, 1H), 9.68 (d, J = 6.6 Hz, 1H), 9.07 (d, J = 17.0 Hz, 2H), 8.17 (s, 1H), 8.09 (d, J = 10.0 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.59 (d, J = 6.2 Hz, 1H), 4.14 (s, 2H), 4.05 (t, J = 8.5 Hz, 2H), 3.70 (d, J = 12.0 Hz, 2H), 3.29 (d, J = 12.4 Hz, 2H), 3.23 (t, J = 8.5 Hz, 2H), 2.45 (d, J = 0.9 Hz, 3H), 1.97 (s, 4H). Example 332 – Preparation of 4-(3,9-diazabicyclo[3.3.1]nonan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000486_0001
Step 1: Preparation of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9- diazabicyclo[3.3.1]nonane-9-carboxylate. [0920] To a solution of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (573 mg, 3.72 mmol) and tert-butyl 3,9-diazabicyclo[3.3.1]nonane-9-carboxylate (840 mg, 3.72 mmol) in DIEA (998 mg, 7.74 mmol) was stirred at 140 oC for 16 h in a sealed tube. The mixture was concentrated in vacuo and diluted with H2O (5 mL), extracted DCM (5mL*3). The organic layer was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1, DCM: MeOH= 10: 1) to give title product (130 mg, 12%) as a white solid. ESI-MS (M+H) +: 345.3. Step 2: Preparation of tert-butyl 3-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9-diazabicyclo[3.3.1]nonane-9- carboxylate. [0921] To a solution of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9- diazabicyclo[3.3.1]nonane-9-carboxylate (100 mg, 0.29 mmol) and 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (72 mg, 0.43 mmol) in THF (5 mL) were added TEA (0.5 mL) and triphosgene (103 mg, 0.35 mmol) at 0 oC . The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA =0: 1) to give title product (90 mg, 58%) as a white solid. ESI-MS (M+H) +: 536.4.1H NMR (400 MHz, DMSO-d6) δ 12.01 (d, J = 2.1 Hz, 1H), 9.20 (d, J = 7.4 Hz, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.73 (d, J = 4.2 Hz, 1H), 7.42 (d, J = 11.6 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.16 – 4.08 (m, 2H), 4.05 – 3.99 (m, 2H), 3.87 – 3.74 (m, 2H), 3.26 – 3.21 (m, 2H), 3.16 – 3.11 (m, 2H), 2.29 (s, 3H), 1.84 – 1.71 (m, 4H), 1.67 – 1.60 (m, 1H), 1.44 (s, 9H), 1.40 – 1.34 (m, 1H). Step 3: Preparation of 4-(3,9-diazabicyclo[3.3.1]nonan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0922] To a solution of tert-butyl 3-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9-diazabicyclo[3.3.1]nonane-9- carboxylate (80 mg, 0.15 mmol) in EA (1 mL) was added 4M HCl / EA (3 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % FA in water / CH3CN) to give title product (21.52 mg, yield: 32 %) as a white solid. ESI-MS (M+H) +: 436.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (d, J = 1.9 Hz, 1H), 9.19 (d, J = 7.4 Hz, 1H), 8.27 (s, 1H), 7.88 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.42 (d, J = 11.6 Hz, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.03 – 3.98 (m, 2H), 3.78 – 3.75 (m, 2H), 3.30 – 3.21 (m, 6H), 2.29 (s, 3H), 2.25 – 2.14 (m, 1H), 1.94 – 1.76 (m, 4H), 1.57 – 1.46 (m, 1H). Example 333 – Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- isopropylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000488_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- isopropylpiperazine-1-carboxylate. [0923] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (600 mg, 3.90 mmol) and tert-butyl (R)-2-isopropylpiperazine-1-carboxylate (888.31 mg, 3.90 mmol) in DIEA (5 mL) was stirred at 145 oC for 36 h in a sealed tube. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (10 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (300 mg, 22.23%) as a yellow solid. ESI-MS (M+H) +: 347.3. Step 2: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-isopropylpiperazine-1- carboxylate. [0924] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- isopropylpiperazine-1-carboxylate (300 mg, 0.87 mmol), 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine hydrochloride (174.28 mg, 0.87 mmol) in THF (10 mL) were added TEA (263.61 mg, 2.61 mmol) and triphosgene (515.04 mg, 1.74 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (70 mg, 14.98%) as a yellow solid. ESI-MS (M+H) +: 538.2. Step 3: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- isopropylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0925] A mixture of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-isopropylpiperazine-1- carboxylate (70 mg, 0.13 mmol) in 3M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (3.79 mg, 6.04%) as a yellow solid. ESI-MS (M+H) +:437.9.1H NMR (400 MHz, MeOD-d4) δ 9.18 (d, J = 7.1 Hz, 1H), 8.41 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.54 (s, 1H), 7.24 (d, J = 11.0 Hz, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.14 – 4.04 (m, 2H), 3.92 – 3.77 (m, 2H), 3.47 – 3.41 (m, 1H), 3.27 – 3.21 (m, 1H), 3.19 – 3.08 (m, 4H), 2.98 – 2.88 (m, 1H), 2.36 (s, 3H), 2.01 – 1.89 (m, 1H), 1.12 (dd, J = 9.4, 6.9 Hz, 6H). [0926] Example 334 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- isopropylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000489_0001
Step 1: Preparation of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- isopropylpiperazine-1-carboxylate. [0927] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (400 mg, 2.58 mmol) in DIEA (998 mg, 7.74 mmol) was added tert-butyl (S)-2-isopropylpiperazine-1-carboxylate (647 mg, 2.84 mmol). The reaction mixture was stirred at 140℃ for 16 h in a sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mLx3). The combined organic layer was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=2:1) to give title product (500 mg, yield: 56 %) as a brown solid. ESI-MS (M+H) +:347.2. 1H NMR (400 MHz, CDCl3) δ 7.63 (d, J = 6.2 Hz, 1H), 6.08 (d, J = 6.2 Hz, 1H), 4.05 – 4.04 (m, 1H), 3.75 (dd, J = 7.8, 5.4 Hz, 1H), 3.62 (dd, J = 16.6, 8.3 Hz, 3H), 3.48 (d, J = 10.4 Hz, 1H), 3.11 – 2.99 (m, 3H), 2.92 – 2.85 (m, 2H), 2.29 – 2.18 (m, 1H), 1.48 (s, 9H), 0.99 (d, J = 6.5 Hz, 3H), 0.88 (d, J = 6.8 Hz, 3H). Step 2: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-isopropylpiperazine-1- carboxylate. [0928] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- isopropylpiperazine-1-carboxylate (100 mg, 0.29 mmol) in THF (20 mL) were added 7- fluoro-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (88 mg, 0.43 mmol), TEA (734 mg, 7.25 mmol) and triphosgene (103 mg, 0.35 mmol) (in THF ( 1 mL)) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (80 mg, yield: 51 %) as a white solid. ESI-MS (M+H) +:537.9.1H NMR (400 MHz, CDCl3) δ 12.11 (d, J = 2.1 Hz, 1H), 9.16 (d, J = 7.2 Hz, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.25 (s, 1H), 7.18 (d, J = 11.1 Hz, 1H), 6.37 (d, J = 6.1 Hz, 1H), 4.16 (td, J = 8.6, 2.4 Hz, 2H), 3.66 (d, J = 12.6 Hz, 1H), 3.17 – 3.11 (m, 2H), 3.07 (d, J = 6.7 Hz, 2H), 3.01 – 2.79 (m, 4H), 2.41 (s, 3H), 2.26 – 2.21 (m, 1H), 1.48 (s, 9H), 1.01 – 0.99 (m, 3H), 0.89 – 0.86 (m, 3H). Step 3: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- isopropylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0929] To a mixture of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-isopropylpiperazine-1- carboxylate (60 mg, 0.11 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title compound (14.94 mg, 24 %) as a white solid. ESI-MS (M+H) +:437.9.1H NMR (400 MHz, MeOD-d4) δ 9.63 (d, J = 6.5 Hz, 1H), 8.02 (d, J = 6.0 Hz, 1H), 7.92 (s, 1H), 7.79 (d, J = 9.7 Hz, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.22 – 4.11 (m, 2H), 4.00 – 3.85 (m, 2H), 3.52 – 3.47 (m, 1H), 3.35 – 3.33 (m, 1H), 3.27 – 3.16 (m, 4H), 3.08 – 2.95 (m, 1H), 2.51 (d, J = 0.8 Hz, 3H), 2.04 – 1.93 (m, 1H), 1.14 (dd, J = 8.7, 6.9 Hz, 6H). Example 335 – Preparation of (S)-4-(3-ethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000491_0001
Step 1: Preparation of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- ethylpiperazine-1-carboxylate. [0930] To a mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (400 mg, 2.58 mmol) in DIEA (998 mg, 7.74 mmol) was added tert-butyl (S)-2-ethylpiperazine-1-carboxylate (607 mg, 2.84 mmol). The reaction mixture was stirred at 140℃ for 16 h in a sealed tube. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mLx3). The combined organic layer was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=2:1) to give title product (600 mg, yield: 70 %) as a brown solid. ESI-MS (M+H) +:333.0. 1H NMR (400 MHz, CDCl3) δ 7.47 (d, J = 6.6 Hz, 1H), 6.04 (d, J = 6.7 Hz, 1H), 3.68 (t, J = 8.5 Hz, 2H), 3.56 (t, J = 11.4 Hz, 2H), 3.14 – 3.07 (m, 4H), 2.98 (dt, J = 11.9, 5.9 Hz, 1H), 2.88 (d, J = 8.4 Hz, 1H), 1.82 (dt, J = 15.1, 7.6 Hz, 1H), 1.59 (dt, J = 13.8, 7.8 Hz, 1H), 1.48 (s, 9H), 0.91 (t, J = 7.4 Hz, 3H). Step 2: Preparation of tert-butyl (S)-2-ethyl-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0931] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- ethylpiperazine-1-carboxylate (120 mg, 0.36 mmol) in THF (20 mL) were added 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine hydrochloride (110 mg, 0.54 mmol), TEA (728 mg, 7.20 mmol) and triphosgene (128 mg, 0.43F mmol) (in THF ( 1 mL)) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=2:1) to give title product (60 mg, yield: 31 %) as a brown solid. ESI-MS (M+H) +:523.8.1H NMR (400 MHz, CDCl3) δ 12.11 (d, J = 2.1 Hz, 1H), 9.16 (d, J = 7.1 Hz, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.25 (s, 1H), 7.19 (d, J = 11.1 Hz, 1H), 6.36 (d, J = 6.1 Hz, 1H), 4.15 (d, J = 8.4 Hz, 2H), 4.05 – 4.04 (m, 1H), 3.51 (d, J = 12.2 Hz, 3H), 3.18 – 3.10 (m, 3H), 3.05 (dd, J = 12.6, 3.7 Hz, 1H), 2.97 – 2.91 (m, 1H), 2.41 (s, 3H), 1.63 – 1.61 (m, 2H), 1.49 (s, 9H), 0.93 (t, J = 7.4 Hz, 3H). Step 3: Preparation of ((S)-4-(3-ethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. To a mixture of tert-butyl (S)-2-ethyl-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (40 mg, 0.076 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep- HPLC (0.1% FA in H2O / ACN) to give title compound (7.85 mg, 22 %) as a white solid. ESI-MS (M+H) +:424.1.1H NMR (400 MHz, MeOD-d4) δ 9.16 (d, J = 7.0 Hz, 1H), 8.43 (s, 1H), 7.94 (d, J = 6.0 Hz, 1H), 7.53 (s, 1H), 7.22 (d, J = 11.0 Hz, 1H), 6.56 (d, J = 6.0 Hz, 1H), 4.16 – 4.03 (m, 2H), 3.88 – 3.74 (m, 2H), 3.47 – 3.41 (m, 1H), 3.28 – 3.11 (m, 5H), 2.97 – 2.87 (m, 1H), 2.36 (s, 3H), 1.80 – 1.66 (m, 2H), 1.10 (t, J = 7.5 Hz, 3H). Example 338 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-((3R,5S)- 3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000492_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0932] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (100 mg, 0.3 mmol) and TEA (1mL) in THF (8 mL) was added triphosgene (178 mg, 0.6 mmol) at 0oC, the mixture was stirred at RT for 1 h.2,7- dimethylimidazo[1,2-a]pyrimidin-6-amine (49 mg, 0.3 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (MeOH: DCM = 1: 10) to give title product (80 mg, Y: 51.3.0%) as a yellow solid. ESI-MS (M+H) +: 520.9. Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyrimidin-6-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0933] A mixture of tert-butyl (2R,6S)-4-(1-((2,7-dimethylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (60 mg, 0.12 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (48.35 mg, Y: 99.8 %) as a white solid. ESI-MS (M+H) +: 421.2.1H NMR (400 MHz, DMSO-d6) δ 12.33 (s, 1H), 9.83 (s, 1H), 9.22 (s, 1H), 8.61 (d, J = 10.3 Hz, 1H), 8.03 (dd, J = 10.5, 3.6 Hz, 2H), 6.72 (d, J = 6.2 Hz, 1H), 4.08 – 4.02 (m, 2H), 3.94 – 3.87 (m, 2H), 3.46 – 3.34 (m, 2H), 3.29 – 3.18 (m, 2H), 2.98 – 2.86 (m, 2H), 2.79 (s, 3H), 2.47 (d, J = 0.9 Hz, 3H), 1.27 (d, J = 6.5 Hz, 6H). [0934]
Example 339 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methylimidazo[1,2-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide diformate.
Figure imgf000494_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0935] To a solution of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (50 mg, 0.15 mmol) and 7-methoxy-2-methylimidazo[1,2- a]pyrimidin-6-amine (27 mg, 0.15 mmol) in THF (5 mL) were added TEA (0.5 mL) and a solution of triphosgene (67 mg, 0.23 mmol) in THF (0.5 mL) dropwise at 0 oC. The mixture was stirred at r.t for 16h. The mixture was concentrated in vacuo. The residue was purified by prep-TLC (DCM: MeOH = 40: 1) to provide title product (90 mg, crude) as a yellow solid. ESI-MS (M+H)+:536.9.1H NMR (400 MHz, CDCl3) δ 12.05 (s, 1H), 9.26 (s, 1H), 7.96 (d, J = 6.1 Hz, 1H), 7.03 (s, 1H), 6.41 (d, J = 6.0 Hz, 1H), 4.29 – 4.24 (m, 4H), 4.18 (s, 3H), 4.15 (d, J = 8.7 Hz, 2H), 3.45 (d, J = 12.3 Hz, 2H), 3.03 (d, J = 7.9 Hz, 2H), 2.39 (s, 3H), 1.44 (s, 9H), 1.36 (d, J = 3.7 Hz, 6H). Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methylimidazo[1,2-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [0936] To a solution of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methylimidazo[1,2- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title compound (11.74 mg, yield: 18%) as a white solid. ESI-MS (M+H)+: 436.9.1H NMR (400 MHz, DMSO-d6) δ 12.09 (s, 1H), 9.32 (s, 1H), 8.20 (s, 2H), 7.92 (d, J = 6.1 Hz, 1H), 7.46 (s, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.07 (s, 3H), 3.97 (d, J = 8.9 Hz, 2H), 3.65 (d, J = 11.5 Hz, 2H), 3.15 (t, J = 8.5 Hz, 2H), 2.92 (s, 2H), 2.46 (s, 2H), 2.24 (s, 3H), 1.06 (d, J = 6.3 Hz, 6H). Example 340 – Preparation of N-(7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000495_0001
Step 1: Preparation of tert-butyl 7-(1-((7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0937] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (40 mg, 0.13 mmol), 7-methoxy-2-methylimidazo[1,2- a]pyrimidin-6-amine (22.4 mg, 0.13 mmol) and TEA (252 mg, 2.5 mmol) in THF (6 mL) was added triphosgene (74 mg, 0.25 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA= 1: 4) to give title product (50 mg, Y: 78.0%) as a yellow solid. ESI-MS (M+H) +: 535.4. Step 2: Preparation of N-(7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0938] A mixture of tert-butyl 7-(1-((7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (40 mg, 0.07 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (13 mg, Y: 40.07%) as a yellow solid. ESI-MS (M+H) +: 435.1. 1H NMR (400 MHz, DMSO-d6) δ 12.46 (s, 1H), 9.67 (s, 1H), 9.30 (s, 2H), 8.05 (d, J = 6.0 Hz, 1H), 7.87 (d, J = 1.1 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 4.24 (s, 3H), 4.03 (t, J = 8.5 Hz, 2H), 3.61 – 3.58 (m, 2H), 3.39 – 3.27 (m, 4H), 3.16 (t, J = 8.5 Hz, 2H), 2.39 (d, J = 1.0 Hz, 3H), 1.10 – 0.89 (m, 4H). Example 341 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2,6- dimethylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000496_0001
n Step 1 rt, 16 h RT,16h Step 2 Step 3
Figure imgf000496_0002
Step 1: Preparation of 3-methylpyridin-4-amine. [0939] A mixture of 3-methyl-4-nitropyridine (11 g, 79.14 mol) in MeOH (220 mL) was added Pd/C (2.2 g, 20%), the mixture was stirred at 50 oC for 16 h under H2. The mixture was filtered and the filtrate was concentrated in vacuo to give title product (9.8 g, crude) as a yellow solid. ESI-MS (M+H) +: 109.0. Step 2: Preparation of tert-butyl (3-methylpyridin-4-yl)carbamate. [0940] A mixture of 3-methylpyridin-4-amine (18 g, 166.67 mol), (Boc)2O (39.9 g, 183.33 mmol), DMAP (4.01 g, 33.33 mmol) and TEA (50.5 g, 500.01 mmol) in THF (500 mL) was stirred at RT for 16 h. The mixture was concentrated in vacuo. The mixture was diluted with water (100 mL), extracted with DCM (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 70 %) to give title product (33 g, yield: 95.19 %) as an orange solid. ESI-MS (M+H) +: 209.3.1H NMR (400 MHz, CDCl3) δ 8.35 (d, J = 5.6 Hz, 1H), 8.29 (s, 1H), 7.98 (d, J = 5.6 Hz, 1H), 2.21 (s, 3H), 1.54 (s, 9H). Step 3: Preparation of 1-amino-4-((tert-butoxycarbonyl)amino)-3-methylpyridin-1-ium 2,4- dinitrophenolate. [0941] A mixture of tert-butyl (3-methylpyridin-4-yl)carbamate(32 g, 0.154 mol), O-(2,4- dinitrophenyl)hydroxylamine (30.6 g, 0.154 mol) was stirred at 40 oC for 5 h. Then the mixture was stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (56 g, crude) as a yellow solid. ESI-MS (M+CH3CN) +: 224.1. Step 4: Preparation of ethyl 5-((tert-butoxycarbonyl)amino)-2,6-dimethylpyrazolo[1,5- a]pyridine-3-carboxylate. [0942] A mixture of 1-amino-4-((tert-butoxycarbonyl)amino)-3-methylpyridin-1-ium 2,4- dinitrophenolate (17 g, 105.65 mol), ethyl but-2-ynoate (13 g, 116.21 mol), K2CO3 (21 g, 158.4 mol) in DMF (20 mL) was stirred at RT for 16 h. The mixture was diluted with water (100 mL), extracted with DCM (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 100 %) to give title product (11 g, crude) as a yellow solid. ESI-MS (M+H) +: 334.1. Step 5: Preparation of 2,6-dimethylpyrazolo[1,5-a]pyridin-5-amine. [0943] A mixture of ethyl 5-((tert-butoxycarbonyl)amino)-2,6-dimethylpyrazolo[1,5- a]pyridine-3-carboxylate(1.7 g, 5.10 mol) in HBr (25 mL) was stirred at 100 oC for 16 h. The mixture was diluted with water (200 mL), adjusted pH to 7~8 by Na2CO3, the precipitate was filtered and dried to give title product (660 mg, 79.88 %) as a yellow solid. ESI-MS (M+H) +: 162.2.1H NMR (400 MHz, DMSO-d6) δ 8.07 (s, 1H), 6.37 (s, 1H), 5.75 (s, 1H), 5.30 (s, 2H), 2.22 (s, 3H), 2.05 (d, J = 0.5 Hz, 3H). Step 6: Preparation of tert-butyl (2R,6S)-4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [0944] A mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mol), 2,6-dimethylpyrazolo[1,5-a]pyridin-5- amine (57.96 mg, 0.36 mmol), triphosgene (107 mg, 0.36 mmol) and TEA (364 mg, 3.61 mmol) in THF (5 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL) and the precipitate was filtered to afford title product (70 mg, crude) as a white solid. ESI-MS (M+H) +: 520.2. Step 7: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2,6-dimethylpyrazolo[1,5- a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0945] A mixture of tert-butyl (2R,6S)-4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (70 mg, 0.13 mmol) in 3M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (5.36 mg, yield: 9.8 %) as an off-white solid. ESI-MS (M+H) +: 420.0.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 8.41 (s, 1H), 8.24 (s, 1H), 8.19 (s, 1H), 7.88 (d, J = 6.1 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 6.16 (s, 1H), 3.99 (t, J = 8.5 Hz, 2H), 3.63 (d, J = 12.1 Hz, 2H), 3.17 – 3.13 (m, 2H), 2.88 – 2.81 (m, 2H), 2.45 – 2.40 (m, 2H), 2.34 (s, 3H), 2.31 (s, 3H), 1.02 (d, J = 6.2 Hz, 6H). Example 342 – Preparation of (S)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000498_0001
Compound 342 Step 1: Preparation of tert-butyl (S)-4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0946] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) in THF (5 mL) were added TEA (143 mg, 1.42 mmol), triphosgene (168 mg, 0.57 mmol) at 0oC. The mixture was stirred at r.t for 1 h.2,6-dimethylpyrazolo[1,5-a]pyridin-5-amine hydrochloride (112 mg, 0.57 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (60 mg, Y: 25.2 %) as a yellow solid. ESI-MS (M+H) +:506.3.1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 8.42 (s, 1H), 8.24 (s, 1H), 7.93 (d, J = 5.9 Hz, 1H), 6.54 (d, J = 5.9 Hz, 1H), 6.17 (s, 1H), 3.82 – 3.75 (m, 2H), 3.69 – 3.64 (m, 2H), 3.63 – 3.57 (m, 2H), 3.11 – 3.06 (m, 2H), 2.99 – 2.91 (m, 3H), 2.35 (s, 3H), 2.32 (s, 3H), 1.43 (s, 9H), 1.19 (d, J = 6.6 Hz, 3H). Step 2: Preparation of (S)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [0947] To a solution of tert-butyl (S)-4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (2 mL). The reaction mixture was stirred at r.t for 2 h and concentrated in vacuo.The crude was purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (30.88 mg, 60.1 %) as a white solid. ESI-MS (M+H)+:406.1.1H NMR (400 MHz, DMSO-d6) δ 11.89 (s, 1H), 9.15 – 9.05 (m, 1H), 8.82 – 8.71 (m, 1H), 8.41 (s, 1H), 8.23 (s, 1H), 7.96 (d, J = 5.8 Hz, 1H), 6.63 (d, J = 6.0 Hz, 1H), 6.17 (s, 1H), 4.02 (t, J = 8.5 Hz, 2H), 3.80 (d, J = 12.0 Hz, 2H), 3.38 (d, J = 9.7 Hz, 2H), 3.20 – 3.13 (m, 4H), 3.02 – 2.95 (m, 1H), 2.33 (d, J = 9.1 Hz, 6H), 1.27 (d, J = 6.4 Hz, 3H). Example 343 – Preparation of (R)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000499_0001
Compound 343 Step 1: Preparation of tert-butyl (R)-4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0948] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (20 mL) were added TEA (314 mg, 3.10 mmol) and triphosgene (111 mg, 0.37 mmol) (in THF (1 mL )) in 0 ℃. The reaction mixture was stirred at r.t for 1 h. Then 2,6-dimethylpyrazolo[1,5-a]pyridin-5-amine (73 mg, 0.37 mmol) was added to the reaction solution and stirred at r.t for16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=2:1) to give title product (70 mg, yield: 44 %) as a white solid. ESI-MS (M+H) +:506.2.1H NMR (400 MHz, CDCl3) δ 11.83 (s, 1H), 8.34 (s, 1H), 8.12 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.35 (d, J = 6.1 Hz, 1H), 6.11 (s, 1H), 4.35 – 4.34 (m, 1H), 4.22 – 4.15 (m, 2H), 3.97 (d, J = 12.9 Hz, 1H), 3.53 (d, J = 12.3 Hz, 1H), 3.44 (d, J = 12.2 Hz, 1H), 3.28 – 3.21 (m, 1H), 3.11 (dd, J = 18.5, 9.6 Hz, 3H), 2.97 (dd, J = 11.9, 3.6 Hz, 1H), 2.43 (s, 3H), 2.38 (s, 3H), 1.56 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (R)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0949] To a mixture of tert-butyl (R)-4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.098 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (26.27 mg, 48%) as a white solid. ESI-MS (M+H) +:406.1.1H NMR (400 MHz, DMSO-d6) δ 12.00 (s, 1H), 8.40 (s, 1H), 8.23 (s, 1H), 8.21 (s, 1H), 7.89 (d, J = 6.1 Hz, 1H), 6.57 – 6.51 (m, 1H), 6.16 (s, 1H), 4.01 – 3.97 (m, 2H), 3.63 – 3.60 (m, 2H), 3.16 – 3.11 (m, 2H), 3.01 – 2.97 (m, 1H), 2.94 – 2.74 (m, 4H), 2.34 (s, 3H), 2.31 (s, 3H), 1.05 (d, J = 6.3 Hz, 3H). Example 344 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2,6- dimethylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000501_0001
Compound 344 Step 1: Preparation of tert-butyl 4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [0950] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (120 mg, 0.36 mmol), 2,6-dimethylpyrazolo[1,5-a]pyridin- 5-amine hydrochloride (71.20 mg, 0.36 mmol) in THF (10 mL) were added TEA (109.08 mg, 1.08 mmol) and triphosgene (213.12 mg, 0.72 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 32.11%) as a white solid. ESI-MS (M+H) +: 520.3. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin- 5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0951] A mixture of tert-butyl 4-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (60 mg, 0.12 mmol) in 3M HCl/EA (5 mL) was stirred at rt for 2h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (5.41 mg, 9.70%) as a white solid. ESI-MS (M+H) +:420.2.1H NMR (400 MHz, MeOD-d4) δ 8.52 (s, 1H), 8.26 (s, 1H), 8.18 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.57 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.14 – 4.08 (m, 2H), 3.42 – 3.39 (m, 2H), 3.23 – 3.22 (m, 2H), 3.22 – 3.11 (m, 4H), 2.40 (s, 3H), 2.38 (s, 3H), 1.41 (s, 6H). Example 345 – Preparation of N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000502_0001
Compound 345 Step 1: Preparation of tert-butyl 7-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [0952] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mol), 2,6-dimethylpyrazolo[1,5-a]pyridin- 5-amine (58 mg, 0.36 mmol), triphosgene (107 mg, 0.36 mmol) and TEA (364 mg, 3.61 mmol) in THF (5 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O and the precipitate was filtered to afford title product (100 mg, crude) as a white solid. ESI-MS (M+H) +: 518.3.1H NMR (400 MHz, DMSO-d6) δ 11.97 (s, 1H), 8.40 (s, 1H), 8.23 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 6.16 (s, 1H), 3.98 (t, J = 8.5 Hz, 2H), 3.58 – 3.55 (m, 2H), 3.30 – 3.28 (m, 2H), 3.13 – 3.09 (m, 4H), 2.34 (s, 3H), 2.31 (s, 3H), 1.42 (s, 9H), 0.95 – 0.93 (m, 2H), 0.86 – 0.84 (m, 2H). Step 2: Preparation of N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0953] A mixture of tert-butyl 7-(1-((2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.19 mmol) in 3M HCl /EA (3 mL) was stirred at RT for 2 h. [0954] The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (37.15 mg, yield: 46.89 %) as a pink-white solid. ESI-MS (M+H) +: 418.0.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 8.40 (s, 1H), 8.23 (s, 1H), 8.16 (s, 1H), 7.88 (d, J = 6.0 Hz, 1H), 6.50 (d, J = 6.2 Hz, 1H), 6.16 (s, 1H), 4.00 – 3.95 (m, 2H), 3.26 – 3.24 (m, 2H), 3.12 – 3.06 (m, 4H), 2.88 – 2.85 (m, 2H), 2.34 (s, 3H), 2.31 (s, 3H), 0.50 (d, J = 12.4 Hz, 4H). Example 346 – Preparation of 4-(8-ethyl-3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro- 2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000503_0001
Step 1: Preparation of 4-(8-ethyl-3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0955] To a solution of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (50 mg, 0.12 mmol) in MeOH (10 mL) were added MeCHO (27 mg, 0.60 mmol), CH3COOH (43 mg, 0.72 mmol). The mixture was stirred at r.t for 1 h, NaBH3CN (23 mg, 0.36 mmol) was added to the mixture and stirred at r.t for 16 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (11.41 mg, yield: 19 %) as a white solid. ESI-MS (M+H) +:449.9.1H NMR (400 MHz, MeOD-d4) δ 9.19 (d, J = 7.1 Hz, 1H), 8.40 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.56 (s, 1H), 7.26 (d, J = 10.9 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.14 – 4.02 (m, 4H), 3.76 (d, J = 11.9 Hz, 2H), 3.39 – 3.35 (m, 2H), 3.26 – 3.21 (m, 2H), 3.17 – 3.10 (m, 2H), 2.37 (s, 3H), 2.30 – 2.20 (m, 2H), 2.20 – 2.09 (m, 2H), 1.37 (t, J = 7.2 Hz, 3H). Example 347 – Preparation of 4-(8-(cyclopropylmethyl)-3,8-diazabicyclo[3.2.1]octan-3- yl)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000503_0002
Step 1: Preparation of 4-(8-(cyclopropylmethyl)-3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7- fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate. [0956] To a solution of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (50 mg, 0.12 mmol) in MeOH/THF (2 mL/2 mL) were added cyclopropanecarbaldehyde (103 mg, 0.59 mmol) and HOAc (33 mg, 0.36 mmol). The mixture was stirred at r.t for 1h. NaBH3CN (37 mg, 0.59 mmol) was added to the mixture and stirred at 50 oC for 16h. The mixture was purified by prep-TLC (DCM: MeOH = 20: 1) and prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (1.20 mg, yield: 2%) as a white solid. ESI-MS (M+H)+: 476.1.1H NMR (400 MHz, MeOD-d4) δ 9.62 (d, J = 6.5 Hz, 1H), 7.99 (d, J = 6.3 Hz, 1H), 7.91 (s, 1H), 7.77 (d, J = 9.8 Hz, 1H), 6.60 (d, J = 6.1 Hz, 1H), 4.30 (s, 2H), 4.20 – 4.11 (m, 2H), 3.84 (d, J = 12.3 Hz, 2H), 3.48 – 3.43 (m, 2H), 3.26 (s, 2H), 3.06 (d, J = 6.8 Hz, 2H), 2.51 (s, 3H), 2.27 (s, 2H), 2.20 (d, J = 9.6 Hz, 2H), 1.17 – 1.15 (m, 1H), 0.81 (q, J = 6.0 Hz, 2H), 0.50 (t, J = 5.3 Hz, 2H). Example 348 – Preparation of (R)-4-(3-ethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide TFA salt.
Figure imgf000504_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- ethylpiperazine-1-carboxylate. [0957] To a mixture of tert-butyl (R)-2-ethylpiperazine-1-carboxylate (900 mg, 4.21 mmol) in DIEA (1 mL) was added 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (543 mg, 3.50 mmol). The mixture was stirred at 140oC for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA = 100:0 to 0:100, DCM: MeOH = 100: 0 to 95: 5) to give the title compound (600 mg, Y: 51.6 %) as a white solid. ESI-MS (M+H) +:333.2. Step 2: Preparation of tert-butyl (R)-2-ethyl-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [0958] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- ethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) in THF (5 mL) were added TEA (136 mg, 1.35 mmol), triphosgene (161 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 1 h.7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (89 mg, 0.54 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and extracted with EA (20 mL*3). The combined organic layer was washed with brine (30 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (60 mg, Y: 24.9 %) as a white solid. ESI-MS (M+H) +: 524.3. Step 3: Preparation of (R)-4-(3-ethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt. [0959] To a solution of tert-butyl (R)-2-ethyl-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (2 mL). The reaction mixture was stirred at r.t for 2 h and concentrated in vacuo. The crude was purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (25.19 mg, 56.2 %) as a white solid. ESI-MS (M+H)+:424.1.1H NMR (400 MHz, CDCl3) δ 9.30 (d, J = 7.2 Hz, 1H), 8.99 (s, 2H), 7.96 (d, J = 6.0 Hz, 1H), 7.82 (s, 1H), 7.57 (d, J = 11.3 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 4.03 (t, J = 8.5 Hz, 2H), 3.83 (t, J = 11.5 Hz, 2H), 3.39 – 3.35 (m, 2H), 3.20 – 3.12 (m, 4H), 2.97 (dd, J = 13.7, 10.6 Hz, 1H), 2.32 (s, 3H), 1.69 – 1.58 (m, 2H), 1.00 (t, J = 7.5 Hz, 3H). Example 349 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2-b] pyridazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
Figure imgf000506_0001
Step 1: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methylimidazo[1,2-b] pyridazin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [0960] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2-methylimidazo[1,2-b] pyridazin-6- amine (89 mg, 0.61 mmol) and TEA (1 mL) in THF (10 mL) was added triphosgene (179 mg, 0.60 mmol) at 0oC and the mixture was stirred at RT for 16h. The mixture was concentrated in vacuo and diluted with water (10 mL), extracted with EA (10 mL×3). The organic layer washed with brine, dried with Na2 SO4 and concentrated in vacuo to give crude. The crude was purified by silica gel column (PE: EA = 1: 3) to give title product (70 mg, Y: 46.0%) as a yellow solid. ESI-MS (M+H) +: 507.2. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2-b] pyridazine -6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. [0961] A mixture of tert-butyl 2,2-dimethyl-4-(1-((2-methylimidazo[1,2-b] pyridazin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (70 mg, 0.13 mmol) in 4M HCI/EA (2 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % FA in water / CH3CN) to give title product (14.24 mg, 23%) as a yellow solid. ESI-MS (M+H) +: 407.2.1H NMR (400 MHz, DMSO-d6) δ12.42 (s, 1H), 8.26 (s, 1H), 8.04 – 7.96 (m, 2H), 7.96 – 7.94 (m, 1H), 7.91 (s, 1H), 6.55 (d, J = 6.2 Hz, 1H), 4.00 (t, J = 8.0 Hz, 2H), 3.29 – 3.19 (m, 2H), 3.13 (t, J = 8.5 Hz 2H), 3.08 (s, 2H), 2.98 – 2.89 (m, 2H), 2.35 (s, 3H), 1.15 (s, 6H). [0962] Example 350 – Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide diformate.
Figure imgf000507_0001
Step 1: Preparation of 2-chloro-4-(difluoromethyl)pyridine. [0963] To a solution of 2-chloroisonicotinaldehyde (25 g, 177.30 mmol) in DCM (250 mL) was added DAST (71.37 g, 443.26 mmol) drop-wise over 15 minutes below 5 °C. Then the solution was stirred allowed to warm slowly to room temperature and stirred overnight. The reaction mixture was gradually added to saturated sodium hydrogen carbonate solution (100 mL) and ice (250 mL), making sure that the pH of the solution was >7 at all times. After 30 minutes the mixture was diluted with DCM (200mL) and water (200 mL) and the organic phase separated. The aqueous phase was further extracted with DCM (2 x 200mL). The organic phase was washed with brine (10 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/10) to afford title product (20 g, 68.93%) as a yellow solid. ESI-MS (M+H) +: 164.0. Step 2: Preparation of N- (difluoromethyl)pyridin-2-yl)-1,1-diphenylmethanimine.
Figure imgf000508_0001
[0964] To a mixture of 2-chloro-4-(difluoromethyl)pyridine (20 g, 122.70 mmol), diphenylmethanimine (34.50 g, 184.05 mmol) and BINAP (15.29 g, 24.54 mmol) in 1,4- dioxane (200 mL) were added Cs2CO3 (80.00 g, 245.40 mmol) and Pd(OAc)2 (2.77 mg, 12.27 mmol). The mixture was stirred at 115 oC for 16 h under N2. The mixture was diluted with H2O (200 mL) and extracted with EA (200 mL x 3). The organic phase was washed with brine (200 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (25 g, 66.59%) as a brown solid. ESI-MS (M+H) +:309.1. Step 3: Preparation of 4-(difluoromethyl)pyridin-2-amine hydrochloride. [0965] A mixture of N-(4-(difluoromethyl)pyridin-2-yl)-1,1-diphenylmethanimine (25 g, 81.17 mmol) in 4M HCl/EA (250 mL) was stirred at 85 oC for 2 h. The reaction was diluted with EA (250 mL), the precipitate was filtrated and dried in vacuo to give title product (6.0 g, 41.06%) as a yellow solid. ESI-MS (M+H+): 145.5. Step 4: Preparation of 5-bromo-4-(difluoromethyl)pyridin-2-amine. [0966] To a mixture of 4-(difluoromethyl)pyridin-2-amine hydrochloride (6 g, 33.33 mmol) in THF (60 mL) were added NBS (5.34 g, 30.00 mmol). The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (60 mL) and extracted with EA (60 mL x 3). The organic phase was washed with brine (60 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (3.0 g, 44.83%) as a yellow solid. ESI-MS (M+H) +: 224.9. Step 5: Preparation of 6-bromo-7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridine. [0967] To a mixture of 5-bromo-4-(difluoromethyl)pyridin-2-amine (3.0 g, 17.94 mmol) in IPA (30 mL) were added 1-bromo-2,2-dimethoxypropane (3.57 g, 19.73 mmol) and PPTS (10.63 g, 21.53 mmol). The mixture was stirred at 85oC for 16 h. The mixture was diluted with sat.Na2CO3 (30 mL) and extracted with EA (30 mL*3), the organic layer was washed with brine (30 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 5: 1) to get title product (2.0 g, Y: 42.70%) as a white solid. ESI-MS (M+H) +: 262.9.1H NMR (400 MHz, DMSO-d6) δ 8.99 (s, 1H), 7.82 – 7.75 (m, 2H), 7.12 (t, J = 54.1 Hz, 1H), 2.38 (s, 3H). Step 6: Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine. [0968] To a mixture of 6-bromo-7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridine (2.0 g, 7.66 mmol), diphenylmethanimine (2.09 g, 11.49 mmol) and BINAP (954.44 mg, 1.53 mmol) in 1,4-dioxane (20 mL) were added Cs2CO3 (4.99 g, 15.32 mmol) and Pd(OAc)2 (173.12 mg, 0.77 mmol). The mixture was stirred at 115 oC for 16 h under N2. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (1.2 g, 43.34%) as a brown solid. ESI-MS (M+H) +:362.2. Step 7: Preparation of 7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride. [0969] A mixture of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (1.2 g, 3.32 mmol) in 4M HCl/EA (20 mL) was stirred at rt for 2 h. The reaction was diluted with EA (20 mL), the precipitate was filtrated and dried in vacuo to give title product (700 mg, 90.49%) as a yellow solid. ESI-MS (M+H+): 198.5. Step 8: Preparation of tert-butyl 7-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0970] To a mixture of 7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-amine hydrochloride (150 mg, 0.64 mmol), tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (253.44 mg, 0.77 mmol) in THF (10 mL) were added TEA (233.31 mg, 2.31 mmol) and triphosgene (457.38 mg, 1.54 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 22.60%) as a white solid. ESI-MS (M+H) +: 554.5. Step 9: Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [0971] A mixture of tert-butyl 7-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (80 mg,0.14 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (20.60 mg, 26.70%) as a white solid. ESI-MS (M+H) +:454.3. 1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 9.09 (s, 1H), 8.16 (s, 2H), 7.85 – 7.80 (m, 2H), 7.70 (s, 1H), 7.13 (t, J = 54.3 Hz, 1H), 6.49 (d, J = 6.2 Hz, 1H), 3.99 – 3.95 (m, 2H), 3.28 – 3.25 (m, 2H), 3.13 – 3.07 (m, 4H), 2.91 – 2.87 (m, 2H), 2.35 (s, 3H), 0.57 – 0.50 (m, 4H). Example 351 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-N-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000510_0001
Compound 351 Step 1: Preparation of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)(methyl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine- 1-carboxylate. [0972] To a solution of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate ( 200 mg, 0.38 mmol) in dry-THF (5 mL) was added NaH (46 mg, 1.91 mmol) at 0o C and stirred for 1 h. Then CH3I (264 mg, 1.91 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with water (2 mL), concentrated in vacuo and purified by prep-TLC (DCM: MeOH= 10: 1) to give compound (200 mg, crude) as a yellow solid. ESI-MS (M+H) +: 538.2. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-N-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0973] To a solution of tert-butyl 4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)(methyl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine- 1-carboxylate (180 mg, 0.34 mmol) in EA (2 mL) was added 4M HCl / EA (5 mL). The reaction mixture was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % NH3·H2O in water / CH3CN) to give title product (12.67 mg, yield: 9 %) as a white solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, DMSO-d6) δ 8.63 (d, J = 7.5 Hz, 1H), 7.62 (d, J = 5.9 Hz, 1H), 7.53 (s, 1H), 7.25 (d, J = 11.3 Hz, 1H), 6.23 (d, J = 6.0 Hz, 1H), 3.78 – 3.71 (m, 2H), 3.23 (s, 3H), 2.96 – 2.85 (m, 4H), 2.81 – 2.74 (m, 4H), 2.24 (s, 3H), 1.03 (s, 6H). Example 352 – Preparation of (S)-N-(7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000511_0001
Compound 352 Step 1: Preparation of tert-butyl (S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0974] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (50 mg, 0.16 mmol), 7-methoxy-2-methylimidazo[1,2- a]pyrimidin-6-amine (28 mg, 0.16 mmol) and TEA (330 mg, 3.2 mmol) in THF (1 mL) was added triphosgene (92 mg, 0.31 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA= 1: 4) to give title product (50 mg, Y: 61.1%) as a yellow solid. ESI-MS (M+H) +: 523.4. Step 2: Preparation of (S)-N-(7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0975] A mixture of tert-butyl (S)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in DCM (2 mL) and TFA (1 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (29 mg, Y: 89.8%) as a yellow solid. ESI-MS (M+H) +: 423.1.1H NMR (400 MHz, DMSO-d6) δ 12.49 (s, 1H), 9.68 (s, 1H), 9.15 (s, 1H), 8.84 (s, 1H), 8.05 (d, J = 6.1 Hz, 1H), 7.88 (d, J = 1.0 Hz, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.25 (s, 3H), 4.04 (t, J = 8.6 Hz, 2H), 3.84 – 3.79 (m, 2H), 3.41 – 3.35 (m, 2H), 3.24 – 3.09 (m, 4H), 3.06 – 2.95 (m, 1H), 2.40 (s, 3H), 1.28 (d, J = 6.5 Hz, 3H). Example 353 – Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000512_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [0976] A mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mol), 7-(difluoromethyl)-2- methylimidazo[1,2-a]pyridin-6-amine (84 mg, 0.36 mmol), triphosgene (107 mg, 0.36 mmol) and TEA (365 mg, 3.61 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The residue was diluted with H2O and the precipitate was filtered to afford title product (80 mg, crude) as a white solid. ESI-MS (M+H) +: 556.2. Step 2: Preparation of N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [0977] A mixture of tert-butyl (2R,6S)-4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (70 mg, 0.13 mmol) in 3M HCl /EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered to give title product (11.99 mg, yield: 20.27 %) as a yellow solid. ESI-MS (M+H) +: 456.1.1H NMR (400 MHz, DMSO-d6+D2O) δ 9.48 (s, 1H), 8.14 (d, J = 12.9 Hz, 2H), 7.94 (d, J = 6.1 Hz, 1H), 7.46 – 7.15 (m, 1H), 6.70 (d, J = 5.8 Hz, 1H), 4.10 – 4.06 (m, 2H), 3.92 – 3.88 (m, 2H), 3.42 – 3.36 (m, 2H), 3.27 – 3.21 (m, 2H), 2.95 (t, J = 12.8 Hz, 2H), 2.52 (s, 3H), 1.30 (d, J = 6.4 Hz, 6H). Example 354 – Preparation of (R)-N-(7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000513_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0978] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mol), 7-(difluoromethyl)-2- methylimidazo[1,2-a]pyridin-6-amine (88 mg, 0.38 mmol), triphosgene (112 mg, 0.38 mmol) and TEA (381 mg, 3.77 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O and the precipitate was filtered to afford title product (100 mg, crude) as a white solid. ESI-MS (M+H) +: 541.8.1H NMR (400 MHz, CDCl3) δ 11.92 (s, 1H), 8.99 (s, 1H), 7.91 (d, J = 5.9 Hz, 1H), 7.70 (s, 1H), 7.37 (s, 1H), 6.89 – 6.77 (m, 1H), 6.36 (d, J = 6.1 Hz, 1H), 4.18 – 4.14 (m, 2H), 4.00 – 3.95 (m, 2H), 3.46 – 3.40 (m, 2H), 3.25 – 3.20 (m, 2H), 3.15 – 3.11 (m, 3H), 2.46 (s, 3H), 1.49 (s, 9H), 1.31 – 1.29 (m, 3H). Step 2: Preparation of (R)-N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0979] A mixture of tert-butyl (R)-4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (80 mg, 0.15 mmol) in 3M HCl /EA (2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (14.29 mg, yield: 21.60 %) as a yellow solid. ESI-MS (M+H) +: 442.1.1H NMR (400 MHz, DMSO-d6) δ 11.83 (s, 1H), 9.09 (s, 1H), 8.26 (s, 1H), 7.86 – 7.81 (m, 2H), 7.70 (s, 1H), 7.13 (t, J = 54.3 Hz, 1H), 6.52 (d, J = 6.1 Hz, 1H), 3.98 (t, J = 8.6 Hz, 2H), 3.61 (d, J = 12.1 Hz, 2H), 3.14 (t, J = 8.5 Hz, 2H), 2.98 (d, J = 11.2 Hz, 1H), 2.90 – 2.76 (m, 3H), 2.58 – 2.52 (m, 1H), 2.35 (s, 3H), 1.04 (d, J = 6.3 Hz, 3H). Example 355 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(8- methyl-3,8-diazabicyclo[3.2.1]octan-3-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000514_0001
Compound 355 Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(8-methyl-3,8- diazabicyclo[3.2.1]octan-3-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0980] To a solution of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (50 mg, 0.12 mmol) in MeOH (5 mL) were added (HCOH)n (10.7 mg, 0.36 mmol) and HOAc (23 mg, 0.60 mmol). The mixture was stirred at r.t for 1h. NaBH3CN (23 mg, 0.36 mmol) was added to the mixture and stirred at 50 oC for 16 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in H2O / ACN) to give title compound (6.51 mg, yield: 12%) as a white solid. ESI-MS (M+H)+: 436.2. H NMR (400 MHz, DMSO-d6) δ 12.47 (s, 1H), 11.23 (s, 1H), 9.68 (d, J = 6.4 Hz, 1H), 8.17 (s, 1H), 8.07 (d, J = 10.0 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 6.60 (d, J = 6.0 Hz, 1H), 4.04 (s, 4H), 3.75 (d, J = 13.2 Hz, 4H), 3.27 – 3.21 (m, 2H), 2.73 (d, J = 4.8 Hz, 3H), 2.45 (s, 3H), 2.19 (s, 2H), 1.98 (d, J = 8.5 Hz, 2H).
Example 356 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000515_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [0981] A mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 7-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (116 mg, 0.54 mmol), triphosgene (161 mg, 0.54 mmol) and TEA (547 mg, 5.42 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O and the precipitate was filtered to afford title product (100 mg, crude) as a white solid. ESI-MS (M+H) +: 537.2. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0982] A mixture of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in 4M HCl /EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% NH3·H2O in H2O / ACN) to give title product (18.32 mg, yield: 28.01 %) as a yellow solid. ESI-MS (M+H) +: 437.2.1H NMR (400 MHz, DMSO-d6) δ 12.31 (s, 1H), 9.36 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.19 (s, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.07 (s, 3H), 3.99 (t, J = 8.6 Hz, 2H), 3.60 (d, J = 11.8 Hz, 2H), 3.14 (t, J = 8.5 Hz, 2H), 2.82 – 2.76 (m, 2H), 2.39 – 2.37 (m, 4H), 2.25 – 2.24 (m, 1H), 1.00 (d, J = 6.2 Hz, 6H). Example 357 – Preparation of (S)-N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000516_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0983] To a solution of 7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (150 mg, 0.45 mmol) in THF (10 mL) were added TEA (381 mg, 3.77 mmol) and triphosgene (113 mg, 0.38 mmol). Then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added to the mixture and stirred at r.t for 16h. The mixture was diluted with H2O (20 mL), and the precipitate was filtered to provide title product (60 mg, yield: 37%) as a white solid. ESI-MS (M+H)+:522.8. Step 2: Preparation of (S)-N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [0984] To a solution of tert-butyl (S)-4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in DCM (1 mL) was added TFA (1 mL). The mixture was stirred at r.t for 2h. The mixture was concentrated in vacuo, the residue was purified by prep- HPLC (0.05% NH3.H2O in H2O / ACN) to give title compound (9.69 mg, yield: 23%) as a white solid. ESI-MS (M+H)+: 423.2.1H NMR (400 MHz, DMSO-d6) δ 12.22 (s, 1H), 9.35 (s, 1H), 7.98 (s, 1H), 7.18 (s, 1H), 6.60 (s, 1H), 4.07 (s, 3H), 4.01 – 4.00 (m, 2H), 3.73 – 3.71 (m, 2H), 3.17 – 3.15 (m, 5H), 2.97 – 2.95 (m, 2H), 2.38 (s, 3H), 1.23 – 1.21 (m, 3H). Example 358 – Preparation of (R)-N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000517_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0985] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) in THF (5 mL) were added TEA (143 mg, 1.42 mmol), triphosgene (168 mg, 0.57 mmol) at 0oC. The mixture was stirred at r.t for 1 h.7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (101 mg, 0.57 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and extracted with EA (20 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (70 mg, Y: 28.4 %) as a yellow solid. ESI-MS (M+H) +:523.5. Step 2: Preparation of (R)-N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0986] To a solution of tert-butyl (R)-4-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (2 mL). The reaction mixture was stirred at r.t for 2 h and concentrated in vacuo. The crude was purified by prep- HPLC (0.03% TFA in water / ACN) to give title compound (37.94 mg, 73.9 %) as a white solid. ESI-MS (M+H)+: 423.2.1H NMR (400 MHz, DMSO-d6) δ 12.26 (s, 1H), 9.39 (s, 1H), 9.16 – 9.06 (m, 1H), 8.83 – 8.71 (m, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.26 (s, 1H), 6.64 (d, J = 6.1 Hz, 1H), 4.10 (s, 3H), 4.03 (t, J = 8.6 Hz, 2H), 3.80 (d, J = 11.8 Hz, 2H), 3.42 – 3.35 (m, 2H), 3.20 – 3.12 (m, 4H), 2.99 (dd, J = 13.7, 10.4 Hz, 1H), 2.42 (s, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 359 – Preparation of N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000518_0001
Compound 359 Step 1: Preparation of tert-butyl 7-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [0987] To a solution of 7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride (97.44 mg, 0.45 mmol) and TEA (0.63 mL,4.54 mmol) in THF (10 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, then tert-butyl 7-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) was added slowly at 0oC. The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column chromatography (PE: EA= 1: 5) to give the compound (110 mg, crude) as an off-white solid. ESI-MS (M+H) +: 535.2. Step 2: Preparation of N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0988] To a mixture of tert-butyl 7-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (100 mg, 0.19 mmol) in EA (2 mL) was added HCl / EA (3 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (15 mg, Y: 18.46 %) as a yellow solid. ESI- MS (M+H) +: 435.1.1H NMR (400 MHz, DMSO-d6) δ 12.29 (s, 1H), 9.36 (s, 1H), 8.15 (s, 2H), 7.93 (d, J = 6.0 Hz, 1H), 7.19 (s, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.07 (s, 3H), 4.00 – 3.96 (m, 2H), 3.29 – 3.27 (m, 2H), 3.15 – 3.13 (m, 2H), 3.11 – 3.07 (m, 2H), 2.94 – 2.89 (m, 2H), 2.38 (s, 3H), 0.56 (d, J = 3.9 Hz, 4H). [0989] Example 360 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate formate.
Figure imgf000519_0001
Compound 360 Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [0990] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (111 mg, 0.34 mmol) and TEA (507 mg, 5.03 mmol) in THF (8 mL) was added triphosgene (100 mg, 0.34 mmol) at 0oC, the mixture was stirred at RT for 1 h.6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (60 mg, 0.34 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (EA) to give title product (70 mg, Y: 39.2%) as a yellow solid. ESI-MS (M+H) +: 537.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0991] A mixture of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (60 mg, 0.11 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (29 mg, Y: 59.4 %) as a white solid. ESI-MS (M+H) +: 437.1.1H NMR (400 MHz, DMSO-d6) δ 12.18 (s, 1H), 8.67 (s, 1H), 8.25 (s, 1H), 8.14 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.10 – 4.02 (m, 6H), 3.98 (t, J = 8.5 Hz, 2H), 3.65 – 3.64 (m, 2H), 3.13 (t, J = 8.5 Hz, 2H), 2.93 – 2.83 (m, 2H), 2.49 – 2.38 (m, 2H), 1.04 (d, J = 6.3 Hz, 6H). Example 361 – Preparation of (S)-N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000520_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [0992] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (107 mg, 0.34 mmol), 6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-amine (60 mg, 0.34 mmol) and TEA (507 mg, 5.03 mmol) in THF (8 mL) was added triphosgene (100 mg, 0.34 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (EA) to give title product (70 mg, Y: 40.0%) as a white solid. ESI-MS (M+H) +: 523.2.1H NMR (400 MHz, DMSO-d6)δ 12.15 (s, 1H), 8.67 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 6.92 (s, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.05 – 4.04 (m, 2H), 3.97 (s, 3H), 3.93 – 3.92 (m, 2H), 3.71 – 3.53 (m, 2H), 3.22 – 3.01 (m, 4H), 2.98 – 2.86 (m, 1H), 1.42 (s, 9H), 1.21 – 1.16 (m, 3H). Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [0993] A mixture of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (60 mg, 0.11 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (24 mg, Y: 49.5 %) as a yellow solid. ESI-MS (M+H) +: 423.1.1H NMR (400 MHz, DMSO-d6) δ 12.17 (s, 1H), 8.67 (s, 1H), 8.23 (s, 1H), 8.14 (s, 1H), 7.94 (d, J = 6.0 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.05 (s, 3H), 4.01 – 3.96 (m, 2H), 3.65 – 3.58 (m, 2H), 3.12 (t, J = 8.5 Hz, 2H), 3.04 – 2.97 (m, 1H), 2.93 – 2.79 (m, 3H), 2.61 – 2.53 (m, 1H), 1.07 (d, J = 6.3 Hz, 3H). Example 362 – Preparation of (R)-N-(6-hydroxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000521_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [0994] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (74 mg, 0.23 mmol) in THF (5 mL) were added TEA (71 mg, 0.70 mmol), triphosgene (83 mg, 0.28 mmol) at 0oC. The mixture was stirred at r.t for 1 h.6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (50 mg, 0.28 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:2) to give the title compound (30 mg, Y: 25.5 %) as a yellow solid. ESI-MS (M+H) +:523.3.1H NMR (400 MHz, DMSO-d6) δ 11.98 (s, 1H), 8.42 (s, 1H), 8.24 (s, 1H), 7.93 (d, J = 5.9 Hz, 1H), 6.54 (d, J = 5.9 Hz, 1H), 6.17 (s, 1H), 3.82 – 3.75 (m, 2H), 3.69 – 3.64 (m, 2H), 3.63 – 3.57 (m, 2H), 3.11 – 3.06 (m, 2H), 2.99 – 2.91 (m, 3H), 2.35 (s, 3H), 2.32 (s, 3H), 1.43 (s, 9H), 1.19 (d, J = 6.6 Hz, 3H). Step 2: Preparation of (R)-N-(6-hydroxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [0995] To a solution of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (2 mL). The reaction mixture was stirred at r.t for 2 h and concentrated in vacuo.The crude was purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (10.1 mg, 32.6 %) as a white solid. ESI-MS (M+H)+:423.3.1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 9.00 (s, 1H), 8.74 – 8.62 (m, 2H), 8.15 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 4.07 (s, 3H), 4.05 (s, 3H), 4.03 – 4.01 (m, 2H), 3.79 (d, J = 12.3 Hz, 2H), 3.41 – 3.35 (m, 2H), 3.19 – 3.12 (m, 4H), 2.97 (dd, J = 13.7, 10.5 Hz, 1H), 1.27 (d, J = 6.4 Hz, 3H).
Example 363 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- 2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000523_0001
Step 1: Preparation of 6-chloro-2-methyl-2H-pyrazolo[3,4-b]pyridine. [0996] To a mixture of 6-chloro-2H-pyrazolo[3,4-b]pyridine (23.0 g, 149.35 mmol) in EA (250 mL) was added trimethyloxonium tetrafluoroborate (26.5 g, 179.22 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with Saturated sodium bicarbonate aqueous solution (200 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo to get title product (17.0 g, Y: 67.8%) as a brown solid. ESI-MS (M+H)+: 168.1.1H NMR (400 MHz, DMSO-d6) δ 8.49 (s, 1H), 8.27 (d, J = 8.6 Hz, 1H), 7.12 (d, J = 8.6 Hz, 1H), 4.20 (s, 3H). Step 2: Preparation of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine. [0997] To a mixture of 6-chloro-2-methyl-2H-pyrazolo[3,4-b]pyridine (16 g, 95.24 mmol) in MeOH (200 mL) was added NaOMe (6.2 g, 114.29 mmol). The mixture was stirred at 70 oC for 16 h. The mixture was concentrated in vacuo and diluted with water (300 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo to get title product (14.4 g, Y: 92.8%) as a yellow solid. ESI-MS (M+H)+: 164.2. Step 3: Preparation of 5-bromo-6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine. [0998] To a mixture of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine (13.4 g, 82.21 mmol) in ACN (200 mL) was added NBS (17.6 g, 98.65 mmol). The mixture was stirred at 55 oC for 16 h. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3). The combined organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=10:1) to give the title compound (14.0 g, Y: 70.4 %) as a yellow solid. ESI-MS (M+H) +:244.0.1H NMR (400 MHz, DMSO-d6) δ 8.43 (s, 1H), 8.26 (s, 1H), 4.12 (s, 3H), 3.99 (s, 3H). Step 4: Preparation of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-1,1- diphenylmethanimine. [0999] To a mixture of 5-bromo-6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine (14.0 g, 57.85 mmol) in 1,4-dioxane (200 mL) were added diphenylmethanimine (15.7 g, 86.78 mmol), BINAP (7.2 g, 11.57 mmol), Pd(OAc)2 (1.3 g, 5.79 mmol) and Cs2CO3 (37.7 g, 115.70 mmol). The mixture was stirred at 110oC for 16 h under N2. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 1) to get title product (1.0 g, Y: 5.1%) as a yellow solid. ESI-MS (M+H)+:343.0.1H NMR (400 MHz, DMSO-d6) δ 8.20 (s, 1H), 8.07 (s, 1H), 7.39 – 7.36 (m, 4H), 7.33 – 7.32 (m, 1H), 7.32 – 7.31 (m, 2H), 7.30 – 7.29 (m, 1H), 7.28 – 7.25 (m, 2H), 4.36 (s, 3H), 3.33 (s, 3H). Step 5: Preparation of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine HCl salt. [01000] To a mixture of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-1,1- diphenylmethanimine (900 mg, 2.63 mmol) in EA (10 mL) was added 4 M HCl/EA (10 mL). The mixture was stirred at r.t for 2 h. The mixture was filtered and the residue was diluted with EA (10 mL). The mixture was stirred at r.t for 2 h and the precipitate was filtered to get title product (400 mg, Y: 85.4%) as a yellow solid. ESI-MS (M+H)+:179.5. Step 6: Preparation of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01001] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (78 mg, 0.23 mmol) in THF (3 mL) were added TEA (71 mg, 0.70 mmol), triphosgene (83 mg, 0.28 mmol) at 0oC. The mixture was stirred at r.t for 1 h.6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (50 mg, 0.28 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:2) to give the title compound (30 mg, Y: 23.8 %) as a yellow solid. ESI-MS (M+H) +:537.4.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 9.36 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.19 (s, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.07 – 4.07 (m, 2H), 4.01 (t, J = 8.5 Hz, 2H), 3.91 (s, 6H), 3.65 – 3.56 (m, 2H), 3.18 – 3.14 (m, 2H), 2.97 – 2.86 (m, 2H), 2.31 (s, 6H), 1.42 (s, 9H). Step 7: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01002] To a solution of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (30 mg, 0.06 mmol) in DCM (1 mL) was added TFA (1 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (12 mg, 31.7 %) as a white solid. ESI-MS (M+H)+:437.3. 1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 8.91 (s, 2H), 8.67 (s, 1H), 8.15 (s, 1H), 8.02 (d, J = 6.0 Hz, 1H), 6.62 (d, J = 6.1 Hz, 1H), 4.07 (s, 3H), 4.05 (s, 3H), 4.03 – 4.00 (m, 2H), 3.47 – 3.44 (m, 2H), 3.32 – 3.28 (m, 4H), 3.16 (t, J = 8.6 Hz, 2H), 1.38 (s, 6H).
Example 364 – Preparation of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)- 4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate.
Figure imgf000526_0001
Step 1: Preparation of phenyl (6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamate. [01003] To a mixture of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (10.2 g, 57.00 mmol) and pyridine (13.5 g, 170.95 mmol) in DCM (200 mL) was added phenyl carbonochloridate (13.42 g, 85.47 mmol) at 0oC. The mixture was stirred at RT for 1 h. The mixture was concentrated in vacuo and diluted with 1M NaOH (100 mL), the precipitate was filtered and dried in vacuo to give title product (18.9 g, crude) as a yellow solid. ESI-MS (M+H) +: 299.2. Step 2: Preparation of tert-butyl 7-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01004] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (11 g, 33.33 mmol), phenyl (6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)carbamate (11 g, 47.00 mmol) and TEA (10.1 g, 100.00 mmol) in THF (200 mL) was stirred at 70 oC for 16 h. The mixture was diluted with H2O (200 mL), extracted with DCM (200 mL x3), organic layer concentrated in vacuo and diluted with (MeOH:EA=3:1, 300mL), stirred at r.t for 1h, the precipitae was filtered and dried in vacuo to give title product (17 g, Y:98.3%) as a white solid. ESI-MS (M+H) +: 535.4. Step 3: Preparation of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01005] A mixture of tert-butyl 7-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (14 g, 26.17 mmol) in EA (100 mL) was added 4M HCl/EA (100 mL). The reaction mixture was stirred at r.t for 0.5 h. The mixture was diluted with 2M NaOH (200 mL), the precipitate was filtered, washed with water (100 mL *3) and dried to give title product (10 g, Y:87.9 %) as a white solid. ESI-MS (M+H) +: 435.2. Step 4: Preparation of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate. [01006] A mixture of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (20 g, 45.98 mmol) and benzoate (5.61 g, 45.98 mmol) in DCM / MeOH (200 mL / 200 mL) was stirred at 50 oC for 16 h. The mixture was concentrated in vacuo, the residue was triturated with MTBE (200 mL) and lyophilized to give title product (22 g, Y: 85.9 %) as a white solid. ESI-MS (M+H) +: 435.0.1H NMR (400 MHz, DMSO-d6) δ 12.18 (s, 1H), 8.66 (s, 1H), 8.14 (s, 1H), 7.94 (t, J = 6.8 Hz, 3H), 7.62 (t, J = 7.4 Hz, 1H), 7.50 (t, J = 7.7 Hz, 2H), 6.49 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.05 (s, 3H), 3.97 (t, J = 8.5 Hz, 2H), 3.25 – 3.23 (m, 2H), 3.11 – 3.04 (m, 4H), 2.91 – 2.84 (m, 2H), 0.55 – 0.47 (m, 4H).
Example 365 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methyltetrazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000528_0001
t 4
Figure imgf000528_0002
Step 1: Preparation of 5-bromo-2-hydrazinyl-4-methylpyridine. [01007] To a mixture of 5-bromo-2-chloro-4-methylpyridine (20.0 g, 97.09mmol) in EtOH (200 mL) was added N2H4.H2O (34.0 g, 679.61 mmol). The mixture was stirred at 120oC for 16 h. The reaction mixture was concentrated in vacuo and the residue was diluted with water (200 mL) and extracted with EA (200 mLx3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 10: 1 to 1: 5) to get title product (18 g, Y: 91.8%) as a yellow solid. ESI-MS (M+H)+:204.4.1H NMR (400 MHz, DMSO-d6) δ 8.00 (s, 1H), 7.53 (s, 1H), 6.71 (s, 1H), 4.13 (s, 2H), 2.23 (s, 3H). Step 2: Preparation of 6-bromo-7-methyltetrazolo[1,5-a]pyridine. [01008] A solution of NaNO2 (7.4 g, 106.93 mmol) in H2O (10 mL) was added to a mixture of 5-bromo-2-hydrazineyl-4-methylpyridine (18.0 g, 99.01 mmol) in AcOH (200 mL) at 0oC. The mixture was stirred at 0oC for 3 h. The mixture was diluted with sodium carbonate solution (100 mL) and stirred at r.t for 2 h. The mixture was extracted with EA (100 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 1) to get title product (14 g, Y: 73.87%) as a yellow solid. ESI-MS (M+H)+:213.4.1H NMR (400 MHz, DMSO-d6) δ 9.79 (s, 1H), 8.23 (s, 1H), 2.52 (s, 3H). Step 3: Preparation of N-(7-methyltetrazolo[1,5-a]pyridin-6-yl)-1,1-diphenylmethanimine. [01009] To a mixture of 6-bromo-7-methyltetrazolo[1,5-a]pyridine (13.8 g, 65.00 mmol) in 1,4-dioxane (150 mL) were added diphenylmethanimine (17.6 g, 97.51 mmol), BINAP (8.1 g, 13.00 mmol), Pd(OAc)2 (1.5 g, 6.50 mmol) and Cs2CO3 (43.4 g, 130.01 mmol). The mixture was stirred at 90oC for 16 h under N2. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 1) to get title product (3.0 g, Y: 14.8 %) as a yellow solid. ESI-MS (M+H)+: 314.4.1H NMR (400 MHz, DMSO-d6) δ 8.58 (s, 1H), 8.03 (s, 1H), 7.78 – 7.75 (m, 2H), 7.64 – 7.60 (m, 1H), 7.56 – 7.51 (m, 2H), 7.37 – 7.30 (m, 5H), 2.39 (s, 3H). Step 4: Preparation of 7-methyltetrazolo[1,5-a]pyridin-6-amine HCl salt. [01010] To a mixture of N-(7-methyltetrazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (3.0 g, 9.58 mmol) in EA (30 mL) was added 4 M HCl/EA (30 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered and diluted with EA (10 mL). The mixture was stirred at r.t for 2 h and filtered to get title product (1.4 g, Y: 98.0%) as a yellow solid. ESI-MS (M+H)+: 150.2. Step 5: Preparation of tert-butyl 2,2-dimethyl-4-(1-((7-methyltetrazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01011] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) in THF (5 mL) were added TEA (137 mg, 1.36 mmol), triphosgene (161 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 1 h.7-methyltetrazolo[1,5-a]pyridin-6-amine (101 mg, 0.54 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (60 mg, Y: 26.1 %) as a yellow solid. ESI-MS (M+H) +: 508.3. Step 6: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methyltetrazolo[1,5-a]pyridin-6- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01012] To a solution of tert-butyl 2,2-dimethyl-4-(1-((7-methyltetrazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (2 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (5.7 mg, 11.1 %) as a white solid. ESI- MS (M+H)+:408.3.1H NMR (400 MHz, DMSO-d6) δ 9.76 (s, 1H), 8.11 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.61 (d, J = 6.2 Hz, 1H), 4.05 (t, J = 8.5 Hz, 2H), 3.47 (s, 2H), 3.30 (s, 4H), 3.17 (t, J = 8.4 Hz, 2H), 2.59 (s, 3H), 1.38 (s, 6H). Example 366 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000530_0001
Step 1: Preparation of 6-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidine. [01013] To a mixture of 3-methyl-1H-1,2,4-triazol-5-amine (4.0 g, 40.82 mmol) in AcOH (40 mL) was added 2- bromomalonaldehyde (6.8 g, 44.90 mmol). The mixture was stirred at 60oC for 16 h under N2. The mixture was concentrated in vacuo. The residue was dissolved in EA (50 mL) and filtered. The filtrate was diluted with NaHCO3 (100 mL), and the aqueous layer was extracted with EA (100 mLx3). The combined organic layer was dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by column chromatography (DCM: MeOH= 100: 0 to DCM: MeOH= 98:2) to get title product (7.0 g, Y: 80.5%) as a white solid. ESI-MS (M+H)+: 215.0.1H NMR (400 MHz, DMSO-d6) δ 9.73 (d, J = 2.3 Hz, 1H), 8.87 (d, J = 2.3 Hz, 1H), 2.48 (s, 3H). Step 2: Preparation of N-(2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-1,1- diphenylmethanimine. [01014] To a mixture of 6-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidine (5.3 g, 24.88 mmol) in 1,4-dioxane (50 mL) were added diphenylmethanimine (6.8 g, 37.32 mmol), BINAP (3.1 g, 4.98 mmol), Pd(OAc)2 (560 mg, 2.49 mmol) and Cs2CO3 (16.2 g, 49.77 mmol). The mixture was stirred at 115 oC for 16 h under N2. The mixture was diluted with water (100 mL) and extracted with EA (100 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 3) to get title product (1.0 g, Y: 12.8%) as a yellow solid. ESI-MS (M+H)+: 314.2.1H NMR (400 MHz, DMSO-d6) δ 8.83 (d, J = 2.6 Hz, 1H), 8.36 (d, J = 2.6 Hz, 1H), 7.76 – 7.73 (m, 2H), 7.63 – 7.59 (m, 1H), 7.55 – 7.51 (m, 2H), 7.41 – 7.38 (m, 3H), 7.31 – 7.28 (m, 2H), 2.43 (s, 3H). Step 3: Preparation of 2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-amine HCl salt. [01015] To a mixture of N-(2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-1,1- diphenylmethanimine (900 mg, 2.88 mmol) in EA (10 mL) was added 4 M HCl/EA (10 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered and diluted with EA (10 mL). The mixture was stirred at r.t for 2 h and filtered to get title product (300 mg, Y: 70.0%) as a white solid. ESI-MS (M+H)+: 150.2.1H NMR (400 MHz, DMSO-d6) δ 8.05 (d, J = 0.9 Hz, 1H), 7.48 (s, 1H), 5.63 – 5.48 (m, 2H), 4.09 (s, 3H), 2.42 (d, J = 0.7 Hz, 3H). Step 4: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01016] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) in THF (5 mL) were added TEA (137 mg, 1.36 mmol), triphosgene (161 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 1 h.8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-amine hydrochloride (101 mg, 0.54 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and extracted with EA (20 mL*3). The combined organic layer was washed with brine (30 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (DCM/MeOH=10:1) to give the title compound (50 mg, Y: 21.8 %) as a yellow solid. ESI-MS (M+H) +: 508.3. Step 5: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01017] To a solution of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (1 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (14 mg, 27.3 %) as a white solid. ESI-MS (M+H)+: 408.3.1H NMR (400 MHz, DMSO-d6) δ 11.97 (s, 1H), 9.52 (d, J = 2.6 Hz, 1H), 9.00 (s, 2H), 8.91 (d, J = 2.6 Hz, 1H), 7.98 (d, J = 6.1 Hz, 1H), 6.67 (d, J = 6.1 Hz, 1H), 4.05 (t, J = 8.5 Hz, 2H), 3.52 – 3.47 (m, 2H), 3.35 – 3.29 (m, 4H), 3.21 (t, J = 8.4 Hz, 2H), 2.49 (s, 3H), 1.37 (s, 6H). Example 367 – Preparation of (S)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000532_0001
Compound 367 Step 1: Preparation of tert-butyl 4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01018] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) in THF (5 mL) were added TEA (137 mg, 1.36 mmol), triphosgene (161 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 1 h.7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-amine (107 mg, 0.54 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and extracted with EA (20 mL*3). The combined organic layer was washed with brine (30 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:2) to give the title compound (60 mg, Y: 23.9 %) as a yellow solid. ESI-MS (M+H) +:556.3. Step 2: Preparation of (S)-N-(2,6-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01019] To a solution of tert-butyl 4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in DCM (2 mL) was added TFA (2 mL). The reaction mixture was stirred at r.t for 2 h and concentrated in vacuo. The crude was purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (18.08 mg, 35.1 %) as a white solid. ESI-MS (M+H)+: 456.3.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.59 (s, 1H), 9.06 (s, 2H), 8.24 (s, 1H), 8.12 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.36 (t, J = 53.6 Hz, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.05 (t, J = 8.4 Hz, 2H), 3.52 – 3.47 (m, 2H), 3.33 (s, 2H), 3.32 – 3.27 (m, 2H), 3.21 (t, J = 8.3 Hz, 2H), 2.50 (s, 3H), 1.37 (s, 6H). Example 368 – Preparation of (R)-4-(3-cyclopropylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000533_0001
Step 1: Preparation of tert-butyl 2-cyclopropyl-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [01020] A mixture of tert-butyl 2-cyclopropylpiperazine-1-carboxylate (954 mg, 4.18 mmol), 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (708.3 mg, 4.6 mmol) in a sealed tube was stirred at 140 oC for 16 h. the mixture was diluted with water (20 mL), extracted with EA (20 mL×3). The organic layer was washed with brine (20 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (MeOH: DCM= 6 %) to give title product (1 g, yield: 69.54 %) as a yellow solid. ESI-MS (M+H) +: 345.1.1H NMR (400 MHz, CDCl3) δ 7.72 (d, J = 5.9 Hz, 1H), 6.12 (d, J = 6.0 Hz, 1H), 4.05 (d, J = 13.0 Hz, 1H), 3.64 – 3.55 (m, 3H), 3.52 – 3.47 (m, 1H), 3.40 – 3.30 (m, 2H), 3.12 – 3.07 (m, 2H), 2.92 – 2.85 (m, 2H), 1.47 (s, 9H), 0.61 – 0.49 (m, 4H), 0.32 – 0.27 (m, 1H). Step 2: Preparation of tert-butyl (R)-2-cyclopropyl-4-(1-((7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01021] A mixture of tert-butyl 2-cyclopropyl-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate (400 mg, 1.16 mol), 7-fluoro-2-methylimidazo[1,2- a]pyridin-6-amine (239 mg, 1.45 mmol), triphosgene (417 mg, 1.45 mmol) and TEA (1.47 g, 14.53 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O and the precipitate was filtered and triturated with MeOD afford racemic product (280 mg, 45%) as a white solid. Then purified by SFC n- Hexane / IPA(0.2 % DEA) to give title product (170 mg) as a yellow solid and tert-butyl (S)- 2-cyclopropyl-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (110 mg) as a yellow solid. ESI-MS (M+H) +: 536.4. Step 3: Preparation of (R)-4-(3-cyclopropylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01022] A mixture of tert-butyl (R)-2-cyclopropyl-4-(1-((7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (170 mg, 0.32 mmol) in 3M HCl /EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (99.38 mg, yield: 41.38 %) as a white solid. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 12.41 (s, 1H), 9.85 (s, 1H), 9.60 (d, J = 43.7 Hz, 2H), 8.17 (s, 1H), 8.07 (d, J = 9.9 Hz, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.68 (d, J = 5.9 Hz, 1H), 4.06 (s, 2H), 3.86 – 3.77 (m, 2H), 3.42 – 3.29 (m, 3H), 3.24 – 3.15 (m, 2H), 3.08 – 2.98 (m, 1H), 2.68 – 2.58 (m, 1H), 2.46 (s, 3H), 1.14 – 1.06 (m, 1H), 0.62 (d, J = 7.1 Hz, 3H), 0.53 – 0.46 (m, 1H). Example 369 – Preparation of (S)-4-(3-cyclopropylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000535_0001
Step 1: Preparation of (S)-4-(3-cyclopropylpiperazin-1-yl)-N-(7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01023] A mixture of tert-butyl (S)-2-cyclopropyl-4-(1-((7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (110 mg, 0.21 mmol) in 3M HCl /EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (75.2 mg, yield: 77.50 %) as a white solid. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 12.39 (s, 1H), 9.94 (s, 1H), 9.62 (d, J = 12.3 Hz, 2H), 8.17 (s, 1H), 8.06 (d, J = 9.9 Hz, 1H), 7.94 (d, J = 6.1 Hz, 1H), 6.68 (d, J = 5.6 Hz, 1H), 4.10 – 4.00 (m, 2H), 3.89 – 3.78 (m, 2H), 3.45 – 3.30 (m, 3H), 3.25 – 3.14 (m, 2H), 3.08 – 2.98 (m, 1H), 2.66 – 2.57 (m, 1H), 2.46 (s, 3H), 1.15 – 1.07 (m, 1H), 0.66 – 0.58 (m, 3H), 0.53 – 0.45 (m, 1H).
Example 370 – Preparation of (S)-4-(3-methylpiperazin-1-yl)-N-(6-methyl pyrazolo[1,5- a]pyrazin-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate.
Figure imgf000536_0001
Step 1: Preparation of ethyl 6-methylpyrazolo[1,5-a]pyrazine-2-carboxylate. [01024] To a mixture of ethyl 4-chloro-6-methylpyrazolo[1,5-a]pyrazine-2-carboxylate (1.5 g, 6.28 mmol) in DMF (20 mL) was added HCOONa (640 mg, 9.41 mmol), Pd(PPh3)4 (363 mg, 0.31 mmol). The mixture was stirred at 120 o C for 4 h. The mixture was diluted with water (20 mL) and extracted with EA (20 mL× 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The crude was purified by silica gel column chromatography (PE/EA= 3:1) to afford title product (1 g, Y: 77 %) as a yellow solid. ESI-MS (M+H) +: 206.1.1H NMR (400 MHz, CDCl3) δ 9.07 (d, J = 1.3 Hz, 1H), 8.26 (d, J = 1.0 Hz, 1H), 7.30 (d, J = 0.8 Hz, 1H), 4.49 (q, J = 7.1 Hz, 2H), 2.57 (d, J = 0.8 Hz, 3H), 1.46 (t, J = 7.1 Hz, 3H). Step 2: Preparation of 6-methylpyrazolo[1,5-a]pyrazine-2-carboxylic acid. [01025] To a mixture of ethyl 6-methylpyrazolo[1,5-a]pyrazine-2-carboxylate (1 g, 4.88 mmol) in THF (10 mL) and water (10 mL) was added LiOH (234 mg, 9.76 mmol). The mixture was stirred at r.t for 2 h. Vacuum concentration of reaction liquild to remove THF. The aqueous phase was added 1 M HCl to PH=5. The precipitate was filtered and dried to give title product (200 mg, 23%) as a white solid. ESI-MS (M+H) +: 178.1.1H NMR (400 MHz, DMSO-d6) δ 9.19 (s, 1H), 8.68 (s, 1H), 7.33 (s, 1H), 2.48 (s, 3H). Step 3: Preparation of tert-butyl (S)-2-methyl-4-(1-((6-methylpyrazolo[1,5-a]pyrazin-2- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01026] To a solution of 6-methylpyrazolo[1,5-a]pyrazine-2-carboxylic acid (56 mg, 0.31 mmol) in toluene (10 mL) were added TEA (125 mg, 1.24 mmol), DPPA (256 mg, 0.93 mmol). The mixture was stirred at r.t for 1 h and 1 h at 70 oC. Then tert-butyl (S)-4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methyl piperazine-1-carboxylate (100 mg, 0.31 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (10 mL) and extracted with EA (10 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:4) to give title product (80 mg, yield: 52 %) as a white solid. ESI-MS (M+H) +:493.3.1H NMR (400 MHz, CDCl3) δ 12.41 (s, 1H), 8.84 (d, J = 1.2 Hz, 1H), 8.07 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 7.12 (s, 1H), 6.36 (d, J = 6.1 Hz, 1H), 4.35 – 4.34 (m, 1H), 4.19 – 4.18 (m, 2H), 3.96 (d, J = 13.5 Hz, 1H), 3.52 (d, J = 12.2 Hz, 1H), 3.43 (d, J = 12.1 Hz, 1H), 3.27 – 3.19 (m, 1H), 3.16 – 3.05 (m, 3H), 2.95 – 2.94 (m, 1H), 2.51 (s, 3H), 1.49 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). Step 4: Preparation of (S)-4-(3-methylpiperazin-1-yl)-N-(6-methylpyrazolo[1,5-a]pyrazin-2- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01027] To a solution of tert-butyl (S)-2-methyl-4-(1-((6-methylpyrazolo[1,5- a]pyrazin-2-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (60 mg, 0.12 mmol) in EA (5 mL) was added 4M HCl / EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (42.29 mg, 81%) as a white solid. ESI-MS (M+H) +:392.9.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 8.97 (d, J = 1.2 Hz, 1H), 8.47 (s, 1H), 8.19 (s, 2H), 7.94 (d, J = 6.1 Hz, 1H), 7.00 (s, 1H), 6.55 (d, J = 6.2 Hz, 1H), 4.01 (t, J = 8.6 Hz, 2H), 3.65 – 3.61 (m, 2H), 3.14 (t, J = 8.5 Hz, 2H), 3.03 – 2.98 (m, 1H), 2.90 – 2.79 (m, 3H), 2.61 – 2.55 (m, 1H), 2.43 (s, 3H), 1.06 (d, J = 6.3 Hz, 3H). Example 371 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000538_0001
Step 1: Preparation of tert-butyl 3-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01028] To a solution of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (100 mg, 0.49 mmol) in Toluene (10 mL) were added TEA (147.09 mg, 1.46 mmol) and DPPA (269.50 mg, 0.98 mmol). The mixture was stirred at rt for 1h. Then the mixture was stirred at 60 oC for another 1h. tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (161.70 mg, 0.49 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:3) to provide title product (40 mg, crude) as a white solid. ESI-MS (M+H)+: 534.3. Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01029] A solution of tert-butyl 3-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (40 mg, 0.08 mmol) in 4M HCl/EA (5 mL) stirred at rt for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (3.0 mg, 7.81 %) as a white solid. ESI-MS (M+H+): 433.9.1H NMR (400 MHz, MeOD-d4) δ 8.50 (s, 1H), 8.24 (s, 1H), 7.99 (s, 1H), 7.96 (d, J = 5.9 Hz, 1H), 6.50 (d, J = 6.0 Hz, 1H), 6.13 (s, 1H), 4.10 – 4.08 (m, 2H), 4.07 – 4.02 (m, 2H), 3.98 (s, 3H), 3.69 – 3.64 (m, 2H), 3.28 – 3.24 (m, 2H), 3.18 – 3.13 (m, 2H), 2.37 (s, 3H), 2.15 – 2.09 (m, 4H). Example 372 – Preparation of 4-(4-(2,2-difluoroacetyl)-3,3-dimethylpiperazin-1-yl)-N- (7-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine- 1-carboxamide.
Figure imgf000539_0001
Step 1: Preparation of 4-(4-(2,2-difluoroacetyl)-3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. [01030] A mixture of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide (200 mg, 0.47 mmol) and DMAP (144 mg,1.18 mmol) in DAF (10 mL) was stirred at 80 oC for 16 h. The reaction mixture was diluted with H2O (20 mL) and extracted with DCM (20 mL*3). The organic layer was washed bine and concentrated in vacuo. The crude product was purified by silica gel column chromatography (PE: EA = 2:1) to give title compound (42.08 mg, Y: 17.0%) as a yellow solid. ESI-MS (M+H) +: 502.1.1H NMR (400 MHz, DMSO-d6) δ 12.14 (s, 1H), 9.52 – 9.08 (m, 1H), 8.26 – 7.73 (m, 2H), 7.44 (d, J = 25.0 Hz, 1H), 6.67 (t, J = 52.9 Hz, 1H), 6.40 (s, 1H), 3.97 (s, 2H), 3.80 (s, 2H), 3.63 – 3.62 (m, 4H), 3.32 – 3.30 (m, 2 H), 2.30 (s, 3H), 1.46 (s, 6H).
Example 373 – Preparation of 4-(3,9-diazabicyclo[3.3.1]nonan-3-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000540_0001
Step 1: Preparation of methyl 5-methoxy-2-(prop-1-yn-1-yl)isonicotinate. [01031] To a solution of methyl 2-bromo-5-methoxyisonicotinate (13 g, 52.84 mmol), trimethyl(prop-1-yn-1-yl)silane (21 g, 184.96 mmol) in toluene (500 mL) were added Pd(PPh3)4 (6 g, 5.28 mmol), CuI (3 g, 15.86 mmol), TEA (31.8 g, 314.52 mmol), TBAF (14 g, 52.84 mmol), The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo. The mixture was diluted with water (300 mL) and extracted with EA (300 mL× 3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo. The crude was purified by silica gel column chromatography (PE/EA= 4:1) to afford title product (9.5 g, Y: 87 %) as a yellow solid. ESI-MS (M+H) +: 206.1. Step 2 and step 3: Preparation of methyl 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5- carboxylate. [01032] To a mixture of methyl 5-methoxy-2-(prop-1-yn-1-yl)isonicotinate (9.5 g, 46.12 mmol) in trichloromethane (300 mL) was added and O-(mesitylsulfonyl) hydroxylamine (30 g, 138.34 mmol) in 0oC. The mixture was stirred at r.t for 16 h. The reaction mixture was concentrated in vacuo, the residue was diluted with DMF (300 mL), K2CO3 (11.4 g, 83.01 mmol) was added and stirred at r.t for 5 h. The crude was diluted with water (300 mL) and extracted with EA (300 mL ×3). The organic layer was washed with brine, dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA= 3:1) to give title product (2.5 g, Y: 24 %) as a yellow solid. ESI-MS (M+H) +: 221.1.1H NMR (400 MHz, CDCl3) δ 8.05 (s, 1H), 7.95 (s, 1H), 6.38 (s, 1H), 3.92 (s, 3H), 3.89 (s, 3H), 2.47 (s, 3H). Step 4: Preparation of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid. [01033] To a mixture of methyl 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5- carboxylate (500 mg, 2.26 mmol) in THF (5 mL) and water (5 mL) was added LiOH (109 mg, 4.50 mmol). The mixture was stirred at r.t for 2 h. The mixture was concentrated to remove most of THF. The aqueous phase was adjusted PH=5 with 1 M HCl. The mixture was filtered through a Celite pad and collect solid to give title product (200 mg, 42%) as a yellow solid. ESI-MS (M+H) +: 207.5.1H NMR (400 MHz, DMSO-d6) δ 8.40 (s, 1H), 7.90 (s, 1H), 6.51 (s, 1H), 3.87 (s, 3H), 2.43 (s, 3H). Step 5: Preparation of tert-butyl 3-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9-diazabicyclo[3.3.1]nonane-9- carboxylate. [01034] To a solution of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (60 mg, 0.29 mmol) in toluene (20 mL) were added TEA (117 mg, 1.16 mmol), DPPA (239 mg, 0.87 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. Then tert- butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9-diazabicyclo[3.3.1]nonane-9- carboxylate (100 mg, 0.29 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=2:1) to give title product (50 mg, yield: 31 %) as a white solid. ESI-MS (M+H) +:548.3.1H NMR (400 MHz, CDCl3) δ 12.16 (s, 1H), 8.29 (s, 1H), 7.89 (s, 1H), 7.85 (d, J = 5.5 Hz, 1H), 6.25 (d, J = 6.1 Hz, 1H), 6.04 (s, 1H), 4.10 (dd, J = 17.5, 8.9 Hz, 4H), 3.88 (s, 3H), 3.58 – 3.52 (m, 2H), 3.18 – 3.10 (m, 4H), 2.35 (s, 3H), 1.88 – 1.81 (m, 2H), 1.76 – 1.64 (m, 4H), 1.43 (s, 9H). Step 6: Preparation of 4-(3,9-diazabicyclo[3.3.1]nonan-3-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. To a solution of tert-butyl 3-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,9-diazabicyclo[3.3.1]nonane-9- carboxylate (40 mg, 0.072 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). [01035] The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (9 mg, 26%) as a white solid. ESI-MS (M+H) +:448.2.1H NMR (400 MHz, MeOD-d4) δ 8.51 (s, 1H), 8.27 (s, 1H), 8.05 – 7.99 (m, 2H), 6.55 (d, J = 6.0 Hz, 1H), 6.16 (s, 1H), 4.15 – 4.09 (m, 2H), 4.01 (s, 3H), 3.94 (d, J = 13.0 Hz, 2H), 3.64 (s, 2H), 3.44 (d, J = 11.8 Hz, 2H), 3.28 – 3.23 (m, 2H), 2.61 – 2.48 (m, 1H), 2.38 (s, 3H), 2.13 (d, J = 7.6 Hz, 4H), 1.69 (d, J = 13.5 Hz, 1H). Example 374 – Preparation of (R)-N-(7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide
Figure imgf000542_0001
Step 1: Preparation of tert-butyl (R)-2-methyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01036] To a solution of 7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (67 mg, 0.45 mmol) and TEA (0.63 mL, 4.52 mmol) in THF (8 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.38 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (30 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (90 mg, 48.48 %) as a white solid. ESI- MS (M+H) +: 493.2. Step 2: Preparation of (R)-N-(7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01037] To a mixture of tert-butyl (R)-2-methyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (80 mg, 0.16 mmol) in EA (1 mL) was added HCl/EA(3 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with MeOH (8 mL), then filtered and lyophilized to give title product (70 mg, 89.41 %) as an off-white solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 9.52 (s, 3H), 8.50 (s, 1H), 7.96 – 7.95 (m, 1H), 7.82 (s, 1H), 6.70 – 6.69 (m, 1H), 4.12 – 4.07 (m, 3H), 3.43 – 3.29 (m, 4H), 3.27 – 3.18 (m, 2H), 3.16 – 3.06 (m, 2H), 2.53 (s, 3H), 1.31 (d, J = 6.4 Hz, 3H). Example 375 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000543_0001
Step 1: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01038] To a solution of 7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (58.83 mg, 0.40 mmol) and TEA (0.55 mL, 3.97 mmol) in THF (8 mL) was added triphosgene (117 mg, 0.40 mmol) at 0oC, after 10 min, tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2,6-dimethylpiperazine-1-carboxylate (120 mg, 0.36 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (30 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (70 mg, 38.28 %) as a white solid. ESI-MS (M+H) +: 507.2. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01039] To a mixture of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((7-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (60 mg, 0.12 mmol) in EA (1mL) was added HCl/EA(3 mL, 4M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with MeOH (8 mL), then filtered and lyophilized to give title product (50 mg, 82.09 %) as an off- white solid. ESI-MS (M+H) +: 407.1.1H NMR (400 MHz, DMSO-d6) δ 12.02 (s, 1H), 9.52 (s, 2H), 9.06 (s, 1H), 8.46 – 8.45 (m, 1H), 7.96 (s, 1H), 7.81 (s, 1H), 6.70 – 6.69 (m, 1H), 4.13 – 4.02 (m, 2H), 3.93 – 3.87 (m, 2H), 3.38 – 3.31 (m, 2H), 3.29 – 3.17 (m, 2H), 3.08 – 2.96 (m, 2H), 2.53 (s, 3H), 1.31 (d, J = 6.5 Hz, 6H). Example 376 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000544_0001
Step 1: Preparation of tert-butyl 2,2-dimethyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01040] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (120 mg, 0.36 mol), 7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine (64.2 mg, 0.43 mmol), triphosgene (127.7 mg, 0.43 mmol) and TEA (438.3 mg, 4.34 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at rt for 1h. The precipitate was filtered to afford title product (80 mg, 43.83 %) as a white solid. ESI-MS (M+H) +: 507.2.1H NMR (400 MHz, CDCl3) δ 12.05 (s, 1H), 9.64 (s, 1H), 8.24 (s, 1H), 7.82 (d, J = 6.1 Hz, 1H), 7.53 (s, 1H), 6.23 (d, J = 6.1 Hz, 1H), 4.20 – 4.13 (m, 2H), 3.82 – 3.79 (m, 2H), 3.60 – 3.56 (m, 2H), 3.47 (s, 2H), 3.31 – 3.25 (m, 2H), 2.56 (s, 3H), 1.51 (s, 9H), 1.46 (s, 6H). Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01041] A mixture of tert-butyl 2,2-dimethyl-4-(1-((7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (80 mg, 0.16 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (72.56 mg, yield: 87.21 %) as a yellow solid. ESI-MS (M+H) +: 407.1.1H NMR (400 MHz, DMSO-d6) δ 11.90 (s, 1H), 9.49 (s, 1H), 8.94 (s, 2H), 8.41 (s, 1H), 7.98 (d, J = 6.2 Hz, 1H), 7.79 (s, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.05 (d, J = 8.8 Hz, 2H), 3.52 – 3.48 (m, 2H), 3.34 – 3.30 (m, 4H), 3.23 – 3.19 (m, 2H), 2.53 (s, 3H), 1.37 (s, 6H). Example 377 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000545_0001
Step 1: Preparation of tert-butyl 3-(1-((7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01042] A mixture of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (120 mg, 0.36 mol), 7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine (64.58 mg, 0.44 mmol), triphosgene (129.5 mg, 0.44 mmol) and TEA (367.3 mg, 3.64 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O, stirred at rt for 1h. The precipitate was filtered to afford title product (100 mg, 55.11 %) as a white solid. ESI-MS (M+H) +: 505.2.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 9.49 (s, 1H), 8.34 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.75 (s, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.21 (s, 2H), 4.00 (t, J = 8.5 Hz, 2H), 3.56 (d, J = 11.2 Hz, 2H), 3.20 (t, J = 8.6 Hz, 2H), 3.02 (d, J = 11.1 Hz, 2H), 1.87 – 1.77 (m, 4H), 1.43 (s, 9H). Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01043] A mixture of tert-butyl 3-(1-((7-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (100 mg, 0.20 mmol) in 4M HCl / EA (1 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (62.04 mg, yield: 70.66 %) as a white solid. ESI-MS (M+H) +: 404.9. [01044] 1H NMR (400 MHz, MeOD-d4) δ 9.29 (s, 1H), 9.10 (s, 1H), 8.02 (s, 1H), 7.86 – 7.84 (m, 1H), 6.91 – 6.90 (m, 1H), 4.45 – 4.35 (m, 2H), 4.25 (s, 2H), 4.20 – 4.06 (m, 2H), 3.69 – 3.54 (m, 4H), 2.67 (s, 3H), 2.20 – 2.14 (m, 4H). Example 378 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000546_0001
Compound 378 Step 1: Preparation of tert-butyl 3-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01045] To a mixture of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (100 mg, 0.30 mmol), 2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine hydrochloride (99.00 mg, 0.30 mmol) and TEA (90.90 mg, 0.90 mmol) in THF (5 mL) was added triphosgene (177.60 mg, 0.60 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (50 mg, 33.07%) as a white solid. ESI-MS (M+H) +: 505.3. Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01046] A mixture of tert-butyl 3-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (50 mg, 0.10 mmol) in 4M HCl/EA (5 mL) was stirred at rt for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (9.84 mg, 21.87%) as a white solid. ESI-MS (M+H) +:405.2.1H NMR (400 MHz, DMSO-d6) δ 12.07 (s, 1H), 9.26 (s, 1H), 8.26 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 7.68 (d, J = 9.4 Hz, 1H), 7.59 (dd, J = 9.4, 2.0 Hz, 1H), 6.47 (d, J = 6.2 Hz, 1H), 4.00 – 3.96 (m, 2H), 3.60 – 3.59 (m, 2H), 3.51 – 3.49 (m, 2H), 3.20 – 3.16 (m, 2H), 3.08 – 3.03 (m, 2H), 2.44 (s, 3H), 1.79 – 1.72 (m, 4H). Example 379 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000547_0001
Step 1: Preparation of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate. [01047] To a solution of tert-butyl (S)-2-(hydroxymethyl)piperazine-1-carboxylate (839 mg, 3.88 mmol) in DIEA (6 mL) was added 4-chloro-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (500 mg, 3.23 mmol). The reaction mixture was stirred at 140°C for 16 h in a seal tube. The mixture was diluted with water (20 mL) and extracted with DCM: MeOH =10:1 (30 mL×3), the combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered and filtrate was concentrated in vacuo, the crude was purified by silica gel column chromatography (DCM: MeOH =20:1) to give title compound (470 mg, yield: 39 %) as a yellow solid. ESI-MS (M+H)+: 335.2. Step 2: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1- carboxylate. [01048] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-(hydroxymethyl)piperazine-1-carboxylate (200 mg, 0.598 mmol) in THF (13 mL) were added 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (148 mg, 0.897 mmol), TEA (1.3 mL) and triphosgene (266 mg, 0.897 mmol). The mixture was stirred at r.t for 16 h. The reaction mixure was diluted with water (10 mL) and extracted with DCM: MeOH =10:1 (10 mL×3), the combined organic layers was washed with brine (30 mL), dried over anhydrous Na2SO4, filtered and filtrate was concentrated in vacuo, the crude was purified by silica gel column chromatography (DCM: MeOH =10:1) to give title compound (90 mg, yield: 26 %) as a yellow solid. ESI-MS (M+H)+: 526.2. Step 3: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01049] To a solution of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1- carboxylate (70 mg, 0.133 mmol) in CH2Cl2 (2 mL) was added TFA (1.0 mL). The mixture was stirred at r.t for 1 h. The mixture was concentrated, the crude was purified by Prep-HPLC (0.1% HCl in H2O/MeCN) to give title product (11.74 mg, yield:19 %) as a white solid. ESI- MS (M+H)+: 426.3.1H NMR (400 MHz, DMSO-d6) δ 12.44 (s, 1H), 9.68 (d, J = 8.0 Hz, 1H), 9.47 (s, 1H), 9.21 (s, 1H), 8.17 (s, 1H), 8.07 (d, J = 12.0 Hz, 1H), 7.97 (d, J = 4.0 Hz, 1H), 6.66 (d, J = 8.0 Hz, 1H), 4.08 – 4.03 (m, 2H), 3.71 – 3.68 (m, 4H), 3.32 – 3.30 (m, 3H), 3.23 – 3.18 (m, 4H), 2.45 (s, 3H).
Example 380 – Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000549_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate. [01050] To a solution of tert-butyl (R)-2-(hydroxymethyl)piperazine-1-carboxylate (839 mg, 3.88 mmol) in DIEA (6 mL) was added 4-chloro-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (500 mg, 3.23 mmol). The reaction mixture was stirred at 140°C for 16 h in a seal tube. The mixture was diluted with water (20 mL) and extracted with DCM: MeOH =10:1 (30 mL×3), the combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered and filtrate was concentrated in vacuo, the crude was purified by silica gel column chromatography (DCM: MeOH =20:1) to give title compound (550 mg, yield:46 %) as a yellow solid. ESI-MS (M+H)+: 335.1. Step 2: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1- carboxylate. [01051] To a solution of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-(hydroxymethyl)piperazine-1-carboxylate (200 mg, 0.598 mmol) in THF (13 mL) were added 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (148 mg, 0.897 mmol), TEA (1.3 mL) and triphosgene (266 mg, 0.897 mmol). The mixture was stirred at r.t for 16 h. The reaction mixure was diluted with water (10 mL) and extracted with DCM: MeOH =10:1 (10 mL×3), the combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered and filtrate was concentrated in vacuo, the crude was purified by silica gel column chromatography (DCM: MeOH =10:1) to give title compound (100 mg, yield: 28 %) as a yellow solid. ESI-MS (M+H)+: 526.2. Step 3: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01052] To a solution of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1- carboxylate (80 mg, 0.152 mmol) in CH2Cl2 (2 mL) was added TFA (1 mL). The mixture was stirred at r.t for 1 h. The mixture was concentrated, the crude was purified by Prep-HPLC (0.1% HCl in H2O / MeCN) to give title product (25.13 mg, yield: 35%) as a white solid. ESI-MS (M+H)+: 426.3.1H NMR (400 MHz, DMSO-d6) δ 12.45 (s, 1H), 9.67 (d, J = 4.0 Hz, 1H), 9.54 (s, 1H), 9.29 (s, 1H), 8.17 (s, 1H), 8.07 (d, J = 8.0 Hz, 1H), 7.97 (d, J = 8.0 Hz, 1H), 6.66 (d, J = 8.0 Hz, 1H), 4.06 – 4.03 (m, 2H), 3.86 – 3.84 (m, 2H), 3.71 – 3.69 (m, 2H), 3.32 – 3.29 (m, 3H), 3.21 – 3.19 (m, 4H), 2.45 (s, 3H). Example 381 – Preparation of (S)-N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin- 6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000550_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01053] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 7-(difluoromethyl)-2- methylimidazo[1,2-a]pyridin-6-amine (73.28 mg, 0.37 mmol) in THF (10 mL) were added TEA (93.93 mg, 0.93 mmol) and triphosgene (184.14 mg, 0.62 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 47.70%) as a white solid. ESI-MS (M+H) +: 542.3. Step 2: Preparation of (S)-N-(7-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01054] A mixture of tert-butyl (S)-4-(1-((7-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (80 mg,0.15 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (27.42 mg, 38.30%) as a white solid. ESI-MS (M+H) +:441.9. 1H NMR (400 MHz, DMSO-d6) δ 11.83 (s, 1H), 9.09 (s, 1H), 8.19 (s, 1H), 7.87 – 7.79 (m, 2H), 7.71 (s, 1H), 7.13 (t, J = 54.4 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.01 – 3.96 (m, 2H), 3.63 – 3.59 (m, 2H), 3.16 – 3.12 (m, 2H), 3.02 – 2.97 (m, 1H), 2.92 – 2.63 (m, 4H), 2.35 (s, 3H), 1.05 (d, J = 6.2 Hz, 3H).
Example 382 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-(2- hydroxy-2-methylpropyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000552_0001
Step 1: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(4-(2-hydroxy-2- methylpropyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01055] To a mixture of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4- (piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride (90 mg, 0.21 mmol) in EtOH (3 mL) were added 2,2-dimethyloxirane (75 mg, 1.04 mmol), K2CO3 (87 mg, 0.63 mmol), the mixture was stirred at 120 ℃ for 40 min on M.W. The reaction mixture was diluted with water (5 mL) and extracted with EA (5 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The crude product purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (3.41 mg, 6 %) as a white solid. ESI-MS (M+H) +: 468.1.1H NMR (400 MHz, DMSO-d6) δ 12.00 (s, 1H), 9.20 (d, J = 7.5 Hz, 1H), 7.87 (d, J = 6.2 Hz, 1H), 7.71 (s, 1H), 7.42 (d, J = 11.6 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.14 (s, 1H), 4.04 – 3.97 (m, 2H), 3.29 – 3.27 (m, 4H), 3.14 (t, J = 8.7 Hz, 2H), 2.65 – 2.61 (m, 4H), 2.28 (s, 3H), 2.24 (s, 2H), 1.11 (s, 6H). Example 383 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000553_0001
Step 1: Preparation of methyl 2-bromo-5-methoxyisonicotinate. [01056] To a mixture of 2-bromo-5-fluoroisonicotinic acid (30 g, 40.32 mmol) in MeOH (200 mL) was added MeONa-MeOH (5.4 mol/mL) (76 mL, 409.08 mmol). The mixture was added at for 16 h. The mixture was concentrated in vacuo. The residue was dissolved in MeOH (100 mL), SOCl2 (48 g, 409.08 mmol) was added dropwise to the mixture and stirred at r.t for 16 h. After concentration the residue was diluted with EA (300 mL), washed with H2O and brine, dried with Na2SO4 and concentrated in vacuo. The crude product was purified by silica gel column (PE: EA= 5:1) to give title product (30 g, 89%) as a white solid. ESI-MS (M+H) +: 246.3. Step 2: Preparation of N-(7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [01057] To a solution of methyl 2-bromo-5-methoxyisonicotinate (5 g, 20.24 mmol) in 1,4-dioxane (100 mL) were added diphenylmethanimine (7.3 g, 40.48 mmol), Pd(OAc)2 (455 mg, 2.02 mmol), BINAP (2.5 g, 4.05 mmol), Cs2CO3 (13 g, 40.48 mmol). The mixture was stirred at 115 ℃ for 5 h. The reaction mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=3:1) to give title product (7 g, yield: 99 %) as a yellow oil. ESI-MS (M+H) +:347.2.1H NMR (400 MHz, CDCl3) δ 8.02 (s, 1H), 7.71 (d, J = 7.3 Hz, 2H), 7.42 (t, J = 7.3 Hz, 1H), 7.33 (t, J = 7.5 Hz, 2H), 7.21 (t, J = 7.1 Hz, 3H), 7.07 (dd, J = 7.6, 1.5 Hz, 2H), 6.89 (s, 1H), 3.84 (s, 3H), 3.77 (s, 3H). Step 3: Preparation of methyl 2-amino-5-methoxyisonicotinate. [01058] To a solution of methyl 2-((diphenylmethylene)amino)-5- methoxyisonicotinate (6.5 g, 18.73 mmol) in EA (30 mL) was added 4M HCl/EA (30 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo. The reaction mixture was diluted with water (30 mL) and washed with EA (30 mL x 2). The aqueous phase was adjust pH=9 with sat. NaHCO3, then extracted with EA (30 mL x 3). The organic layer was washed with brine, dried over Na2SO4 and concentration in vacuo to give title product (2.8 g, 81 %) as a yellow solid. ESI-MS (M+H) +: 183.5.1H NMR (400 MHz, CDCl3) δ 7.90 (s, 1H), 6.84 (s, 1H), 4.32 (s, 2H), 3.89 (d, J = 9.6 Hz, 6H). Step 4: Preparation of 1,2-diamino-5-methoxy-4-(methoxycarbonyl)pyridin-1-ium 2,4,6- trimethylbenzenesulfonate. [01059] To a solution of methyl 2-amino-5-methoxyisonicotinate (2 g, 10.93 mmol) in trichloromethane (30 mL) was added O-(mesitylsulfonyl) hydroxylamine (4.7 g, 21.85 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo to give title product (6 g, crude) as a yellow oil. ESI-MS (M+H) +: 198.1. Step 5: Preparation of methyl 6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7- carboxylate. [01060] To a mixture of 1,2-diamino-5-methoxy-4-(methoxycarbonyl)pyridin-1-ium 2,4,6-trimethylbenzenesulfonate (6 g, 15.11 mmol) in Ac2O (30 mL) was added O- (mesitylsulfonyl)hydroxylamine (580 mg, 3.40 mmol). The mixture was stirred at 100 oC for 16 h. The reaction was quenched with H2O (50 mL). The resulting mixture was adjusted to PH=9 with NaOH aqueous solution (1M), and extracted with DCM (80 mL×3). The combined organic layers were washed with brine (80 mL×3), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: EA=3:1) to give title product (2.3 g, yield: 67 %) as a yellow solid. ESI-MS (M+H) +: 222.1. 1H NMR (400 MHz, CDCl3) δ 8.15 (s, 1H), 8.01 (s, 1H), 3.97 (s, 3H), 3.93 (s, 3H), 2.60 (s, 3H). Step 6: Preparation of 6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylic acid. [01061] To a mixture of methyl 6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7- carboxylate (500 mg, 2.26 mmol) in THF (5 mL) and water (5 mL) was added LiOH (110 mg, 4.53 mmol). The mixture was stirred at r.t for 2 h. The mixture was concentrated to remove most of THF. The aqueous phase was adjusted pH=5 with 1 M HCl. The mixture was filtered through a Celite pad and collect solid to give title product (130 mg, 27%) as a white solid. ESI-MS (M+H) +: 208.4.1H NMR (400 MHz, DMSO-d6) δ 8.68 (s, 1H), 7.86 (s, 1H), 3.87 (s, 3H), 2.46 (s, 3H). Step 7: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01062] To a solution of 6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7- carboxylic acid (75 mg, 0.36 mmol) in toluene (20 mL) were added TEA (145 mg, 1.44 mmol), DPPA (300 mg, 1.08 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. Then tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (120 mg, 0.36 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (120 mg, yield: 60 %) as a white solid. ESI-MS (M+H) +:537.1.1H NMR (400 MHz, CDCl3) δ 12.43 (s, 1H), 8.60 (s, 1H), 8.00 (s, 1H), 7.94 (d, J = 5.9 Hz, 1H), 6.41 (d, J = 6.1 Hz, 1H), 4.29 – 4.26 (m, 2H), 4.21 (d, J = 8.2 Hz, 2H), 4.00 (s, 3H), 3.49 (s, 3H), 3.44 (d, J = 6.5 Hz, 2H), 3.15 (d, J = 8.4 Hz, 2H), 3.04 – 2.99 (m, 2H), 1.50 (s, 9H), 1.37 (d, J = 6.8 Hz, 6H). Step 8: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01063] To a solution of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.23 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (32.52 mg, 29%) as a white solid. ESI-MS (M+H) +: 437.1.1H NMR (400 MHz, MeOD-d4) δ 8.39 (s, 2H), 8.22 (s, 1H), 7.92 (d, J = 5.9 Hz, 1H), 6.51 (d, J = 6.0 Hz, 1H), 4.10 – 4.01 (m, 5H), 3.81 (d, J = 12.7 Hz, 2H), 3.47 – 3.38 (m, 2H), 3.12 (t, J = 8.4 Hz, 2H), 2.83 (dd, J = 13.3, 11.5 Hz, 2H), 2.43 (s, 3H), 1.37 (d, J = 6.5 Hz, 6H).
Example 384 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6- methoxy-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000557_0001
Step 1: Preparation of 2-fluoro-4-iodo-6-methoxypyridine. [01064] To a solution of 2,6-difluoro-4-iodopyridine (8.6 g, 35.68 mmol) in THF (100 mL) was added MeONa (7.93 mL, 42.82 mmol, 5.4 M in MeOH). The mixture was stirred at rt for 16 h. The reaction mixture was diluted with H2O (100 mL) and extracted with DCM (100 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo to give title compound (9 g, Y: 99.3%) a yellow oil. ESI-MS (M+H) +: 253.9.1H NMR (400 MHz, DMSO-d6) δ 7.22 (t, J = 0.9 Hz, 1H), 7.19 (dd, J = 2.6, 0.9 Hz, 1H), 3.82 (s, 3H). Step 2: Preparation of tert-butyl (2-(2-fluoro-4-iodo-6-methoxypyridin-3-yl)ethyl)carbamate. [01065] To a solution of 2-fluoro-4-iodo-6-methoxypyridine (8 g, 31.50 mmol) in THF (80 mL) was added LDA (23.62 mL, 47.24 mmol, 2.0 M in THF) at -78°C. The mixture was stirred at -78°C for 1.5 h. Then tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2-dioxide (9.13 g, 40.94 mmol) was added and the reaction mixture was stirred at r.t for 16 h. The reaction mixture was quenched with sat. NH4Cl (100 mL) and extracted with DCM (100 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo to give title compound (10.5 g, Y: 84.0%) a yellow solid. Step 3: Preparation of 2-(2-fluoro-4-iodo-6-methoxypyridin-3-yl)ethan-1-amine HCl salt. [01066] To a solution of tert-butyl (2-(2-fluoro-4-iodo-6-methoxypyridin-3- yl)ethyl)carbamate (10.5 g, 26.45 mmol) in 4M HCl/EA (50 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title compound (8 g, crude) as a yellow solid. ESI-MS (M+H) +: 296.9. Step 4: Preparation of 4-iodo-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine [01067] To a solution of 2-(2-fluoro-4-iodo-6-methoxypyridin-3-yl)ethan-1-amine (8 g, 26.94 mmol) in ACN (80 mL) was added DIEA (20.85 g, 161.62 mmol). The mixture was stirred at 100oC for 48 h. The mixture was diluted with H2O (200 mL), extracted with DCM (200 mL*3), organic layer was concentrated in vacuo to give title compound (5.6 g, Y: 75.1%) as a yellow solid. ESI-MS (M+H) +: 277.0. Step 5: Preparation of 1-(4-iodo-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1- yl)ethan-1-one. [01068] To a mixture of 4-iodo-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (5.6 g, 20.22 mmol) and TEA (6.13 g, 60.66 mmol) in DCM (80 mL) was added acetyl chloride (3.15 g, 40.43 mmol) at 0oC, the mixture was stirred at 0oC for 4 h. The mixture was diluted with H2O (80 mL), extracted with DCM (100 mL*3), organic layer was concentrated in vacuo to give title product (5.5 g, Y: 85.3%) as a yellow solid. ESI-MS (M+H) +: 318.9.1H NMR (400 MHz, DMSO-d6) δ 6.90 (s, 1H), 4.03 (t, J = 8.7 Hz, 2H), 3.88 (s, 3H), 2.91 (t, J = 8.7 Hz, 2H), 2.61 (s, 3H). Step 6: Preparation of tert-butyl (S)-4-(1-acetyl-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [01069] A mixture of 1-(4-iodo-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1- yl)ethan-1-one (5 g, 15.72 mmol), tert-butyl (S)-2-methylpiperazine-1-carboxylate (4.72 g, 23.58 mmol), BINAP (1.96 g, 3.14 mmol), Cs2CO3 (15.33 g, 47.17 mmol) and Pd2(dba)3 (1.44 g, 1.57 mmol) in 1,4-dioxane (50 mL) was stirred at 100oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 3: 1) to give title product (4 g, Y: 65.3%) as a yellow oil. ESI-MS (M+Na) +: 413.1.1H NMR (400 MHz, DMSO-d6)δ 5.85 (s, 1H), 4.23 – 4.12 (m, 1H), 3.97 – 3.87 (m, 2H), 3.78 (s, 3H), 3.78 – 3.72 (m, 1H), 3.45 (t, J = 13.0 Hz, 2H), 3.20 – 3.07 (m, 1H), 3.03 – 2.85 (m, 3H), 2.82 – 2.70 (m, 1H), 2.54 (s, 3H), 1.42 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 7: Preparation of tert-butyl (S)-4-(6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2-methylpiperazine-1-carboxylate. [01070] A mixture of tert-butyl (S)-4-(1-acetyl-6-methoxy-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (2.5 g, 6.41 mmol) and KOH (1.795g, 32.05 mmol) in THF/MeOH/H2O (10 /10 / 5mL) was stirred at 50 oC for 16 h. The mixture was diluted with H2O (30 mL), extracted with DCM (30 mL*3), organic layer concentrated in vacuo to give title product (2 g, Y: 89.7%) as a yellow solid. ESI-MS (M+H) +: 349.1.1H NMR (400 MHz, DMSO-d6) δ 5.88 (s, 1H), 4.18 – 4.08 (m, 1H), 3.80 – 3.72 (m, 2H), 3.68 (s, 3H), 3.43 – 3.39 (m, 2H), 3.13 – 2.75 (m, 5H), 2.72 – 2.61 (m, 1H), 1.42 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 8: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01071] To a mixture of tert-butyl (S)-4-(6-methoxy-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.43 mmol), 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (107 mg, 0.64 mmol) and TEA (641 mg, 6.40 mmol) in THF (12 mL) was added triphosgene (255 mg, 0.86 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (100%EA) to give title product (120 mg, Y: 51.7%) as a yellow solid. ESI-MS (M+H) +: 539.8. Step 9: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6-methoxy-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01072] A mixture of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-methoxy-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (100 mg, 0.20 mmol) in 4M HCl / EA (4 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (68 mg, Y: 83.4 %) as a white solid. ESI-MS (M+H) +: 440.2. 1H NMR (400 MHz, DMSO-d6) δ 11.29 (d, J = 2.0 Hz, 1H), 9.64 (d, J = 6.8 Hz, 1H), 9.20 (s, 1H), 8.85 (s, 1H), 8.10 (s, 1H), 7.99 (d, J = 10.5 Hz, 1H), 6.02 (s, 1H), 4.06 (t, J = 8.7 Hz, 2H), 3.92 (s, 3H), 3.76 (d, J = 11.2 Hz, 2H), 3.40 – 3.32 (m, 2H), 3.17 – 3.06 (m, 4H), 3.00 – 2.90 (m, 1H), 2.42 (s, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 385 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-methoxy-2- methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000560_0001
Compound 385 Step 1: Preparation of tert-butyl 3-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01073] To a solution of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (100 mg, 0.31 mmol) , 7-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride (79.18 mg, 0.37 mmol) in THF (10 mL) were added TEA (93.93 mg, 0.93 mmol) and triphosgene (184.14 mg, 0.62 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 49.94%) as a white solid. ESI-MS (M+H) +:535.4. Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01074] A mixture of tert-butyl 3-(1-((7-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (80 mg,0.15 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep- HPLC (0.05% FA in water / CH3CN) to give title product (11.84 mg, 16.44%) as a white solid. ESI-MS (M+H) +:435.1.1H NMR (400 MHz, DMSO-d6) δ 12.34 (s, 1H), 9.36 (s, 1H), 8.27 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.18 (s, 1H), 6.45 (d, J = 6.2 Hz, 1H), 4.07 (s, 3H), 4.00 – 3.95 (m, 2H), 3.57 – 3.56 (m, 2H), 3.48 – 3.47 (m, 2H), 3.20 – 3.16 (m, 2H), 3.07 – 3.01 (m, 2H), 2.38 (s, 3H), 1.81 – 1.67 (m, 4H). Example 386 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(2,8- dimethylimidazo[1,2-a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000561_0001
Step 1: Preparation of tert-butyl 3-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8-carboxylate. [01075] To a mixture of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (120 mg, 0.36 mmol) in THF (20 mL) were added 2,8-dimethylimidazo[1,2-a]pyrazin-6-amine hydrochloride (86 mg, 0.44 mmol), TEA (728 mg, 7.20 mmol) and triphosgene (130 mg, 0.44 mmol) (in THF ( 1 mL)) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE= 3:1) to give title product (70 mg, yield: 37 %) as a white solid. ESI-MS (M+H) +:519.2.1H NMR (400 MHz, CDCl3) δ 12.07 (s, 1H), 8.86 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 7.39 (s, 1H), 6.32 (d, J = 6.1 Hz, 1H), 4.33 – 4.32 (m, 2H), 4.19 – 4.11 (m, 2H), 3.41 (d, J = 9.5 Hz, 2H), 3.19 – 3.03 (m, 4H), 2.84 (s, 3H), 2.49 (s, 3H), 2.01 – 1.95 (m, 2H), 1.87 (d, J = 7.3 Hz, 2H), 1.49 (s, 9H). Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(2,8-dimethylimidazo[1,2- a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01076] To a mixture of tert-butyl 3-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (50 mg, 0.096 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title compound (37.95 mg, 85 %) as a white solid. ESI-MS (M+H) +:419.1.1H NMR (400 MHz, DMSO-d6) δ 12.30 (s, 1H), 9.59 (s, 1H), 9.46 (s, 1H), 9.23 (s, 1H), 8.31 (s, 1H), 7.99 (d, J = 6.1 Hz, 1H), 6.59 (d, J = 6.3 Hz, 1H), 4.11 (s, 2H), 4.04 (s, 2H), 3.68 (d, J = 12.2 Hz, 2H), 3.40 (d, J = 12.3 Hz, 2H), 3.21 (t, J = 8.6 Hz, 2H), 2.82 (s, 3H), 2.54 (s, 3H), 1.97 (dd, J = 19.6, 9.4 Hz, 4H). Example 387 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methyl- [1,2,4] triazolo[1,5-a] pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1- carboxamide formate.
Figure imgf000562_0001
Compound 387 Step 1: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methyl- [1,2,4] triazolo[1,5-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1- carboxylate. [01077] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2,6-dimethylpiperazine-1-carboxylate (200 mg, 0.6 mmol), 2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (224 mg, 1.5 mmol) and TEA (204 mg, 2 mmol) in THF (10 mL) was added triphosgene (400 mg, 1.3 mmol) at 0oC and the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column (PE: EA = 1: 4) to give title compound (96 mg, Y: 28.9%) as a yellow solid. ESI- MS (M+H) +: 507.2 Step 2: 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methyl- [1,2,4] triazolo[1,5-a] pyridin- 6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. [01078] A mixture of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methyl- [1,2,4] triazolo[1,5-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCI/EA (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (16.18 mg, 26.1%) as a white solid. ESI-MS (M+H) +: 407.2.1H NMR (400 MHz, DMSO-d6) δ 12.05 (s, 1H), 9.25 (d, J = 1.3 Hz, 1H), 8.21 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.68 (d, J = 9.3 Hz, 1H), 7.59 (dd, J = 9.5, 2.0 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 3.99 – 3.98 (m, 2H), 3.64 – 3.62 (m, 4H), 3.16 (t, J = 8.5 Hz, 2H), 2.90 – 2.81 (m, 2H), 2.44 (s, 3H), 1.03 (d, J = 6.3 Hz, 6H). Example 388 – Preparation of (R)-N-(2-methyl- [1,2,4] triazolo[1,5-a] pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
Figure imgf000563_0001
Step 1: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [01079] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (200 mg, 1.3 mmol), 2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-amine (215 mg, 0.67 mmol) and TEA (204 mg, 2 mmol) in THF (10 mL) was added triphosgene (400 mg, 1.3 mmol) at 0 oC and the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and the residue was purified by silica gel column (PE: EA = 5:1) to give title compound (107 mg, Y: 15.6%) as a white solid. ESI-MS (M+H) +: 493.2 Step 2: (R)-N-(2-methyl- [1,2,4] triazolo[1,5-a] pyridin-6-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. [01080] A mixture of tert-butyl (R)-2-methyl-4-(1-((2-methyl- [1,2,4] triazolo[1,5-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1- carboxylate (92 mg, 0.18 mmol) in 4M HCI/EA (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (31.18 mg, 42%) as a white solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 9.25 (d, J = 1.3 Hz, 1H), 8.23 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.72 – 7.63 (m, 1H), 7.59 (dd, J = 9.5, 2.0 Hz, 1H), 6.55 (d, J = 6.2 Hz, 1H), 3.99 – 3.98 (m, 2H), 3.62 (d, J = 12.1 Hz, 2H), 3.13 (t, J = 8.5 Hz, 2H), 3.00 (d, J = 11.6 Hz, 1H), 2.90 – 2.82 (m, 2H), 2.60 – 2.53 (m, 2H), 2.44 (s, 3H), 1.05 (d, J = 6.3 Hz, 3H). Example 389 – Preparation of (S)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate.
Figure imgf000564_0001
Step 1: Preparation of phenyl (6-fluoro-2-methyl-2H-indazol-5-yl)carbamate. [01081] To a mixture of 6-fluoro-2-methyl-2H-indazol-5-amine (2.5 g, 15.15 mmol) and pyridine (3.59 g, 45.45 mmol) in DCM (100 mL) was added phenyl carbonochloridate (3.54 g, 22.73 mmol), the mixture was stirred at 0 oC for 1 h. The mixture was diluted with water (100 mL), extracted with DCM (100 mL×3). The organic layer was washed with brine (500 mL), dried with Na2SO4 and concentrated in vacuo to give title product (5 g, crude) as a yellow solid. ESI-MS (M+H) +: 286.0. Step 2: Preparation of tert-butyl (S)-4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [01082] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (3.7 g, 11.69 mol), phenyl (6-fluoro-2-methyl-2H-indazol-5- yl)carbamate (5 g, 17.54 mmol), and TEA (3.54 g, 35.07 mmol) in THF (100 mL) was stirred at 70 oC for 16 h. The mixture was diluted with water, stirred at rt for 1 h. The precipitate was filtered and diluted with MeOH, stirred at RT for 1 h to afford title product (5 g, 87.7%) as a yellow solid. ESI-MS (M+H) +: 510.2.1H NMR (400 MHz, CDCl3) δ 12.06 (d, J = 2.8 Hz, 1H), 8.54 (d, J = 7.7 Hz, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.81 (s, 1H), 7.34 (d, J = 11.8 Hz, 1H), 6.35 (d, J = 6.0 Hz, 1H), 4.34 (s, 1H), 4.23 – 4.16 (m, 5H), 3.96 (d, J = 13.3 Hz, 1H), 3.49 (d, J = 5.3 Hz, 1H), 3.42 (d, J = 12.4 Hz, 1H), 3.27 – 3.19 (m, 1H), 3.14 – 3.05 (m, 3H), 2.99 – 2.90 (m, 1H), 1.49 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). Step 3: Preparation of (S)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01083] A mixture of tert-butyl (S)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (7 g, 13.75 mmol) in 4M HCl /EA (100 mL) was stirred at RT for 2 h. The precipitate was filtered and diluted with water (50 mL), adjusted pH to 7~8 by 1N Na2CO3. The precipitate was filtered, washed with water (100 mL*2) and dried in vacuo to give title product (4.5 g, yield: 80.02 %) as a pink solid. ESI-MS (M+H) +: 410.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (d, J = 2.8 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 7.88 (d, J = 6.1 Hz, 1H), 7.44 (d, J = 12.2 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.12 (s, 3H), 4.00 (t, J = 8.5 Hz, 2H), 3.61 (d, J = 11.8 Hz, 2H), 3.13 (t, J = 8.6 Hz, 2H), 3.00 (d, J = 11.0 Hz, 1H), 2.91 – 2.77 (m, 3H), 2.59 – 2.52 (m, 1H), 1.05 (d, J = 6.3 Hz, 3H). Step 4: Preparation of (S)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide benzoate. [01084] A mixture of (S)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide (4.49 g, 10.98 mmol) and benzoic acid (1.406 g, 11.53 mmol) in MeOH / DCM (200 mL /10 mL) was stirred at 50 oC for 16 h. The mixture was concentrated in vacuo to removed most of DCM (1/2 V). The precipitate was filtered and dried to afford title product (4.28 g, yield: 73.40 %) as a pink solid ESI-MS (M+H) +: 410.2.1H NMR (400 MHz, DMSO-d6) δ 12.04 (d, J = 2.7 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 7.95 – 7.92 (m, 2H), 7.87 (d, J = 6.1 Hz, 1H), 7.60 (d, J = 7.2 Hz, 1H), 7.49 (t, J = 7.7 Hz, 2H), 7.44 (d, J = 12.2 Hz, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.12 (s, 3H), 3.99 (t, J = 8.6 Hz, 2H), 3.60 (d, J = 11.7 Hz, 3H), 3.13 (s, 2H), 2.96 (d, J = 11.1 Hz, 1H), 2.86 – 2.77 (m, 3H), 1.03 (d, J = 6.3 Hz, 3H). Example 390 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000566_0001
Step 1: Preparation of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [01085] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (200 mg, 0.60 mmol), 6-fluoro-2-methyl-2H-indazol-5- amine (145 mg, 0.90 mmol), triphosgene (268 mg, 0.90 mmol) and TEA (730 mg, 7.23 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at rt for 1 h. The precipitate was filtered and triturated with MeOH (5 mL) to afford title product (200 mg, 62%) as a yellow solid. ESI-MS (M+H) +: 524.0. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2-methyl-2H-indazol-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01086] A mixture of tert-butyl 4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (200 mg, 0.38 mmol) in 4M HCl / EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (39.87 mg, yield: 24.80 %) as a white solid. ESI-MS (M+H) +: 424.0.1H NMR (400 MHz, DMSO-d6) δ 12.01 (d, J = 2.7 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 8.25 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 7.44 (d, J = 12.2 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.12 (s, 3H), 4.01 (t, J = 8.5 Hz, 2H), 3.27 – 3.23 (m, 2H), 3.13 (t, J = 8.6 Hz, 2H), 3.09 (s, 2H), 3.00 – 2.96 (m, 2H), 1.18 (s, 6H). Example 391 – Preparation of 4-(3-oxa-7,9-diazabicyclo[3.3.1]nonan-7-yl)-N-(7-fluoro- 2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000567_0001
Compound 391 Step 1: Preparation of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3-oxa-7,9- diazabicyclo[3.3.1]nonane-9-carboxylate. [01087] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (163 mg, 1.05 mmol), tert-butyl 3-oxa-7,9-diazabicyclo[3.3.1]nonane-9-carboxylate (200 mg, 0.88 mmol) in DIEA (1 mL) was stirred at 140oC for 24 h in a sealed tube. The mixture was concentrated in vacuo and purified by silica gel column (DCM:MeOH=20:1) to give title product (130 mg, Y: 42.7%) as a yellow solid. ESI-MS (M+H) +: 347.1. Step 2: Preparation of tert-butyl 7-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3-oxa-7,9- diazabicyclo[3.3.1]nonane-9-carboxylate. [01088] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3- oxa-7,9-diazabicyclo[3.3.1]nonane-9-carboxylate (100 mg, 0.29 mmol), 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (71.8 mg, 0.43 mmol) and TEA (431 mg, 4.30 mmol) in THF (6 mL) was added triphosgene (128 mg, 0.43 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (100%EA) to give title product (50 mg, Y: 32.3%) as a yellow solid. ESI-MS (M+H) +: 538.2. Step 3: Preparation of 4-(3-oxa-7,9-diazabicyclo[3.3.1]nonan-7-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01089] A mixture of tert-butyl 7-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3-oxa-7,9- diazabicyclo[3.3.1]nonane-9-carboxylate (40 mg, 0.07 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % TFA in water / CH3CN) to give title product (16 mg, Y: 49.1 %) as a yellow solid. ESI-MS (M+H) +: 338.1.1H NMR (400 MHz, DMSO-d6) δ 12.53 (s, 1H), 9.68 (s, 1H), 9.67 (d, J = 6.6 Hz, 1H), 8.16 (s, 1H), 8.08 (d, J = 10.0 Hz, 1H), 7.91 (d, J = 6.1 Hz, 1H), 6.59 (d, J = 6.3 Hz, 1H), 4.18 – 4.13 (m, 4H), 4.01 – 3.96 (m, 4H), 3.65 – 3.55 (m, 4H), 3.26 (t, J = 8.5 Hz, 2H), 2.45 (s, 3H). Example 392 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000568_0001
Compound 392 Step 1: Preparation of (E)-N'-(5-bromo-4-fluoropyridin-2-yl)-N,N-dimethylformimidamide. [01090] To a mixture of 5-bromo-4-fluoropyridin-2-amine (50 g, 263.2 mmol) and DMF-DMA (43.8 g, 368.4 mmol) in DMF (300 mL) was stirred at 80℃ for 4 h. The mixture diluted with H2O (1000 mL) and the precipitate was filtered, washed with water and dried in vacuo to give title product (30 g, Y: 46.4%) as a yellow solid. ESI-MS (M+H) +: 246.0.1H NMR (400 MHz, DMSO-d6) δ 8.51 (s, 1H), 8.34 (d, J = 10.5 Hz, 1H), 6.77 (d, J = 11.0 Hz, 1H), 3.10 (s, 3H), 2.99 (s, 3H). Step 2: Preparation of (E)-N'-(5-bromo-4-fluoropyridin-2-yl)-N-hydroxyformimidamide. [01091] To a mixture of (E)-N'-(5-bromo-4-fluoropyridin-2-yl)-N,N- dimethylformimidamide (28 g, 113.82 mmol) and NH2-OH.HCl(15.7 g, 227.64 mmol) in MeOH (300 mL) was stirred at 80℃ for 1h. The reaction was concentrated in vacuo to give title product (30 g, crude) as a yellow solid. ESI-MS (M+H) +: 235.9. Step 3: Preparation of 6-bromo-7-fluoro-[1,2,4]triazolo[1,5-a]pyridine. [01092] To a mixture of (E)-N'-(5-bromo-4-fluoropyridin-2-yl)-N- hydroxyformimidamide (25 g, 106.84 mmol) in THF (300 mL) was added TFAA (44.87 g, 213.86 mmol) at 0℃. The reaction solution was stirred at rt for 16 h. The reaction was concentrated in vacuo and purified by silica gel column chromatography (PE: EA=3:1) to give title product (14 g, Y: 60.6%) as a yellow solid. ESI-MS (M+H) +: 217.9.1H NMR (400 MHz, DMSO-d6) δ 9.60 (d, J = 6.4 Hz, 1H), 8.55 (s, 1H), 8.01 (d, J = 8.9 Hz, 1H). Step 4: Preparation of N-(7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [01093] A mixture of 6-bromo-7-fluoro-[1,2,4]triazolo[1,5-a]pyridine (9 g, 41.67 mmol), diphenylmethanimine (9.1 g, 49.99 mmol), BINAP (5.2 g, 8.35 mmol), Pd(OAc)2(1.02 g, 4.18 mmol) and Cs2CO3 (40.63 g, 125.01 mmol) in dioxane (100 mL) was stirred at 110℃ for 16 h under N2. The reaction concentrated in vacuo to and purified by silica gel chromatography (PE: EA=2:1) to give title product (3 g, Y: 22.7%) as a yellow solid. ESI-MS (M+H) +: 317.0. Step 5: Preparation of 7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-amine HCl salt. [01094] A mixture of N-(7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (2.5 g, 7.89 mmol) in 4 M HCl/EA (25 mL) was stirred at RT for 16h. The mixture diluted with EA (100 mL), the precipitate was filtered to give title product (700 mg, y: 58.0%) as a yellow solid. ESI-MS (M+H) +: 153.2.1H NMR (400 MHz, DMSO-d6) δ 8.90 (s, 1H), 8.53 (d, J = 7.2 Hz, 1H), 7.92 (d, J = 10.1 Hz, 1H) Step 6: Preparation of tert-butyl 3-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01095] To a mixture of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (150 mg, 0.45 mmol), 7-fluoro-[1,2,4]triazolo[1,5- a]pyridin-6-amine (69.3 mg, 0.45 mmol) and TEA (687 mg, 6.80 mmol) in THF (12 mL) was added triphosgene (202 mg, 0.68 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:10) to give title product (140 mg, Y: 60.7%) as a yellow solid. ESI-MS (M+H) +: 509.3.1H NMR (400 MHz, DMSO-d6) δ 12.38 (d, J = 2.4 Hz, 1H), 9.56 (d, J = 6.8 Hz, 1H), 8.44 (s, 1H), 7.96 (d, J = 10.8 Hz, 1H), 7.89 (d, J = 6.1 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.22 (s, 2H), 4.02 (t, J = 8.6 Hz, 2H), 3.57 (d, J = 10.8 Hz, 2H), 3.22 (t, J = 8.6 Hz, 2H), 3.03 (d, J = 11.1 Hz, 2H), 1.90 – 1.76 (m, 4H), 1.43 (s, 9H). Step 7: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-fluoro-[1,2,4]triazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01096] A mixture of tert-butyl 3-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylatee (120 mg, 0.24 mmol) in 4M HCl / EA (6 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (49 mg, Y: 51.0 %) as a white solid. ESI-MS (M+H) +: 409.2.1H NMR (400 MHz, DMSO-d6) δ 12.42 (d, J = 2.3 Hz, 1H), 9.56 (d, J = 6.8 Hz, 1H), 8.44 (s, 1H), 8.25 (s, 1H), 7.95 (d, J = 10.9 Hz, 1H), 7.86 (d, J = 6.1 Hz, 1H), 6.46 (d, J = 6.2 Hz, 1H), 4.04 – 3.96 (m, 2H), 3.58 – 3.53 (m, 2H), 3.50 (d, J = 11.7 Hz, 2H), 3.20 (t, J = 8.5 Hz, 2H), 3.04 (d, J = 10.3 Hz, 2H), 1.78 – 1.63 (m, 4H).
Example 393 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000571_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01097] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 7-fluoro-[1,2,4]triazolo[1,5- a]pyridin-6-amine (68 mg, 0.45 mmol) and TEA (687 mg, 6.80 mmol) in THF (12 mL) was added triphosgene (200.68 mg, 0.68 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:6) to give title product (90 mg, Y: 39.2%) as a yellow solid. ESI-MS (M+H) +: 511.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01098] A mixture of tert-butyl (2R,6S)-4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (70 mg, 0.14 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (29 mg, Y: 51.8 %) as a white solid. ESI-MS (M+H) +: 411.2.1H NMR (400 MHz, DMSO-d6) δ 12.39 (d, J = 2.2 Hz, 1H), 9.56 (d, J = 6.8 Hz, 1H), 8.44 (s, 1H), 8.22 (s, 1H), 7.95 (d, J = 10.9 Hz, 1H), 7.87 (d, J = 6.1 Hz, 1H), 6.55 (d, J = 6.2 Hz, 1H), 4.04 – 3.97 (m, 2H), 3.64 (d, J = 10.8 Hz, 2H), 3.16 (d, J = 8.5 Hz, 2H), 2.88 – 2.78 (m, 2H), 2.42 (d, J = 10.8 Hz, 2H), 1.02 (d, J = 6.3 Hz, 6H). Example 394 – Preparation of (R)-N-(6-methoxy-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000572_0001
Step 1: Preparation of methyl (E)-2-(((dimethylamino)methylene)amino)-5- methoxyisonicotinate. [01099] To a mixture of methyl 2-amino-5-methoxyisonicotinate (4.5 g, 24.59 mmol) in MeOH (100 mL) was DMF-DMA (4.4 g, 36.89 mmol). The mixture was added at 75oC for 3 h. The reaction mixture was diluted with water (100 mL) and extrated with EA (100 mLx3). The organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo to give title product (5 g, 85%) as a yellow solid. ESI-MS (M+H) +: 238.2.1H NMR (400 MHz, CDCl3) δ 8.30 (s, 1H), 8.05 (s, 1H), 7.28 (s, 1H), 3.93 (s, 3H), 3.90 (s, 3H), 3.08 (s, 6H). Step 2: Preparation of methyl 6-methoxy-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylate. [01100] To a solution of methyl (E)-2-(((dimethylamino)methylene)amino)-5- methoxyisonicotinate (6 g, 25.32 mmol) in MeOH (60 mL) was added Pyridine (6 mL) (aminooxy)sulfonic acid (4.3 g, 37.97 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was filtered through a Celite pad and collect solid to give title product (1 g, 18%) as a white solid. ESI-MS (M+H) +: 208.1.1H NMR (400 MHz, DMSO-d6) δ 8.87 (s, 1H), 8.54 (s, 1H), 8.12 (s, 1H), 3.91 (s, 3H), 3.88 (s, 3H). Step 3: Preparation of 6-methoxy-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylic acid. [01101] To a mixture of methyl (E)-2-(((dimethylamino)methylene)amino)-5- methoxyisonicotinate (500 mg, 2.04 mmol) in THF (5 mL) and water (5 mL) was added LiOH (115 mg, 4.81 mmol). The mixture was stirred at r.t for 2 h. The mixture was concentrated to remove most of THF. The aqueous phase was adjusted pH=5 with 1 M HCl. The mixture was filtered through a Celite pad and collect solid to give title product (400 mg, 85%) as a white solid. ESI-MS (M+H) +: 194.0.1H NMR (400 MHz, DMSO-d6) δ 8.81 (s, 1H), 8.51 (s, 1H), 8.03 (s, 1H), 3.90 (s, 3H). Step 4: Preparation of tert-butyl (R)-4-(1-((6-methoxy-[1,2,4]triazolo[1,5-a]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01102] To a solution of 6-methoxy-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylic acid (92 mg, 0.47 mmol) in toluene (20 mL) were added TEA (90 mg, 1.88 mmol), DPPA (390 mg, 1.41 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. Then tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (80 mg, yield: 33 %) as a white solid. ESI-MS (M+H) +:509.3.1H NMR (400 MHz, CDCl3) δ 12.48 (s, 1H), 8.72 (s, 1H), 8.18 (s, 1H), 8.10 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 6.37 (d, J = 6.0 Hz, 1H), 4.35 – 4.34 (m, 1H), 4.23 – 4.16 (m, 2H), 4.03 (s, 3H), 3.97 (d, J = 13.4 Hz, 1H), 3.53 (d, J = 11.3 Hz, 1H), 3.44 (d, J = 12.6 Hz, 1H), 3.28 – 3.20 (m, 1H), 3.16 – 3.07 (m, 3H), 2.97 – 2.96 (m, 1H), 1.49 (s, 9H), 1.31 (d, J = 6.7 Hz, 3H). Step 5: Preparation of (R)-N-(6-methoxy-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01103] To a solution of tert-butyl (R)-4-(1-((6-methoxy-[1,2,4]triazolo[1,5-a]pyridin- 7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (60 mg, 0.12 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (40.17 mg, 64%) as a white solid. ESI-MS (M+H) +:409.1.1H NMR (400 MHz, MeOD-d4) δ 8.50 (s, 1H), 8.35 (s, 1H), 8.17 (s, 1H), 7.91 (d, J = 5.9 Hz, 1H), 6.47 (d, J = 6.0 Hz, 1H), 4.13 – 4.05 (m, 5H), 3.76 (d, J = 13.5 Hz, 2H), 3.48 (dd, J = 9.3, 5.5 Hz, 2H), 3.27 (d, J = 9.6 Hz, 1H), 3.21 – 3.09 (m, 3H), 2.96 (dd, J = 13.7, 10.4 Hz, 1H), 1.40 (d, J = 6.6 Hz, 3H). Example 395 – Preparation of (R)-N-(2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. NH
Figure imgf000574_0001
Step 1: Preparation of 5-bromo-2-methyl-2H-pyrazolo[3,4-b]pyridine. [01104] A mixture of 5-bromo-2H-pyrazolo[3,4-b]pyridine (25.2 g, 127.27 mmol), trimethyloxonium tetrafluoroborate (20.72 g, 140 mmol) in EA (250 mL) was stirred at RT for 2 h. the mixture was diluted with water (200 mL), extracted with EA (200 mL×3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 63 %) to give title product (5.7 g, yield: 21.22 %) as a yellow solid. ESI-MS (M+H) +: 214.0.1H NMR (400 MHz, CDCl3) δ 8.65 (d, J = 2.3 Hz, 1H), 8.15 (d, J = 2.3 Hz, 1H), 7.90 (s, 1H), 4.25 (s, 3H). Step 2: Preparation of N-(2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-1,1- diphenylmethanimine. [01105] A mixture of 5-bromo-2-methyl-2H-pyrazolo[3,4-b]pyridine (5.1 g, 24.28 mmol), diphenylmethanimine (5.3 g, 29.14 mmol), Pd2(dba)3 (2.22 g, 2.43 mmol), BINAP (3 g, 4.80 mmol) and Cs2CO3 (15.8 g, 48.56 mmol) in 1,4-dioxnae (100 mL) was stirred at 100 oC for 16 h under N2. The mixture was concentrated in vacuo. The residue was diluted with water (100 mL), extracted with DCM (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 78 %) to give title product (1.5 g, yield: 19.8 %) as a yellow solid. ESI-MS (M+H) +: 313.1.1H NMR (400 MHz, CDCl3) δ 8.22 (d, J = 2.5 Hz, 1H), 7.79 – 7.75 (m, 2H), 7.70 (s, 1H), 7.51 – 7.47 (m, 1H), 7.45 – 7.41 (m, 2H), 7.27 – 7.24 (m, 4H), 7.16 – 7.12 (m, 2H), 4.17 (s, 3H). Step 3: Preparation of 2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine hydrochloride. [01106] A mixture of N-(2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-1,1- diphenylmethanimine (1.5 g, 4.81 mmol) in 4M HCl / EA (20 mL) was stirred at RT for 16 h. The precipitate was filtered and triturated with EA to afford title product (200 mg, 32.32 %) as a white solid. ESI-MS (M+H) +: 149.1.1H NMR (400 MHz, DMSO-d6) δ 8.61 (d, J = 2.5 Hz, 1H), 8.56 (s, 1H), 8.31 (d, J = 1.7 Hz, 1H), 4.24 (s, 3H). Step 4: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01107] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mol), 2-methyl-2H-pyrazolo[3,4-b]pyridin-5- amine hydrochloride (56 mg, 0.38 mmol), triphosgene (113 mg, 0.38 mmol) and TEA (301 mg, 3.77 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at rt for 1h, the precipitate was filtered to afford title product (90 mg, 58.14 %) as a white solid. ESI-MS (M+H) +: 493.3. Step 5: Preparation of (R)-N-(2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01108] A mixture of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (80 mg, 0.16 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 2 h. [01109] The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (51.9 mg, yield: 82.75 %) as a white soild. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6) δ 9.76 (s, 2H), 8.71 (s, 1H), 8.42 (s, 1H), 8.38 (s, 1H), 7.86 (s, 1H), 6.84 – 6.82 (m, 1H), 4.20 (s, 3H), 4.06 – 3.95 (m, 2H), 3.74 – 3.04 (m, 9H), 1.32 (d, J = 6.2 Hz, 3H). Example 396 – Preparation of (R)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000576_0001
Boc Step 1: Preparation of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [01110] To a solution of 6-fluoro-2-methyl-2H-indazol-5-amine (93 mg, 0.48 mmol) in THF (5 mL) were added tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.45 mmol) and TEA (476 mg, 4.6mmol), triphosgene (168 mg, 0.56 mmol) at 0℃, The mixture was stirred at r.t for 16 h. After concentration, the residue was diluted with water (10 mL), extracted with DCM (10 mLx3). The organic layer washed with brine (10 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE=3:1) to give title product (107 mg, 45 %) as a white solid. ESI-MS (M+H) +:510.3. [01111] Step 2: Preparation of (R)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. To a solution of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.25 mmol) in EA (6 mL) was added 3M HCl / EA (6 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (7.74 mg, 8%) as a white solid. ESI-MS (M+H) +:410.0. 1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 8.43 (d, J = 8.1 Hz, 1H), 8.30 (s, 1H), 8.21 (s, 1H), 7.87 (d, J = 6.2 Hz, 1H), 7.44 (d, J = 12.1 Hz, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.11 (s, 3H), 3.99 (t, J = 8.3 Hz, 2H), 3.61 – 3.57 (m, 2H), 3.15 – 3.11 (m, 2H), 2.96 – 2.92 (m, 1H), 2.87 – 2.75 (m, 4H), 1.02 (d, J = 6.0 Hz, 3H). Example 397 – Preparation of (R)-N-(7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000577_0001
Compound 397 Step 1: Preparation of tert-butyl (R)-4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01112] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (146 mg, 0.46 mmol), 7-fluoro-[1,2,4]triazolo[1,5- a]pyridin-6-amine (70 mg, 0.46 mmol) and TEA (693 mg, 6.86 mmol) in THF (12 mL) was added triphosgene (203 mg, 0.69 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:6) to give title product (80 mg, Y: 35.2%) as a yellow solid. ESI-MS (M+H) +: 497.2.1H NMR (400 MHz, DMSO-d6) δ 12.34 (s, 1H), 9.57 (d, J = 6.7 Hz, 1H), 8.45 (s, 1H), 8.23 (s, 1H), 7.67 (s, 1H), 6.56 (d, J = 6.2 Hz, 1H), 4.22 – 4.14 (m, 1H), 4.04 (t, J = 8.5 Hz, 2H), 3.86 – 3.74 (m, 2H), 3.71 – 3.57 (m, 3H), 3.22 – 3.16 (m, 2H), 3.00 – 2.93 (m, 1H), 1.43 (s, 9H), 1.19 (d, J = 6.6 Hz, 3H). Step 2: Preparation of (R)-N-(7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01113] A mixture of tert-butyl (R)-4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (60 mg, 0.12 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (28 mg, Y: 59.6 %) as a white solid. ESI-MS (M+H) +: 397.2.1H NMR (400 MHz, DMSO-d6) δ 12.37 (d, J = 2.1 Hz, 1H), 9.55 (d, J = 6.7 Hz, 1H), 8.44 (s, 1H), 8.23 (s, 1H), 7.95 (d, J = 10.9 Hz, 1H), 7.88 (d, J = 6.1 Hz, 1H), 6.55 (d, J = 6.2 Hz, 1H), 4.01 (t, J = 8.5 Hz, 2H), 3.62 (d, J = 11.9 Hz, 2H), 3.16 (t, J = 8.5 Hz, 2H), 2.98 – 2.75 (m, 4H), 2.60 – 2.53 (m, 1H), 1.04 (d, J = 6.3 Hz, 3H). Example 398 – Preparation of (R)-N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000578_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01114] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (10 mL) were added 2,8- dimethylimidazo[1,2-a]pyrazin-6-amine hydrochloride (74 mg, 0.37 mmol), TEA (627 mg, 6.20 mmol) and triphosgene (110 mg, 0.37 mmol) (in THF ( 1 mL)) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (50 mL) and stirred at r.t for 20 min. The mixture was filtered through a Celite pad and collect solid to give title product (50 mg, yield: 31 %) as a white solid. ESI-MS (M+H) +:507.4.1H NMR (400 MHz, CDCl3) δ 12.01 (s, 1H), 8.86 (s, 1H), 8.03 (d, J = 6.0 Hz, 1H), 7.39 (s, 1H), 6.37 (d, J = 6.0 Hz, 1H), 4.35 – 4.34 (m, 1H), 4.20 – 4.12 (m, 2H), 3.96 (d, J = 13.5 Hz, 1H), 3.53 – 3.52 (m, 1H), 3.43 (d, J = 12.5 Hz, 1H), 3.15 – 3.12 (m, 4H), 2.95 (dd, J = 11.8, 8.4 Hz, 1H), 2.84 (s, 3H), 2.49 (s, 3H), 1.49 (s, 9H), 1.31 – 1.30 (m, 3H). Step 2: Preparation of (R)-N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01115] To a mixture of tert-butyl (R)-4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.079 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title compound (21.83 mg, 61 %) as a white solid. ESI-MS (M+H) +:407.2.1H NMR (400 MHz, MeOD-d4) δ 8.87 (s, 1H), 8.47 (s, 1H), 8.03 (d, J = 6.0 Hz, 1H), 7.73 (s, 1H), 6.60 (d, J = 6.1 Hz, 1H), 4.15 – 4.06 (m, 2H), 3.78 (d, J = 13.3 Hz, 2H), 3.44 – 3.37 (m, 2H), 3.17 (t, J = 8.7 Hz, 4H), 2.91 (dd, J = 13.5, 10.4 Hz, 1H), 2.75 (s, 3H), 2.45 (s, 3H), 1.35 (d, J = 6.6 Hz, 3H). Example 399 – Preparation of (S)-N-(7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000579_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01116] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mol), 7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- amine (86 mg, 0.57 mmol), triphosgene (169.3 mg, 0.57 mmol) and TEA (571.6 mg, 5.66 mmol) in THF (15 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at rt for 1h, the precipitate was filtered to afford title product (35 mg, 14.98 %) as a white solid. ESI-MS (M+H) +: 497.3.1H NMR (400 MHz, CDCl3) δ 12.38 (s, 1H), 9.75 (d, J = 6.7 Hz, 1H), 8.26 (s, 1H), 7.94 (d, J = 6.0 Hz, 1H), 7.44 (d, J = 10.1 Hz, 1H), 6.38 (d, J = 6.1 Hz, 1H), 4.35 – 4.34 (m, 1H), 4.22 – 4.16 (m, 2H), 3.97 (d, J = 13.3 Hz, 1H), 3.55 (d, J = 11.6 Hz, 1H), 3.45 (d, J = 12.4 Hz, 1H), 3.29 – 3.21 (m, 1H), 3.17 – 3.09 (m, 3H), 3.01 – 2.93 (m, 1H), 1.49 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01117] A mixture of tert-butyl (S)-4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (35 mg, 0.07 mmol) in 4M HCl /EA (1 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (22.17 mg, yield: 73.31 %) as a white solid. ESI-MS (M+H) +: 397.2.1H NMR (400 MHz, MeOD-d4) δ 9.47 (s, 1H), 8.89 (s, 1H), 7.96 (d, J = 9.1 Hz, 1H), 7.85 (d, J = 7.2 Hz, 1H), 6.97 (d, J = 7.2 Hz, 1H), 4.42 (t, J = 8.3 Hz, 2H), 4.24 (t, J = 12.7 Hz, 2H), 3.63 – 3.53 (m, 5H), 3.43 – 3.35 (m, 2H), 1.44 (d, J = 6.5 Hz, 3H). Example 400 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methyl-2H-indazol-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
Figure imgf000580_0001
Step 1: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-2H-indazol-5-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate. [01118] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2-methyl-2H-indazol-5-amine (132.8 mg, 0.95 mmol) and TEA (136.8 mg,1.35 mmol) in THF (20 mL) was added triphosgene (268.3 mg, 0.9 mmol) at 0oC and the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 9) to give title compound (96 mg, Y: 42.0%) as a yellow solid. ESI-MS (M+H) +: 506.2 Step 2: 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methyl-2H-indazol-5-yl)-2,3-dihydro-1H- pyrrolo[2,3-b] pyridine-1-carboxamide formate. [01119] A mixture of tert-butyl 2,2-dimethyl-4-(1-((2-methyl-2H-indazol-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl) piperazine-1-carboxylate (70 mg, 0.14 mmol) in 4M HCI/EA (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (30.8 mg, Y:53.6%) as a brown solid. ESI-MS (M+H) +: 406.2.1H NMR (400 MHz, DMSO-d6) δ 11.74 (s, 1H), 8.28 (s, 1H), 8.22 (s, 1H), 7.98 (d, J = 1.3 Hz, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.55 (d, J = 9.1 Hz, 1H), 7.22 (dd, J = 9.2, 2.0 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 3.99 (t, J = 8.6 Hz, 2H), 3.30 – 3.22 (m, 2H), 3.14 – 3.06 (m, 4H), 3.01 – 2.95 (m, 2H), 1.19 (s, 6H). Example 401 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000581_0001
Step 1: Preparation of tert-butyl 4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01120] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mol), 7-fluoro-[1,2,4]triazolo[1,5-a]pyridin- 6-amine (80 mg, 0.54 mmol), triphosgene (160 mg, 0.54 mmol) and TEA (545 mg, 5.4 mmol) in THF (15 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at rt for 1h, the precipitate was filtered to afford title product (50 mg, 21.78 %) as a white solid. ESI-MS (M+H) +: 511.3. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-[1,2,4]triazolo[1,5- a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01121] A mixture of tert-butyl 4-(1-((7-fluoro-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (40 mg, 0.08 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (24.60 mg, yield: 74.78 %) as a yellow solid. ESI-MS (M+H) +: 411.2.1H NMR (400 MHz, MeOD-d4) δ 9.39 (s, 1H), 8.74 (s, 1H), 7.88 – 7.81 (m, 2H), 6.93 – 6.92 (m, 1H), 4.43 – 4.35 (m, 2H), 3.97 – 3.87 (m, 2H), 3.79 – 3.69 (m, 2H), 3.60 – 3.52 (m, 2H), 3.49 – 3.46 (m, 2H), 1.51 (s, 6H). Example 402 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2-b] pyridazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. DIBAL-H N Cl DCM, -78 oC O Br
Figure imgf000582_0001
2 h step 3
Figure imgf000582_0002
step 4 step 5 100 C, 16 h step 6
Figure imgf000582_0003
Compound 402 Step 1: Preparation of 5-bromo-6-methyl-2-oxo-1,2-dihydropyridine-3-carbonitrile. [01122] A mixture of 6-methyl-2-oxo-1,2-dihydropyridine-3-carbonitrile (50 g, 372.74 mmol) and NBS (72.97 g, 408.47 mmol) in DCE (500 mL) was stirred at 90oC for 16 h. The mixture was diluted with water (300 mL), extracted with DCM (400 mL×3), organic layer was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 3) to give title compound (45 g, Y:57.0%) as a yellow solid. ESI-MS (M+H) +: 215.0. Step 2: Preparation of 5-bromo-2-chloro-6-methylnicotinonitrile. [01123] A mixture of 5-bromo-6-methyl-2-oxo-1,2-dihydropyridine-3-carbonitrile (45 g, 213 mmol) in POCl3 (450 mL) was stirred at 80oC for 16h. The mixture was concentrated in vacuo and diluted with ice-water (1 L), extracted with DCM (500 mL×3), organic layer was concentrated in vacuo to give title compound (27 g, Y:57.0%) as a yellow solid. ESI-MS (M+H) +: 236.9. Step 3: Preparation of 5-bromo-2-chloro-6-methylnicotinaldehyde. [01124] A mixture of 5-bromo-2-chloro-6-methylnicotinonitrile (20 g, 87.3mmol) and DIBAL-H (86 ml,175.6 mmol) in DCM (500 mL) was stirred at -78oC for 2h. The mixture was concentrated in vacuo and diluted with water (300 mL), extracted with DCM (300 mL*3), organic layer was concentrated in vacuo to give title compound (5 g, Y:26%) as a white solid. ESI-MS (M+H) +: 235.5. Step 4: Preparation of 5-bromo-6-methyl-2H-pyrazolo[3,4-b] pyridine. [01125] A mixture of 5-bromo-2-chloro-6-methylnicotinaldehyde (4 g, 17 mmol) and NH2-NH2 (20 ml) in 1.4-dioxane (50 mL) was stirred at 145oC for 16h. The mixture diluted with water (50 mL), extracted with DCM (50 mL×3), organic layer and concentrated in vacuo. The residue was purified by silica gel column (PE: EA = 1: 3) to give title compound (2.2 g, Y: 61%) as a white solid. ESI-MS (M+H) +: 213.91H NMR (400 MHz, DMSO-d6) δ 8.54 (s, 1H), 8.12 (s, 1H), 2.74 (s, 3H). Step 5: Preparation of 5-bromo-2,6-dimethyl-2H-pyrazolo[3,4-b] pyridine. [01126] A mixture of 5-bromo-6-methyl-2H-pyrazolo[3,4-b] pyridine (2.2 g,10.3 mmol) and trimethyloxonium tetrafluoroborate (1.53 g,10.3 mmol) in EA (30 mL) was stirred at rt for 2h. The mixture diluted with water (30 mL), extracted with EA (20 mL×3), the organic layer was concentrated in vacuo. The residue was purified by silica gel column (PE: EA = 1: 3) to give title compound (1.5 g, Y: 65%) as a white solid. ESI-MS (M+H) +: 228.0 1H NMR (400 MHz, DMSO-d6) δ 8.54 (s, 1H), 8.40 (s, 1H), 4.23 (s, 3H), 2.56 (s, 3H). Step 6: Preparation of N-(2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-yl)-1,1- diphenylmethanimine. [01127] A mixture of 5-bromo-2,6-dimethyl-2H-pyrazolo[3,4-b] pyridine (1 g,4.4 mmol) diphenylmethanimine (4 g,23.7 mmol) BINAP (0.55 g,0.88 mmol) Pd (OAc)2 (0.047 g, 23.7 mmol) and Cs2CO3 (4.3 g, 13.2 mmol) in 1,4-dioxane (50 ml) was stirred at 110℃ for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo, the residue was purified by column chromatography (PE/EA=2:1) to give title product (1.3 g, Y: 90%) as a yellow solid. ESI-MS (M+H)+: 327.11H NMR (400 MHz, DMSO-d6) δ 8.03 (s, 1H), 7.78 – 7.71 (m, 2H), 7.61 – 7.45 (m, 3H), 7.35 – 7.26 (m, 3H), 7.22 – 7.15 (m, 2H), 7.00 (s, 1H), 4.05 (s, 3H), 2.46 (s, 3H). Step 7: Preparation of 2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-amine hydrochloride. [01128] A mixture of N-(2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-yl)-1,1- diphenylmethanimine (1 g, 4.4 mmol) in HCI/EA (15 mL) was stirred at rt for 2 h. After concentration, the residue was dissolved in H2O and basified to pH 10 with Na2CO3, extracted with EA (20 mL×3), the organic layer was concentrated in vacuo. The residue was purified by column chromatography (PE/EA=2:1) to give title product 745 mg, Y: 87%) as a yellow solid. ESI-MS (M+H)+: 163.1 Step 8: Preparation of tert-butyl 4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01129] A mixture of 2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-amine hydrochloride (100 mg, 0.74 mmol), tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (204.9 mg, 0.61 mmol) and TEA (1 mL) in THF (20 ml) was added triphosgene (366.6 mg, 1.23 mmol) at 0oC and the mixture was stirred at RT for 16h. The mixture was concentrated in vacuo and purified by silica gel chromatography (PE: EA = 1: 10) to give title compound (85 mg, Y: 26.7%) as a yellow solid. ESI-MS (M+H)+: 521.2 Step 9: Preparation of N-(2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. [01130] A mixture of tert-butyl 4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b] pyridin-5-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (85 mg, 0.167 mmol) in 4M HCI/EA (5 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 % FA in water / ACN) to give title product (35.65 mg, Y:51.9%) as a white solid. ESI-MS (M+H)+: 421.21H NMR (400 MHz, DMSO-d6) δ 11.82 (s, 1H), 8.68 (s, 1H), 8.02 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.08 – 3.93 (m, 5H), 3.18 (s, 2H), 3.12 (t, J = 8.5 Hz, 2H), 3.01 (s, 2H), 2.87 (s, 2H), 2.68 (s, 3H), 1.10 (s, 6H). Example 403 – Preparation of (R)-N-(6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 7-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000584_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01131] To a solution of 6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7- carboxylic acid (78 mg, 0.37 mmol) in toluene (20 mL) were added TEA (149 mg, 1.48 mmol), DPPA (305 mg, 1.11 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. Then tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (120 mg, 0.36 mmol) was added to the solution and stirred at 90 o C for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (70 mg, yield: 36 %) as a white solid. ESI-MS (M+H) +:523.3. Step 2: Preparation of (R)-N-(6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01132] To a solution of tert-butyl (R)-4-(1-((6-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.096 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (31.40 mg, 71%) as a white solid. ESI-MS (M+H) +: 423.3.1H NMR (400 MHz, MeOD-d4) δ 8.44 (s, 2H), 8.27 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.55 (d, J = 6.0 Hz, 1H), 4.12 – 4.05 (m, 5H), 3.80 – 3.73 (m, 2H), 3.44 – 3.37 (m, 2H), 3.25 – 3.12 (m, 4H), 2.97 – 2.85 (m, 1H), 2.44 (s, 3H), 1.35 (d, J = 6.5 Hz, 3H).
Example 404 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(2,7-dimethyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000586_0001
Step 1: Preparation of 2,7-dimethyl-6-nitro-[1,2,4]triazolo[1,5-a]pyridine. [01133] To a mixture of 2-chloro-4-methyl-5-nitropyridine (25 g, 145.35 mmol) and 5- methyl-1,3,4-thiadiazol-2-amine (25.07g, 218.03 mmol) in Tol (250 mL) was added DIEA (29.36 mg, 290.70 mmol). The mixture was stirred at 140 oC for 72 h in sealed tube. The mixture was diluted with EA (250 mL) and water (250 mL) and the organic phase separated. The aqueous phase was further extracted with DCM (2 x 250mL). The organic phase was washed with brine (250 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (3.6 g, 12.93%) as a yellow solid. ESI-MS (M+H) +: 193.5.1H NMR (400 MHz, DMSO-d6) δ 9.91 (s, 1H), 7.86 (s, 1H), 2.70 (s, 3H), 2.58 (s, 3H). Step 2: Preparation of 2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine. [01134] To a mixture of 2,7-dimethyl-6-nitro-[1,2,4]triazolo[1,5-a]pyridine (3.6 g, 18.75 mmol) and Raney-Ni (20 mL) in MeOH (40 mL). The mixture was stirred at rt for 16 h under H2. The mixture was filtered, washed with MeOH and the filtrate was concentrated in vacuo to give title product (2.5 g, 82.30 %) as a black solid. ESI-MS (M+H)+:163.5. Step 3: Preparation of tert-butyl 3-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01135] To a mixture of 2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (150 mg, 0.93 mmol), tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1] octane-8-carboxylate (305.56 mg, 0.93 mmol) in THF (10 mL) were added TEA (281.79 mg, 2.79 mmol) and triphosgene (550.56 mg, 1.86 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 16.61%) as a white solid. ESI-MS (M+H) +: 519.3. Step 4: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(2,7-dimethyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01136] A mixture of tert-butyl 3-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (80 mg, 0.15 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (10 mg, 13.47%) as a white solid. ESI-MS (M+H) +:419.1.1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 9.38 (s, 1H), 8.22 (s, 1H), 7.88 (d, J = 6.0 Hz, 1H), 7.60 (s, 1H), 6.45 (d, J = 6.2 Hz, 1H), 4.01 – 3.96 (m, 2H), 3.57 – 3.53 (m, 2H), 3.51 – 3.47 (m, 2H), 3.21 – 3.17 (m, 2H), 3.05 – 3.00 (m, 2H), 2.49 (s, 3H), 2.42 (s, 3H), 1.76 – 1.68 (m, 4H).
Example 405 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(6-fluoro-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000588_0001
Compound 405 Step 1: Preparation of tert-butyl 3-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8-carboxylate. [01137] To a solution of 6-fluoro-2-methyl-2H-indazol-5-amine hydrochloride (109 mg, 0.54 mmol) and TEA (551 mg, 5.45 mmol) in THF (15 mL) was added triphosgene (161 mg, 0.54 mmol) at 0oC, after 10 min, tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-3,8-diazabicyclo[3.2.1]octane-8-carboxylate (150 mg, 0.45 mmol) was added to the mixture at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (40 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (80 mg, 33.79 %) as a white solid. ESI-MS (M+H) +:522.2. Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(6-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01138] To a mixture of tert-butyl 3-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (70 mg, 0.13 mmol) in EA (1 mL) was added HCl/EA (4 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (40 mg, Y: 70.72 %) as a white solid. ESI-MS (M+H) +:422.21H NMR (400 MHz, DMSO-d6) δ 12.03 (d, J = 2.6 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 8.24 (s, 1H), 7.88 (d, J = 6.0 Hz, 1H), 7.44 (d, J = 12.2 Hz, 1H), 6.48 (d, J = 6.1 Hz, 1H), 4.12 (s, 3H), 4.02 – 3.98 (m, 2H), 3.86 – 3.82 (m, 2H), 3.59 – 3.54 (m, 2H), 3.20 – 3.10 (m, 4H), 1.86 (s, 4H). Example 406 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000589_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01139] A mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (2 g, 6.02 mmol), 6-fluoro-2-methyl-2H-indazol-5- amine (1.99 g, 12.05 mmol), triphosgene (3.58 g, 12.05 mmol) and TEA (7.29 g, 72.24 mmol) in THF (200 mL) was stirred at 0 oC for 15 min. Then The mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at rt for 1 h. The precipitate was filtered. The crude was diluted with MeOH, stirred at rt for 1 h. The precipitate was filtered to afford title product (1.3 g, 41.29 %) as a white solid. ESI-MS (M+H) +: 524.3.1H NMR (400 MHz, CDCl3) δ 12.05 (d, J = 2.7 Hz, 1H), 8.54 (d, J = 7.7 Hz, 1H), 7.97 (d, J = 5.9 Hz, 1H), 7.82 (s, 1H), 7.34 (d, J = 11.8 Hz, 1H), 6.39 (d, J = 6.0 Hz, 1H), 4.30 – 4.25 (m, 2H), 4.22 – 4.16 (m, 5H), 3.44 (d, J = 12.2 Hz, 2H), 3.15 (t, J = 8.6 Hz, 2H), 3.00 (dd, J = 12.1, 4.2 Hz, 2H), 1.50 (s, 9H), 1.37 (d, J = 6.8 Hz, 6H). Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01140] A mixture of tert-butyl (2R,6S)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (1.3 g, 2.48 mmol) in 4M HCl / EA (20 mL) was stirred at RT for 2 h. The precipitate was filtered diluted with water (20 mL), adjusted pH to 7~8 by 1N Na2CO3, the precipitate was filtered and dried to give title product (932.17 g, 88.86 %) as a pink solid. ESI-MS (M+H) +:424.2.1H NMR (400 MHz, DMSO-d6) δ 12.05 (d, J = 2.7 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 7.85 (d, J = 6.1 Hz, 1H), 7.44 (d, J = 12.2 Hz, 1H), 6.50 (d, J = 6.2 Hz, 1H), 4.11 (s, 3H), 3.99 (t, J = 8.5 Hz, 2H), 3.60 (d, J = 11.6 Hz, 2H), 3.13 (t, J = 8.5 Hz, 2H), 2.84 – 2.76 (m, 2H), 2.38 (t, J = 11.3 Hz, 2H), 1.00 (d, J = 6.2 Hz, 6H). Example 407 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000590_0001
Step 1: Preparation of (E)-N'-(5-bromo-4-methoxypyridin-2-yl)-N,N- dimethylformimidamide. [01141] To a mixture of 5-bromo-4-methoxypyridin-2-amine (50.0 g, 246.31 mmol) in MeOH (500 mL) was added DMF-DMA (38.1 g, 320.20 mmol). The mixture was stirred at 75oC for 3 h. The mixture was concentrated in vacuo and the residue was diluted with water (500 mL) and the precipitate was filtered and concentrated in vacuo to get title product (50.0 g, Y: 78.8%) as a brown solid. ESI-MS (M+H)+:260.1.1H NMR (400 MHz, DMSO-d6) δ 12.49 (s, 1H), 8.05 (s, 1H), 6.41 (s, 1H), 3.96 (s, 3H), 3.32 (s, 6H). Step 2: Preparation of 6-bromo-7-methoxy-[1,2,4]triazolo[1,5-a]pyridine. [01142] To a mixture of (E)-N'-(5-bromo-4-methoxypyridin-2-yl)-N,N- dimethylformimidamide (50 g, 193.80 mmol) in MeOH: pyridine (v: v= 10: 1, 550 mL) was added (aminooxy)sulfonic acid (32.8 g, 290.70 mmol). The mixture was stirred at r.t for 16 h. The mixture was quenched with NaHCO3 (aq) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo to get title product (12 g, Y: 27.2%) as a brown solid. ESI-MS (M+H)+:228.0. Step 3: Preparation of N-(7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [01143] To a mixture of 6-bromo-7-methoxy-[1,2,4]triazolo[1,5-a]pyridine (12.0 g, 52.63 mmol) in 1,4-dioxane (150 mL) were added diphenylmethanimine (14.3 g, 78.95 mmol), BINAP (6.6 g, 10.53 mmol), Pd2(dba)3 (2.4 g, 2.63 mmol) and Cs2CO3 (34.3 g, 105.26 mmol). The mixture was stirred at 100oC for 16 h under nitrogen atmosphere. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 1) to get title product (2.0 g, Y: 11.6%) as a brown solid. ESI-MS (M+H)+:329.4.1H NMR (400 MHz, DMSO-d6) δ 8.82 (d, J = 7.6 Hz, 1H), 8.71 (s, 1H), 8.69 (s, 1H), 7.96 (d, J = 6.1 Hz, 2H), 7.87 (d, J = 5.8 Hz, 2H), 7.15 (dd, J = 7.4, 2.2 Hz, 2H), 6.56 (d, J = 6.2 Hz, 2H), 6.51 (d, J = 5.9 Hz, 2H), 3.60 (s, 3H). Step 4: Preparation of 7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6-amine HCl salt. [01144] To a mixture of N-(7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (2.0 g, 6.10 mmol) in EA (20 mL) was added 4 M HCl/EA (20 mL). The mixture was stirred at r.t for 2 h. The mixture was filtered and the residue was diluted with EA (10 mL). The mixture was stirred at r.t for 2 h and filtered to get title product (700 mg, Y: 70.0%) as a white solid. ESI-MS (M+H)+:165.1. Step 5: Preparation of tert-butyl (2R,6S)-4-(1-((7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01145] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) in THF (5 mL) were added TEA (91 mg, 0.90 mmol), triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 1 h. The mixture was added 7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6-amine (59 mg, 0.36 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and the precipitate was filtered and concentrated in vacuo to get title product (60 mg, Y: 38.2 %) as a brown solid. ESI-MS (M+H) +:523.4.1H NMR (400 MHz, DMSO-d6) δ 8.03 – 8.00 (m, 1H), 7.93 (d, J = 8.1 Hz, 1H), 7.44 – 7.40 (m, 1H), 7.33 – 7.30 (m, 1H), 6.70 (d, J = 8.4 Hz, 1H), 4.10 (s, 3H), 4.04 – 3.93 (m, 2H), 3.62 – 3.58 (m, 2H), 3.44 – 3.38 (m, 2H), 3.22 – 3.18 (m, 1H), 3.09 – 2.98 (m, 2H), 2.89 – 2.85 (m, 1H), 1.43 (s, 9H), 1.29 – 1.25 (m, 6H). Step 6: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01146] To a solution of tert-butyl (2R,6S)-4-(1-((7-methoxy-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (9 mg, 20.4 %) as a white solid. ESI-MS (M+H)+:423.2. 1H NMR (400 MHz, MeOD-d4) δ 9.37 (s, 1H), 8.49 (s, 1H), 8.13 (s, 1H), 7.77 (d, J = 5.8 Hz, 1H), 7.00 (s, 1H), 6.35 (d, J = 5.9 Hz, 1H), 4.09 (s, 3H), 4.01 (t, J = 8.4 Hz, 2H), 3.74 (d, J = 12.7 Hz, 2H), 3.43 – 3.37 (m, 2H), 3.05 (t, J = 8.4 Hz, 2H), 2.83 – 2.76 (m, 2H), 1.36 (d, J = 6.4 Hz, 6H).
Example 408 – Preparation of (R)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000593_0001
Step 1: Preparation of N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-1,1- diphenylmethanimine. [01147] To a mixture of 7-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyridine (800 mg, 3.77 mmol) in 1,4-dioxane (10 mL) were added diphenylmethanimine (1.0 g, 5.66 mmol), BINAP (235 mg, 0.38 mmol), Pd2(dba)3 (173 mg, 0.19 mmol) and Cs2CO3 (2.5 g, 7.55 mmol). The mixture was stirred at 100oC for 16 h under N2. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3), the organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 1) to get title product (600 mg, Y: 51.0%) as a brown solid. ESI-MS (M+H)+:313.4.1H NMR (400 MHz, DMSO-d6) δ 8.58 (dd, J = 7.2, 0.5 Hz, 1H), 7.70 (d, J = 7.3 Hz, 2H), 7.59 (t, J = 7.3 Hz, 1H), 7.50 (t, J = 7.5 Hz, 2H), 7.37 – 7.32 (m, 3H), 7.28 – 7.24 (m, 2H), 6.85 (d, J = 1.6 Hz, 1H), 6.64 (dd, J = 7.2, 2.1 Hz, 1H), 2.35 (s, 3H). Step 2: Preparation of 2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-amine HCl salt. [01148] To a mixture of N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-1,1- diphenylmethanimine (600 mg, 1.92 mmol) in EA (5 mL) was added 4 M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered and the residue was diluted with EA (5 mL). The mixture was stirred at r.t for 2 h and filtered to get title product (250 mg, Y: 87.8%) as a white solid. ESI-MS (M+H)+:149.5. Step 3: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01149] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (5 mL) were added TEA (114 mg, 1.13 mmol), triphosgene (112 mg, 0.31 mmol) at 0oC. The mixture was stirred at r.t for 1 h. The mixture was added 2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-amine HCl salt (59 mg, 0.31 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:2) to give the title compound (80 mg, Y: 52.5 %) as a yellow solid. ESI-MS (M+H) +:493.4.1H NMR (400 MHz, DMSO-d6) δ 9.09 (s, 1H), 7.84 (s, 1H), 7.77 (d, J = 6.2 Hz, 1H), 7.70 (s, 1H), 6.40 (d, J = 6.3 Hz, 1H), 3.98 – 3.94 (m, 2H), 3.72 – 3.69 (m, 2H), 3.59 – 3.56 (m, 2H), 3.55 – 3.53 (m, 2H), 3.30 – 3.28 (m, 3H), 2.35 (s, 3H), 1.43 (s, 9H), 1.38 (d, J = 6.3 Hz, 3H). Step 4: Preparation of (R)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01150] To a solution of tert-butyl (R)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (70 mg, 0.14 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (28.2 mg, 45.3 %) as a yellow solid. ESI-MS (M+H)+:393.2.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 8.70 (d, J = 7.3 Hz, 1H), 8.24 (s, 1H), 7.98 (d, J = 1.9 Hz, 1H), 7.94 (d, J = 6.1 Hz, 1H), 7.14 (dd, J = 7.4, 2.2 Hz, 1H), 6.56 (d, J = 6.2 Hz, 1H), 4.00 – 3.97 (m, 2H), 3.66 – 3.62 (m, 2H), 3.14 (t, J = 8.5 Hz, 2H), 3.04 – 2.99 (m, 1H), 2.95 – 2.87 (m, 2H), 2.86 – 2.80 (m, 1H), 2.63 – 2.57 (m, 1H), 2.41 (s, 3H), 1.07 (d, J = 6.3 Hz, 3H).
Example 409 – Preparation of (R)-N-(2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000595_0001
Step 1: Preparation of 5-nitro-2H-benzo[d][1,2,3]triazole. [01151] To a mixture of 4-nitrobenzene-1,2-diamine (5.0 g, 32.68 mmol) in H2O (100 mL) were added NaNO2 (11.30 g, 163.4 mmol) and HOAc (30 mL) at 0 °C. The reaction mixture was stirred at rt for 1 h. The mixture was diluted with water (100 mL) and extracted with EA (300 mL*3). The combined organic layer was washed with brine (100 mL), dried over sodium sulfate, filtered and concentrated in vacuum to give the title compound (4.2 g, crude) as a yellow solid. ESI-MS (M+H) +:165.0. Step 2: Preparation of 2-methyl-5-nitro-2H-benzo[d][1,2,3]triazole. [01152] To a solution of 5-nitro-2H-benzo[d][1,2,3]triazole (4.20 g, 25.60 mmol) in EtOH (50 mL) were added EtONa (3.18 g, 46.80 mmol) and MeI (7.27 g, 51.20 mmol). The mixture was reacted at 80˚C under N2 for 16 h. LCMS showed the reaction was completed. The reaction mixture was quenched by water (60 mL). The mixture was extracted with Ethyl acetate (300 ml x 3). The organic phase was washed with brine (60 mL), dried over Na2SO4 and filtered. The filtrate was concentrated in vacuum. The crude was purified by silica gel column chromatography (PE/EA=10:1) to give the title compound (1.10 g, Y: 24 %) as a yellow solid. ESI-MS (M+H) +:179.0. Step 3: Preparation of 2-methyl-2H-benzo[d][1,2,3]triazol-5-amine. [01153] To a solution of 2-methyl-5-nitro-2H-benzo[d][1,2,3]triazole (1.0 g, 5.62 mmol) in EtOH (10 mL) were added Fe (1.57 g, 28.10 mmol), NH4Cl (1.21 g, 22.48 mmol) and H2O (2.0 mL), the reaction was stirred at 80 °C for 16 h. The mixture was filtered to remove solid residue. The filtrate was concentrated under reduced pressure and extracted with EA (100 mL). The organic phase was separated, dried over anhydrous Na2SO4, filtered, and evaporated. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (700 mg, Y: 84 %) as a yellow solid. ESI-MS (M+H) +:149.1. Step 4: tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01154] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (5 mL) were added 2- methyl-2H-benzo[d][1,2,3]triazol-5-amine (55 mg, 0.37 mmol), TEA (156 mg, 1.55 mmol) and Triphosgene (92 mg, 0.31 mmol), the reaction was stirred at rt for 16 h. The reaction mixture was quenched by water (10 mL). The mixture was filtered to give title product (100 mg, crude) as a yellow solid. ESI-MS (M+H) +:493.3. Step 5: Preparation of (R)-N-(2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01155] To a solution of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (45 mg, 0.09 mmol) in DCM (2.0 mL) was added TFA (0.60 mL) at rt. The reaction mixture was stirred at rt for 2 h. The precipitate was filtered and purified by prep-HPLC (10 mmol/L NH4HCO3 in water / ACN) to give title compound (14.37 mg, Y: 40 %) as a white solid. ESI-MS (M+H)+:393.4.1H NMR (400 MHz, DMSO- d6) δ 12.13 (s, 1H), 8.26 (d, J = 1.2 Hz, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.85 (d, J = 9.2 Hz, 1H), 7.36 (dd, J = 9.2, 2.0 Hz, 1H), 6.52 (d, J = 6.4 Hz, 1H), 4.44 (s, 3H), 4.04 – 3.94 (m, 2H), 3.61 – 3.53 (m, 2H), 3.16 – 3.08 (m, 2H), 2.94 – 2.88 (m, 1H), 2.83 – 2.70 (m, 3H), 2.48 – 2.42 (m, 2H), 1.00 (d, J = 6.4 Hz, 3H).
Example 410 – Preparation of (R)-N-(2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000597_0001
Step 1: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01156] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (120 mg, 0.37 mmol), 2-methyl-2H-indazol-5-amine (66 mg, 0.45 mmol) in THF (20 mL) were added TEA (748 mg, 7.40 mmol) and triphosgene (132 mg, 0.45 mmol) (in THF ( 1 mL)) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (50 mL) and stirred at r.t for 20 min. The precipitate was filtered, washed with water (20 mL) and dried to give title product (70 mg, yield: 39 %) as a white solid. ESI-MS (M+H) +:492.3. Step 2: Preparation of (R)-N-(2-methyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01157] To a mixture of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O/ ACN) to give title compound (28.29 mg, 65 %) as a white solid. ESI-MS (M+H) +:392.1.1H NMR (400 MHz, MeOD-d4) δ 8.40 (s, 1H), 8.10 (s, 1H), 8.01 (dd, J = 11.3, 3.7 Hz, 2H), 7.56 (d, J = 9.2 Hz, 1H), 7.29 (dd, J = 9.2, 2.0 Hz, 1H), 6.59 (d, J = 6.1 Hz, 1H), 4.18 (s, 3H), 4.14 – 4.06 (m, 2H), 3.84 – 3.74 (m, 2H), 3.49 – 3.42 (m, 2H), 3.28 – 3.12 (m, 4H), 3.01 – 2.91 (m, 1H), 1.37 (d, J = 6.6 Hz, 3H). Example 411 – Preparation of (R)-N-(7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000598_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01158] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 7-methoxy-[1,2,4]triazolo[1,5- a]pyridin-6-amine (78 mg, 0.47 mmol) and TEA (712 mg, 7.05 mmol) in THF (12 mL) was added triphosgene (209 mg, 0.71 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:4) to give title product (90 mg, Y: 37.7%) as a yellow solid. ESI-MS (M+H) +: 509.3. Step 2: Preparation of (R)-N-(7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01159] A mixture of tert-butyl (R)-4-(1-((7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (70 mg, 0.14 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03 %TFA in water / CH3CN) to give title product (46 mg, Y: 82.1 %) as a yellow solid. ESI-MS (M+H) +: 409.1.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.47 (s, 1H), 9.21 – 9.90 (m, 2H), 8.29 (s, 1H), 8.02 (d, J = 6.0 Hz, 1H), 7.36 (s, 1H), 6.64 (d, J = 6.1 Hz, 1H), 4.11 (s, 3H), 4.06 – 4.01 (m, 2H), 3.82 – 3.75 (m, 2H), 3.43 – 3.34 (m, 2H), 3.24 – 3.13 (m, 4H), 3.02 – 2.94 (m, 1H), 1.27 (d, J = 6.5 Hz, 3H). Example 412 – Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-methoxy- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000599_0001
Compound 412 Step 1: Preparation of tert-butyl 3-(1-((7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate. [01160] To a mixture of tert-butyl 3-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8- diazabicyclo[3.2.1]octane-8-carboxylate (100 mg, 0.30 mmol), 7-methoxy- [1,2,4]triazolo[1,5-a]pyridin-6-amine (74 mg, 0.45 mmol) in THF (20 mL) were added TEA (303 mg, 3.0 mmol) and triphosgene (132 mg, 0.45 mmol) (in THF ( 1 mL)) at 0 ℃. The reaction mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (50 mL) and stirred at r.t for 20 min. The precipitate was filtered, washed with water (20 mL) and dried to give title product (98 mg, yield: 62 %) as a white solid. ESI-MS (M+H) +:521.2. Step 2: Preparation of 4-(3,8-diazabicyclo[3.2.1]octan-3-yl)-N-(7-methoxy- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01161] To a mixture of tert-butyl 3-(1-((7-methoxy-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-3,8-diazabicyclo[3.2.1]octane-8- carboxylate (98 mg, 0.19 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title compound (60 mg, 69 %) as a white solid.
Figure imgf000599_0002
δ 12.41 (s, 1H), 9.47 (s, 1H), 8.25 (d, J = 3.2 Hz, 2H), 7.92 (d, J = 6.1 Hz, 1H), 7.34 (s, 1H), 6.46 (d, J = 6.2 Hz, 1H), 4.09 (s, 3H), 4.03 – 3.95 (m, 2H), 3.59 – 3.55 (m, 2H), 3.52 – 3.48 (m, 2H), 3.21 – 3.16 (m, 2H), 3.06 – 3.01 (m, 2H), 1.78 – 1.69 (m, 4H). Example 413 – Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000600_0001
Step 1: Preparation of tert-butyl 7-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [01163] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.61 mmol), 6-fluoro-2-methyl-2H-indazol-5- amine (145 mg, 0.73 mmol), triphosgene (208 mg, 0.73 mmol) and TEA (737 mg, 7.27 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at r.t for 1 h. The precipitate was filtered to afford title product (90 mg, 57.3%) as a white solid. ESI-MS (M+H) +: 522.3.1H NMR (400 MHz, CDCl3) δ 12.06 (d, J = 2.9 Hz, 1H), 8.53 (d, J = 7.7 Hz, 1H), 7.94 (d, J = 6.0 Hz, 1H), 7.81 (s, 1H), 7.34 (d, J = 11.8 Hz, 1H), 6.31 (d, J = 6.0 Hz, 1H), 4.17 (s, 3H), 3.78 – 3.67 (m, 4H), 3.27 – 3.24 (m, 2H), 3.08 – 3.04 (m, 4H), 1.48 (s, 9H), 1.08 (t, J = 6.3 Hz, 2H), 0.86 – 0.83 (m, 2H). Step 2: Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01164] A mixture of tert-butyl 7-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (80 mg, 0.15 mmol) in 4M HCl /EA (2 mL) was stirred at RT for 2 h. [01165] The precipitate was filtered and dried in vacuo to give title product (58.33 mg, yield: 85.09 %) as a white soild. ESI-MS (M+H) +: 422.2.1H NMR (400 MHz, MeOD-d4) δ 8.42 (s, 1H), 7.98 (d, J = 7.4 Hz, 1H), 7.78 (d, J = 7.4 Hz, 1H), 7.41 (d, J = 10.7 Hz, 1H), 6.90 (d, J = 7.4 Hz, 1H), 4.39 (t, J = 8.4 Hz, 2H), 4.25 (s, 3H), 4.06 – 4.02 (m, 2H), 3.85 (s, 2H), 3.57 – 3.50 (m, 4H), 1.23 – 1.19 (m, 2H), 1.16 – 1.12 (m, 2H). Example 414 – Preparation of (R)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000601_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1-carboxylate. [01166] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate (80 mg, 0.24 mmol), 6-fluoro-2-methyl-2H- indazol-5-amine (72.2 mg, 0.36 mmol), triphosgene (106.9 mg, 0.36 mmol) and TEA (362.6 mg, 3.59 mmol) in THF (8 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at r.t for 1 h. The precipitate was filtered to afford title product (90 mg, 56.6%) as a white solid. ESI-MS (M+H) +: 526.3. Step 2: Preparation of (R)-N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01167] A mixture of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1- carboxylate (80 mg, 0.15 mmol) in 4M HCl /EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (17.53 mg, yield: 24.78 %) as a white soild. ESI-MS (M+H) +: 426.0.1H NMR (400 MHz, DMSO-d6) δ 12.04 (d, J = 2.7 Hz, 1H), 8.43 (d, J = 7.9 Hz, 1H), 8.30 (s, 1H), 8.20 (s, 1H), 7.88 (d, J = 6.1 Hz, 1H), 7.44 (d, J = 12.2 Hz, 1H), 6.50 (d, J = 6.2 Hz, 1H), 4.12 (s, 3H), 3.99 (t, J = 8.8 Hz, 2H), 3.71 – 3.69 (m, 1H), 3.61 (s, 1H), 3.38 – 3.37 (m, 2H), 3.15 – 3.11 (m, 2H), 2.98 (d, J = 11.5 Hz, 1H), 2.92 – 2.86 (m, 1H), 2.81 – 2.76 (m, 2H), 2.64 – 2.58 (m, 1H). Example 415 – Preparation of (R)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3- (hydroxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000602_0001
Compound 415 Step 1: Preparation of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1-carboxylate. [01168] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate (80 mg, 0.24 mmol), 2,6-dimethyl-2H-indazol-5- amine (70.78 mg, 0.36 mmol), triphosgene (107 mg, 0.36 mmol) and TEA (362.6 mg, 3.59 mmol) in THF (8 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at r.t for 1 h. The precipitate was filtered to afford title product (130 mg, crude) as a yellow solid. ESI-MS (M+H) +: 522.3. Step 2: Preparation of (R)-N-(2,6-dimethyl-2H-indazol-5-yl)-4-(3-(hydroxymethyl)piperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01169] A mixture of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1-carboxylate (120 mg, 0.23 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (12.43 mg, yield: 10.1 %) as a yellow solid. ESI-MS (M+H) +: 422.2.1H NMR 1H NMR (400 MHz, DMSO-d6) δ 11.51 (s, 1H), 9.14 (s, 1H), 8.76 (s, 1H), 8.20 (s, 2H), 7.94 (d, J = 5.3 Hz, 1H), 7.45 (s, 1H), 6.63 (s, 1H), 4.11 (s, 3H), 4.08 – 4.01 (m, 2H), 3.90 – 3.78 (m, 2H), 3.73 – 3.68 (m, 1H), 3.65 – 3.60 (m, 1H), 3.38 – 3.30 (m, 2H), 3.23 – 3.07 (m, 5H), 2.43 (s, 3H). Example 416 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000603_0001
Compound 416 Step 1: Preparation of tert-butyl 4-(1-((6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01170] To a solution of 6-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7- carboxylic acid (75 mg, 0.36 mmol) in toluene (10 mL) were added TEA (146 mg, 1.44 mmol), DPPA (297 mg, 1.08 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. The tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (120 mg, 0.36 mmol) was added to the solution and stirred at 90 o C for 16 h. The precipitate was filtered, washed with toluene (5 mL) and dried to give title product (70 mg, yield: 36 %) as a white solid. ESI-MS (M+H) +:537.4.1H NMR (400 MHz, CDCl3) δ 12.57 (s, 1H), 8.59 (s, 1H), 7.99 (s, 1H), 7.85 (d, J = 6.0 Hz, 1H), 6.23 (d, J = 6.2 Hz, 1H), 4.18 – 4.13 (m, 2H), 3.99 (s, 3H), 3.81 – 3.77 (m, 2H), 3.58 – 3.54 (m, 2H), 3.45 (s, 2H), 3.30 – 3.23 (m, 2H), 2.53 (s, 3H), 1.50 (s, 9H), 1.45 (s, 6H). Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01171] To a solution of tert-butyl 4-(1-((6-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (50 mg, 0.093 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O/ ACN) to give title product (26.12 mg, 58%) as a white solid. ESI-MS (M+H) +: 437.3.1H NMR (400 MHz, MeOD-d4) δ 8.44 (s, 2H), 8.27 (s, 1H), 7.98 (d, J = 5.9 Hz, 1H), 6.56 (d, J = 6.0 Hz, 1H), 4.13 – 4.03 (m, 5H), 3.48 – 3.42 (m, 2H), 3.38 – 3.34 (m, 2H), 3.26 (s, 2H), 3.20 – 3.13 (m, 2H), 2.44 (s, 3H), 1.46 (s, 6H). Example 417 – Preparation of N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-6- (piperazin-1-yl)-1,5-naphthyridine-2-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000604_0001
Step 1: Preparation of 4-bromo-5-methoxy-2-nitroaniline. [01172] To a solution of 5-methoxy-2-nitroaniline (15 g, 89.29 mmol) in ACN (200 mL) was added NBS (16 g, 89.29 mmol). The mixture was stirred at 70 oC for 16 h under N2, the reaction was concentrated and purified by SGC (PE/EA=0-100%) to give product (16 g, yield: 72.73 %) as yellow solid. ESI-MS (M+H) + : 246.9. Step 2: Preparation of 4-bromo-5-methoxybenzene-1,2-diamine. [01173] To a solution of 4-bromo-5-methoxy-2-nitroaniline (15 g, 60.75 mmol) in EtOH (300 mL) and H2O (60 mL) were added NH4Cl (24 g, 455.70 mmol) and Fe (34.5 g, 60.75 mmol). The mixture was stirred at 90 oC for 4 h under N2, the reaction was concentrated and purified by SGC (PE/EA=0-100%) to give product (5.1 g, yield: 38.72 %) as yellow solid. ESI-MS (M+H) +: 217.1. Step 3: Preparation of 5-bromo-6-methoxy-2H-benzo[d][1,2,3]triazole. [01174] To a solution of 4-bromo-5-methoxybenzene-1,2-diamine (4 g, 17.56 mmol) in AcOH (4 mL) and H2O (16 mL) was added NaNO2 (6 g, 87.85 mmol). The mixture was stirred at r.t for 1 h under N2, the reaction was concentrated and purified by SGC (PE/EA=0- 100%) to give product (3.1 g, yield: 73.81 %) as yellow solid. ESI-MS (M+H) +: 228.0. Step 4: Preparation of 5-bromo-6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazole. [01175] To a solution of 5-bromo-6-methoxy-2H-benzo[d][1,2,3]triazole (3 g, 13.17 mmol) in Toluene (30 mL) was added DMF-DMA (2.4 g, 19.77 mmol). The mixture was stirred at 100 oC for 2 h under N2, the reaction was concentrated and purified by SGC (PE/EA=0-100%) to give product (850 mg, yield: 33.07 %) as yellow solid. ESI-MS (M+H) +: 244.1. Step 5: Preparation of N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01176] To a solution of 5-bromo-6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazole (1 g, 4.10 mmol) in 1,4-Dioxane (50 mL) was added diphenylmethanimine (8 g, 4.90 mmol) and Pd2(dba)3 (400 mg, 0.40 mmol), Xantphos (480 mg, 0.80 mmol) and Cs2CO3 (4 g, 12.30 mmol). The mixture was stirred at 110 oC for 5 h under N2, the reaction was concentrated and purified by SGC (PE/EA=0-100%) to give product (510 mg, yield: 36.17 %) as yellow solid. ESI-MS (M+H) +: 343.1. Step 6: Preparation of 6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine. [01177] To a solution of N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (500 mg, 1.45 mmol) in MeOH (20 mL) was added NH2OHHCl (515 mg, 7.25 mmol) and NaOAc (72 mg, 4.35 mmol). The mixture was stirred at rt for 3 h under N2, the reaction was concentrated and purified by SGC (DCM/MeOH=0-100%) to give product (115 mg, yield: 44.23 %) as yellow solid. ESI-MS (M+H) +: 179.2. Step 7: Preparation of tert-butyl (R)-4-(1-((6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01178] To a solution of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.32 mmol) and Et3N in THF (10 mL) was added TBC (126 mg, 0.42 mmol) at 0 oC. The mixture was stirred at 0 oC for 1 h under N2, and tert- butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (86 mg, 0.48 mmol) was added to the above mixture and stirred at r.t for 16 h. The reaction was concentrated and purified by SGC (DCM/MeOH=0-100%) to give product (80 mg, yield: 48.78 %) as yellow solid. ESI-MS (M+H) +: 523.4. Step 8: Preparation of (R)-N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01179] To a solution of tert-butyl (R)-4-(1-((6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (75 mg, 0.14 mmol) in EA (2 mL) was added 3M HCl / EA (2 mL). The mixture was stirred at r.t for 2 h under N2. The residue was purified by prep- HPLC (0.1 % TFA in water / CH3CN) to give title product (24.23 mg, yield: 14.26 %) as a yellow solid. ESI-MS (M+H) +: 423.2.1H NMR (400 MHz, CD3OD-d4) δ 8.55 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.19 (s, 1H), 6.61 (d, J = 6.0 Hz, 1H), 4.39 (s, 3H), 4.14 (t, J = 8.4 Hz, 2H), 4.05 (s, 3H), 3.93 – 3.78 (m, 2H), 3.56 – 3.42 (m, 2H), 3.27 (t, J = 9.2 Hz, 2H), 3.19 (t, J = 8.4 Hz, 2H), 3.04 (dd, J = 13.6, 10.4 Hz, 1H), 1.39 (d, J = 6.8 Hz, 3H). Example 418 – Preparation of (R)-N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000606_0001
Step 1: Preparation of 6-bromo-2-methylimidazo[1,2-a]pyrimidine. [01180] To a mixture of 5-bromopyrimidin-2-amine (15 g, 86.71 mmol) in IPA (150 mL) were added 1-bromo-2,2-dimethoxypropane (17.26 g, 95.38 mmol) and PPTS (51.40 g, 104.05 mmol). The mixture was stirred at 85oC for 16 h. The mixture was concentrated in vacuo, the residue was diluted in water (200 mL), adjusted pH to 11 by sat. Na2CO3, the precipitate was filtered and dried to get title product (9 g, Y: 49.43%) as a white solid. ESI- MS (M+H) +:214.4. Step 2: Preparation of N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-1,1-diphenylmethanimine. [01181] To a mixture of 6-bromo-2-methylimidazo[1,2-a]pyrimidine (9.0 g, 42.65 mmol), diphenylmethanimine (11.64 g, 63.98 mmol) and BINAP (5.31 g, 8.53 mmol) in 1,4- dioxane (100 mL) were added Cs2CO3 (27.81 g, 85.3 mmol) and Pd(OAc)2 (965.02 mg, 4.27 mmol). The mixture was stirred at 115 oC for 16 h under N2. The mixture was diluted with H2O (100 mL) and extracted with EA (100 mL x 3). The organic phase was washed with brine (100 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (6 g, 45.09%) as a brown solid. ESI-MS (M+H) +:313.3. Step 3: Preparation of 2-methylimidazo[1,2-a]pyrimidin-6-amine hydrochloride. [01182] A mixture of N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-1,1- diphenylmethanimine (6 g, 19.23 mmol) in 4M HCl/EA (60 mL) was stirred at rt for 2 h. The reaction was diluted with EA (60 mLx2), the precipitate was filtrated and dired in vacuo to give title product (3.5 g, 98.91%) as a brown solid. ESI-MS (M+H+): 149.3. Step 4: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01183] To a mixture of 2-methylimidazo[1,2-a]pyrimidin-6-amine hydrochloride (150 mg, 0.82 mmol), (267.12 mg, 0.84 mmol) in THF (10 mL) were added TEA (248.46 mg, 2.46 mmol) and triphosgene (487.08 mg, 1.64 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 14.87%) as a brown solid. ESI-MS (M+H) +: 493.3. Step 5: Preparation of (R)-N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01184] A mixture of tert-butyl (R)-2-methyl-4-(1-((2-methylimidazo[1,2-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg,0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (26 mg, 55.27%) as a yellow solid. ESI-MS (M+H) +:393.2.1H NMR (400 MHz, DMSO-d6) δ 11.93 (s, 1H), 9.28 (d, J = 2.7 Hz, 1H), 8.47 (d, J = 2.7 Hz, 1H), 8.29 (s, 2H), 7.91 (d, J = 6.1 Hz, 1H), 7.69 (s, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.01 – 3.95 (m, 2H), 3.64 – 3.57 (m, 2H), 3.14 (t, J = 8.6 Hz, 2H), 2.99 – 2.78 (m, 3H), 2.59 – 2.51 (m, 2H), 2.34 (s, 3H), 1.04 (d, J = 6.2 Hz, 3H). Example 419 – Preparation of (S)-N-(6-methylimidazo[1,2-a]pyrazin-2-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000608_0001
step 1 step 2
Figure imgf000608_0002
Step 1: Preparation of 6-methylimidazo[1,2-a]pyrazine-2-carbonyl chloride. [01185] To a solution of 6-methylimidazo[1,2-a]pyrazine-2-carboxylic acid (900 mg, 5.08 mmol) in SOCl2 (15 mL) was stirred at 80 ℃ for 16 h.The mixture was concentrated in vacuo to use for the next step. Step 2: Preparation of 6-methylimidazo[1,2-a]pyrazine-2-carbonyl azide. [01186] To a solution of 6-methylimidazo[1,2-a]pyrazine-2-carbonyl chloride (900 mg crude, 4.61 mmol) in acetone:H2O (20 mL:2 mL) was added NaN3 (450 mg, 6.92 mmol), the reaction was stirred at rt for 16 h. The mixture was diluted with EA (150 mL), washed with H2O (100 mL×2) and brine (100 mL), dried over Na2SO4 and filtered. The filtrate was concentrated in vacuo,the crude was purified by silica gel column chromatography (DCM: MeOH = 10: 1) to give the title compound (400 mg, yield: 42 %) as a brown solid. ESI-MS (M+H) +: 203.2. Step 3: Preparation of tert-butyl (S)-2-methyl-4-(1-((6-methylimidazo[1,2-a]pyrazin-2- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01187] To a solution of 6-methylimidazo[1,2-a]pyrazine-2-carbonyl azide (200 mg, 0.99 mmol) and tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (314 mg, 0.99 mmol) in toluene (10 mL) was stirred at 100 ℃ for 16 h. The mixture was concentrated in vacuo and the crude was purified by silica gel column chromatography (DCM: MeOH = 10: 1) to give the title compound (110 mg, yield: 22 %) as a white solid. ESI-MS (M+H) +: 493.2. Step 4: Preparation of (S)-N-(6-methylimidazo[1,2-a]pyrazin-2-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01188] To a solution of tert-butyl (S)-2-methyl-4-(1-((6-methylimidazo[1,2-a]pyrazin- 2-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg,0.18 mmol) in DCM (5 mL) was added TFA (1.5 mL) , the mixture was stirred at rt for 2 h. The mixture was concentrated in vacuo and the crude purified by perp-HPLC (0.1 % TFA in water / CH3CN) to give the title compound (38 mg, 53% yield) as a white solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6) δ 12.23 (s, 1H), 9.17 (s, 1H), 8.88 (s, 1H), 8.82 (s, 1H), 8.51 (s, 1H), 8.20 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 6.67 (d, J = 6.0 Hz, 1H), 4.05 (t, J = 8.0 Hz, 2H), 3.82 (d, J = 12.8 Hz, 2H), 3.39 (d, J = 10.4 Hz, 2H), 3.26 – 3.11 (m, 4H), 3.06 – 2.97 (m, 1H), 2.43 (s, 3H), 1.27 (d, J = 6.4 Hz, 4H).
Example 420 – Preparation of (R)-N-(6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000610_0001
Step 1: Preparation of methyl 2-bromo-5-fluoroisonicotinate. [01189] To a solution 2-bromo-5-fluoroisonicotinic acid (40 g, 181.82 mmol) in MeOH (300 mL) was added H2SO4 (71.27 g, 727.27 mmol) at 0 oC. The mixture was stirred at 70 oC for 16 hours. The mixture was concentrated in vacuo and diluted with water, adjusted pH to 8 by Na2CO3 aqueous solution. The precipitate was filtered, washed with H2O (20 mL) to give title compound (54 g, crude) as a white solid. ESI-MS (M+H)+: 235.9.1H NMR (400 MHz, DMSO-d6) δ 8.67 (d, J = 2.0 Hz, 1H), 7.99 (d, J = 5.2 Hz, 1H), 3.91 (s, 3H). Step 2: Preparation of methyl 2-((diphenylmethylene)amino)-5-fluoroisonicotinate. [01190] A mixture of methyl 2-bromo-5-fluoroisonicotinate (48 g, 206 mmol), Benzenemethanimine (55.93 g, 309 mmol), Pd2(dba)3 (18.87 g, 20.6 mmol) and BINAP (25.67 g, 41.2 mmol) in 1,4-dioxane (600 mL) was purged with N2 for three times at r.t. Then the mixture was stirred at 100 oC for 16 hours. The mixture was cooled to r.t, filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column (PE: EA=20:1) to provide title product (38 g, yield: 55%) as a white solid. ESI-MS (M+H)+: 335.1.1H NMR (400 MHz, DMSO-d6) δ 8.42 (d, J = 2.3 Hz, 1H), 7.71 (d, J = 7.3 Hz, 2H), 7.59 (d, J = 7.3 Hz, 1H), 7.51 (t, J = 7.5 Hz, 2H), 7.39 – 7.31 (m, 3H), 7.18 – 7.13 (m, 2H), 7.12 (d, J = 5.1 Hz, 1H), 3.84 (s, 3H). Step 3: Preparation of methyl 2-amino-5-fluoroisonicotinate HCl salt. [01191] To a solution of methyl 2-((diphenylmethylene)amino)-5-fluoroisonicotinate (38 g, 113.77 mmol) in EtOAc (30 mL) was added 4M HCl/EtOAc (300 mL) at 0 oC. Then the mixture was stirred at r.t for 2 hours. The precipitate was filtered, washed with EtOAc, dried under vacuum to afford title product (20 g, yield: 85%) as a white solid. ESI-MS (M+H)+: 171.1.1H NMR (400 MHz, DMSO-d6) 8.21 (d, J = 3.8 Hz, 1H), 7.20 (d, J = 5.3 Hz, 1H), 3.89 (s, 3H). Step 4: Preparation of 1,2-diamino-5-fluoro-4-(methoxycarbonyl)pyridin-1-ium 2,4,6- trimethylbenzenesulfonate. [01192] To a solution of methyl 2-amino-5-fluoroisonicotinate HCl salt (5 g, 29.41 mmol) in CHCl3 (200 mL) was added O-(mesitylsulfonyl)hydroxylamine (15.8 g, 73.53 mmol) at 0 oC. The mixture was stirred at r.t for 2h. The precipitate was filtered, washed with with CHCl3 (10 mL) to give title compound (5 g, crude) as a white solid.1H NMR (400 MHz, DMSO-d6) δ 8.51 (d, J = 5.2 Hz, 1H), 7.54 (d, J = 6.8 Hz, 1H), 7.24 (d, J = 2.3 Hz, 1H), 7.11 (d, J = 2.3 Hz, 1H), 3.91 (s, 3H), 3.88 (s, 9H). Step 5: Preparation of methyl 6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylate. [01193] To a solution of 1,2-diamino-5-fluoro-4-(methoxycarbonyl)pyridin-1-ium 2,4,6-trimethylbenzenesulfonate (4.5 g, 11.69 mmol) in AcOH (30 mL) was added TsOH (402 mg, 2.34 mmol). The mixture was stirred at 100 oC for 16 hours. The mixture was concentrated in vacuo and the residue was adjusted pH to7 by NaHCO3 aqueous solution. The mixture was extracted with DCM (20 mL*3). The organic layer was concentrated in vacuo. The residue was purified by silica gel column (PE: EA= 1: 1) to give title compound (200 mg, yield: 8%) as a white solid. ESI-MS (M+H)+: 210.1.1H NMR (400 MHz, DMSO- d6) δ 9.38 (d, J = 5.6 Hz, 1H), 8.22 (d, J = 6.7 Hz, 1H), 3.93 (s, 3H), 2.52 (s, 3H). Step 6: Preparation of 6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylic acid. [01194] To a solution of methyl 6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7- carboxylate (150 mg, 0.71 mmol) in THF/MeOH/H2O (5 mL /1 mL /1 mL) was added LiOH (86 mg, 3.57 mmol). The mixture was stirred at r.t for 2 h. The reaction mixture was concentrated in vacuo, the residue was diluted with water (15 mL), adjusted pH = 5 with 2M HCl. The precipitate was filtered, and washed with H2O (5 mL), dried in vacuo to give title product (130 mg, yield: 94%) as a white solid. ESI-MS (M+H)+ : 196.2.1H NMR (400 MHz, DMSO-d6) δ 9.31 (d, J = 5.4 Hz, 1H), 8.14 (d, J = 6.8 Hz, 1H), 2.51 (s, 3H). Step 7: Preparation of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01195] To a solution of 6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridine-7-carboxylic acid (100 mg, 0.31 mmol) in Toluene (10 mL) were added TEA (94 mg, 0.93 mmol) and DPPA (129 mg, 0.47 mmol). The mixture was stirred at 30 oC for 1h. Then the mixture was stirred at 60 oC for another 1h. Tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was allowed to cool down to room temperature. The precipitate was filtered and triturated with MeOH (5 mL) to provide title product (100 mg, yield: 63%) as a white solid. ESI-MS (M+H)+: 511.2.1H NMR (400 MHz, DMSO-d6) δ 12.68 (d, J = 2.5 Hz, 1H), 9.24 (d, J = 5.7 Hz, 1H), 8.37 (d, J = 7.5 Hz, 1H), 7.92 (d, J = 6.0 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.18 (s, 1H), 4.04 (t, J = 8.7 Hz, 2H), 3.78 (d, J = 13.8 Hz, 1H), 3.64 (dd, J = 28.4, 12.7 Hz, 2H), 3.22 – 3.16 (m, 3H), 3.10 (d, J = 9.2 Hz, 1H), 3.01 – 2.91 (m, 1H), 2.41 (s, 3H), 1.42 (s, 9H), 1.18 (d, J = 6.6 Hz, 3H). Step 8: Preparation of (R)-N-(6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01196] To a tert-butyl (R)-4-(1-((6-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (90 mg, 0.18 mmol) in EtOAc (2 mL) was added 4M HCl/EtOAc (6 mL). The mixture was stirred at r.t for 2h. The precipitate was filtered, and washed with EtOAc (5 mL) and lyophilized to give title compound (63 mg, yield: 85%) as a white solid. ESI-MS (M+H)+: 411.0.1H NMR (400 MHz, DMSO-d6) δ 12.88 (s, 1H), 9.69 (d, J = 10.1 Hz, 1H), 9.55 (d, J = 10.8 Hz, 1H), 9.49 (d, J = 5.5 Hz, 1H), 8.48 (d, J = 6.9 Hz, 1H), 7.95 (d, J = 6.1 Hz, 1H), 6.68 (d, J = 6.2 Hz, 1H), 4.06 (t, J = 8.3 Hz, 2H), 3.83 (d, J = 12.1 Hz, 2H), 3.34 (t, J = 11.5 Hz, 3H), 3.21 (t, J = 8.4 Hz, 2H), 3.10 (dd, J = 23.3, 10.1 Hz, 2H), 2.52 (s, 3H), 1.31 (d, J = 6.5 Hz, 3H). Example 421 – Preparation of (S)-3-(5-fluoro-3-methyl-2-oxo-2,3-dihydro-1H- benzo[d]imidazol-1-yl)-7-(3-methylpiperazin-1-yl)quinoxaline-5-carbonitrile TFA salt.
Figure imgf000613_0001
Step 1: Preparation of 4-bromo-5-fluoro-2-nitroaniline. [01197] To a mixture of 5-fluoro-2-nitroaniline (10.0 g, 64.10 mmol) in AcOH (50 mL) was added NBS (11.4 g, 64.10 mmol) under N2 at 25℃, then the reaction was stirred at 110℃ for 1.5 h. The reaction was diluted with EA (100 mL) and washed with water (100 mLx3) and brine (100 mL). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by column flash chromatography (EA/PE=0%~5%) to afford the title product (10.0 g, 66.6 % yield) as a yellow solid. ESI-MS (M+H) +: 235.01H NMR (400 MHz, DMSO-d6) δ 8.25 (d, J = 7.4 Hz, 1H), 7.71 (s, 2H), 6.93 (d, J = 11.0 Hz, 1H). Step 2: Preparation of 4-bromo-5-fluorobenzene-1,2-diamine. [01198] To a solution of 4-bromo-5-fluoro-2-nitroaniline (5.0 g, 21.3 mmol) in EtOH (150 mL) and H2O (30 mL) were added NH4Cl (8.6 g, 160.7 mmol) and Fe (6.0 g, 107.4 mmol). The mixture was stirred at 80℃ for 1 h under N2. The mixture was filtered over celite, washed with EA. The reaction was diluted with EA (100 mL) and washed with water (100 mLx3) and brine (100 mL). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by column flash chromatography (EA/PE=0%~50%) to afford the title product (2.0 g, 46.5 % yield) as a gray solid. ESI-MS (M+H) +:206.0.1H NMR (400 MHz, DMSO-d6) δ 6.65 (d, J = 7.2 Hz, 1H), 6.43 (d, J = 10.8 Hz, 1H), 4.92 (s, 2H), 4.55 (s, 2H). Step 3: Preparation of 5-bromo-6-fluoro-2H-benzo[d][1,2,3]triazole. [01199] To a mixture of 4-bromo-5-fluorobenzene-1,2-diamine (1.0 g, 4.90 mmol) in AcOH (2 mL) and H2O (10 mL) was slowly added NaNO2 (1.7 g, 24.30 mmol) under N2 at 25 ℃, then stirred at 25 ℃ for 1 h. The reaction was diluted with EA (50 mLx2) and washed with water (50 mLx3) and brine (50 mL). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by column flash chromatography (EA/PE=0%~100%) to give the title product (1 g, 95 % yield) as a white solid. ESI-MS (M+H) +: 216.0 Step 4: Preparation of 5-bromo-6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazole. [01200] To a mixture of 5-bromo-6-fluoro-2H-benzo[d][1,2,3]triazole (500 mg, 2.32 mmol) in toluene (10 mL) was added 1,1-dimethoxy-N,N-dimethylmethanamine (1 mL) under N2 at rt. Then the mixture was stirred at 120 ℃ for 1 h under N2. The mixture was filtered over celite and washed with EtOAc (20 mL). The reaction mixture was added water (10 mL), extracted with EtOAc (10 mL x 3). The organic layers were dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel chromatography (eluted with EtOAc in petroleum ether from 0% to 10%) to afford the title product (218 mg, 41 % yield) as a white solid. ESI-MS (M+H) +: 230.0.1H NMR (400 MHz, DMSO-d6) δ 8.47 (d, J = 6.4 Hz, 1H), 8.00 (d, J = 8.4 Hz, 1H), 4.50 (s, 3H). Step 5: Preparation of N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01201] To a mixture of 5-bromo-6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazole (218 mg, 0.95 mmol) and diphenylmethanimine (206 mg, 1.14 mmol) in 1,4-dioxane (20 mL) were added Cs2CO3 (926.3 mg, 2.84 mmol), Xantphos (110 mg, 0.19 mmol) and Pd2(dba)3 (87 mg, 0.01 mmol) under N2 at rt. Then the mixture was stirred at 110 ℃ for 5 h under N2. The mixture was filtered over celite and washed with EtOAc. The reaction mixture was added water (20 mL), extracted with EtOAc (20 mL x 3). The organic layers were dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel chromatography (eluted with EtOAc in petroleum ether from 0% to 50%) to afford the title product (281 mg, 89.7 % yield) as a yellow oil. ESI-MS (M+H) +: 331.0 Step 6: Preparation of 6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine. [01202] To a mixture of N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (281 mg, 0.85 mmol) in MeOH (10 mL) was added H2N-OH HCl (294 mg, 4.26 mmol) and CH3COONa (209.5 mg, 2.55 mmol) under N2 at rt. Then the mixture was stirred at 25 ℃ for 1 h under N2. The mixture was filtered over celite and washed with EtOAc (20 mL). The reaction mixture was added water (10 mL), extracted with EtOAc (10 mL *3). The organic layers were dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel chromatography (eluted with EtOAc in petroleum ether from 0% to 20%) to afford the title product (120 mg, 85.1 % yield) as a white solid. ESI-MS (M+H) +: 167.0.1H NMR (400 MHz, DMSO-d6) δ 7.53 (d, J = 11.2 Hz, 1H), 6.89 (d, J = 8.4 Hz, 1H), 5.48 (s, 2H), 4.32 (s, 3H). Step 7: Preparation of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01203] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (10 mL) were added triphosgene (121.2 mg, 0.41 mmol) and TEA (100 mg, 0.99 mmol) under N2 at 0 ℃ for 1 h, then added 6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine (78.3 mg, 0.47 mmol) under N2 at 0 ℃. Then the mixture was stirred at 70 ℃ for 16 h under N2. The mixture was filtered over celite and washed with EtOAc. (20 mL) The reaction mixture was added water (10 mL), extracted with EtOAc (10 mL *3). The organic layers were dried over Na2SO4, filtered and concentrated. The residue was purified by silica gel chromatography (eluted with MeOH in DCM from (0% to 10%) to afford the title product (120 mg, 75 % yield) as a yellow solid. ESI-MS (M+H) +: 511.2 Step 8: Preparation of (R)-N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide TFA salt. [01204] A mixture of tert-butyl (R)-4-(1-((6-fluoro-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.24 mmol) in TFA (2 mL) and DCM (10 mL) was stirred at 25 ℃ for 2 h under N2. The mixture was concentrated and purified by prep-HPLC (0.1%TFA in H2O / ACN) to afford the title product (21.42 mg, 22.3 % yield) as a white solid. ESI-MS (M+H) +: 411.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 8.64 (d, J = 7.2 Hz, 1H), 7.98 (d, J = 6.0 Hz, 1H), 7.86 (d, J = 11.2 Hz, 1H), 6.65 (d, J = 6.2 Hz, 1H), 4.44 (s, 3H), 4.06 (t, J = 8.0 Hz, 2H), 3.81 (d, J = 12.4 Hz, 2H), 3.44 – 3.33 (m, 2H), 3.25 – 3.10 (m, 4H), 3.05 – 2.95 (m, 1H), 1.28 (d, J = 6.4 Hz, 3H). Example 422 – Preparation of (R)-N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000616_0001
Step 1: Preparation of 4-bromo-5-methyl-2-nitroaniline. [01205] To a solution of 5-methyl-2-nitroaniline (10 g, 65.72 mmol) in CH3CN (30 mL) was added NBS (11.7 g, 65.72 mmol) in portions under 0 ℃ under stirring. The mixture was stirred at room temperature for 1 h. The mixture was filtered to give the title product (15.3 g, yield: 100%) as an orange solid. ESI-MS (M+H) +: 233.1.1H NMR (400 MHz, DMSO-d6) δ 8.09 (s, 1H), 7.48 (s, 2H), 6.98 (s, 1H), 2.27 (s, 3H). Step 2: Preparation of 4-bromo-5-methylbenzene-1,2-diamine. [01206] To a solution of 4-bromo-5-methyl-2-nitroaniline (15.3 g, 66.23 mmol) in EtOH (100 mL) and H2O (20 mL) were added NH4Cl (26.6 g, 496.75 mmol) and Fe (37.1 g, 662.34 mmol). The mixture was stirred at 80 ℃ for 1 h. The mixture was filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM/MeOH=90%:10%) to give title product (8.1 g, yield: 87%) as a yellow solid. ESI-MS (M+H) +: 202.8.1H NMR (400 MHz, DMSO-d6) δ 6.66 (s, 1H), 6.43 (s, 1H), 4.51 (s, 4H), 2.08 (s, 3H). Step 3: Preparation of 5-bromo-6-methyl-2H-benzo[d][1,2,3]triazole. [01207] To a solution of 4-bromo-5-methylbenzene-1,2-diamine (7 g, 34.81 mmol) in H2O (20 mL) and AcOH (12 mL) was added NaNO2 (12.2 g, 174.04 mmol). The mixture was stirred at room temperature for 1 h. The pH of mixture was adjusted to ~8 by ammonium hydroxide. The mixture was then diluted with H2O (100 mL) and extracted with EA (150 mL*3). The organic layer was collected and washed by brine (200 mL), dried over Na2SO4, filtered and concentrated to give crude product (2.9 g, yield:39%) as brown solid. ESI-MS (M+H) +: 212.1. Step 4: Preparation of 5-bromo-2,6-dimethyl-2H-benzo[d][1,2,3]triazole. [01208] To a solution of 5-bromo-6-methyl-2H-benzo[d][1,2,3]triazole (2.5 g, 11.79 mmol) in toluene (20 mL) was added DMF-DMA (2 mL). The mixture was stirred at 120 ℃ for 1 h. The mixture was diluted with H2O (20 mL), and extracted with EA (30 mL*3). The organic layer was collected and washed by brine (50 mL), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=80%:20%) to give the title product (553 mg, yield: 21%) as a yellow solid. ESI-MS (M+H) +: 228.0.1H NMR (400 MHz, DMSO-d6) δ 8.26 (s, 1H), 7.93 (s, 1H), 4.47 (s, 3H), 2.49 (s, 3H). Step 5: Preparation of N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01209] To a solution of 5-bromo-2,6-dimethyl-2H-benzo[d][1,2,3]triazole (450 mg, 1.99 mmol) in 1,4-dioxane (30 mL) were added diphenylmethanimine (433 mg, 2.39 mmol), Cs2CO3 (1945 mg, 5.97 mmol), XantPhos (231 mg, 0.40 mmol) and Pd2(dba)3 (183 mg, 0.20 mmol). The mixture was stirred at 110 ℃ for 5 h. The mixture was diluted with H2O (30 mL), extracted with EA (50 mL*3). The organic layer was collected and washed by brine (100 mL), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=80%:20%) and triturated with DCM:MeOH=10%:90% to give title product (326 mg, yield: 50%) as a yellow solid. ESI-MS (M+H) +: 327.1.1H NMR (400 MHz, DMSO-d6) δ 7.75 – 7.71 (m, 2H), 7.62 (s, 1H), 7.58 – 7.46 (m, 3H), 7.28 (t, J = 7.5 Hz, 3H), 7.20 (dd, J = 7.6, 1.6 Hz, 2H), 6.78 (s, 1H), 4.33 (s, 3H), 2.30 (s, 3H). Step 6: Preparation of 2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-amine. [01210] To a solution of N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (200 mg, 0.61 mmol) in MeOH (10 mL) was added hydroxylamine hydrochloride (212 mg, 3.07 mmol), CH3COONa (151 mg, 1.84 mmol). The mixture was stirred at room temperature for 1 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=0%:100%) to give title product (126 mg, yield: 50%) as yellow solid. ESI-MS (M+H) +: 163.2.1H NMR (400 MHz, DMSO-d6) δ 7.45 (s, 1H), 6.77 (s, 1H), 5.12 (s, 2H), 4.29 (s, 3H), 2.21 (d, J = 0.5 Hz, 3H). Step 7: Preparation of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01211] To a solution of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (30 mL) was added TEA (318 mg, 3.14 mmol), triphosgene (113 mg, 0.38 mmol), and 2,6-dimethyl-2H- benzo[d][1,2,3]triazol-5-amine (62 mg, 0.38 mmol) under 0 ℃ under stirring. The mixture was stirred at 70 ℃ overnight. The mixture diluted with H2O (30 mL) and the precipitate was filtered to give title product (30 mg, yield: 19%) as yellow solid. ESI-MS (M+H) +: 507.5.1H NMR (400 MHz, DMSO-d6) δ 11.93 (s, 1H), 8.58 (s, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.75 (s, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.42 (s, 3H), 4.18 – 4.17 (m, 1H), 4.03 (t, J = 8.5 Hz, 2H), 3.78 (d, J = 13.3 Hz, 1H), 3.62 (dd, J = 26.1, 12.1 Hz, 2H), 3.16 – 3.14 (m, 2H), 3.07 (dd, J = 12.8, 3.7 Hz, 1H), 2.94 (dd, J = 11.9, 8.6 Hz, 1H), 2.52 (s, 3H), 1.43 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 8: Preparation of (R)-N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01212] To a solution of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-benzo[d][1,2,3]triazol- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (30 mg, 0.06 mmol) in MeOH (4 mL) was added HCl (4M in dioxane, 2 mL). The mixture was stirred at room temperature overnight. The mixture was concentrated and purified by Prep-HPLC (0.05% NH3.H2O in water / CH3CN) to give title product (2.25 mg, yield: 9%) as a yellow solid. ESI-MS (M+H) +: 407.4.1H NMR (400 MHz, DMSO-d6) δ 11.97 (s, 1H), 8.58 (s, 1H), 7.89 (d, J = 6.1 Hz, 1H), 7.75 (s, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.41 (s, 3H), 4.01 (t, J = 8.6 Hz, 2H), 3.59 (d, J = 12.0 Hz, 2H), 3.14 (t, J = 8.5 Hz, 2H), 2.92 (d, J = 10.9 Hz, 1H), 2.78 (dd, J = 18.5, 11.5 Hz, 3H), 2.52 (s, 3H), 2.46 – 2.45 (m, 1H), 1.01 (d, J = 6.3 Hz, 3H). Example 423 – Preparation of N-(2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000619_0001
Compound 423 Step 1: Preparation of tert-butyl 7-(1-((2-methyl-2H-indazol-5-yl)carbamoyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [01213] A mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol), 2-methyl-2H-indazol-5-amine (53 mg, 0.36 mmol), triphosgene (107 mg, 0.36 mmol) and TEA (365 mg, 3.62 mmol) in THF (10 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at r.t for 1 h. The precipitate was filtered to afford title product (100 mg, 65.7%). ESI-MS (M+H) +: 504.4.1H NMR (400 MHz, CDCl3) δ 11.69 (s, 1H), 8.15 (s, 1H), 7.90 (d, J = 6.0 Hz, 1H), 7.80 (s, 1H), 7.62 (d, J = 9.1 Hz, 1H), 7.26 – 7.22 (m, 1H), 6.30 (d, J = 6.0 Hz, 1H), 4.15 (d, J = 8.9 Hz, 2H), 3.71 – 3.67 (m, 2H), 3.27 – 3.23 (m, 2H), 3.07 – 3.02 (m, 4H), 1.49 (s, 9H), 1.10 – 1.06 (m, 2H), 0.86 – 0.82 (m, 2H). Step 2: Preparation of N-(2-methyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01214] A mixture of tert-butyl 7-(1-((2-methyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (90 mg, 0.18 mmol) in 4M HCl /EA (10mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (29.66 mg, yield: 37.53 %) as a yellow solid. ESI-MS (M+H) +: 404.2.1H NMR (400 MHz, MeOD-d4) δ 8.52 (s, 1H), 8.11 – 8.09 (m, 1H), 7.80 (d, J = 7.4 Hz, 1H), 7.72 – 7.66 (m, 2H), 6.91 (d, J = 7.4 Hz, 1H), 4.44 – 4.37 (m, 2H), 4.31 (s, 3H), 4.07 – 4.02 (m, 2H), 3.85 (s, 2H), 3.57 – 3.48 (m, 4H), 1.23 – 1.18 (m, 2H), 1.17 – 1.12 (m, 2H). [01215] [01216] Example 424 – Preparation of (R)-4-(3-(hydroxymethyl)piperazin-1-yl)-N-(6-methoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000620_0001
Step 1: Preparation of tert-butyl (R)-2-(hydroxymethyl)-4-(1-((6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate. [01217] To a solution of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (640 mg, 3.59 mmol) in THF (50 mL) were added TEA (3.6 g, 36.00 mmol) and triphosgene (443 mg, 1.49 mmol) and stirred at 0oC for 5 min. Then tert-butyl (R)-4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-(hydroxymethyl)piperazine-1-carboxylate (1 g, 2.99 mmol) was added slowly at 0 oC. The mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (50 mL) and extracted with EA (50 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title compound (1 g, 62 %) as a white solid. ESI-MS (M+H) +:538.9.1H NMR (400 MHz, DMSO-d6) δ 12.16 (s, 1H), 8.67 (s, 1H), 8.15 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.95 (s, 1H), 4.05 (d, J = 6.2 Hz, 6H), 4.03 – 3.96 (m, 3H), 3.91 – 3.78 (m, 2H), 3.65 – 3.56 (m, 2H), 3.22 – 3.06 (m, 4H), 3.02 – 2.90 (m, 2H), 1.43 (s, 9H). Step 2: Preparation of (R)-4-(3-(hydroxymethyl)piperazin-1-yl)-N-(6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01218] To a mixture of tert-butyl (R)-2-(hydroxymethyl)-4-(1-((6-methoxy-2-methyl- 2H-pyrazolo[3,4-b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (900 mg, 1.67 mmol) in DCM (50 mL) were added HMDS (4 g, 25.05 mmol), TMSOTf (7.4 g, 33.40 mmol) at 0 oC . The mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (50 mL) and extracted with DCM (50 mLx2). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title compound (470.91 mg, 64 %) as a white solid. ESI-MS (M+H) +:439.2.1H NMR (400 MHz, DMSO-d6) δ 12.15 (s, 1H), 8.67 (s, 1H), 8.15 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 5.01 (s, 1H), 4.06 (d, J = 6.4 Hz, 6H), 4.03 – 3.97 (m, 2H), 3.76 – 3.63 (m, 2H), 3.50 – 3.45 (m, 2H), 3.17 – 3.08 (m, 3H), 3.01 – 2.87 (m, 3H), 2.80 – 2.71 (m, 1H). Example 425 – Preparation of (R)-4-(3-(hydroxymethyl)piperazin-1-yl)-N-(2-methyl- 2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000621_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate. [01219] A mixture of tert-butyl (R)-2-(hydroxymethyl)piperazine-1-carboxylate (2.66 g, 17.26 mmol), 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (4.1 g, 18.98 mmol) in DIEA (3 mL) was stirred at 140 oC for 16 h. The mixture was diluted with water (100 mL), extracted with EA (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was diluted with EA, stirred at r.t for 1 h. The precipitate was filtered to afford title product (3.2 g, 55.67%) as a yellow solid. ESI-MS (M+H) +: 335.2.1H NMR (400 MHz, CDCl3) δ 7.67 (d, J = 5.9 Hz, 1H), 6.09 (d, J = 6.0 Hz, 1H), 4.39 (s, 1H), 4.22 (s, 1H), 4.01 – 3.92 (m, 1H), 3.89 – 3.85 (m, 1H), 3.69 (d, J = 12.6 Hz, 1H), 3.55 (t, J = 8.3 Hz, 2H), 3.43 (d, J = 11.5 Hz, 1H), 3.26 – 3.16 (m, 1H), 3.10 – 3.02 (m, 2H), 2.92 – 2.90 (m, 2H), 1.49 (s, 9H). Step 2: Preparation of tert-butyl (R)-2-(hydroxymethyl)-4-(1-((2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01220] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate (200 mg, 0.59 mmol), 2-methyl-2H-indazol-5- amine (108.7 mg, 0.72 mmol), triphosgene (213.8 mg, 0.72 mmol) and TEA (725.2 mg, 7.18 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (20 mL), stirred at r.t for 1 h. The precipitate was filtered to afford title product (200 mg, 65.7%) as a yellow solid. ESI-MS (M+H) +: 508.4. Step 3: Preparation of (R)-4-(3-(hydroxymethyl)piperazin-1-yl)-N-(2-methyl-2H-indazol-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01221] A mixture of tert-butyl (R)-2-(hydroxymethyl)-4-(1-((2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (190 mg, 0.37 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (77.76 mg, yield: 51.63 %) as a white solid. ESI-MS (M+H) +: 408.2.1H NMR (400 MHz, DMSO-d6) δ 11.77 (s, 1H), 8.21 (d, J = 7.8 Hz, 2H), 7.99 (d, J = 1.4 Hz, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.55 (d, J = 9.1 Hz, 1H), 7.22 (dd, J = 9.2, 2.0 Hz, 1H), 6.51 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 3.98 (t, J = 8.6 Hz, 2H), 3.70 (d, J = 12.2 Hz, 1H), 3.61 (d, J = 11.4 Hz, 1H), 3.45 – 3.39 (m, 2H), 3.11 (t, J = 8.6 Hz, 2H), 3.05 – 2.98 (m, 1H), 2.94 – 2.77 (m, 3H), 2.71 – 2.62 (m, 1H). Example 426 – Preparation of (R)-N-(7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate.
Figure imgf000623_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01222] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 7-methoxy-2-methylimidazo[1,2- a]pyrimidin-6-amine (110 mg, 0.62 mmol) and TEA (471 mg, 4.70 mmol) in THF (8 mL) was added triphosgene (140 mg, 0.47 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:6) to give title product (80 mg, Y: 48.8%) as a yellow solid. ESI-MS (M+H) +: 523.3. Step 2: Preparation of (R)-N-(7-methoxy-2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01223] A mixture of tert-butyl (R)-4-(1-((7-methoxy-2-methylimidazo[1,2- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (60 mg, 0.11 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (24 mg, Y: 49.5 %) as a white solid. ESI-MS (M+H) +: 423.2.1H NMR (400 MHz, DMSO-d6) δ 12.04 (s, 1H), 9.28 (s, 1H), 8.29 (s, 2H), 7.92 (d, J = 5.9 Hz, 1H), 7.44 (s, 1H), 6.53 (d, J = 6.0 Hz, 1H), 4.06 (s, 3H), 4.02 – 3.92 (m, 3H), 3.19 – 3.06 (m, 4H), 3.05 – 2.96 (m, 2H), 2.94 – 2.85 (m, 1H), 2.77 – 2.69 (m, 1H), 2.24 (s, 3H), 1.15 (d, J = 5.9 Hz, 3H). Example 427 – Preparation of (S)-N-(6-fluoro-2H-indazol-5-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000624_0001
Step 1: Preparation of 5-bromo-6-fluoro-2-(tetrahydro-2H-pyran-2-yl)-2H-indazole. [01224] To a solution of 5-bromo-6-fluoro-2H-indazole (2 g, 9.34 mmol) in DCM (20 mL) were added PPTS (0.7 g, 2.80 mmol) and DHP (2.35 g, 28.05 mmol) at 0 oC. The mixture was stirred at r.t for 4 h. The mixture was diluted with water (50 mL) and extracted with DCM (50 mL×3). The organic phase was washed with brine (50 mL), dried over Na2SO4 and filtered. The filtrate was concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA = 1: 1) to give the title compound (2.2 g, yield: 78 %) as a yellow solid. ESI-MS (M+H) +:298.9. Step 2: Preparation of 1-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)propan-2-one. [01225] To a solution of 5-bromo-6-fluoro-2-(tetrahydro-2H-pyran-2-yl)-2H-indazole (2.1 g, 7.04 mmol) in 1,4-Dioxane (21 mL) were added diphenylmethanimine (1.53 g, 8.45 mmol) ,BINAP (430 mg, 0.7 mmol), Pd(OAc)2(159 mg, 0.7 mmol) and Cs2CO3 (6.89 g, 6.3 mmol). The mixture was stirred at 100 ℃ for 5 h. The mixture was diluted with water (30 mL), extracted with EA (30 mL×3). The organic phase was washed with brine (50 mL), dried over Na2SO4 and filtered. The filtrate was concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA = 3: 1) to give the title compound (700 mg, yield: 25 %) as a yellow solid. ESI-MS (M+H)+:400.2. Step 3: Preparation of 6-fluoro-2-(tetrahydro-2H-pyran-2-yl)-2H-indazol-5-amine. [01226] To a solution of N-(6-fluoro-2-(tetrahydro-2H-pyran-2-yl)-2H-indazol-5-yl)- 1,1-diphenylmethanimine (700 mg, 1.75 mmol) in MeOH (10 mL) were added NH2OH.HCl (182 mg, 5.26 mmol) and NaOAc (431 mg, 0.53 mmol). The mixture was stirred at rt for 2 h. The mixture was quenched with water (30 mL), extracted with EA (30 mL×3). The organic layers was washed with brine (50 mL), dried over Na2SO4 and filtered. The filtrate was concentrated in vacuo. The crude was purified by silica gel column chromatography (PE: EA = 1: 1) to give the title compound (400 mg, yield: 97 %) as a yellow solid. ESI-MS (M+H)+:236.1. Step 4: Preparation of tert-butyl (2S)-4-(1-((6-fluoro-2-(tetrahydro-2H-pyran-2-yl)-2H- indazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01227] To a solution of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (50 mg, 0.16 mmol) and 6-fluoro-2-(tetrahydro-2H-pyran- 2-yl)-2H-indazol-5-amine (44 mg, 0.19 mmol) in THF (1 mL) was added TEA (79 mg, 0.78 mmol). Triphosgene (56 mg, 0.19 mmol) in THF (1 mL) was added the mixture at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL×3). The organic layers was washed with brine (10 mL), dried over Na2SO4 and filtered. The filtrate was concentrated in vacuo. The crude was purified by Prep-HPLC (0.1 % NH4HCO3 in water / CH3CN) to give title product (40 mg, yield: 43 %) as a yellow solid. ESI-MS (M+H) +: 580.4. Step 5: Preparation of (S)-N-(6-fluoro-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01228] To a mixture of tert-butyl (2S)-4-(1-((6-fluoro-2-(tetrahydro-2H-pyran-2-yl)- 2H-indazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine- 1-carboxylate (40 mg, 0.71 mmol) in DCM (2 mL) was added TFA(0.5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo. The crude was purified by prep-HPLC (0.1 % TFA in water / CH3CN) to give title product (2.65 mg, yield: 7 %) as a white solid. ESI-MS (M+H) +: 396.2.1H NMR (400 MHz, CD3OD-d4) δ 8.48 (d, J = 7.4 Hz, 1H), 8.02 - 7.96 (m, 2H), 7.34 (d, J = 10.8 Hz, 1H), 6.58 (d, J = 6.2 Hz, 1H), 4.13 (t, J = 8.6 Hz, 2H), 3.78 (d, J = 13.2 Hz, 2H), 3.41 (d, J = 12.4 Hz, 2H), 3.26 -3.09 (m, 4H), 2.91 (m, 1H), 1.35 (d, J = 6.4 Hz, 3H). Example 428 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000626_0001
Step 1: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01229] To a mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2-methyl-2H-indazol-5- amine (66.41 mg, 0.45 mmol) in THF (10 mL) were added TEA (136.35 mg, 1.35 mmol) and triphosgene (266.40 mg, 0.9 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (120 mg, 52.81%) as a white solid. ESI-MS (M+H) +: 506.0. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methyl-2H-indazol-5-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01230] A mixture of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (120 mg, 0.24 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The precipitate was filtered and lyophilized to give title product (98 mg, 92.59%) as a white solid. ESI-MS (M+H) +:406.2.1H NMR (400 MHz, MeOD-d4) δ 8.32 (s, 1H), 7.98 (s, 1H), 7.81 (d, J = 7.3 Hz, 1H), 7.63 (d, J = 9.2 Hz, 1H), 7.54 – 7.53 (m, 1H), 6.96 (d, J = 7.4 Hz, 1H), 4.39 (t, J = 8.6 Hz, 2H), 4.32 – 4.29 (m, 1H), 4.29 – 4.24 (m, 4H), 3.59 – 3.51 (m, 4H), 3.27 – 3.21 (m, 2H), 1.43 (d, J = 6.6 Hz, 6H). Example 429 – Preparation of (R)-N-(2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate.
Figure imgf000627_0001
step 3 step 4
Figure imgf000627_0002
step 6 step
Figure imgf000627_0003
Compound 429 2 FA Step 1: Preparation of N-(2,4-dimethoxybenzyl)-4-iodo-5-methylpyridin-2-amine. [01231] To a mixture of 2-fluoro-4-iodo-5-methylpyridine (50 g, 210.97 mmol) in DIEA (500 mL) was added (2,4-dimethoxyphenyl)methanamine (35.23 g, 210.97 mmol). The mixture was stirred at 120 oC for 16 h. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3). The combined organic layer was washed with brine (400 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA = 100:0 to 2:1) to give the title compound (60 g, Y: 74.40 %) as a white solid. ESI-MS (M+H) +: 385.3. Step 2: Preparation of 4-iodo-5-methylpyridin-2-amine. [01232] A mixture of N-(2,4-dimethoxybenzyl)-4-iodo-5-methylpyridin-2-amine (10 g, 26.04 mmol) in TFA (100 mL) was stirred at r.t for 16 h. The mixture was concentrated in vacuo, the residue was diluted with water (100 mL), adjust pH to 9 by sat. Na2CO3, extracted with DCM (300 mL *3), the organic layer was concentrated vacuo to give title product (2.5 g, 91.52%) as a yellow solid. ESI-MS (M+H) +: 235.3. Step 3: Preparation of 1,2-diamino-4-iodo-5-methylpyridin-1-ium 2,4,6- trimethylbenzenesulfonate. [01233] To a solution of 4-iodo-5-methylpyridin-2-amine (10 g, 42.74 mmol) in CHCl3 (100 mL) was added O-(mesitylsulfonyl)hydroxylamine (18.38 g, 85.48 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The precipitate was filtered and dried in vacuo to give crude title product (8.5 g, 44.29%) as a white solid. ESI-MS (M+H) +: 250.0. Step 4: Preparation of 7-iodo-2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridine. [01234] To a mixture of 1,2-diamino-4-iodo-5-methylpyridin-1-ium2,4,6- trimethylbenzenesulfonate (8.5 g, 18.93 mmol) in Ac2O (100 mL) was added 4- methylbenzenesulfonic acid (4.88 g, 28.40 mmol). The mixture was stirred at 100 oC for 16 h. The mixture was concentrated in vacuo and diluted with H2O (20 mL) and the precipitate was filtered and dried in vacuo to give crude title product (4.8 g, Y: 92.87%) as a white solid. ESI-MS (M+H)+: 274.0. Step 5: Preparation of N-(2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-1,1- diphenylmethanimine. [01235] To a mixture of 7-iodo-2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridine (4.8 g, 17.58 mmol), diphenylmethanimine (4.77 g, 26.37 mmol) and BINAP (2.19 g, 3.52 mmol) in 1,4-dioxane (50 mL) were added Cs2CO3 (11.46 g, 35.16 mmol) and Pd(OAc)2 (397.31 mg, 1.76 mmol). The mixture was stirred at 110 oC for 16 h under N2. The mixture was diluted with H2O (50 mL) and extracted with EA (50 mL x 3). The organic phase was washed with brine (50 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (4.5 g, 78.50%) as a brown solid. ESI-MS (M+H) +:327.2.1H NMR (400 MHz, DMSO-d6) δ 8.57 (s, 1H), 7.75 – 7.50 (m, 5H), 7.38 – 7.24 (m, 5H), 6.69 (s, 1H), 2.32 (s, 3H), 2.17 (s, 3H). Step 6: Preparation of 2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-7-amine hydrochloride. [01236] A mixture of N-(2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-1,1- diphenylmethanimine (4.5 g, 13.80 mmol) in 4M HCl/EA (50 mL) was stirred at r.t for 2 h. The mixture was filtrated and the filtrate was concentrated vacuo to give title product (2.5 g, 91.52%) as a yellow solid. ESI-MS (M+H+): 163.5. Step 7: Preparation of tert-butyl (R)-4-(1-((2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01237] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 2,6-dimethyl-[1,2,4]triazolo[1,5- a]pyridin-7-amine hydrochloride (93.40 mg, 0.47 mmol) in THF (5 mL) were added TEA (142.41 mg, 1.41 mmol) and triphosgene (278.24 mg, 0.94 mmol) at 0 oC. The mixture was stirred at rt for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 25.23%) as a white solid. ESI-MS (M+H) +: 507.4. Step 8: Preparation of (R)-N-(2,6-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01238] To a mixture of tert-butyl (R)-4-(1-((2,6-dimethyl-[1,2,4]triazolo[1,5- a]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (60 mg, 0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (6.31 mg, 10.56%) as a white solid. ESI-MS (M+H) +:407.1.1H NMR (400 MHz, DMSO-d6) δ 12.26 (s, 1H), 8.65 (s, 1H), 8.37 (s, 1H), 8.25 (s, 2H), 7.90 (d, J = 6.0 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.03 – 3.98 (m, 2H), 3.17 – 3.12 (m, 2H), 3.04 – 2.76 (m, 5H), 2.63 – 2.53 (m, 2H), 2.39 (d, J = 4.8 Hz, 6H), 1.06 (d, J = 6.1 Hz, 3H).
Example 430 – Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000630_0001
step 1
Figure imgf000630_0003
step 4
Figure imgf000630_0002
: Preparation of ethyl 2,5-dimethyl-4,7-dihydro-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylate. [01239] To a mixture of 5-methyl-1H-1,2,4-triazol-3-amine (8.5 g, 86.73 mmol) in EtOH (120 mL) were added ethyl 3-oxobutanoate (11.3 g, 86.73 mmol) and (CH2O)n (2.6 g, 86.73 mmol). The mixture was stirred at 80oC for 16 h. The mixture was concentrated in vacuo. The residue was diluted with H2O (100 mL) and extracted with EA (100 mL*3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to get title product (18.0 g, yield: 93.5%) as a white solid. ESI-MS (M+H)+: 223.2.1H NMR (400 MHz, DMSO- d6) δ 10.32 (s, 1H), 4.73 (s, 2H), 4.15 – 4.07 (m, 2H), 2.30 (s, 3H), 2.15 (s, 3H), 1.25 – 1.18 (m, 3H). Step 2: Preparation of ethyl 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylate. [01240] To a solution of ethyl 2,5-dimethyl-4,7-dihydro-[1,2,4]triazolo[1,5- a]pyrimidine-6-carboxylate (18.0 g, 81.08 mmol) in THF (200 mL) was added MnO2 (35.2 g, 405.40 mmol). The mixture was stirred at 70oC for 16 h. The mixture was filtered and the filtrate was concentrated in vacuo to give title product (9.4 g, Y: 52.7%) as a white solid. ESI-MS (M+H)+: 221.2. Step 3: Preparation of 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylic acid. [01241] To a mixture of ethyl 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6- carboxylate (9.4 g, 42.73 mmol) in THF: EtOH: H2O (5:1:1, 140 mL) was added LiOH (5.1 g, 213.64 mmol). The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo. The crude was diluted with water (50 mL), adjust pH to 5 with 1M HCl and the precipitate was filtered, dried to give the title compound (4.1 g, Y: 50.0 %) as a yellow solid. ESI-MS (M+H) +:193.1. Step 4: Preparation of tert-butyl (R)-4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01242] To a mixture of 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylic acid (136 mg, 0.71 mmol) in toluene (5 mL) were added TEA (191 mg, 1.89 mmol), DPPA (363 mg, 1.32 mmol). The mixture was stirred at r.t for 1 h and warmed up to 90oC and stirred for 1 h. Tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added to the mixture and stirred at 100 oC for 4 h. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to give the title compound (60 mg, Y: 25.0 %) as a white solid. ESI-MS (M+H) +:508.2. Step 5: Preparation of (R)-N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01243] To a solution of tert-butyl (R)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (50 mg, 0.10 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and lyophilized to give title compound (43 mg, 81.9 %) as a red solid. ESI-MS (M+H)+:408.2.1H NMR (400 MHz, MeOD-d4) δ 9.53 (s, 1H), 7.85 – 7.83 (m, 1H), 6.96 – 6.94 (m, 1H), 4.49 – 4.40 (m, 2H), 4.31 – 4.18 (m, 2H), 3.63 – 3.53 (m, 5H), 3.42 – 3.35 (m, 2H), 2.84 (s, 3H), 2.71 (s, 3H), 1.44 (d, J = 6.5 Hz, 3H). Example 431 – Preparation of (S)-N-(7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000632_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01244] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.38 mol), 7-fluoro-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine (91 mg, 0.45 mmol), triphosgene (35 mg, 0.45 mmol), and TEA (457 mg, 4.53 mmol) in THF (12 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered and triturated with MeOH (5 mL) to afford title product (140 mg, 72.24 %) as a yellow solid. ESI-MS (M+H) +: 511.4.1H NMR (400 MHz, CDCl3) δ 12.29 (d, J = 2.3 Hz, 1H), 9.62 (d, J = 6.7 Hz, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.30 (d, J = 10.2 Hz, 1H), 6.37 (d, J = 6.1 Hz, 1H), 4.39 – 4.30 (m, 1H), 4.21 – 4.15 (m, 2H), 3.97 (d, J = 13.2 Hz, 1H), 3.54 (d, J = 11.9 Hz, 1H), 3.44 (d, J = 12.5 Hz, 1H), 3.28 – 3.20 (m, 1H), 3.16 – 3.12 (m, 2H), 3.12 – 3.07 (m, 1H), 3.00 – 2.93 (m, 1H), 2.56 (s, 3H), 1.49 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01245] A mixture of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (130 mg, 0.25 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (70.86 mg, yield: 63.55 %) as a white solid. ESI-MS (M+H) +: 411.2.1H NMR (400 MHz, D2O) δ 9.08 (d, J = 6.4 Hz, 1H), 7.71 (dd, J = 8.0, 5.1 Hz, 2H), 6.78 (d, J = 7.4 Hz, 1H), 4.31 (t, J = 8.5 Hz, 2H), 4.17 – 4.10 (m, 2H), 3.58 – 3.48 (m, 3H), 3.43 (t, J = 8.5 Hz, 2H), 3.38 – 3.27 (m, 2H), 2.56 (d, J = 1.5 Hz, 3H), 1.34 (d, J = 6.6 Hz, 4H). Example 432 – Preparation of (R)-N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000633_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01246] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) in THF (20 mL) were added 2,7- dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (101 mg, 0.62 mmol), TEA (313 mg, 3.10 mmol), triphosgene (110 mg, 0.37 mmol) (in THF (1 mL)) in 0℃. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM: MeOH=10:1) to give title product (70 mg, yield: 43 %) as a white solid. ESI-MS (M+H) +:507.0.1H NMR (400 MHz, CDCl3) δ 11.81 (s, 1H), 9.49 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 7.40 (s, 1H), 6.36 (d, J = 6.0 Hz, 1H), 4.37 – 4.31 (m, 1H), 4.22 – 4.16 (m, 2H), 3.99 – 3.92 (m, 1H), 3.56 – 3.49 (m, 1H), 3.47 – 3.43 (m, 1H), 3.27 – 3.21 (m, 1H), 3.16 – 3.09 (m, 3H), 3.00 – 2.94 (m, 1H), 2.56 (s, 3H), 2.53 (s, 3H), 1.49 (s, 9H), 1.31 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (R)-N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01247] To a mixture of tert-butyl (R)-4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.098 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (9.53 mg, 21%) as a white solid. ESI-MS (M+H) +:407.2.1H NMR (400 MHz, MeOD-d4) δ 9.37 (s, 1H), 8.51 (s, 1H), 7.85 (d, J = 6.0 Hz, 1H), 7.39 (s, 1H), 6.48 (d, J = 6.1 Hz, 1H), 4.06 – 3.98 (m, 2H), 3.78 – 3.70 (m, 2H), 3.43 – 3.36 (m, 2H), 3.24 – 3.13 (m, 2H), 3.11 – 3.05 (m, 2H), 2.95 – 2.87 (m, 1H), 2.49 (s, 3H), 2.45 (s, 3H), 1.36 (d, J = 6.5 Hz, 3H). Example 433 – Preparation of (R)-4-(3-(hydroxymethyl)piperazin-1-yl)-N-(6-methoxy-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000634_0001
Compound 433 Step 1: Preparation of tert-butyl (R)-2-(hydroxymethyl)-4-(1-((6-methoxy-2-methyl-2H- indazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01248] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (hydroxymethyl)piperazine-1-carboxylate (200 mg, 0.59 mmol), 2,7-dimethyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (150 mg, 0.72 mmol), triphosgene (210 mg,0.72 mmol) and TEA (720 mg, 7.18 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water (30 mL), stirred at r.t for 1 h. The precipitate was filtered and triturated with MeOH (5 mL) to afford title product (200 mg, 62.1%) as a yellow solid. ESI-MS (M+H) +: 538.3. Step 2: Preparation of (R)-4-(3-(hydroxymethyl)piperazin-1-yl)-N-(6-methoxy-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01249] A mixture of tert-butyl (R)-2-(hydroxymethyl)-4-(1-((6-methoxy-2-methyl- 2H-indazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (190 mg, 0.35 mmol) in 4M HCl / EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (19.54 mg, yield: 12.77 %) as a yellow solid. ESI-MS (M+H) +: 438.2.1H NMR (400 MHz, DMSO-d6) δ 12.09 (s, 1H), 8.40 (s, 1H), 8.27 (s, 1H), 8.12 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.00 (s, 1H), 6.49 (d, J = 6.1 Hz, 1H), 4.06 (s, 3H), 4.00 (d, J = 8.2 Hz, 2H), 3.96 (s, 3H), 3.67 (d, J = 11.8 Hz, 1H), 3.58 (d, J = 11.8 Hz, 1H), 3.39 (d, J = 4.6 Hz, 2H), 3.11 (t, J = 8.5 Hz, 2H), 2.99 (d, J = 9.6 Hz, 1H), 2.88 (t, J = 11.6 Hz, 1H), 2.82 – 2.74 (m, 2H), 2.64 – 2.57 (m, 1H). Example 434 – Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000635_0001
Step 1: Preparation of tert-butyl (2-(2-chloro-4-iodo-6-(trifluoromethyl)pyridin-3- yl)ethyl)carbamate. [01250] To a solution of 2-chloro-4-iodo-6-(trifluoromethyl)pyridine (25 g, 81.43 mmol) in THF (400 mL) was added LDA (76 mL, 122.15 mmol, 1.6 M in THF) at -78°C. The mixture was stirred at -78°C for 1.5 h. Then tert-butyl 1,2,3-oxathiazolidine-3- carboxylate 2,2-dioxide (27.2 g, 122.15 mmol) was added to the reaction mixture and stirred at r.t for 16 h. The reaction mixture was quenched with sat. NH4Cl (250 mL) and extracted with DCM (300 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo to give title compound (33 g, Y: 89.9%) a yellow solid. Step 2: Preparation of 2-(2-chloro-4-iodo-6-(trifluoromethyl)pyridin-3-yl)ethan-1-amine HCl salt. [01251] To a solution of tert-butyl (2-(2-chloro-4-iodo-6-(trifluoromethyl)pyridin-3- yl)ethyl)carbamate (30 g, 66.67 mmol) in 4M HCl/EA (200 mL) was stirred at RT for 2 h. The precipitate was filtered and concentrated in vacuo to give title compound (23 g, Y: 98.7%) as a yellow solid. ESI-MS (M+H) +: 392.0.1H NMR (400 MHz, DMSO-d6) δ 8.43 (s, 1H), 8.27 (s, 2H), 3.35 – 3.29 (m, 2H), 3.00 – 2.90 (m, 2H). Step 3: Preparation of 4-iodo-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine [01252] To a solution of 2-(2-chloro-4-iodo-6-(trifluoromethyl)pyridin-3-yl)ethan-1- amine HCl salt (21 g, 59.83 mmol) in ACN (300 mL) was added DIEA (24.77 g, 179.49 mmol). The mixture was stirred at 50oC for 48 h. The mixture was diluted with H2O (200 mL), extracted with DCM (200 mL*3), organic layer was concentrated in vacuo and purified by silica gel column (PE: EA = 3: 1) to give title compound (20 g, crude) as a brown solid. ESI-MS (M+H) +: 314.9. Step 4: Preparation of 1-(4-iodo-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1- yl)ethan-1-one. [01253] To a mixture of 4-iodo-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine (11 g, 34.92 mmol) in DCM (150 mL) was added acetyl chloride (5.45 g, 69.84 mmol) at 0oC, the mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (100 mL), extracted with DCM (100 mL*3), organic layer was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 3) to give title product (1.5 g, 10.0%) as a yellow solid. ESI-MS (M+H) +: 356.9. Step 5: Preparation of tert-butyl (S)-4-(1-acetyl-6-(trifluoromethyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [01254] A mixture of 1-(4-iodo-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-1-yl)ethan-1-one (1 g, 2.80 mmol), tert-butyl (S)-2-methylpiperazine-1-carboxylate (673 mg, 3.36 mmol), BINAP (349 mg, 0.56 mmol), Cs2CO3 (2.73 g, 8.4 mmol) and Pd2(dba)3 (256 mg, 0.28 mmol) in 1,4-dioxane (20 mL) was stirred at 100oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 5: 1) to give title product (500 mg, Y: 41.7%) as a yellow solid. ESI-MS (M +H) +: 429.2.1H NMR (400 MHz, DMSO-d6) δ 6.89 (s, 1H), 4.23 – 4.12 (m, 1H), 3.95 (t, J = 8.4 Hz, 2H), 3.80 – 3.55 (m, 3H), 3.22 – 3.08 (m, 4H), 3.03 – 2.95 (m, 1H), 2.51 (s, 3H), 1.42 (s, 9H), 1.17 (d, J = 6.6 Hz, 3H). Step 6: Preparation of tert-butyl (S)-2-methyl-4-(6-(trifluoromethyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01255] A mixture of tert-butyl (S)-4-(1-acetyl-6-(trifluoromethyl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (300 mg, 0.70 mmol) and KOH (196 mg, 350 mmol) in THF / MeOH / H2O (2 mL / 2 mL / 1mL) was stirred at 50oC for 16 h. The mixture was diluted with H2O (10 mL), extracted with DCM (10 mL*3), organic layer concentrated in vacuo to give title product (300 mg, crude) as a yellow solid. ESI-MS (M+H) +: 387.3. Step 7: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate. [01256] To a mixture of tert-butyl (S)-2-methyl-4-(6-(trifluoromethyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.26 mmol), 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine hydrochloride (64 mg, 0.69 mmol) and TEA (389 mg, 3.88 mmol) in THF (8 mL) was added triphosgene (115 mg, 0.39 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:7) to give title product (80 mg, Y: 53.6%) as a yellow solid. ESI-MS (M+H) +: 578.3. Step 8: Preparation of (S)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride. [01257] A mixture of tert-butyl (S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-6-(trifluoromethyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (70 mg, 0.12 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo to give title product (58 mg, Y: 93.5 %) as a yellow solid. ESI-MS (M+H) +: 478.0.1H NMR (400 MHz, DMSO-d6) δ 11.85 (d, J = 2.9 Hz, 1H), 9.68 – 9.66 (m, 2H), 9.54 (s, 1H), 8.16 (s, 1H), 8.07 (d, J = 9.9 Hz, 1H), 7.09 (s, 1H), 4.09 (t, J = 8.6 Hz, 2H), 4.02 – 3.92 (m, 2H), 3.31 – 3.28 (m, 3H), 3.24 – 3.16 (m, 2H), 3.15 – 3.03 (m, 2H), 2.45 (s, 3H), 1.32 (d, J = 6.4 Hz, 3H). Example 435 – Preparation of N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000638_0001
Compound 435 Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01258] To a solution of 2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-amine hydrochloride (179 mg, 0.90 mmol) and TEA (913 mg, 9.02 mmol) in THF (20 mL) was added triphosgene (267 mg, 0.90 mmol) at 0oC, after 10 min, tert-butyl (2R,6S)-4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (90 mg, 38.31 %) as a white solid. ESI-MS (M+H) +:521.3. Step 2: Preparation of N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01259] To a mixture of tert-butyl (2R,6S)-4-(1-((2,6-dimethyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in EA (2 mL) was added 4 M HCl/EA (3 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (20 mg, Y: 30.95 %) as a yellow solid. ESI-MS (M+H) +:421.2.1H NMR (400 MHz, D2O) δ 8.65 (s, 1H), 8.58 (s, 1H), 7.69 (d, J = 7.3 Hz, 1H), 6.78 (d, J = 7.4 Hz, 1H), 4.33 (t, J = 8.4 Hz, 2H), 4.23 (s, 3H), 4.22 – 4.16 (m, 2H), 3.56 – 3.41 (m, 4H), 3.26 – 3.16 (m, 2H), 1.32 (d, J = 6.6 Hz, 6H). Example 436 – Preparation of (S)-N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000639_0001
Compound 436 Step 1: Preparation of tert-butyl (S)-4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01260] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2,6-dimethyl-2H-pyrazolo[3,4- b]pyridin-5-amine (77 mg, 0.47 mmol) and TEA (471 mg, 4.70 mmol) in THF (8 mL) was added triphosgene (139.7 mg, 0.47 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:7) to give title product (120 mg, Y: 75.5%) as a yellow solid. ESI-MS (M+H) +: 507.4. Step 2: Preparation of (S)-N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01261] A mixture of tert-butyl (S)-4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (100 mg, 0.20 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1% FA in water / CH3CN) to give title product (45 mg, Y: 56.0 %) as a yellow solid. ESI-MS (M+H) +: 407.1.1H NMR (400 MHz, DMSO-d6) δ 11.81 (s, 1H), 8.61 (s, 1H), 8.24 (s, 1H), 8.21 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 4.00 (t, J = 8.5 Hz, 2H), 3.68 – 3.61 (m, 2H), 3.14 (t, J = 8.5 Hz, 2H), 3.10 – 3.05 (m, 1H), 3.05 – 2.75 (m, 4H), 2.65 (s, 3H), 1.11 (d, J = 6.3 Hz, 3H). Example 437 – Preparation of (R)-N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000640_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01262] To a solution of 2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-amine hydrochloride (187 mg, 0.94 mmol) and TEA (953 mg, 9.42 mmol) in THF (20 mL) was added triphosgene (279 mg, 0.94 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (140 mg, 58.66 %) as a white solid. ESI-MS (M+H) +:507.3. Step 2: Preparation of (R)-N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01263] To a mixture of tert-butyl (R)-4-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (130 mg, 0.25 mmol) in EA (2 mL) was added 4M HCl/EA (5 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with DCM: MeOH (8 mL, 5:1), then filtered and lyophilized to give title product (80 mg, 89.41 %) as a yellow solid. ESI-MS (M+H) +:407.2.1H NMR (400 MHz, D2O) δ 8.57 (s, 1H), 8.53 (s, 1H), 7.70 (d, J = 7.4 Hz, 1H), 6.77 (d, J = 7.4 Hz, 1H), 4.33 (t, J = 8.5 Hz, 2H), 4.23 (s, 3H), 4.14 (t, J = 12.2 Hz, 2H), 3.58 – 3.42 (m, 5H), 3.39 – 3.25 (m, 2H), 1.34 (d, J = 6.6 Hz, 3H). Example 438 – Preparation of N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000641_0001
Compound 438 Step 1: Preparation of tert-butyl 7-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01264] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol), 2,6-dimethyl-2H-pyrazolo[3,4- b]pyridin-5-amine (74 mg, 0.45 mmol) and TEA (451 mg, 4.50 mmol) in THF (8 mL) was added triphosgene (135 mg, 0.45 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:7) to give title product (80 mg, Y: 50.9%) as a yellow solid. ESI-MS (M+H) +: 519.3. Step 2: Preparation of N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01265] A mixture of tert-butyl 7-(1-((2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (60 mg, 0.12 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1% FA in water / CH3CN) to give title product (21 mg, Y: 43.8 %) as a yellow solid. ESI-MS (M+H) +: 419.2.1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 8.61 (s, 1H), 8.24 (s, 1H), 8.18 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.49 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 3.98 (t, J = 8.5 Hz, 2H), 3.30 – 3.22 (m, 2H), 3.14 – 3.11 (m, 2H), 3.08 (t, J = 8.5 Hz, 2H), 2.93 – 2.85 (m, 2H), 2.65 (s, 3H), 0.58 – 0.45 (m, 4H). Example 439 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000642_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01266] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 7-fluoro-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (75.00 mg, 0.45 mmol) in THF (10 mL) were added TEA (136.35 mg, 1.35 mmol) and triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 25.45%) as a white solid. ESI-MS (M+H) +: 525.4. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-fluoro-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01267] A mixture of tert-butyl (2R,6S)-4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (60 mg,0.11 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (10.34 mg, 22.17%) as a white solid. ESI- MS (M+H) +:425.2.1H NMR (400 MHz, DMSO-d6) δ 12.29 (s, 1H), 9.44 (d, J = 6.8 Hz, 1H), 8.25 (s, 2H), 7.87 (d, J = 6.0 Hz, 1H), 7.78 (d, J = 10.9 Hz, 1H), 6.55 (d, J = 6.2 Hz, 1H), 4.02 – 3.98 (m, 2H), 3.66 – 3.65 (m, 2H), 3.19 – 3.14 (m, 2H), 2.92 – 2.86 (m, 2H), 2.84 – 2.78 (m, 1H), 2.48 – 2.46 (m, 1H), 2.43 (s, 3H), 1.05 (d, J = 6.2 Hz, 6H). Example 440 – Preparation of N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000643_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01268] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2,7-dimethyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (73.19 mg, 0.45 mmol) in THF (10 mL) were added TEA (136.35 mg, 1.35 mmol) and triphosgene (266.4 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 25.64%) as a white solid. ESI-MS (M+H) +: 521.4. Step 2: Preparation of N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01269] A mixture of tert-butyl (2R,6S)-4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (60 mg,0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% NH3.H2O in water / CH3CN) to give title product (3.89 mg, 7.72%) as a white solid. ESI-MS (M+H) +:421.2.1H NMR (400 MHz, DMSO-d6) δ 12.01 (s, 1H), 9.39 (s, 1H), 7.89 (d, J = 6.2 Hz, 1H), 7.61 (s, 1H), 6.53 (d, J = 6.3 Hz, 1H), 4.03 – 3.97 (m, 2H), 3.64 – 3.59 (m, 2H), 3.18 – 3.12 (m, 2H), 2.84 – 2.77 (m, 2H), 2.51 (s, 3H), 2.43 – 2.40 (m, 5H), 1.00 (d, J = 6.2 Hz, 6H). Example 441 – Preparation of (S)-N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000644_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01270] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (200 mg, 0.63 mmol), 2,7-dimethyl-[1,2,4]triazolo[1,5- a]pyridin-6-amine (200 mg, 1.26 mmol), triphosgene (370 mg,1.26 mmol) and TEA (760 mg, 7.55 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered and triturated with MeOH (5 mL) to afford title product (100 mg, 31.37 %) as a yellow solid. ESI-MS (M+H) +: 507.0. Step 2: Preparation of (S)-N-(2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01271] A mixture of tert-butyl (S)-4-(1-((2,7-dimethyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (90 mg, 0.17 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (18 mg, yield: 25.04 %) as a yellow solid. ESI-MS (M+H) +: 407.2.1H NMR (400 MHz, DMSO-d6) δ 11.97 (s, 1H), 9.38 (s, 1H), 8.23 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.60 (s, 1H), 6.54 (d, J = 6.1 Hz, 1H), 4.00 (t, J = 8.3 Hz, 2H), 3.62 (d, J = 12.1 Hz, 2H), 3.14 (t, J = 8.3 Hz, 2H), 2.99 (d, J = 11.0 Hz, 1H), 2.90 – 2.79 (m, 3H), 2.60 – 2.51 (m, 1H), 2.49 (s, 3H), 2.41 (s, 3H), 1.05 (d, J = 5.9 Hz, 3H). Example 442 – Preparation of (R)-N-(8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000645_0001
Step 1: Preparation of 5-bromo-3-ethoxypyrazin-2-amine. [01272] A mixture of 3,5-dibromopyrazin-2-amine (11 g, 43.48 mmol) in EtOH (200 mL) was added EtONa (3.25 g, 47.83 mmol). The mixture was stirred at 80℃ for 16 h. The reaction mixture concentrated in vacuo and diluted with H2O (100 mL) and extracted with DCM (100 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo to give title compound (10.3 g, crude) a yellow solid. ESI-MS (M+H) +: 218.1.1H NMR (400 MHz, DMSO-d6) δ 7.57 (s, 1H), 6.47 (s, 2H), 4.31 (q, J = 7.0 Hz, 2H), 1.35 (t, J = 7.0 Hz, 3H). Step 2: Preparation of 1,2-diamino-5-bromo-3-ethoxypyrazin-1-ium. [01273] To a mixture of 5-bromo-3-ethoxypyrazin-2-amine (10.1 g, 78.91 mmol) in DCM (600 mL) was added O-(mesitylsulfonyl)hydroxylamine (33.93 g, 157.81 mmol) at 0℃, the mixture was stirred at rt for 16 h. The mixture was filtered, dried in vacuo to give title product (19 g, crude) as a yellow solid. ESI-MS (M+H) +: 235.1.1H NMR (400 MHz, DMSO-d6) δ 16.02 – 15.99 (m, 1H), 9.02 (s, 2H), 7.89 (s, 1H), 6.97 (s, 2H), 4.44 (q, J = 7.0 Hz, 2H), 1.39 (t, J = 7.1 Hz, 3H). Step 3: Preparation of 6-bromo-8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazine. [01274] To a mixture of 1,2-diamino-5-bromo-3-ethoxypyrazin-1-ium (18 g, 76.92 mmol) in AcO2 (180 mL) was added HCl (20 mL) at 0℃. The reaction solution was stirred at 100℃ for 16 h. The mixture diluted with H2O (600 mL) and the precipitate was filtered, washed with water and dried in vacuo to give title product (11 g, Y: 55.6%) as a white solid. ESI-MS (M+H) +: 258.9.1H NMR (400 MHz, DMSO-d6) δ 8.93 (s, 1H), 4.52 (q, J = 7.1 Hz, 2H), 2.50 (s, 3H), 1.42 (t, J = 7.1 Hz, 3H). Step 4: Preparation of N-(8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-1,1- diphenylmethanimine. [01275] To a mixture of 6-bromo-8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazine (5 g, 19.46 mmol), diphenylmethanimine (3.87 g, 21.40 mmol) , BINAP (2.4 g, 3.90 mmol), Pd2(dba)3 (1.79 g, 1.95 mmol) and Cs2CO3 (18.9 g, 58.37 mmol) in 1,4-dioxane (80 mL). The reaction solution was stirred at 100℃ for 16 h under N2. The reaction was filtered, the filtrate was concentrated in vacuo to give title product (11 g, crude) as a yellow oil. ESI-MS (M+H) +: 358.0. Step 5: Preparation of 8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-amine HCl salt. [01276] A mixture of N-(8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-1,1- diphenylmethanimine (10.2 g, 28.21 mmol) in 4M HCl/EA (25 mL) was stirred at RT for 2h. The mixture diluted with EA (100 mL) stirred for 16 h and filtered, the filtrate cake was dried in vacuo to give title product (2.5 g, Y: 45.2%) as a yellow solid. ESI-MS (M+H) +: 194.2.1H NMR (400 MHz, DMSO-d6) δ 7.44 (s, 1H), 5.57 (s, 2H), 4.56 – 4.34 (m, 2H), 2.38 (s, 3H), 1.39 (s, 3H). Step 6: Preparation of tert-butyl (R)-4-(1-((8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01277] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 8-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrazin-6-amine HCl salt (91.2 mg, 0.47 mmol) and TEA (475 mg, 0.47 mmol) in THF (8 mL) was added triphosgene (140 mg, 0.47 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:7) to give title product (110 mg, Y: 65.2%) as a yellow solid. ESI-MS (M+H) +: 538.3. Step 7: Preparation of (R)-N-(8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01278] A mixture of tert-butyl (R)-4-(1-((8-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine- 1-carboxylate (90 mg, 0.17 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (32 mg, Y: 43.8%) as a white solid. ESI-MS (M+H) +: 438.7.1H NMR (400 MHz, DMSO-d6) δ 12.05 (s, 1H), 8.77 (s, 1H), 8.29 (s, 1H), 7.88 (d, J = 6.1 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.53 (q, J = 7.0 Hz, 2H), 3.97 (t, J = 8.5 Hz, 2H), 3.63 – 3.60 (m, 2H), 3.11 (t, J = 8.5 Hz, 2H), 3.05 – 2.98 (m, 1H), 2.94 – 2.77 (m, 3H), 2.63 – 2.55 (m, 1H), 2.46 (s, 3H), 1.44 (t, J = 7.1 Hz, 3H), 1.07 (d, J = 6.3 Hz, 3H). Example 443 – Preparation of (S)-4-(3-methylpiperazin-1-yl)-N-(pyrrolo[1,2- b]pyridazin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000647_0001
Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-(pyrrolo[1,2-b]pyridazin-4-ylcarbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01279] To a solution of pyrrolo[1,2-b]pyridazin-4-amine (50 mg, 0.38 mmol) in THF (20 mL) were added TEA (381 mg, 3.77 mmol) and triphosgene (113 mg, 0.38 mmol) at 0 oC. The mixture was stirred for 5 minutes. Tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered, washed with H2O (5 mL) and triturated with MeOH (10 mL) to give title compound (100 mg, yield: 67%) as a grey solid. ESI-MS (M+H)+: 478.0.1H NMR (400 MHz, DMSO-d6) δ 12.73 (s, 1H), 8.10 (d, J = 6.1 Hz, 1H), 8.07 (d, J = 5.3 Hz, 1H), 7.83 – 7.80 (m, 1H), 7.38 (d, J = 5.3 Hz, 1H), 6.83 (dd, J = 4.2, 2.8 Hz, 1H), 6.70 (dd, J = 4.3, 1.4 Hz, 1H), 6.58 (d, J = 6.2 Hz, 1H), 4.18 (s, 1H), 4.03 (t, J = 8.5 Hz, 2H), 3.78 (d, J = 13.2 Hz, 1H), 3.68 (d, J = 13.1 Hz, 1H), 3.61 (d, J = 12.8 Hz, 1H), 3.14 (ddd, J = 16.6, 14.1, 5.8 Hz, 4H), 2.97 (td, J = 11.8, 3.4 Hz, 1H), 1.43 (s, 9H), 1.18 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-4-(3-methylpiperazin-1-yl)-N-(pyrrolo[1,2-b]pyridazin-4-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01280] To a solution of tert-butyl (S)-2-methyl-4-(1-(pyrrolo[1,2-b]pyridazin-4- ylcarbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (90 mg, 0.19 mmol) in EA (2 mL) was added 4M HCl/EtOAc (6 mL) at 0 oC. Then the mixture was stirred at r.t for 2 hours. The precipitate was filtered, and washed with EA (5 mL) and lyophilized to give title compound (68.43 mg, yield: 87%) as a grey solid. ESI-MS (M+H)+:378.1.1H NMR (400 MHz, DMSO-d6) δ 12.66 (s, 1H), 9.45 (s, 1H), 9.26 (s, 1H), 8.16 (d, J = 6.1 Hz, 1H), 8.08 (d, J = 5.3 Hz, 1H), 7.82 (dd, J = 2.6, 1.6 Hz, 1H), 7.38 (d, J = 5.3 Hz, 1H), 6.84 (dd, J = 4.3, 2.7 Hz, 1H), 6.73 (d, J = 1.5 Hz, 1H), 6.71 (d, J = 6.2 Hz, 1H), 4.06 – 4.04 (m, 2H), 3.83 (d, J = 14.0 Hz, 2H), 3.38 – 3.25 (m, 3H), 3.19 (t, J = 8.5 Hz, 2H), 3.13 – 3.03 (m, 2H), 1.30 (d, J = 6.5 Hz, 3H).
Example 444 – Preparation of (R)-N-(2,6-dimethyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000649_0001
Step 1: Preparation of 3-methoxypyridine 1-oxide. [01281] To a mixture of 3-methoxypyridine (50 g, 0.69 mol) in dichloromethane (500 mL) was added m-chloroperoxybenzoic acid (118.6 g, 0.6 mol) in batches in an ice-water bath, the mixture was stirred at room temperature overnight. The mixture was diluted with saturated Aqueous sodium sulfite solution (700 mL), after stirring for 30 minutes, was added saturated aqueous sodium bicarbonate solution (500 mL), extracted with dichloromethane (1200 mL×10), The organic layer was dried with Na2SO4 and concentration in vacuo to give the title compound (105 g, crude) as an off-white solid. ESI-MS (M+H) +:126.1. Step 2: Preparation of 3-methoxy-4-nitropyridine 1-oxide. [01282] A solution of 3-methoxypyridine-N-oxide (105 g, 0.84 mol) and con. H2 SO4 (200 mL) was carefully prepared by adding the acid slowly to the solid N-oxide using an ice bath for cooling. After solution is effected, it is rapidly stirred and fuming nitric acid (202 mL) is added over 30 min. The reaction mixture was warmed to 75° C for 5 hours. The contents were poured onto ice and neutralized to pH 9 with cooling using 50% NaOH. The mixture was extracted three times with CH2Cl2, dried over Na2 SO4 and solvent evaporated under reduced pressure to produce an oil. The crude product was chromatographed on silica gel using CH2 Cl2 / MeOH (99:1) as the eluent to give title product (17.4 g 24.38 %) as a crystalline solid. ESI-MS (M+H) +:171.1.1H NMR (400 MHz, CDCl3) δ 8.12 (d, J = 1.3 Hz, 1H), 7.93 (d, J = 7.1 Hz, 1H), 7.88 (dd, J = 7.1, 1.5 Hz, 1H), 4.03 (s, 3H). Step 3: Preparation of 3-methoxypyridin-4-amine. [01283] The compound 3-methoxy-4-nitropyridine 1-oxide (8 g, 94.05 mmol) was dissolved in methanol (500 mL), Nickel in water (20 mL) was added at room temperature and stirred under a hydrogen atmosphere overnight. The mixture was filtered, washed with MeOH and the filtrate was concentrated to give the title compound (6.7 g, crude) as a yellow oil. ESI-MS (M+H) +:125.2.1H NMR (400 MHz, CDCl3) δ 7.99 (d, J = 13.9 Hz, 2H), 6.58 (s, 1H), 4.30 (s, 2H), 2.07 (s, 3H). Step 4: Preparation of tert-butyl (3-methoxypyridin-4-yl)carbamate. [01284] To a mixture of 3-methoxypyridin-4-amine (13.5 g, 108.75 mmol) in EA (300 mL) was added Boc2O (30.85 g, 141.37 mmol). The reaction solution was stirred at 80 ℃ for 3 h. After cooled to r.t, the mixture was diluted with H2O (500 mL), then the mixture was extracted with EA (400 mL * 3). The organic layer was washed with brine, dried over Na2SO4 and evaporated to give the title product (18.4 g, 75.45 %) as a yellow solid. ESI-MS (M+H) +:225.1.1H NMR (400 MHz, CDCl3) δ 8.17 (d, J = 5.3 Hz, 1H), 8.02 (d, J = 5.1 Hz, 1H), 7.22 (s, 1H), 3.96 (s, 3H), 1.54 (s, 9H). Step 5: Preparation of 1-amino-4-((tert-butoxycarbonyl)amino)-3-methoxypyridin-1-ium 2,4- dinitrophenolate. [01285] To a mixture of tert-butyl (3-methoxypyridin-4-yl)carbamate (17.40 g, mmol) in ACN (250 mL) was added O-(2,4-dinitrophenyl)hydroxylamine (30.90 g, 155.18 mmol). The reaction solution was stirred at 50oC for 16 h. The mixture was concentrated to give title product (48 g, crude) as a yellow solid and used at next step without further operation. ESI- MS (M+H) +:240.1. Step 6: Preparation of ethyl 5-((tert-butoxycarbonyl)amino)-6-methoxypyrazolo[1,5- a]pyridine-3-carboxylate (DP) and ethyl 5-((tert-butoxycarbonyl)amino)-4- methoxypyrazolo[1,5-a]pyridine-3-carboxylate (BP). [01286] To a mixture of 1-amino-4-((tert-butoxycarbonyl)amino)-3-methoxypyridin-1- ium 2,4-dinitrophenolate (48 g, 113.37 mmol) and ethyl propiolate (12.64 mL, 124.71 mmol) in DMF (600 mL) was added K2CO3 ( 21.94 g, 21.94 mmol). The reaction solution was stirred at rt. for 16 h. The mixture was concentrated and diluted with water (500 mL), extracted with DCM (600 mL×3). The organic layer was washed with brine, dried with Na2SO4 and concentration in vacuo to give crude. The crude was purified by silica gel column chromatography (PE: EA= 4:1-2:1) to give the DP (7.2 g, 18.94 %) as a yellow solid and the BP (7 g, 18.41 %) as a yellow solid. [01287] DP: ESI-MS (M+H) +:336.1.1H NMR (400 MHz, CDCl3) δ 8.73 (s, 1H), 8.25 (s, 1H), 8.03 (s, 1H), 4.40 – 4.35 (m, 2H), 3.94 (s, 3H), 1.56 (s, 9H), 1.42 (s, 3H). [01288] BP: ESI-MS (M+H) +:336.11H NMR (400 MHz, CDCl3) δ 8.36 (s, 1H), 8.29 (d, J = 7.6 Hz, 1H), 8.01 (d, J = 7.6 Hz, 1H), 7.32 (s, 1H), 4.35 (t, J = 7.1 Hz, 2H), 3.89 (s, 3H), 1.56 (s, 9H), 1.40 (t, J = 7.1 Hz, 3H). Step 7: Preparation of 6-methoxypyrazolo[1,5-a]pyridin-5-amine. [01289] A solution of ethyl 5-((tert-butoxycarbonyl)amino)-6-methoxypyrazolo[1,5- a]pyridine-3-carboxylate (6.85 g, 20.43 mmol) in concentrated sulfuric acid (78 mL, 98%) and water (80 mL) were stirred at 100 ° C for 16 hours. The Sodium hydroxide aqueous solution (6M) was adjusted to a pH greater than 7, extracted with DCM (3 x 100 mL), dry over anhydrous sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA= 1: 3) to give the compound (1.3 g, 39.00 %) as a yellow solid. ESI-MS (M+H) +:164.1.1H NMR (400 MHz, CDCl3) δ 7.95 (s, 1H), 7.71 (d, J = 2.2 Hz, 1H), 6.57 (s, 1H), 6.11 (d, J = 1.8 Hz, 1H), 3.88 (s, 3H). Step 8: Preparation of tert-butyl (R)-4-(1-((6-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01290] To a solution of 6-methoxypyrazolo[1,5-a]pyridin-5-amine (92 mg, 0.56 mmol) and TEA (572 mg, 5.65 mmol) in THF (12 mL) was added triphosgene (167.7 mg, 0.56 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (40 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (90 mg, 37.64 %) as a white solid. ESI-MS (M+H) +:508.4.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 8.42 (s, 1H), 8.36 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.80 – 7.77 (m, 1H), 6.53 (d, J = 6.1 Hz, 1H), 6.40 (d, J = 2.0 Hz, 1H), 4.22 – 4.14 (m, 1H), 4.04 – 4.00 (m, 2H), 3.99 (s, 3H), 3.81 – 3.75 (m, 1H), 3.68 – 3.62 (m, 1H), 3.58 (d, J = 14.2 Hz, 1H), 3.21 – 3.12 (m, 3H), 3.10 – 3.04 (m, 1H), 2.98 – 2.89 (m, 1H), 1.42 (s, 9H), 1.19 (d, J = 6.6 Hz, 3H). Step 9: Preparation of tert-butyl (R)-4-(1-((6-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01291] To a mixture of tert-butyl (R)-4-(1-((6-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.16 mmol) in EA (2 mL) was added 4M HCl/EA (3 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with DCM: MeOH (8 Ml, 10:1), then filtered and lyophilized to give title product (60 mg, 93.43 %) as an off-white solid. ESI-MS (M+H) +:408.2.1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 9.81 (d, J = 44.9 Hz, 2H), 8.43 (s, 1H), 8.32 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 7.82 (d, J = 1.4 Hz, 1H), 6.65 (d, J = 6.0 Hz, 1H), 6.44 (s, 1H), 4.06 – 4.01 (m, 2H), 3.99 (s, 3H), 3.85 – 3.76 (m, 2H), 3.37 – 3.27 (m, 3H), 3.20 – 3.03 (m, 4H), 1.33 (d, J = 6.4 Hz, 3H). Example 445 – Preparation of (R)-N-(2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000652_0001
Compound 445 Step 1: Preparation of 2,4-dimethylpyridin-3-amine. [01292] To a solution of 2,4-dimethyl-3-nitropyridine (25 g, 0.16 mol) in EtOH (250 mL) was added Pd/C (10% wt, 2.5 g). The mixture was stirred at r.t for 16 h under H2. The mixture was filtered and the filtrate was concentrated in vacuo to give crude title product (16 g, 81.97%) as a brown solid. ESI-MS (M+H) +: 123.1. Step 2: Preparation of 6-bromo-2,4-dimethylpyridin-3-amine. [01293] To a mixture of 2,4-dimethylpyridin-3-amine (16 g, 131.15 mmol) in CAN (160 mL) was added 1-bromopyrrolidine-2,5-dione (21.01 g, 118.04 mmol). The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo and purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (10 g, 38.12%) as a yellow solid. ESI-MS (M+H) +: 201.3.1H NMR (400 MHz, DMSO-d6) δ 7.03 (s, 1H), 4.96 (s, 2H), 2.25 (s, 3H), 2.08 (s, 3H). Step 3: Preparation of 5-bromo-7-methyl-2H-pyrazolo[3,4-c]pyridine. [01294] To a mixture of 6-bromo-2,4-dimethylpyridin-3-amine (10 g, 50 mmol), KOAc (9.70 g, 100 mmol) in CHCl3 (100 mL) was added Ac2O (23.6 g, 200 mmol). The mixture was stirred at r.t for 1 h. Then tert-Butyl nitrite (10.30 g, 100 mmol) and 18-Crown-6 (1.32 g, 5 mmol) were added to the mixture and stirred at 70 oC for 16 h. The mixture was concentrated in vacuo, the residue in MeOH (100 mL) was added K2CO3 (34.50 g, 250 mmol) and stirred at r.t for 16 h. The mixture was diluted with H2O (100 mL) and extracted with DCM (100 mL). The organic phase was washed with brine (100 mL x 3), dried over anhydrous Na2SO4 and concentrated to afford title product (6.5 g, 61.62%) as a yellow solid. ESI-MS (M+H) +: 212.2. Step 4: Preparation of 5-bromo-2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine. [01295] A mixture of 5-bromo-7-methyl-2H-pyrazolo[3,4-c]pyridine (6.5 g, 30.81 mmol) in EA (70 mL) was added trimethyloxonium tetrafluoroborate (5.47 g, 36.98 mmol). The mixture was stirred at r.t for 3 h. The mixture was diluted with H2O (70 mL) and extracted with EA (70 mL x 3). The organic phase was washed with brine (70 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (6.0 g, 88.36%) as a yellow solid. ESI-MS (M+H) +: 226.3. Step 5: Preparation of methyl 2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine-5-carboxylate. [01296] To a mixture of 5-bromo-2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine (6.0 g, 26.67 mmol) in MeOH (60 mL) were added TEA (8.08 mg, 80.01 mmol) and Pd(dppf)Cl2 (1.94 g, 2.67 mmol). The mixture was stirred at 80 oC for 16 h under CO. The mixture was diluted with H2O (60 mL) and extracted with EA (60 mL x 3). The organic phase was washed with brine (60 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (1 g, 18.29%) as a white solid. ESI-MS (M+H) +: 206.5. Step 6: Preparation of 2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine-5-carboxylic acid. [01297] To a mixture of methyl 2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine-5- carboxylate (1 g, 4.88 mmol) in MeOH (5 mL), THF(10 mL) and H2O (2 mL) was added LiOH (585.12 mg, 24.39 mmol). The reaction solution was stirred at RT for 16 h. After concentration to remove most of MeOH, the aqueous phase was adjusted to pH to 5, extracted with EA (10 mLx3). The organic layer was washed with brine, dried over Na2SO4, filtered and evaporated to give title product (400 mg, 42.91%) as a white solid. ESI-MS (M+H) +: 148.5. Step 7: Preparation of tert-butyl (R)-4-(1-((2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01298] To a solution of 2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine-5-carboxylic acid (100 mg, 0.52 mmol) in Toluene (10 mL) were added TEA (158.64 mg, 1.57 mmol) and DPPA (286 mg, 1.04 mmol). The mixture was stirred at r.t for 1h. Then the mixture was stirred at 60 oC for another 1h. tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (198.43 mg, 0.62 mmol) was added to the mixture and stirred at 90 oC for 16h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:3) to provide title product (80 mg, 30.40%) as a white solid. ESI-MS (M+H)+: 507.5. Step 8: Preparation of (R)-N-(2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01299] A solution of tert-butyl (R)-4-(1-((2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (2.23 mg, 3.08 %) as a white solid. ESI-MS (M+H) +: 407.2.1H NMR (400 MHz, DMSO-d6) δ 11.88 (s, 1H), 8.31 (s, 2H), 8.00 (s, 1H), 7.94 (d, J = 6.0 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.20 (s, 3H), 4.02 – 3.96 (m, 2H), 3.60 – 3.57 (m, 2H), 3.14 – 3.09 (m, 2H), 2.97 – 2.93 (m, 1H), 2.91 – 2.73 (m, 4H), 2.70 (s, 3H), 1.03 (d, J = 6.2 Hz, 3H). Example 446 – Preparation of (R)-N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000655_0001
Step 1: Preparation of 5-bromo-3-methylpyrazin-2-amine. [01300] To a mixture of 5-bromo-3-methylpyrazin-2-amine (23.3 g, 213.76 mmol) and NBS (38.05 g, 213.76 mmol) in CHCl3 (250 mL) was stirred at RT for 3 h. The mixture diluted with H2O (200 mL) and extracted with DCM (100 mL x3). The organics were washed with brine, dried with Na2SO4 and concentrated in vacuo to give title product (45 g, crude) as a yellow solid. ESI-MS (M+H) +: 190.0.1H NMR (400 MHz, DMSO-d6) δ 7.89 (s, 1H), 6.43 (s, 2H), 2.26 (s, 3H). Step 2: Preparation of 1,2-diamino-5-bromo-3-methylpyrazin-1-ium. [01301] To a mixture of 5-bromo-3-methylpyrazin-2-amine (20 g, 106.38 mmol) in DCM (900 mL) was added O-(mesitylsulfonyl)hydroxylamine (47.74 g, 212.77 mmol) at 0℃ , the mixture was stirred at rt for 16 h. The precipitate was filtered, dried in vacuo to give title product (34 g, crude) as a yellow solid. ESI-MS (M+H) +: 205.0. Step 3: Preparation of 6-bromo-2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazine. [01302] To a mixture of 1,2-diamino-5-bromo-3-methylpyrazin-1-ium (30 g, 159.57 mmol) in AcO2 (300 mL) was added HCl (34 mL) at 0℃. The reaction solution was stirred at 120℃ for 8 h. The mixture diluted with H2O (1000 mL) and the precipitate was filtered, washed with water and dried in vacuo to give title product (14 g, Y: 38.9%) as a yellow solid. ESI-MS (M+H) +: 229.0.1H NMR (400 MHz, DMSO-d6) δ 9.25 (s, 1H), 2.75 (s, 3H), 2.54 (s, 3H). Step 4: Preparation of N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-1,1- diphenylmethanimine. [01303] A mixture of 6-bromo-2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazine (5 g, 21.8 mmol), diphenylmethanimine (4.3 g, 24.0 mmol), BINAP (2.7 g, 4.4 mmol), Pd2(dba)3 (2.1 g, 2.2 mmol) and Cs2CO3 (20.3 g, 65.5 mmol) in 1,4-dioxane (100 mL) was stirred at 100℃ for 16 h under N2. The reaction was filtered, the filtrate was concentrated in vacuo to give title product (11 g, crude) as a brown solid. ESI-MS (M+H) +: 328.3. Step 5: Preparation of 2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-amine HCl salt. [01304] A mixture of N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-1,1- diphenylmethanimine (10.1 g, 30.79 mmol) in 4M HCl / EA (100 mL) was stirred at RT for 3h. The mixture was diluted with EA (400 mL) and stirred for 16 h. The precipitate was filtered, and dried in vacuo to give title product (3.6 g, Y: 72.0%) as a brown solid. ESI-MS (M+H) +: 164.2. Step 6: Preparation of tert-butyl (R)-4-(1-((2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01305] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 2,8-dimethyl-[1,2,4]triazolo[1,5- a]pyrazin-6-amine HCl salt (92.5 mg, 0.56 mmol) and TEA (854 mg, 8.46 mmol) in THF (12 mL) was added triphosgene (251 mg, 0.85 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:6) to give title product (110 mg, Y: 65.2%) as a yellow solid. ESI-MS (M+H) +: 508.4. Step 7: Preparation of (R)-N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01306] A mixture of tert-butyl (R)-4-(1-((2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (90 mg, 0.18 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo to give title product (42 mg, Y: 58.1%) as a white solid. ESI-MS (M+H) +: 408.1.1H NMR (400 MHz, DMSO-d6) δ 9.68 (t, J = 64.2 Hz, 2H), 9.09 (s, 1H), 7.97 (s, 1H), 6.72 (s, 1H), 4.16 – 4.00 (m, 2H), 3.97 – 3.72 (m, 2H), 3.45 – 3.29 (m, 3H), 3.29 – 2.98 (m, 4H), 2.76 (s, 3H), 1.31 (d, J = 6.4 Hz, 3H). Example 447 – Preparation of (R)-N-(4-methoxypyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000657_0001
Step 1: Preparation of 4-methoxypyrazolo[1,5-a]pyridin-5-amine. [01307] A mixture of ethyl 5-((tert-butoxycarbonyl)amino)-4-methoxypyrazolo[1,5- a]pyridine-3-carboxylate (6.6 g, 19.68 mmol) in concentrated sulfuric acid (70 mL, 98%) and water (70 mL) was stirred at 100 ° C for 16 hours. The sodium hydroxide aqueous solution (6 M) was adjusted to a pH greater than 7, extracted with DCM (3*100 mL), Dry over anhydrous sodium sulfate, filtered and concentrated invacuo to obtain the title compound (2.9 g, 90.30%) as a brown solid. ESI-MS (M+H) +:164.1.1H NMR (400 MHz, CDCl3) δ 8.03 (d, J = 7.3 Hz, 1H), 7.73 (d, J = 2.1 Hz, 1H), 6.27 – 6.22 (m, 2H), 3.85 (s, 3H). Step 2: Preparation of tert-butyl (R)-4-(1-((4-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01308] To a solution of 4-methoxypyrazolo[1,5-a]pyridin-5-amine (92 mg, 0.56 mmol) and TEA (572 mg, 5.65 mmol) in THF (12 mL) was added triphosgene (167 mg, 0.56 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (40 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (130 mg, 54.37 %) as a white solid. ESI-MS (M+H) +:508.4.1H NMR (400 MHz, DMSO-d6) δ 12.39 (s, 1H), 8.47 (d, J = 7.6 Hz, 1H), 8.00 – 7.95 (m, 2H), 7.92 (d, J = 2.3 Hz, 1H), 6.60 (d, J = 2.1 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.22 – 4.14 (m, 1H), 4.05 – 4.00 (m, 2H), 3.99 (s, 3H), 3.81 – 3.76 (m, 1H), 3.68 – 3.63 (m, 1H), 3.61 – 3.57 (m, 1H), 3.20 – 3.12 (m, 3H), 3.10 – 3.05 (m, 1H), 2.97 – 2.90 (m, 1H), 1.19 (d, J = 6.6 Hz, 3H). Step 3: Preparation of (R)-N-(4-methoxypyrazolo[1,5-a]pyridin-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.. [01309] To a mixture of tert-butyl (R)-4-(1-((4-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (120 mg, 0.24 mmol) in EA (3 mL) was added 4 M HCl/EA (5 mL), the mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with DCM: MeOH (8 mL, 10:1), then filtered and lyophilized to give title product (80 mg, 83.05 %) as an off-white solid. ESI-MS (M+H) +:408.4.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 9.60 (d, J = 54.1 Hz, 2H), 8.48 (d, J = 7.6 Hz, 1H), 7.99 (d, J = 5.6 Hz, 1H), 7.94 (d, J = 2.1 Hz, 2H), 6.69 – 6.68 (m, 1H), 6.64 – 6.62 (m, 1H), 4.12 – 4.03 (m, 2H), 4.00 (s, 3H), 3.88 – 3.77 (m, 2H), 3.41 – 3.30 (m, 3H), 3.24 – 3.05 (m, 4H), 1.32 (d, J = 6.4 Hz, 3H).
Example 448 – Preparation of (R)-N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000659_0001
Step 4 p
Figure imgf000659_0002
Step 1: Preparation of 5-bromo-4-methoxypyrimidin-2-amine. [01310] A mixture of 4-methoxypyrimidin-2-amine (25 g, 200 mmol) and NBS (35.6 g, 200 mmol) in CHCl3 (250 mL) was stirred at RT for 5 h. The mixture was diluted with H2O (500 mL) and the precipitate was filtered, washed with water and dried in vacuo to give title product (45 g, crude) as a white solid. ESI-MS (M+H) +: 206.0.1H NMR (400 MHz, DMSO-d6) δ 8.09 (s, 1H), 6.81 (s, 2H), 3.87 (s, 3H). Step 2: Preparation of 1,2-diamino-5-bromo-4-methoxypyrimidin-1-ium. [01311] To a mixture of 5-bromo-4-methoxypyrimidin-2-amine (25 g, 122.55 mmol) in DCM (1000 mL) was added O-(mesitylsulfonyl)hydroxylamine (52.70 g, 245.10 mmol) at 0℃, the mixture was stirred at rt for 16 h. The precipitate was filtered and dried in vacuo to give title product (40 g, crude) as a yellow solid. ESI-MS (M+H) +: 220.9. Step 3: Preparation of 6-bromo-5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidine. [01312] To a mixture of 1,2-diamino-5-bromo-4-methoxypyrimidin-1-ium (23 g, 105.0 mmol) in AcO2 (230 mL) was added TsOH (3.6 g, 21.00 mmol) at 0℃. The reaction solution was stirred at 100 ℃ for 16 h. The mixture diluted with H2O (200 mL) and the precipitate was filtered, washed with water and dried in vacuo to give title product (11 g, Y: 44.0%) as a yellow solid. ESI-MS (M+H) +: 245.0.1H NMR (400 MHz, DMSO-d6) δ 9.57 (s, 1H), 4.05 (s, 3H), 2.41 (s, 3H). Step 4: Preparation of N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-1,1- diphenylmethanimine. [01313] A mixture of 6-bromo-5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidine (5 g, 20.58 mmol) , diphenylmethanimine (4.1 g, 22.630 mmol) , BINAP (1.28 g, 2.06 mmol), Pd2(dba)3 (943 mg, 1.03 mmol) and Cs2CO3 (20.1 g, 61.73 mmol) in 1,4-dioxane (100 mL) was stirred at 110℃ for 16 h under N2. The reaction was filtered, the filtrate concentrated in vacuo to give title product (11 g, crude) as a brown solid. ESI-MS (M+H) +: 344.0. Step 5: Preparation of 5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-amine. [01314] A mixture of N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)- 1,1-diphenylmethanimine (10.1 g, 29.36 mmol) in 4M HCl/EA (100 mL) was stirred at RT for 3h. The mixture diluted with 1M NaOH (50 mL), extracted with DCM:MeOH=10:1 (100 mL x3) The organic layer was concentrated in vacuo and purified by silica gel column (DCM:MeOH =1:100) to give title product (2 g, Y:38.1%) as a yellow solid. ESI-MS (M+H) +: 180.1. Step 6: Preparation of tert-butyl (R)-4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate. [01315] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-amine (85 mg, 0.47 mmol) and TEA (475 mg, 4.70 mmol) in THF (8 mL) was added triphosgene (140 mg, 0.47 mmol) at 0oC, the mixture was stirred at RT for 16 h . The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:6) to give title product (110 mg, Y: 67.0%) as a yellow solid. ESI-MS (M+H) +: 524.3. Step 7: Preparation of (R)-N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01316] A mixture of tert-butyl (R)-4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (90 mg, 0.17 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo to give title product (52.4 mg, Y: 72.0%) as a yellow solid. ESI-MS (M+H) +: 424.4.1H NMR (400 MHz, DMSO-d6) δ 11.91 (s, 1H), 9.75 (s, 1H), 9.61 (d, J = 8.9 Hz, 1H), 9.35 (s, 1H), 7.89 (d, J = 6.1 Hz, 1H), 6.62 (d, J = 5.8 Hz, 1H), 4.17 (s, 3H), 4.04 – 3.99 (m, 2H), 3.40 – 3.26 (m, 4H), 3.25 – 3.01 (m, 5H), 2.45 (s, 3H), 1.32 (d, J = 6.3 Hz, 3H). Example 449 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000661_0001
Step 1: Preparation of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [01317] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 2,8-dimethylimidazo[1,2-a]pyrazin- 6-amine (58 mg, 0.36 mmol) and TEA (456 mg, 4.51 mmol) in THF (8 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:8) to give title product (70 mg, Y: 44.3%) as a white solid. ESI-MS (M+H) +: 521.3. Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(3,3-dimethylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01318] A mixture of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (60 mg, 0.12 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo to give title product (45 mg, Y: 92.8%) as a white solid. ESI-MS (M+H) +: 421.2.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.57 (s, 2H), 9.22 (s, 1H), 8.31 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 6.67 (d, J = 5.8 Hz, 1H), 4.08 – 4.03 (m, 2H), 3.56 – 3.49 (m, 2H), 3.36 (s, 2H), 3.27 – 3.16 (m, 4H), 2.82 (s, 3H), 2.54 (s, 3H), 1.40 (s, 6H). Example 451 – Preparation of (R)-N-(7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000662_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01319] A mixture of 7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridine-5-carboxylic acid (156 mg, 0.75 mmol), TEA (190 mg, 1.88 mmol) and DPPA (259 mg, 0.94 mmol) in tol (4 mL) was stirred at RT for 1 h, heated to 70 oC and stirred for 0.5h, tert-butyl (R)-4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.63 mmol) was added to the mixture and stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 8) to give title product (50 mg, Y: 15.2%) as a yellow solid. ESI-MS (M+H) +: 523.7. Step 2: Preparation of (R)-N-(7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01320] A mixture of tert-butyl (R)-4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4- c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (40 mg, 0.08 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (4.5 mg, Y: 14.1 %) as a yellow solid. ESI-MS (M+H) +: 423.2.1H NMR (400 MHz, MeOD-d4) δ 8.49 (s, 1H), 8.06 (s, 1H), 7.99 (d, J = 5.9 Hz, 1H), 7.67 (s, 1H), 6.56 (d, J = 6.0 Hz, 1H), 4.18 (s, 3H), 4.11 (s, 3H), 4.10 – 4.03 (m, 2H), 3.78 – 3.70 (m, 2H), 3.45 – 3.36 (m, 2H), 3.26 – 3.07 (m, 4H), 2.96 – 2.88 (m, 1H), 1.36 (d, J = 6.6 Hz, 3H). Example 452 – Preparation of (S)-N-(6-methoxypyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000663_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01321] To a solution of 6-methoxypyrazolo[1,5-a]pyridin-5-amine (92 mg, 0.56 mmol) and TEA (572 mg, 5.65 mmol) in THF (12 mL) was added triphosgene(167 mg, 0.56 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added at 0 oC. The mixture was diluted with water (45 mL). The precipitate was filtered and triturated with MeOH (8 mL) to give the compound (60 mg, 25.09 %) as a white solid. ESI-MS (M+H) +:508.0. Step 2: Preparation of (S)-N-(6-methoxypyrazolo[1,5-a]pyridin-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01322] To a mixture of tert-butyl (S)-4-(1-((6-methoxypyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (2 mL) was added HCl/EA (4 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and triturated with DCM: MeOH (8 mL, 10:1), then filtered and lyophilized to give title product (30 mg, 74.74 %) as an off-white solid. ESI-MS (M+H) +:408.2.1H NMR (400 MHz, DMSO-d6) δ 12.22 (s, 1H), 9.69 (d, J = 50.6 Hz, 2H), 8.43 (s, 1H), 8.34 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 7.80 (d, J = 2.1 Hz, 1H), 6.64 (d, J = 6.1 Hz, 1H), 6.42 (d, J = 1.8 Hz, 1H), 4.06 – 4.01 (m, 2H), 3.99 (s, 3H), 3.82 – 3.78 (m, 2H), 3.32 (t, J = 11.0 Hz, 3H), 3.20 – 3.04 (m, 4H), 1.32 (d, J = 6.5 Hz, 3H). Example 453 – Preparation of (S)-N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000664_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01323] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2,8-dimethylimidazo[1,2-a]pyrazin- 6-amine (61 mg, 0.38 mmol) and TEA (475 mg, 4.70 mmol) in THF (8 mL) was added triphosgene (140 mg, 0.47 mmol) at 0oC, the mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA=1:8) to give title product (80 mg, Y: 49.2%) as a pink solid. ESI-MS (M+H) +: 507.2. Step 2: Preparation of (S)-N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01324] A mixture of tert-butyl (S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (70 mg, 0.14 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo to give title product (55 mg, Y: 97.9 %) as a yellow solid. ESI-MS (M+H) +: 407.2.1H NMR (400 MHz, DMSO-d6) δ 12.25 (s, 1H), 9.72 (s, 1H), 9.59 (s, 1H), 9.22 (s, 1H), 8.32 (s, 1H), 8.00 (d, J = 6.1 Hz, 1H), 6.68 (d, J = 6.0 Hz, 1H), 4.06 – 4.03 (m, 2H), 3.84 – 3.80 (m, 2H), 3.38 – 3.29 (m, 3H), 3.20 (t, J = 8.2 Hz, 2H), 3.15 – 3.02 (m, 2H), 2.84 (s, 3H), 2.54 (s, 3H), 1.32 (d, J = 6.2 Hz, 3H). Example 454 – Preparation of (S)-N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000665_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((3-methoxy-2-methylpyridin-4-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [01325] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.314 mmol), 2,8-dimethyl-[1,2,4]triazolo[1,5- a]pyrazin-6-amine (62 mg, 0.377 mmol), triphosgene (112 mg, 0.377 mmol) and TEA (381 mg, 3.774 mmol) in THF (5 mL) was stirred at 0 oC for 20 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The residue was beated with MeOH (5 mL*2) to afford title product (30 mg, 18.8%) as a white solid. ESI-MS (M+H) +: 508.4.1H NMR (400 MHz, DMSO-d6) δ 12.23 (s, 1H), 9.11 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 6.56 (d, J = 6.1 Hz, 1H), 4.03 (t, J = 8.6 Hz, 2H), 3.79 (d, J = 13.3 Hz, 1H), 3.68 – 3.57 (m, 3H), 3.31 – 3.30 (m, 3H), 3.18 – 3.13 (m, 3H), 3.11 – 3.06 (m, 1H), 3.00 – 2.90 (m, 1H), 2.75 (s, 3H), 1.43 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01326] A mixture of tert-butyl (S)-4-(1-((3-methoxy-2-methylpyridin-4- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (30 mg, 0.059 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the solid was lyophilized to give title product (13.5 mg, 51.5 %) as a white solid. ESI-MS (M+H) +: 408.0.1H NMR (400 MHz, DMSO-d6+D2O) δ 9.11 (s, 1H), 8.02 (d, J = 6.2 Hz, 1H), 6.67 (d, J = 6.9 Hz, 1H), 4.10 – 4.02 (m, 2H), 3.82 (d, J = 13.2 Hz, 2H), 3.61 – 3.60 (m, 3H), 3.43 – 3.34 (m, 2H), 3.26 – 3.10 (m, 4H), 3.09 – 2.98 (m, 1H), 2.76 (s, 3H), 1.29 (d, J = 6.4 Hz, 3H). Example 455 – Preparation of (S)-N-(7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000666_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01327] To a solution of 7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (63 mg, 0.38 mmol) and TEA (381 mg, 3.77 mmol) in THF (12 mL) was added triphosgene (112 mg, 0.38 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2-methylpiperazine-1-carboxylate (100 mg,0.31 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo, the residue was purified by silica gel column (PE: EA = 1:3) to give the compound (100 mg, 63 %) as a white solid. ESI- MS (M+H) +:511.2.1H NMR (400 MHz, DMSO-d6) δ 8.13 (d, J = 8.2 Hz, 1H), 7.74 – 7.69 (m, 1H), 7.69 – 7.65 (m, 1H), 7.49 (d, J = 11.2 Hz, 1H), 4.22 (t, J = 6.4 Hz, 2H), 3.80 – 3.70 (m, 2H), 3.65 – 3.57 (m, 2H), 3.22 – 3.17 (m, 2H), 2.69 – 2.65 (m, 1H), 2.44 (s, 2H), 2.35 (s, 3H), 1.40 (s, 9H), 1.36 (s, 3H). Step 2: Preparation of (S)-N-(7-fluoro-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01328] To a mixture of tert-butyl (S)-4-(1-((7-fluoro-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (80 mg, 0.16 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title product (36.31 mg, 50%) as a white solid. ESI-MS (M+H) +:411.0.1H NMR (400 MHz, DMSO-d6) δ 12.27 (d, J = 2.2 Hz, 1H), 9.42 (d, J = 6.8 Hz, 1H), 8.23 (s, 1H), 7.86 (d, J = 6.1 Hz, 1H), 7.77 (d, J = 10.9 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.02 – 3.97 (m, 2H), 3.62 (d, J = 12.3 Hz, 2H), 3.14 (t, J = 8.5 Hz, 2H), 3.00 (d, J = 11.6 Hz, 1H), 2.93 – 2.75 (m, 3H), 2.60 – 2.53 (m, 1H), 2.43 (s, 3H), 1.06 (d, J = 6.3 Hz, 3H). Example 456 – Preparation of (S)-N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000667_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01329] To a mixture of 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylic acid (91 mg, 0.47 mmol) in toluene (5 mL) were added TEA (127 mg, 1.26 mmol), DPPA (242 mg, 0.88 mmol). The mixture was stirred at r.t for 1 h and warmed up to 90oC and stirred for 1 h. tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added to the mixture and stirred at 100oC for 4 h. The mixture was diluted with water (20 mL) and the precipitate was filtered and concentrated in vacuo to give the title compound (100 mg, Y: 63.5 %) as a brown solid. ESI-MS (M+H) +:508.3. Step 2: Preparation of (S)-N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01330] To a solution of tert-butyl (S)-4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (90 mg, 0.18 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (90 mg, 97.3 %) as a white solid. ESI-MS (M+H)+:408.2. 1H NMR (400 MHz, MeOD-d4) δ 9.63 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.58 (d, J = 6.0 Hz, 1H), 4.09 (t, J = 8.6 Hz, 2H), 3.86 – 3.80 (m, 2H), 3.52 – 3.46 (m, 2H), 3.29 – 3.21 (m, 2H), 3.19 – 3.15 (m, 2H), 3.01 (dd, J = 13.7, 10.5 Hz, 1H), 2.77 (s, 3H), 2.51 (s, 3H), 1.40 (d, J = 6.6 Hz, 3H). Example 457 – Preparation of (R)-N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000668_0001
Compound 457 Step 1: Preparation of tert-butyl (R)-4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01331] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-amine (130 mg, 0.57 mmol) in THF (5 mL), TEA (143 mg, 1.42 mmol) was added triphosgene (168 mg, 0.57 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (10 mL) and filtered. The residue was triturated with MeOH (5mL), filtered and concentrated in vacuo to get title product (60 mg, Y: 23.7 %) as a brown solid. ESI-MS (M+H) +:537.4. Step 2: Preparation of (R)-N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01332] To a solution of tert-butyl (R)-4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% NH3.H2O in water / ACN) to give title compound (6.96 mg, 17.1 %) as a yellow solid. ESI-MS (M+H)+:437.2. 1H NMR (400 MHz, MeOD-d4) δ 8.46 (s, 1H), 8.22 (s, 1H), 7.82 (d, J = 7.0 Hz, 1H), 6.93 (d, J = 7.1 Hz, 1H), 4.57 (q, J = 7.0 Hz, 2H), 4.41 – 4.35 (m, 2H), 4.26 – 4.19 (m, 2H), 4.17 (s, 3H), 3.61 – 3.50 (m, 5H), 3.41 – 3.35 (m, 2H), 1.48 (t, J = 7.0 Hz, 3H), 1.44 (d, J = 6.2 Hz, 3H). Example 458 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000669_0001
Step 1: Preparation of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01333] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-amine (124 mg, 0.54 mmol), TEA (137 mg, 1.36 mmol) in THF (5 mL) was added triphosgene (161 mg, 0.54 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL), the precipitate was filtered and triturated with MeOH (5mL) to get title product (60 mg, Y: 24.1 %) as a brown solid. ESI-MS (M+H) +:551.4. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01334] To a solution of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% NH3.H2O in water / ACN) to give title compound (7.01 mg, 17.1 %) as a red solid. ESI-MS (M+H)+:451.3. 1H NMR (400 MHz, MeOD-d4) δ 8.47 (s, 1H), 8.13 (s, 1H), 7.87 – 7.83 (m, 1H), 6.88 (s, 1H), 4.55 (q, J = 7.1 Hz, 2H), 4.38 – 4.31 (m, 2H), 4.14 (s, 3H), 3.91 – 3.81 (m, 2H), 3.72 – 3.63 (m, 2H), 3.50 – 3.45 (m, 4H), 1.51 – 1.48 (m, 9H).
Example 459 – Preparation of N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000671_0001
Step 1: Preparation of 4-bromo-5-methoxy-2-nitroaniline. [01335] To a mixture of 5-methoxy-2-nitroaniline (60 g, 357.14 mmol) in ACN (600 mL) were added NBS (63.4 g, 357.14 mmol). The reaction mixture was stirred at 70˚C for 2 h. The mixture was diluted with water (600 mL) and stirred at r.t for 20 min. The precipitate was filtered, washed with H2O (400 mL) and dried to give the title product (80 g, 90%) as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ 8.13 (s, 1H), 7.63 (s, 2H), 6.60 (s, 1H), 3.86 (s, 3H). Step 2: Preparation of 4-bromo-5-methoxybenzene-1,2-diamine. [01336] To a solution of 4-bromo-5-methoxy-2-nitroaniline (40 g, 161.94 mmol) in EtOH (800 mL) were added Fe (90.6 g, 1619.40 mmol), NH4Cl (65.58 g, 1214.54 mmol) and H2O (160 mL), the reaction was stirred at 90°C for 4 h. The precipitate was concentration in vacuo and triturated with PE: EA (250 mL, 4:1), then filtered and concentracted in vacuo to give title product (21 g, 59 %) as a brown solid. ESI-MS (M+H) +:217.0.1H NMR (400 MHz, DMSO-d6) δ 6.66 (s, 1H), 6.34 (s, 1H), 4.68 (s, 2H), 4.25 (s, 2H), 3.63 (s, 3H). Step 3: Preparation of 5-bromo-6-methoxy-2H-benzo[d][1,2,3]triazole. [01337] To a solution of 4-bromo-5-methoxybenzene-1,2-diamine (21 g, 96.76 mmol) in H2O (84 mL) and AcOH (21 mL) was added NaNO2 (33.4 g, 483.87 mmol). The mixture was stirred at r.t for 1 h. The reaction mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The precipitate was triturated with EA: PE (150 mL, 2:1), then filtered and concentracted in vacuo to give title product (20 g, 90 %) as a brown solid. ESI-MS (M+H) +:228.0.1H NMR (400 MHz, DMSO-d6) δ 8.28 (s, 1H), 7.40 (s, 1H), 3.95 (s, 3H). Step 4: Preparation of 5-bromo-6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazole. [01338] To a solution of 5-bromo-6-methoxy-2H-benzo[d][1,2,3]triazole (20 g, 87.72 mmol) in toluene (200 mL) were added DMF-DMA (16 g, 131.58 mmol). The mixture was stirred at 100°C for 2 h. The reaction mixture was diluted with water (400 mL) and extracted with EA (400 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=5:1) to give title product (7 g, yield: 32 %) as a white solid.1H NMR (400 MHz, DMSO-d6) δ 8.26 (s, 1H), 7.41 (s, 1H), 4.44 (s, 3H), 3.93 (s, 3H). Step 5: Preparation of N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01339] To a solution of 5-bromo-6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazole (7 g, 28.93 mmol) in 1,4-dioxane (200 mL) were added diphenylmethanimine (8 g, 43.39 mmol), Cs2CO3 (29 g, 86.79 mmol), Xantphos (3.4 g, 5.79 mmol), Pd2(dba)3 (2.75 g, 2.89 mmol). The mixture was stirred at 110 ℃ for 5 h. The reaction mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (4 g, yield: 40 %) as a white solid. ESI-MS (M+H) +:343.1.1H NMR (400 MHz, CDCl3) δ 7.82 – 7.76 (m, 2H), 7.55 – 7.47 (m, 1H), 7.42 (t, J = 7.4 Hz, 2H), 7.22 – 7.18 (m, 3H), 7.17 – 7.12 (m, 2H), 6.96 (s, 1H), 6.88 (s, 1H), 4.35 (s, 3H), 3.80 (s, 3H). Step 6: Preparation of 6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine. [01340] To a solution of N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (3.5 g, 10.23 mmol) in MeOH (70 mL) were added NaOAc (2.5 g, 30.69 mmol), NH2OH.HCl (3.5 g, 51.17 mmol). The mixture was stirred at r.t for 3 h. The reaction mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=3:1) to give title product (1.7 g, yield: 92 %) as a white solid. ESI-MS (M+H) +: 179.1.1H NMR (400 MHz, DMSO-d6) δ 7.05 (s, 1H), 6.74 (s, 1H), 5.16 (s, 2H), 4.26 (s, 3H), 3.86 (s, 3H). Step 7: tert-butyl tert-butyl 7-(1-((6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01341] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.45 mmol) in THF (20 mL) were added 6- methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine (97 mg, 0.54 mmol), TEA (455 mg, 4.50 mmol), triphosgene (160 mg,0.54 mmol) (in THF (0.5 mL) ) at 0℃. The reaction mixture was stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (EA: PE=3:1) to give title product (100 mg, yield: 41 %) as a white solid. ESI-MS (M+H) +: 535.4.1H NMR (400 MHz, DMSO-d6) δ 12.38 (s, 1H), 8.66 – 8.54 (m, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.30 (s, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.37 (s, 3H), 4.04 – 3.96 (m, 5H), 3.59 – 3.53 (m, 2H), 3.31 – 3.27 (m, 2H), 3.14 – 3.07 (m, 4H), 1.42 (s, 9H), 0.95 (t, J = 6.1 Hz, 2H), 0.86 (t, J = 6.1 Hz, 2H). Step 8: Preparation of N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01342] To a solution of tert-butyl 7-(1-((6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (80 mg, 0.15 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title product (61.65 mg, 87%) as a white solid. ESI-MS (M+H) +:435.2.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 9.75 (s, 2H), 8.59 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.31 (s, 1H), 6.61 (d, J = 6.1 Hz, 1H), 4.38 (s, 3H), 4.06 – 4.01 (m, 5H), 3.62 – 3.57 (m, 2H), 3.43 (s, 2H), 3.34 – 3.29 (m, 2H), 3.16 – 3.10 (m, 2H), 1.13 – 1.09 (m, 2H), 0.95 – 0.91 (m, 2H). Example 460 – Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methoxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate.
Figure imgf000674_0001
Step 1: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (methoxymethyl)piperazine-1-carboxylate. [01343] A mixture of 4-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (511 mg, 3.32 mol), tert-butyl (R)-2-(methoxymethyl)piperazine-1-carboxylate (840 mg, 3.65 mmol) in DIEA (0.5 mL) was stirred at 140 oC for 16 h. The crude was purified by silica gel column chromatography (MeOH: DCM= 6.8 %) to give title product (500 mg, 43.27%) as a yellow solid. ESI-MS (M+H) +: 349.5. Step 2: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(methoxymethyl)piperazine-1- carboxylate. [01344] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (methoxymethyl)piperazine-1-carboxylate (150 mg, 0.43 mol), 7-fluoro-2- methylimidazo[1,2-a]pyridin-6-amine (85 mg, 0.52 mmol), triphosgene (153 mg,0.52 mmol) and TEA (522 mg, 5.17 mmol) in THF (15 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (50 mg, 21.57 %) as a yellow solid. ESI- MS (M+H) +: 540.4. Step 3: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (methoxymethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01345] A mixture of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(methoxymethyl)piperazine-1- carboxylate (40 mg, 0.07 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (27.3 mg, yield: 80 %) as a white solid. ESI-MS (M+H) +: 440.2.1H NMR (400 MHz, DMSO-d6) δ 12.00 (d, J = 1.9 Hz, 1H), 9.19 (d, J = 7.4 Hz, 1H), 8.30 (s, 2H), 7.87 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.41 (d, J = 11.6 Hz, 1H), 6.50 (d, J = 6.2 Hz, 1H), 3.99 (t, J = 8.5 Hz, 2H), 3.65 – 3.56 (m, 2H), 3.34 – 3.29 (m, 2H), 3.28 (s, 3H), 3.12 (t, J = 8.5 Hz, 2H), 2.98 – 2.85 (m, 3H), 2.79 – 2.71 (m, 1H), 2.68 – 2.61 (m, 1H), 2.28 (s, 3H).
Example 461 – Preparation of N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate.
Figure imgf000676_0001
step 4
Figure imgf000676_0002
Step 1: Preparation of 6-chloro-2-methyl-2H-pyrazolo[3,4-b]pyridine. [01346] To a mixture of 6-chloro-2H-pyrazolo[3,4-b]pyridine (20.0 g, 129.87 mmol) in EA (200 mL) was added trimethyloxonium tetrafluoroborate (23.1 g, 155.84 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with Saturated sodium bicarbonate aqueous solution (200 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo to get title product (18.0 g, Y: 82.5%) as a brown solid. ESI-MS (M+H)+: 168.5.1H NMR (400 MHz, DMSO-d6) δ 8.53 (s, 1H), 8.30 (d, J = 8.6 Hz, 1H), 7.15 (d, J = 8.6 Hz, 1H), 4.25 (s, 3H). Step 2: Preparation of 6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine. [01347] To a mixture of 6-chloro-2-methyl-2H-pyrazolo[3,4-b]pyridine (18 g, 107.14 mmol) in EtOH (200 mL) was added EtONa (8.7 g, 128.57 mmol). The mixture was stirred at 70oC for 16 h. The mixture was concentrated in vacuo and diluted with water (200 mL) and extracted with EA (200 mL*3), the organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo to get title product (10.5 g, Y: 55.4%) as a brown solid. ESI-MS (M+H)+: 178.1.1H NMR (400 MHz, DMSO-d6) δ 8.22 (s, 1H), 8.01 (d, J = 8.8 Hz, 1H), 6.55 (d, J = 8.8 Hz, 1H), 4.36 (q, J = 7.1 Hz, 2H), 4.08 (s, 3H), 1.35 (t, J = 7.1 Hz, 3H). Step 3: Preparation of 5-bromo-6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine. [01348] To a mixture of 6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine (13.4 g, 82.21 mmol) in ACN (200 mL) was added NBS (17.6 g, 98.65 mmol). The mixture was stirred at 55oC for 16 h. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3). The combined organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=10:1) to give the title compound (14.0 g, Y: 70.4 %) as a yellow solid. ESI-MS (M+H) +:256.1. Step 4: Preparation of N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-1,1- diphenylmethanimine. [01349] To a mixture of 5-bromo-6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridine (9.0 g, 50.85 mmol) in 1,4-dioxane (100 mL) were added diphenylmethanimine (13.8 g, 76.27 mmol), BINAP (6.3 g, 10.17 mmol), Pd2(dba)3 (4.7 g, 5.08 mmol) and Cs2CO3 (33.2 g, 101.69 mmol). The mixture was stirred at 110oC for 16 h under N2. The mixture was diluted with water (100 mL) and extracted with EA (100 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 2: 1) to get title product (9.0 g, Y: 71.9%) as a yellow solid. ESI-MS (M+H)+:357.5.1H NMR (400 MHz, DMSO-d6) δ 7.98 (s, 1H), 7.69 – 7.66 (m, 2H), 7.58 – 7.52 (m, 2H), 7.50 – 7.46 (m, 2H), 7.31 – 7.28 (m, 2H), 7.17 – 7.11 (m, 3H), 4.26 (q, J = 7.0 Hz, 2H), 3.98 (s, 3H), 1.26 (t, J = 7.0 Hz, 3H). Step 5: Preparation of 6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine hydrochloride. [01350] To a mixture of N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-1,1- diphenylmethanimine (9 g, 25.28 mmol) in EA (90 mL) was added 4 M HCl/EA (90 mL). The mixture was stirred at r.t for 2 h. The mixture was filtered and the residue was diluted with EA (100 mL). The mixture was stirred at r.t for 2 h and filtered to get title product (3.7 g, Y: 63.9%) as a yellow solid. ESI-MS (M+H)+:193.5. Step 6: Preparation of tert-butyl 7-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01351] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.45 mmol), 6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-amine hydrochloride (105 mg, 0.55 mmol) , TEA (138 mg, 1.36 mmol) in THF (10 mL) was added triphosgene (162 mg, 0.55 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered, triturated with MeOH (5 mL), filtered and concentrated in vacuo to get title product (40 mg, Y: 16.2 %) as a brown solid. ESI-MS (M+H) +:549.4.1H NMR (400 MHz, DMSO- d6) δ 12.16 (s, 1H), 8.68 (s, 1H), 8.13 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.46 – 4.42 (m, 2H), 4.21 – 4.14 (m, 2H), 4.04 (s, 3H), 4.02 – 3.98 (m, 2H), 3.81 – 3.75 (m, 2H), 3.64 – 3.61 (m, 1H), 3.58 – 3.55 (m, 1H), 2.95 – 2.87 (m, 2H), 1.51 – 1.48 (m, 3H), 1.42 (s, 9H), 1.21 – 1.18 (m, 4H). Step 7: N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(4,7-diazaspiro[2.5]octan- 7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01352] To a solution of tert-butyl 7-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (30 mg, 0.06 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (9.79 mg, 36.2 %) as a yellow solid. ESI-MS (M+H)+:449.3. 1H NMR (400 MHz, MeOD-d4) δ 8.69 (s, 1H), 8.28 – 8.18 (m, 2H), 7.99 – 7.96 (m, 2H), 6.54 (d, J = 6.0 Hz, 1H), 4.52 (q, J = 7.1 Hz, 2H), 4.10 – 4.06 (m, 5H), 3.52 – 3.48 (m, 2H), 3.39 – 3.35 (m, 2H), 3.32 (s, 2H), 3.10 (t, J = 8.5 Hz, 2H), 1.57 (t, J = 7.1 Hz, 3H), 1.02 (t, J = 6.4 Hz, 2H), 0.96 (t, J = 6.5 Hz, 2H).
Example 462 – Preparation of (S)-N-(3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000679_0002
Figure imgf000679_0001
Step 1: Preparation of N2-methyl-3-nitropyridine-2,4-diamine. [01353] To a solution of 2-chloro-3-nitropyridin-4-amine (1.0 g, 5.76 mmol) was added methanamine (10.0 mL,2M in ethanol) at 0 °C. The mixture was stirred at 30 °C for 16 hours. The mixture was concentrated in vacuo. The residue was triturated with tert-butyl methyl ether (5.0 mL) and filtered. The solid dried in vacuo to give title product (740 mg, yield: 72 %) as a yellow solid. ESI-MS (M+H)+: 169.2. Step 2: Preparation of tert-butyl (2-(methylamino)-3-nitropyridin-4-yl)carbamate. [01354] To a solution of N2-methyl-3-nitropyridine-2,4-diamine (740 mg, 4.40 mmol) in DCM (8.0 mL) were added TEA (1.3 g, 13.20 mmol) and DMAP (53.7 mg, 0.44 mmol), di-tert-butyl dicarbonate (1.9 g, 8.80 mmol), the mixture was stirred at rt for 16 h. The mixture was concentrated in vacuo,the crude was purified by silica gel column chromatography (PE:EA=10:1) to give title product (500 mg, yield: 42 %) as a yellow solid. ESI-MS (M+H)+: 269.2. Step 3: Preparation of tert-butyl (3-amino-2-(methylamino)pyridin-4-yl)carbamate. [01355] To a solution of tert-butyl (2-(methylamino)-3-nitropyridin-4-yl)carbamate (500 mg, 1.86 mmol) in MeOH (5.0 mL) was added 10% palladium on carbon (50 mg, 10% w/w).The mixture was stirred at rt for 16 h under hydrogen atmosphere. The mixure was filtrated through a pad of Celite and the filtrate was concentrated in vacuo to give title compound (400 mg, yield: 90 %) as a brown solid. ESI-MS (M+H)+: 239.2. Step 4: Preparation of tert-butyl (3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)carbamate. [01356] To a solution of tert-butyl (3-amino-2-(methylamino)pyridin-4-yl)carbamate (400 mg, 1.67 mmol) in trimethoxymethan (3.0 mL) was added HCOOH (115.9 mg, 2.51 mmol), the mixture was stirred at 100 °C for 1 h. The mixture was concentrated in vacuo,the crude was purified by silica gel column chromatography (PE:EA=1:1) to give title product (180 mg, yield: 43 %) as a yellow solid. ESI-MS (M+H)+: 249.1. Step 5: Preparation of 3-methyl-3H-imidazo[4,5-b]pyridin-7-amine. [01357] To a solution of tert-butyl (3-methyl-3H-imidazo[4,5-b]pyridin-7- yl)carbamate (180 mg, 0.72 mmol) in DCM (3.0 mL) was added TFA(1.0 mL) ,the mixture was stirred at rt for 2 h. The mixture was concentrated in vacuo, the residue diluted with Na2CO3 solution (10.0 mL) ,extracted with EA (10 mL×3). The combined organic layers was washed with brine (15 mL), dried over Na2SO4, filtered and concentrated in vacuo to give title product (50 mg, yield: 46 %) as a yellow solid. ESI-MS (M+H)+: 149.2. Step 6: Preparation of tert-butyl (S)-2-methyl-4-(1-((3-methyl-3H-imidazo[4,5-b]pyridin-7- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01358] To a solution of 3-methyl-3H-imidazo[4,5-b]pyridin-7-amine (50 mg, 0.33 mmol) in THF (8.0 mL) was added triphosgene (150.2 mg, 0.50 mmol) and TEA (2.0 mL) at 0°C , the mixture was stirred at 0°C for 0.5 h. Then the mixture was added tert-butyl (S)-4- (2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (107.4 mg, 0.33 mmol), the mixture was stirred at rt for 16 h. The mixture was concentrated in vacuo,the crude was purified by silica gel column chromatography (DCM:MeOH=20:1) to give title product (25 mg, yield: 15 %) as a yellow solid. ESI-MS (M+H)+: 493.3. Step 7: Preparation of (S)-N-(3-methyl-3H-imidazo[4,5-b]pyridin-7-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01359] To a solution of tert-butyl (S)-2-methyl-4-(1-((3-methyl-3H-imidazo[4,5- b]pyridin-7-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (25 mg, 0.05 mmol) in DCM (1.0 mL) was added TFA (0.2 mL), the mixture was stirred at rt for 2 h. The mixture was concentrated in vacuo,the crude was purified by Prep- HPLC (0.1% FA in H2O/MeCN) to give title product (5.91 mg, yield: 29 %) as a yellow solid. ESI-MS (M+H)+: 393.3.1H NMR (400 MHz, MeOD-d4) δ 8.49 (s, 1H), 8.31 (d, J = 5.6 Hz, 1H), 8.09 (d, J = 5.6,2H), 8.07 (d, J =6.0,2H), 6.65 (d, J = 6.0 Hz, 1H), 4.17 (t, J = 8.4 Hz, 2H), 3.97 (s, 3H), 3.88 – 3.82 (m, 2H), 3.52 – 4.86 (m, 2H), 3.19 – 3.06 (m, 2H), 3.22 (t, J = 8.4 Hz, 2H), 3.13 – 3.02 (m, 1H), 1.41 (d, J = 6.4 Hz, 3H). Example 463 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- 2H-benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000681_0001
Step 1: Preparation of tert-butyl 4-(1-((6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01360] To a solution of 6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine (100 mg, 0.56 mmol) in THF (12 mL) were added TEA (3.3 mL, 23.74 mmol) and triphosgene (166.5 mg, 0.56 mmol) at 0°C , the mixture was stirred at 0°C for 0.5 h. Then the mixture was added tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine- 1-carboxylate (124.3 mg, 0.37 mmol), the mixture was stirred at rt for 16 h. The mixture was concentrated vacuo, the crude was purified by silica gel column chromatography (DCM:MeOH=20:1) to give title product (115 mg, yield:38 %) as a yellow solid. ESI-MS (M+H)+: 537.3. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01361] To a solution of tert-butyl 4-(1-((6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (115 mg, 0.21 mmol) in DCM (2.0 mL) was added TFA(1.0 ml),the mixture was stirred at rt for 2 h. The mixture was concentrated in vacuo, the crude purified by Prep-HPLC (0.1% FA in H2O/MeCN) to give title product (61.19 mg, yield: 65 %) as a white solid. ESI-MS (M+H)+: 437.3.1H NMR (400 MHz, DMSO-d6) δ 12.32 (s, 1H), 8.92 (s, 2H), 8.61 (s, 1H), 8.03 (d, J = 6.0 Hz, 1H), 7.31 (s, 1H), 6.62 (d, J = 6.0 Hz, 1H), 4.38 (s, 3H), 4.08 – 4.00 (m, 5H), 3.39-3.3 (m, 4H), 3.19-3.15 (m,2H), 1.38 (s,6H). Example 464 – Preparation of (S)-N-(2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000682_0001
Step 1: Preparation of 2-methyl-5-nitro-2H-benzo[d][1,2,3]triazole. [01362] To a solution of 5-nitro-2H-benzo[d][1,2,3]triazole (14 g, 85.37 mmol) in EtOH (100 mL) were added EtONa-EtOH (20% wt) (52 mL, 153.67 mmol) and MeI (24 g, 170.73 mmol). The mixture was stirred at 80˚C for 16 h. T The reaction mixture was diluted with water (100 mL) and extracted with EA (100 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=5:1) to give title product (2 g, yield: 13 %) as a white solid.1H NMR (400 MHz, DMSO-d6) δ 8.97 (dd, J = 1.9, 0.7 Hz, 1H), 8.23 – 8.16 (m, 2H), 4.62 (s, 3H). Step 2: Preparation of 2-methyl-2H-benzo[d][1,2,3]triazol-5-amine. [01363] To a solution of 2-methyl-5-nitro-2H-benzo[d][1,2,3]triazole (200 mg, 1.12 mmol) in THF (10 mL) was added Pd/C (20 mg, 10% wt). The mixture was stirred at r.t for 2 h under H2. The precipitate was filtered, washed with THF (50 mL) and the filtrate was concentrated to afford title product (150 mg, Y: 89 %) as a yellow solid. ESI-MS (M+H) +: 149.1. Step 3: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01364] To a solution of 2-methyl-2H-benzo[d][1,2,3]triazol-5-amine (84 mg, 0.57 mmol) in THF (20 mL) were added and TEA (476 mg, 4.70 mmol) and triphosgene (167 mg, 0.57 mmol) and stirred at 0oC for 5 min. Then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added slowly at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (90 mg, 39 %) as a white solid. ESI-MS (M+H) +: 493.7.1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 8.26 (d, J = 1.3 Hz, 1H), 7.96 (d, J = 6.1 Hz, 1H), 7.85 (d, J = 9.0 Hz, 1H), 7.37 (dd, J = 9.1, 1.9 Hz, 1H), 6.58 – 6.48 (m, 1H), 4.44 (s, 3H), 4.21 – 4.14 (m, 1H), 4.04 – 3.97 (m, 2H), 3.82 – 3.76 (m, 1H), 3.70 – 3.57 (m, 2H), 3.22 – 3.06 (m, 4H), 3.00 – 2.91 (m, 1H), 1.43 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 4: Preparation of (S)-N-(2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01365] To a mixture of tert-butyl (S)-2-methyl-4-(1-((2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (70 mg, 0.14 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title product (48.17 mg, 80%) as a white solid. ESI-MS (M+H) +:393.2.1H NMR (400 MHz, DMSO-d6) δ 9.85 (s, 2H), 8.22 (s, 1H), 7.89 (d, J = 9.1 Hz, 2H), 7.59 (s, 1H), 6.94 – 6.76 (m, 1H), 4.46 (s, 3H), 4.34 – 4.20 (m, 2H), 4.08 – 3.96 (m, 2H), 3.41 – 3.24 (m, 6H), 3.14 – 3.07 (m, 1H), 1.33 (d, J = 6.0 Hz, 3H). Example 465 – Preparation of (S)-N-(2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000684_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01366] To a solution of 2,7-dimethyl-2H-pyrazolo[3,4-c]pyridine-5-carboxylic acid (90 mg, 0.47 mmol) in Toluene (10 mL) were added TEA (142.92 mg, 1.42 mmol) and DPPA (193.88 mg, 0.71 mmol). The mixture was stirred at rt for 1h. Then the mixture was stirred at 60 oC for another 1h. tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added to the mixture and stirred at 90 oC for 16h. The mixture was allowed to cool down to room temperature and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:3) to provide title product (50 mg, 21.02%) as a white solid. ESI-MS (M+H)+: 507.4. Step 2: Preparation of (S)-N-(2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01367] A mixture of tert-butyl (S)-4-(1-((2,7-dimethyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.099 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (2.51 mg, 5.36%) as a white solid. ESI-MS (M+H) +:407.2. 1H NMR (400 MHz, MeOD-d4) δ 8.35 (s, 1H), 8.03 (d, J = 5.8 Hz, 2H), 6.69 (d, J = 6.3 Hz, 1H), 4.32 (s, 3H), 4.21 – 4.14 (m, 2H), 3.94 – 3.86 (m, 2H), 3.57 – 3.35 (m, 4H), 3.28 – 3.24 (m, 2H), 3.12 – 3.04 (m, 1H), 2.92 (s, 3H), 1.41 (d, J = 6.6 Hz, 3H). Example 466 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-((3R,5S)- 3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000685_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01368] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 2,8-dimethylimidazo[1,2- a]pyrazin-6-amine (58 mg, 0.36 mmol) and TEA (457 mg, 4.50 mmol) in THF (8 mL) was added triphosgene (135 mg, 0.45 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 8) to give title product (100 mg, Y: 63.7%) as a pink solid. ESI-MS (M+H) +: 521.3.1H NMR (400 MHz, DMSO-d6)δ 11.86 (s, 1H), 8.91 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 7.92 (s, 1H), 6.58 (d, J = 6.2 Hz, 1H), 4.16 – 4.08 (m, 2H), 4.02 (t, J = 8.6 Hz, 2H), 3.59 (d, J = 12.4 Hz, 2H), 3.18 (t, J = 8.5 Hz, 2H), 2.99 (dd, J = 12.5, 4.1 Hz, 2H), 2.68 (s, 3H), 2.36 (s, 3H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyrazin-6-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01369] A mixture of tert-butyl (2R,6S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (90 mg, 0.17 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo to give title product (50 mg, Y: 68.8 %) as a white solid. ESI-MS (M+H) +: 421.2.1H NMR (400 MHz, MeOD-d4) δ 9.27 (s, 1H), 8.17 (s, 1H), 7.90 (d, J = 6.9 Hz, 1H), 6.97 (s, 1H), 4.47 – 4.14 (m, 4H), 3.64 – 3.44 (m, 4H), 3.24 (s, 2H), 2.88 (s, 3H), 2.63 (s, 3H), 1.43 (d, J = 6.5 Hz, 6H). Example 467 – Preparation of (S)-N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000686_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01370] To a solution of 6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine (101 mg, 0.565 mmol) in THF (5 mL) were added TEA (3 mL) and triphosgene (168 mg, 0.565 mmol) at 0°C. The mixture was stirred at 0°C for 1.0 h.Then tert-butyl (S)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (120 mg, 0.376 mmol) in THF (2 mL) was added, the mixture was stirred at rt for 17 h. The mixture was concentrated in vacuo and the crude was triturated with MeOH (3.0 ml) to give title compound (160 mg, yield: 81 %) as a yellow solid. ESI-MS (M+H)+: 523.3. Step 2: Preparation of (S)-N-(6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01371] To a solution of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (160 mg, 0.306 mmol) in CH2Cl2 (2.5 mL) was added TFA (1 mL). The mixture was stirred at rt for 2 h. The mixture concentrated in vacuo, the crude was purified by Prep-HPLC (0.1% TFA in H2O/MeCN) to give title product (133.45 mg, yield:78 %) as a white solid. ESI-MS (M+H)+: 423.2.1H NMR (400 MHz, DMSO-d6) δ 12.31 (s, 1H), 9.25 (s, 1H), 8.88 (s, 1H), 8.61 (s, 1H), 8.01 (s, 1H), 7.30 (s, 1H), 6.62 (d, J = 3.2 Hz, 1H), 4.38 (s, 3H), 4.04 – 4.01 (m, 5H), 3.78 (d, J = 12.0 Hz, 2H), 3.38 (d, J = 12.0 Hz, 2H), 3.18 – 3.14 (m, 4H), 3.02 – 2.96 (m, 1H), 1.27 (d, J = 4.0 Hz, 3H). Example 468 – Preparation of (S)-N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000687_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01372] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-amine (86 mg, 0.38 mmol), TEA (476 mg, 4.72 mmol) in THF (10 mL) was added and triphosgene (112 mg, 0.38 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (10 mL), the precipitate was filtered and triturated with MeOH (5mL) to get title product (50 mg, Y: 23.7 %) as a brown solid. ESI- MS (M+H) +:537.4. Step 2: Preparation of (S)-N-(6-ethoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01373] To a solution of tert-butyl (S)-4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (6.66 mg, 16.2 %) as a white solid. ESI-MS (M+H)+:437.3.1H NMR (400 MHz, MeOD-d4) δ 8.71 – 8.65 (m, 1H), 8.02 – 7.96 (m, 2H), 6.64 – 6.59 (m, 1H), 4.55 – 4.48 (m, 2H), 4.14 – 4.08 (m, 5H), 3.85 – 3.77 (m, 2H), 3.49 (d, J = 10.3 Hz, 2H), 3.22 – 3.11 (m, 4H), 3.00 (t, J = 11.8 Hz, 1H), 1.59 – 1.54 (m, 3H), 1.41 – 1.38 (m, 3H). Example 469 – Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- (2-hydroxypropan-2-yl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000688_0001
Step 1: Preparation of 1-(tert-butyl) 2-methyl (R)-4-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1,2-dicarboxylate. [01374] A mixture of 1-(tert-butyl) 2-methyl (R)-piperazine-1,2-dicarboxylate (1.5 g, 6.148 mmol), 1-(4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl)ethan-1-one (1.48 g, 6.148 mmol), Cs2CO3 (6 g, 18.443 mmol) and Binap (765 mg, 1.23 mmol ),Pd2(dba)3(563 mg, 0.615 mmol) in 1,4-dioxane (20 mL) was stirred at 100 °C for 16 h. The reaction was concentrated in vacuo and the crude was purified by silica gel column chromatography (EA: PE=5:1) to give the title compound (1.4 g, 56.5 %) as a yellow solid. ESI-MS (M+H)+: 405.1. 1H NMR (400 MHz, DMSO-d6) δ 7.94 (d, J = 5.8 Hz, 1H), 6.55 (d, J = 5.9 Hz, 1H), 4.71 (d, J = 25.1 Hz, 1H), 4.05 – 3.79 (m, 4H), 3.68 (d, J = 5.9 Hz, 3H), 3.54 – 3.41 (m, 1H), 3.28 – 2.85 (m, 5H), 2.51 (s, 3H), 1.41 (d, J = 22.1 Hz, 9H). Step 2: Preparation of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(2- hydroxypropan-2-yl)piperazine-1-carboxylate . [01375] A mixture of 1-(tert-butyl) 2-methyl (R)-4-(1-acetyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1,2-dicarboxylate (2 g, 4.95 mmol) in THF(30 mL) was added MeLi (20 mL,49.5 mmol,2.5 M). The reaction mixture was stirred at -78 oC for 2 h. The reaction mixture was concentrated and the solid was purified by prep-HPLC (0.05% FA in H2O / MeCN) to give the title compound (60 mg, 3.35 %) as yellow solid. ESI-MS (M+H+): 363.3.1H NMR (400 MHz, CDCl3) δ 7.78 (s, 1H), 6.20 (s, 1H), 4.65 – 4.43 (m, 1H), 4.15 – 4.03 (m, 1H), 3.80 – 3.72 (m, 1H), 3.60 (t, J = 8.3 Hz, 3H), 3.36 – 3.25 (m, 1H), 3.17 – 2.99 (m, 3H), 2.92 – 2.80 (m, 1H), 1.48 (s, 9H), 1.34 (s, 3H), 1.25 (s, 3H). Step 3: Preparation of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(2-hydroxypropan-2- yl)piperazine-1-carboxylate. [01376] To a solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (33 mg, 0.20 mmol) and TEA (201mg, 1.99 mmol) in THF (12 mL) was added triphosgene (59 mg, 0.20 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- (2-hydroxypropan-2-yl)piperazine-1-carboxylate (60 mg, 0.17 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (5 mL) to give the compound (60 mg, 64 %) as a grey solid. ESI-MS (M+H) +:553.9.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 9.19 (d, J = 7.4 Hz, 1H), 7.84 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.41 (d, J = 11.6 Hz, 1H), 6.47 (s, 1H), 4.62 (s, 1H), 4.08 – 3.90 (m, 4H), 3.76 (s, 1H), 3.57 – 3.44 (m, 2H), 3.32 – 3.25 (m, 2H), 3.21 – 3.13 (m, 2H), 2.28 (s, 3H), 1.38 (s, 9H), 1.15 (s, 6H). Step 4: Preparation of (R)-N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3-(2- hydroxypropan-2-yl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01377] To a solution of tert-butyl (R)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-(2-hydroxypropan-2- yl)piperazine-1-carboxylate (50 mg, 0.09 mmol) in EA (1 mL) was added 4M HCl/EtOAc (3 mL) at 0 oC. Then the mixture was stirred at r.t for 2 hours. The precipitate was filtered, and washed with EA (3 mL) and lyophilized to give title compound (33.65 mg, yield: 76%) as a white solid. ESI-MS (M+H)+:454.2.1H NMR (400 MHz, DMSO-d6) δ 12.41 (s, 1H), 9.67 (s, 1H), 9.22 (s, 1H), 9.04 (s, 1H), 8.17 (s, 1H), 8.07 (d, J = 9.9 Hz, 1H), 7.98 (d, J = 6.1 Hz, 1H), 6.68 (d, J = 6.0 Hz, 1H), 4.08 – 4.06 (m, 2H), 3.92 – 3.84 (m, 2H), 3.34 – 3.27 (m, 2H), 3.25 – 3.16 (m, 3H), 3.14 – 3.04 (m, 2H), 2.46 (s, 3H), 1.30 (d, J = 14.3 Hz, 6H). [01378] Example 470 – Preparation of N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)- 4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000690_0001
Step 1: Preparation of 5-bromo-4-ethoxypyridin-2-amine. [01379] To a mixture of 4-ethoxypyridin-2-amine (48 g, 347.83 mmol) in ACN (500 mL) was added 1-bromopyrrolidine-2,5-dione (61.91 g, 347.83 mmol). The mixture was stirred at rt for 16 h. The reaction mixture was diluted with water (500 mL) and washed with EA (500 mL x 2). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (30 g, yield: 39.87 %) as a white solid. ESI-MS (M+H) +:219.0.1H NMR (400 MHz, DMSO-d6) δ 7.83 (s, 1H), 6.09 (s, 1H), 6.02 (s, 2H), 4.04 (q, J = 7.0 Hz, 2H), 1.35 (t, J = 7.0 Hz, 3H). Step 2: Preparation of 1,2-diamino-5-bromo-4-ethoxypyridin-1-ium 2,4,6- trimethylbenzenesulfonate. [01380] To a solution of 5-bromo-4-ethoxypyridin-2-amine (10 g, 46.30 mmol) in CHCl3 (100 mL) was added and O-(mesitylsulfonyl)hydroxylamine (10.95 g, 50.93 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The precipitate was filtered and dried in vacuo to give crude title product (8 g, 74.47%) as a white solid. ESI-MS (M+H) +: 234.0. Step 3: Preparation of 6-bromo-7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine. [01381] To a mixture of 1,2-diamino-5-bromo-4-ethoxypyridin-1-ium 2,4,6- trimethylbenzenesulfonate (8 g, 34.49 mmol) in Ac2O (80 mL) was added O- (mesitylsulfonyl)hydroxylamine (1.19 g, 6.90 mmol). The mixture was stirred at 100 oC for 16 h. The mixture was concentrated in vacuo and diluted with H2O (20 mL) and the precipitate was filtered and dried in vacuo to give crude title product (5 g, Y: 56.86%) as a white solid. ESI-MS (M+H)+: 259.0. Step 4: Preparation of N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine. [01382] To a mixture of 6-bromo-7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridine (4.8 g, 18.82 mmol), diphenylmethanimine (5.11 g, 28.24 mmol) and BINAP (2.34 g, 3.76 mmol) in 1,4-dioxane (50 mL) were added Cs2CO3 (12.27 g, 37.64 mmol) and Pd(OAc)2 (424.88 mg, 1.88 mmol). The mixture was stirred at 110 oC for 16 h under N2. The mixture was diluted with H2O (50 mL) and extracted with EA (50 mL x 3). The organic phase was washed with brine (50 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (1 g, 15.61%) as a brown solid. ESI-MS (M+H) +:357.4. Step 5: Preparation of 7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride. [01383] A mixture of N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-1,1- diphenylmethanimine (1 g, 2.81 mmol) in 4M HCl/EA (10 mL) was stirred at rt for 2 h. The mixture was filtrated and filtrate cake was dried in vacuo to give title product (400 mg, 82.34%) as a brown solid. ESI-MS (M+H) +: 193.5. Step 6: Preparation of tert-butyl 7-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01384] To a mixture of 7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride (120 mg, 0.53 mmol), tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (173.68 mg, 0.53 mmol) and TEA (160.59 mg, 1.59 mmol) in THF (5 mL) was added triphosgene (313.76 mg, 1.06 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (60 mg, 17.22%) as a brown solid. ESI-MS (M+H) +: 549.3. Step 7: Preparation of N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01385] A mixture of tert-butyl 7-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (60 mg, 0.11 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (2.51 mg, 5.36%) as a white solid. ESI-MS (M+H) +:449.2.1H NMR (400 MHz, MeOD-d4) δ 9.36 (s, 1H), 7.80 (d, J = 5.9 Hz, 1H), 6.89 (s, 1H), 6.45 (d, J = 6.0 Hz, 1H), 4.25 – 4.19 (m, 2H), 4.04 – 3.98 (m, 2H), 3.44 – 3.39 (m, 2H), 3.26 – 3.20 (m, 4H), 3.09 – 3.03 (m, 2H), 2.41 (s, 3H), 1.61 (t, J = 6.8 Hz, 3H), 0.91 – 0.82 (m, 4H).
Example 471 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methyl-2H-benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride
Figure imgf000693_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01386] A mixture of 6-methoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine (129 mg, 0.723 mmol), triphosgene (215 mg, 0.723 mmol) and TEA (730 mg, 7 mmol) in THF (5 mL) was stirred at 0 oC for 20 min. Then tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (200 mg, 0.602 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The solid was triturated with MeOH (5 mL*2) to afford title product (80 mg, 24.8 %) as a white solid. ESI- MS (M+H) +: 537.0.1 H NMR (400 MHz, DMSO-d6) δ 12.37 (s, 1H), 8.61 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.31 (s, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.37 (s, 3H), 4.15 – 4.08 (m, 2H), 4.07 – 4.01 (m, 5H), 3.58 (d, J = 12.4 Hz, 2H), 3.18 (t, J = 8.6 Hz, 2H), 3.01 – 2.95 (m, 2H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01387] A mixture of tert-butyl (2R,6S)-4-(1-((6-methoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 2 h. The reaction mixture was concentrated and the solid was lyophilized to give title product (43.5 mg, 61.1 %) as a white solid. ESI-MS (M+H) +: 437.2.1H NMR (400 MHz, DMSO-d6) δ 12.29 (s, 1H), 9.66 (s, 1H), 9.19 (s, 1H), 8.58 (s, 1H), 8.00 (d, J = 6.1 Hz, 1H), 7.32 (s, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.38 (s, 3H), 4.04 – 4.01 (m, 5H), 3.86 (d, J = 13.3 Hz, 2H), 3.39 – 3.30 (m, 2H), 3.20 (t, J = 8.5 Hz, 2H), 3.01 (t, J = 12.2 Hz, 2H), 1.31 (d, J = 6.5 Hz, 6H). Example 472 – Preparation of (S)-N-(8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000694_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01388] A mixture of 8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-amine hydrochloride (173 mg, 0.755 mmol), triphosgene (224 mg, 0.755 mmol) and TEA (762 mg, 7.547 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (S)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.629 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The solid was triturated with MeOH (5 mL*2) to afford title product (90 mg, 26.7 %) as a white solid. ESI-MS (M+H) +: 538.2.1H NMR (400 MHz, DMSO-d6) δ 12.08 (s, 1H), 8.83 (s, 1H), 7.94 (d, J = 6.1 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.56 (q, J = 7.1 Hz, 2H), 4.05 – 3.97 (m, 2H), 3.67 – 3.57 (m, 3H), 3.26 – 3.04 (m, 6H), 2.47 (s, 3H), 1.46 – 1.42 (m, 12H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01389] A mixture of tert-butyl (S)-4-(1-((8-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine- 1-carboxylate (80 mg, 0.149 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 2 h. The reaction mixture was concentrated and the solid was lyophilized to give title product (60 mg, 85.2 %) as a white solid. ESI-MS (M+H) +: 438.4.1H NMR (400 MHz, DMSO-d6) δ 9.52 – 9.09 (m, 2H), 8.82 (s, 1H), 7.97 (s, 1H), 6.67 (s, 1H), 4.56 (q, J = 7.0 Hz, 2H), 4.10 – 4.01 (m, 2H), 3.68 (s, 3H), 3.38 – 3.31 (m, 2H), 3.22 – 3.14 (m, 2H), 3.13 – 3.02 (m, 2H), 2.48 (s, 3H), 1.44 (t, J = 7.1 Hz, 3H), 1.30 (d, J = 6.4 Hz, 3H). Example 473 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-ethoxy-2- methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000695_0001
Compound 473 Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((8-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01390] A mixture of 8-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-amine hydrochloride (166 mg, 0.723 mmol), triphosgene (215 mg, 0.723 mmol) and TEA (730 mg, 7.229 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (2R,6S)-4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (200 mg, 0.602 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The solid was triturated with MeOH (5 mL*2) to afford title product (80 mg, 24.1 %) as a white solid. ESI-MS (M+H) +: 552.3.1 H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 8.83 (s, 1H), 7.97 (d, J = 5.8 Hz, 1H), 6.59 (d, J = 6.1 Hz, 1H), 4.56 (q, J = 7.0 Hz, 2H), 4.14 – 4.07 (m, 2H), 4.03 (t, J = 8.4 Hz, 2H), 3.60 (d, J = 12.9 Hz, 2H), 3.22 – 3.15 (m, 2H), 3.03 – 2.96 (m, 2H), 2.47 (s, 3H), 1.47 – 1.42 (m, 12H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01391] A mixture of tert-butyl (2R,6S)-4-(1-((8-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (80 mg, 0.145 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 2 h. The reaction mixture was concentrated and the solid was lyophilized to give title product (51 mg, 72.1 %) as a white solid. ESI-MS (M+H) +: 452.0.1H NMR (400 MHz, DMSO-d6) δ 9.64 (s, 1H), 9.19 (s, 1H), 8.81 (s, 1H), 7.95 (d, J = 5.7 Hz, 1H), 6.70 (s, 1H), 4.56 (q, J = 7.1 Hz, 2H), 4.10 – 4.00 (m, 2H), 3.89 (d, J = 12.3 Hz, 2H), 3.39 – 3.29 (m, 2H), 3.28 – 3.14 (m, 2H), 3.13 – 2.94 (m, 2H), 2.48 (s, 3H), 1.44 (t, J = 7.1 Hz, 3H), 1.31 (d, J = 6.4 Hz, 6H). Example 474 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000696_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((6-fluoro-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01392] To a solution of 6-fluoro-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (70 mg, 0.36 mmol) in toluene (10 mL) were added DPPA (124 mg, 0.45 mmol) and TEA (91 mg, 0.90 mmol). The mixture was stirred at r.t for 1 h and 40 min at 70 o C. Then tert- butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (100 mg, 0.30 mmol) was added to the solution and stirred at 90 o C for 16 h. The precipitate was filtered, washed with toluene (5 mL) and dried to give title product (70 mg, yield: 43 %) as a white solid. ESI-MS (M+H) +:524.3.1H NMR (400 MHz, CDCl3) δ 12.32 (s, 1H), 8.37 (d, J = 7.9 Hz, 1H), 8.31 (d, J = 5.8 Hz, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.40 (d, J = 6.0 Hz, 1H), 6.18 (s, 1H), 4.31 – 4.24 (m, 2H), 4.22 – 4.15 (m, 2H), 3.48 – 3.42 (m, 2H), 3.20 – 3.13 (m, 2H), 3.05 – 2.98 (m, 2H), 2.43 (s, 3H), 1.50 (s, 9H), 1.37 (d, J = 6.8 Hz, 6H). Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01393] To a mixture of tert-butyl (2R,6S)-4-(1-((6-fluoro-2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (50 mg, 0.095 mmol) in EA (5 mL) was added 4 M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title product (41.54 mg, 95%) as a white solid. ESI-MS (M+H) +: 424.0.1H NMR (400 MHz, DMSO-d6) δ 12.29 (s, 1H), 9.69 (s, 1H), 9.24 (s, 1H), 8.92 (d, J = 6.2 Hz, 1H), 8.21 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 6.69 (s, 1H), 6.32 (s, 1H), 4.16 – 4.08 (m, 2H), 3.91 – 3.84 (m, 2H), 3.38 – 3.30 (m, 2H), 3.25 – 3.15 (m, 2H), 3.10 – 2.99 (m, 2H), 2.34 (s, 3H), 1.31 (d, J = 6.5 Hz, 6H). Example 475 – Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- (3,3-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000697_0001
Step 1: Preparation of tert-butyl 4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01394] To a solution of 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylic acid (87 mg, 0.45 mmol) and TEA (121 mg, 1.204 mmol) in tol (5 mL) was added DPPA (232 mg, 0.84 mmol), the mixture was stirred at RT for 1 h and 90 oC for 1 h, after 2 h, tert- butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (100 mg, 0.301 mmol) was added to the mixture and stirred at 110 oC for 4 h. The mixture was diluted with water (10 mL) extracted with EA (20 mL×3). The organic layer was washed with brine (20 mL), dried with Na2SO4 and concentrated in vacuo and triturate with MeOH (5 mL) to give title product (50 mg, yield: 31.88 %) as a yellow solid. ESI-MS (M+H) +: 522.0. 1H NMR (400 MHz, CDCl3) δ 12.29 (s, 1H), 9.71 (s, 1H), 7.83 (d, J = 6.1 Hz, 1H), 6.24 (d, J = 6.2 Hz, 1H), 4.17 – 4.12 (m, 2H), 3.83 – 3.78 (m, 2H), 3.59 (t, J = 5.5 Hz, 2H), 3.48 (s, 2H), 3.31 – 3.26 (m, 2H), 2.79 (s, 3H), 2.59 (s, 3H), 1.51 (s, 9H), 1.46 (s, 6H). Step 2: Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01395] A mixture of tert-butyl 4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in 4M HCl/EA (2 mL, 4 M) was stirred at r.t for 2 h. The precipitate was filtered and dried to give title product (10.08 mg, 25.2 %) as a white solid. ESI-MS (M+H) +: 422.1.1H NMR (400 MHz, D2O) δ 9.06 (s, 1H), 7.72 (d, J = 7.4 Hz, 1H), 6.79 (d, J = 7.4 Hz, 1H), 4.34 (t, J = 8.5 Hz, 2H), 3.89 – 3.85 (m, 2H), 3.68 (s, 2H), 3.49 – 3.42 (m, 4H), 2.61 (s, 3H), 2.52 (s, 3H), 1.43 (s, 6H).
Example 476 – Preparation of (R)-N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000699_0001
Step 1: Preparation of 6,8-dibromo-2-methylimidazo[1,2-a]pyrazine. [01396] To a mixture of 3,5-dibromopyrazin-2-amine (24 g, 94.86 mmol) in IPA (240 mL) were added 1-bromo-2,2-dimethoxypropane (34.72 g, 189.72 mmol) and PPTS (2.38 g, 9.49 mmol). The reaction solution was stirred at 80℃ for 48 h. The mixture was filtered and dried in vacuo to give title product (15 g, yield: 54.2%) as a brown solid. ESI-MS (M+H) +: 291.8. Step 2: Preparation of t 6-bromo-8-methoxy-2-methylimidazo[1,2-a]pyrazine. [01397] A mixture of 6,8-dibromo-2-methylimidazo[1,2-a]pyrazine (14 g, 47.95 mmol) in MeOH (300 mL) was added NaH (2.3 g, 95.89 mmol), the mixture was stirred at r.t for 16 h. The mixture diluted with H2O (300 mL), extracted with DCM (600 mL x3), organic layer was concentrated in vacuo to give title product (14 g, crude) as a brown solid. ESI-MS (M+H) +: 243.9. Step 3: Preparation of N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-1,1- diphenylmethanimine. [01398] To a mixture of 6-bromo-8-methoxy-2-methylimidazo[1,2-a]pyrazine (6 g, 24.69 mmol) and diphenylmethanimine (4.92 g, 27.16 mmol) in 1,4-dioxane (80 mL) were added BINAP (3.08 g, 4.94 mmol), Pd2(dba)3(2.26 g, 2.47 mmol) and Cs2CO3 (24.07 g, 74.07 mmol). The reaction solution was stirred at 110℃ for 16 h under N2. The reaction was concentrated in vacuo and purified by silica gel column chromatography (PE: EA=2:3) to give title product (5.8 g, Y: 68.5%) as a yellow oil. ESI-MS (M+H) +: 343.0. Step 4: Preparation of 8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-amine HCl salt. [01399] A mixture of N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-1,1- diphenylmethanimine (5.3 g, 12.21 mmol) in EA (40 mL) and 4M HCl/EA (30 mL) was stirred at RT for 2h. The mixture was diluted with EA (250 mL), stirred at r.t for 16h. The precipitate was filtered and dried in vacuo to give title product (2.7 g, y: 97.6%) as a yellow solid. ESI-MS (M+H) +: 179.1. Step 5: Preparation of tert-butyl (R)-4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01400] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 8-methoxy-2-methylimidazo[1,2- a]pyrazin-6-amine HCl salt (84 mg, 0.47 mmol) and TEA (475 mg, 4.70 mmol) in THF (15 mL) was added triphosgene (111.7 mg, 0.38 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 8) to give title product (110 mg, Y: 67.1%) as a yellow solid. ESI-MS (M+H) +: 523.4. Step 6: Preparation of (R)-N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01401] A mixture of tert-butyl (R)-4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (90 mg, 0.17 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (36 mg, Y: 49.5 %) as a white solid. ESI-MS (M+H) +: 423.2.1H NMR (400 MHz, DMSO-d6) δ 11.83 (s, 1H), 8.65 (s, 1H), 8.22 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.87 (d, J = 0.7 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.04 (s, 3H), 4.01 – 3.95 (m, 2H), 3.62 – 3.58 (m, 3H), 3.12 (t, J = 8.6 Hz, 2H), 2.97 (d, J = 11.1 Hz, 1H), 2.88 – 2.75 (m, 3H), 2.32 (s, 3H), 1.04 (d, J = 6.3 Hz, 3H). Example 477 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000701_0001
Compound 477 Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01402] To a mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-amine (83 mg, 0.36 mmol) in THF (10 mL) were added TEA (456 mg, 4.52 mmol) and triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered and triturated with MeOH (5mL) to get title product (50 mg, Y: 30.1 %) as an off-white solid. ESI-MS (M+H) +:551.4. Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01403] To a solution of tert-butyl (2S,6R)-4-(1-((6-ethoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (40 mg, 0.07 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (7 mg, 17.7 %) as a white solid. ESI-MS (M+H)+:451.2. 1H NMR (400 MHz, MeOD-d4) δ 8.65 (s, 1H), 7.99 (s, 1H), 7.95 (d, J = 6.1 Hz, 1H), 6.62 (d, J = 6.2 Hz, 1H), 4.50 (q, J = 7.1 Hz, 2H), 4.14 – 4.09 (m, 5H), 3.88 (d, J = 13.8 Hz, 2H), 3.52 – 3.46 (m, 2H), 3.16 (t, J = 8.5 Hz, 2H), 2.94 – 2.86 (m, 2H), 1.55 (t, J = 7.1 Hz, 3H), 1.39 (d, J = 6.6 Hz, 6H). Example 478 – Preparation of N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000702_0001
Compound 478 Step 1: Preparation of tert-butyl 7-(1-((2-methylimidazo[1,2-a]pyrimidin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [01404] To a mixture of 7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine hydrochloride (66.60 mg, 0.45 mmol), tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.45 mmol) and TEA (136.35 mg, 1.35 mmol) in THF (5 mL) was added triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (60 mg, 26.46%) as a yellow solid. ESI-MS (M+H) +: 505.2. Step 2: Preparation of N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01405] A mixture of tert-butyl 7-(1-((2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (60 mg,0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% HCl in water / CH3CN) to give title product (2.61 mg, 4.94%) as a yellow solid. ESI-MS (M+H) +:405.2.1H NMR (400 MHz, MeOD-d4) δ 9.22 (s, 1H), 8.48 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.55 (s, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.11 – 4.02 (m, 2H), 3.45 – 3.39 (m, 2H), 3.27 – 3.23 (m, 2H), 3.22 – 3.16 (m, 2H), 3.15 – 3.08 (m, 2H), 2.42 (s, 3H), 0.88 – 0.77 (m, 4H). Example 479 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000703_0001
Step 1: Preparation of tert-butyl 7-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [01406] To a mixture of 2,7-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride (88.65 mg, 0.45 mmol), tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (150 mg, 0.45 mmol) and TEA (136.35 mg, 1.35 mmol) in THF (5 mL) was added triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (60 mg, 25.79%) as a yellow solid. ESI-MS (M+H) +: 518.3. Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01407] A mixture of tert-butyl 7-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (60 mg, 0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (1.44 mg, 2.59%) as a yellow solid. ESI-MS (M+H) +:418.4.1H NMR (400 MHz, MeOD-d4) δ 9.25 (s, 1H), 8.40 (s, 1H), 7.91 (d, J = 5.5 Hz, 1H), 7.64 (s, 1H), 7.44 (s, 1H), 6.52 (d, J = 5.6 Hz, 1H), 4.11 – 3.98 (m, 2H), 3.49 – 3.41 (m, 2H), 3.29 – 3.26 (m, 2H), 3.26 – 3.21 (m, 2H), 3.13 – 3.04 (m, 2H), 2.54 (s, 3H), 2.42 (s, 3H), 0.95 – 0.77 (m, 4H). Example 480 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000704_0001
Step 1: Preparation of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [01408] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (120 mg, 0.36 mmol), 2,8-dimethylimidazo[1,2-a]pyridin- 6-amine (85 mg, 0.43 mmol), triphosgene (128 mg, 0.43 mmol) and TEA (438 mg, 4.34 mmol) in THF (12 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (50 mg, crude) as a yellow solid. ESI-MS (M+H) +: 520.3. Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3,3-dimethylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01409] A mixture of tert-butyl 4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (15.5 mg, yield: 37.01 %) as a white solid. ESI-MS (M+H) +: 420.2.1H NMR (400 MHz, DMSO-d6) δ 11.70 (s, 1H), 8.82 (d, J = 1.3 Hz, 1H), 7.89 (d, J = 6.1 Hz, 1H), 7.66 (s, 1H), 6.94 (s, 1H), 6.50 (d, J = 6.2 Hz, 1H), 3.97 (t, J = 8.6 Hz, 2H), 3.17 – 3.08 (m, 4H), 2.99 (s, 2H), 2.87 – 2.81 (m, 2H), 2.44 (s, 3H), 2.30 (s, 3H), 1.90 (s, 1H), 1.08 (s, 6H). Example 481 – Preparation of (S)-N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide dihydrochloride.
Figure imgf000705_0001
Compound 481 Step 1: Preparation of tert-butyl (S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01410] To a solution of 2,8-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride (140 mg, 0.74 mmol) in THF (20 mL) were added TEA (951 mg, 9.40 mmol) and triphosgene(167 mg, 0.56 mmol) at 0oC, after 5 min, tert-butyl (S)-4-(2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol) was added slowly at 0 oC. The mixture was stirred at r.t for 5 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (60 mg, 25 %) as a white solid. ESI-MS (M+H) +: 506.3.1H NMR (400 MHz, CDCl3) δ 11.60 (s, 1H), 8.81 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.29 (s, 1H), 6.82 (s, 1H), 6.36 (d, J = 6.1 Hz, 1H), 4.42 – 4.24 (m, 1H), 4.21 – 4.12 (m, 2H), 4.01 – 3.90 (m, 1H), 3.58 – 3.48 (m, 1H), 3.47 – 3.38 (m, 1H), 3.29 – 3.19 (m, 1H), 3.14 – 3.05 (m, 3H), 3.00 – 2.90 (m, 1H), 2.59 (s, 3H), 2.45 (s, 3H), 1.49 (s, 9H), 1.30 (d, J = 6.7 Hz, 3H). [01411] Step 2: Preparation of (S)-N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide dihydrochloride. [01412] To a mixture of tert-butyl (S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title product (32.15 mg, 67%) as a white solid. ESI-MS (M+H) +:406.2.1H NMR (400 MHz, DMSO-d6) δ 14.45 (s, 1H), 12.13 (s, 1H), 9.59 (s, 1H), 9.46 (s, 1H), 9.26 (s, 1H), 8.17 (s, 1H), 7.96 (s, 1H), 7.78 (s, 1H), 6.71 (s, 1H), 4.12 – 4.02 (m, 2H), 3.86 – 3.80 (m, 2H), 3.37 – 3.30 (m, 3H), 3.25 – 3.18 (m, 2H), 3.14 – 3.05 (m, 2H), 2.59 (s, 3H), 2.48 (s, 3H), 1.31 (d, J = 6.5 Hz, 3H). Example 482 – Preparation of (R)-N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000706_0001
Compound 482 Step 1: Preparation of tert-butyl (R)-4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01413] A mixture of 2,8-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride (149 mg, 0.755 mmol), triphosgene (224 mg, 0.755 mmol) and TEA (762 mg, 7.547 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.629 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo to afford title product (100 mg, crude) as a yellow solid. ESI-MS (M+H) +: 506.3. Step 2: Preparation of (R)-N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01414] A mixture of tert-butyl (R)-4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.158 mmol) in 4M HCl /EA (5 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (52 mg, 63.3 %) as a white solid. ESI-MS (M+H) +: 406.2.1H NMR (400 MHz, DMSO-d6) δ 11.64 (s, 1H), 8.82 (s, 1H), 8.29 (s, 2H), 7.93 (d, J = 6.0 Hz, 1H), 7.66 (s, 1H), 6.94 (s, 1H), 6.57 (d, J = 6.1 Hz, 1H), 3.97 (t, J = 8.5 Hz, 2H), 3.69 (d, J = 12.6 Hz, 2H), 3.21 – 3.03 (m, 5H), 3.00 – 2.91 (m, 1H), 2.85 – 2.76 (m, 1H), 2.44 (s, 3H), 2.31 (s, 3H), 1.18 (d, J = 6.3 Hz, 3H). Example 483 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-((3R,5S)- 3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide dihydrochloride.
Figure imgf000707_0001
Step 1: Preparation of 6-bromo-2,8-dimethylimidazo[1,2-a]pyridine. [01415] To a solution of 5-bromo-3-methylpyridin-2-amine (20 g, 106.95 mmol) in IPA (400 mL) were added 1-bromo-2,2-dimethoxypropane (29 g, 160.42 mmol), PPTS (2.7 g, 10.70 mmol) at 0℃. The mixture was stirred at 85 ℃ for 48 h. The precipitate was filtered, washed with IPA (50 mL) and dried to give crude product. The residue was dissolved in H2O (50 mL), adjusted PH= 11 by sat. Na2CO3. The precipitate was filtered, washed with H2O (20 mL) and dried to give title product (12 g, 49%) as a white solid. ESI-MS (M+H) +:227.0.1H NMR (400 MHz, DMSO-d6) δ 8.67 (d, J = 0.8 Hz, 1H), 7.66 (s, 1H), 7.18 (s, 1H), 2.45 (s, 3H), 2.34 (s, 3H). Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine. [01416] To a solution of 6-bromo-2,8-dimethylimidazo[1,2-a]pyridine (11 g, 48.46 mmol) in 1,4-dioxane (200 mL) were added diphenylmethanimine (13 g, 72.69 mmol), Cs2CO3 (31 g, 96.92 mmol), BINAP (6 g, 9.69 mmol), Pd(OAc)2 (1.1 g, 4.84 mmol). The mixture was stirred at 115 ℃ for 16 h. The reaction mixture was diluted with water (200 mL) and extracted with EA (200 mL x 3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE: EA=1:1) to give title product (12 g, yield: 75 %) as a yellow oil. ESI-MS (M+H) +:326.1. Step 3: Preparation of 2,8-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride. [01417] To a solution of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (11 g, 33.84 mmol) in EA (100 mL) was added 4M HCl/EA (100 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered, washed with EA (100 mL) and dried in vacuo to give title product (6 g, 90%) as a white solid. ESI-MS (M+H) +: 162.1. 1H NMR (400 MHz, DMSO-d6) δ 8.09 (s, 1H), 8.01 (s, 1H), 7.32 (s, 1H), 2.53 (s, 3H), 2.45 (s, 3H). Step 4: Preparation of tert-butyl (2R,6S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01418] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150- mg, 0.45 mmol) in THF (20 mL) were added 2,8-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride (130 mg, 0.67 mmol), TEA (910 mg, 9.00 mmol), triphosgene (160 mg, 0.54 mmol) (in THF (0.5 mL) ) at 0℃. The reaction mixture was stirred at r.t for 5 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (40 mg, 17 %) as a white solid. ESI-MS (M+H) +: 520.3.1H NMR (400 MHz, CDCl3) δ 11.60 (s, 1H), 8.82 (s, 1H), 7.94 (d, J = 6.0 Hz, 1H), 7.29 (s, 1H), 6.83 (s, 1H), 6.40 (d, J = 6.1 Hz, 1H), 4.30 – 4.23 (m, 2H), 4.19 – 4.12 (m, 2H), 3.47 – 3.42 (m, 2H), 3.18 – 3.11 (m, 2H), 3.05 – 2.98 (m, 2H), 2.59 (s, 3H), 2.46 (s, 3H), 1.50 (s, 9H), 1.37 (d, J = 6.8 Hz, 6H). Step 5: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide dihydrochloride. [01419] To a mixture of tert-butyl (2R,6S)-4-(1-((2,8-dimethylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (30 mg, 0.10 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title product (16.11 mg, 60%) as a white solid. ESI-MS (M+H) +:420.2.1H NMR (400 MHz, DMSO-d6) δ 14.28 (s, 1H), 12.14 (s, 1H), 9.52 (s, 1H), 9.28 (s, 1H), 9.06 (s, 1H), 8.16 (s, 1H), 7.97 (d, J = 5.9 Hz, 1H), 7.76 (s, 1H), 6.70 (s, 1H), 4.08 – 3.99 (m, 2H), 3.92 – 3.83 (m, 2H), 3.35 – 3.31 (m, 2H), 3.23 – 3.16 (m, 2H), 3.04 – 2.96 (m, 2H), 2.58 (s, 3H), 2.49 (s, 3H), 1.30 (d, J = 6.4 Hz, 6H). Example 484 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000709_0001
Step 1: Preparation of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [01420] To a solution of 2,7-dimethylimidazo[1,2-a]pyridin-6-amine (47 mg, 0.29 mmol) and TEA (292 mg, 2.89 mmol) in THF (15 mL) was added triphosgene (86 mg, 0.29 mmol) at 0oC, after 10 min, tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (80 mg, 0.24 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and concentrated in vacuo to give the compound (50 mg, 40 %) as a white solid. ESI- MS (M+H) +:520.2.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 9.06 (s, 1H), 8.73 (s, 1H), 8.23 (s, 1H), 7.83 (d, J = 6.1 Hz, 1H), 6.41 (d, J = 6.3 Hz, 1H), 3.99 – 3.93 (m, 2H), 3.72 – 3.68 (m, 2H), 3.59 – 3.56 (m, 2H), 3.54 (s, 2H), 3.30 – 3.29 (m, 2H), 2.39 (s, 3H), 2.32 (s, 3H), 1.43 (s, 9H), 1.38 (s, 6H). Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3,3-dimethylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01421] To a mixture of tert-butyl 4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% NH3.H2O in H2O / ACN) to give title product (9.53 mg, 28%) as a white solid. ESI-MS (M+H) +:420.2.1H NMR (400 MHz, DMSO-d6) δ 11.69 (s, 1H), 9.06 (s, 1H), 7.87 (d, J = 6.1 Hz, 1H), 7.61 (s, 1H), 7.30 (s, 1H), 6.50 (d, J = 6.2 Hz, 1H), 3.98 (t, J = 8.5 Hz, 2H), 3.18 – 3.10 (m, 4H), 3.00 (s, 2H), 2.87 – 2.80 (m, 2H), 2.39 (s, 3H), 2.28 (s, 3H), 1.90 (s, 1H), 1.08 (s, 6H). Example 485 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2- a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000710_0001
Step 1: Preparation of tert-butyl 2,2-dimethyl-4-(1-((2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01422] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2-methylimidazo[1,2-a]pyrimidin-6- amine (66.60 mg, 0.45 mmol) and TEA (136.35 mg, 1.35 mmol) in THF (5 mL) was added triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (60 mg, 26.35%) as a yellow solid. ESI-MS (M+H) +: 507.2. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2-a]pyrimidin- 6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01423] A mixture of tert-butyl 2,2-dimethyl-4-(1-((2-methylimidazo[1,2-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in water / CH3CN) to give title product (2.76 mg, 4.42%) as a yellow solid. ESI-MS (M+H) +:407.2.1H NMR (400 MHz, MeOD-d4) δ 9.21 (d, J = 2.4 Hz, 1H), 8.43 (d, J = 2.4 Hz, 1H), 8.00 (d, J = 6.0 Hz, 1H), 7.55 (s, 1H), 6.56 (d, J = 6.0 Hz, 1H), 4.13 – 4.03 (m, 2H), 3.50 – 3.44 (m, 2H), 3.42 – 3.37 (m, 2H), 3.29 – 3.26 (m, 2H), 3.17 – 3.09 (m, 2H), 2.42 (s, 3H), 1.48 (s, 6H). Example 486 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-b]pyridazin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000711_0001
Step 1: Preparation of methyl 6-chloro-3-methoxypyridazine-4-carboxylate. [01424] To a solution of methyl 3,6-dichloropyridazine-4-carboxylate (15.00 g, 72.46 mmol) in THF (150 mL) was added Sodium Methoxide (30% in MeOH, 18.2 mL) at 0°C. The reaction mixture was stirred at 0°C for 0.5 h. The mixture was quenchend with Saturated ammonium chloride solution (150 mL) and diluted with water (150 mL), extracted with EA (500 mL×3). The combined organic layers was washed with brine (500 mL) ,dried over Na2SO4, filtered and concentrated in vacuo to give title compound (11.00 g, , yield: 74 %) as a yellow solid. ESI-MS (M+H)+: 202.9. Step 2: Preparation of methyl 3-methoxy-6-(prop-1-yn-1-yl)pyridazine-4-carboxylate. [01425] To a solution of methyl 6-chloro-3-methoxypyridazine-4-carboxylate (3.00 g, 14.81 mmol) in DMF (30 mL) were added CuI (282 mg, 1.48 mmol), Pd(PPh3)2Cl2 (1.04 mg, 1.48 mmol), TEA (4.33 g, 59.23 mmol) and prop-1-yne (29.62 ml , 29.62 mmol, 1mol/L in THF), the mixture was stirred at 80°C for 2 h in seal tube. The mixture was diluted with water (50 mL) and extracted with EA (100 mL×3). The combined organic layers was washed with brine (50 mL×8), dried over Na2SO4.,filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE:EA =10:1) to give title compound (3.40 g, Y:41.8%) as a yellow solid. ESI-MS (M+H)+: 207.1. Step 3: Preparation of 1-amino-3-methoxy-4-(methoxycarbonyl)-6-(prop-1-yn-1- yl)pyridazin-1-ium. [01426] To a solution of (aminooxy)sulfonic acid (4.00 g, 35.37 mmol) in H2O (36 mL) was added KHCO3 (1.77 g, 17.69 mmol). The mixture was stirred at rt for 10 min. Then methyl 3-methoxy-6-(prop-1-yn-1-yl)pyridazine-4-carboxylate (2.41 g, 11.67 mol) was added, the mixture was stirred at 70°C for 16 h. The mixture was added KI (2.94 g, 7.34 mmol) was added, the mixture was concentrated in vacuo and the residue dissolve in ACN (26 mL) was added DBU (6 mL). The mixture was stirred at rt for 4 h. The mixture was was concentrated in vacuo and diluted with water (50 mL) ,extracted with EA (100 mL×3). The combined organic layers weas washed with brine (100 mL), dried over Na2SO4, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (DCM:MeOH =100:1) to give title compound (260 mg, yield:7 %) as a yellow solid. ESI-MS (M+H)+: 222.0. Step 4: Preparation of 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5-carboxylic acid. [01427] To a solution of methyl 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5- carboxylate (240 mg, 1.08 mmol) in MeOH:H2O=3:1 (12 mL) was added LiOH.H2O (364 mg, 8.68 mmol). The mixture was stirred at rt for 1 h. The mixture was diluted with water (10 mL) and adjusted pH = 1 with (2M) HCl aq, extracted with DCM (30 mL×3) .The combined organic layers was washed with brine (30 mL) , dried over Na2SO4, filtered and concentrated in vacuo to give title compound (230 mg, yield: 94 %) as a yellow solid. ESI-MS (M+H)+: 208.0. Step 5: Preparation of tert-butyl 4-(1-((6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01428] To a solution of 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5-carboxylic acid (200 mg, 0.965 mmol) in toluene (7 mL) were added TEA (293 mg, 2.90 mmol) and DPPA (664 mg, 2.41 mmol). The mixture was stirred at rt for 3 h,then heated to 90°C for 1 h. Then tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (254 mg, 0.772 mmol) was added, the mixture was stirred at 90°C for 6 h. The mixture was diluted with water (20 mL) and extracted with DCM:MeOH =10:1( 30 ml ×3 ) , dried over Na2SO4, filtered and concentrated in vacuo. The crude was purified by was purified by silica gel column chromatography (DCM:MeOH =30:1) to give title compound (80 mg yield: 13.4 %) as a yellow solid. ESI-MS (M+H)+: 537.2. Step 6: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methylpyrazolo[1,5- b]pyridazin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01429] To a solution of tert-butyl 4-(1-((6-methoxy-2-methylpyrazolo[1,5- b]pyridazin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in DCM (1.0 mL) was added TFA (0.5 ml) . The mixture was stirred at rt for 2 h. The mixture concentrated in vacuo,the crude was purified by Prep-HPLC (0.1% TFA in H2O/MeCN) to give the title compound (17.14 mg, yield: 20 %) as a white solid. ESI-MS (M+H)+: 437.1.1H NMR (400 MHz, DMSO-d6)δ 12.41 (s, 1H), 8.51 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 6.59 (d, J = 6.0 Hz, 1H), 6.30 (s ,1H), 4.10 (s, 3H), 4.04– 3.96 (m, 2H), 3.38 – 3.33 (m, 2H), 3.19 (s, 2H), 3.17 – 3.12 (m, 4H), 2.32 (s, 3H), 1.27(s, 6H).
Example 487 – Preparation of (R)-N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide
Figure imgf000714_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01430] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.37 mmol), 2,7-dimethylimidazo[1,2-a]pyridin-6- amine (89 mg, 0.45 mmol), triphosgene (133 mg, 0.45 mmol) and TEA (457 mg, 4.53 mmol) in THF (12 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (50 mg, 43%) as a yellow solid. ESI-MS (M+H) +: 506.3. Step 2: Preparation of (R)-N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01431] A mixture of tert-butyl (R)-4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (50 mg, 0.10 mmol) in 4M HCl / EA (20 mL) was stirred at RT for 2 h. The precipitate was filtered and dried to give title product (13.49 mg, 33.73 %) as a white solid. ESI-MS (M+H) +:406.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 9.39 (s, 1H), 7.99 (d, J = 6.5 Hz, 2H), 7.77 (s, 1H), 6.69 (d, J = 6.2 Hz, 1H), 4.08 (t, J = 8.3 Hz, 2H), 3.85 – 3.81 (m, 2H), 3.44 – 3.35 (m, 2H), 3.31 – 3.19 (m, 3H), 3.17 – 3.04 (m, 2H), 2.57 (s, 3H), 2.45 (s, 3H), 1.31 (d, J = 6.5 Hz, 3H). Example 488 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methyl-2H-benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000715_0001
Step 1: Preparation of tert-butyl (4-methyl-5-nitropyridin-2-yl)carbamate. [01432] To a solution of 4-methyl-5-nitropyridin-2-amine (10 g, 65.36 mmol) in THF (100 mL) was added NaH (3.4 g, 84.97 mmol) at 0 ℃. The mixture was stirred at 0 oC for 1 h. Then Boc2O (21.4 g, 98.04 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (120 mL) and extracted with ethyl acetate (100 mL*3). The organic extracts were concentrated to dryness to give title product (9.5 g, 57.6 %) as a white solid. ESI-MS (M+H) +: 254.1.1H NMR (400 MHz, DMSO-d6) δ 10.53 (s, 1H), 8.92 (s, 1H), 7.88 (s, 1H), 2.59 (s, 3H), 1.49 (s, 9H). Step 2: Preparation of tert-butyl (5-amino-4-methylpyridin-2-yl)carbamate. [01433] A solution of tert-butyl (4-methyl-5-nitropyridin-2-yl)carbamate (600 mg, 2.37 mmol) in dry ethanol (20 mL) was added 10% Pd/C (100 mg). The reaction mixture was stirred at r.t for 4 h under H2. The solution was filtered through a celite pad to remove the catalyst and the filtrate was evaporated to dryness to give title product (450 mg, 85.1 %) as a yellow solid. ESI-MS (M+H) +: 224.1. Step 3: Preparation of tert-butyl (5-acetamido-4-methylpyridin-2-yl)carbamate. [01434] To a solution of tert-butyl (5-amino-4-methylpyridin-2-yl)carbamate (8.4 g, 37.67 mmol) in DCM (100 mL) were added Ac2O (4.2 g, 41.43 mmol).The reaction mixture was stirred at RT for 5 h. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=3/2) to give title product (7.5 g, 75.2 %) as a yellow solid. ESI-MS (M+H) +: 266.1.1H NMR (400 MHz, DMSO-d6) δ 9.62 (s, 1H), 9.38 (s, 1H), 8.12 (s, 1H), 7.66 (s, 1H), 2.18 (s, 3H), 2.04 (s, 3H), 1.47 (s, 9H). Step 4: Preparation of tert-butyl (1-acetyl-1H-pyrazolo[3,4-c]pyridin-5-yl)carbamate. [01435] To a solution of tert-butyl (5-acetamido-4-methylpyridin-2-yl)carbamate (7 g, 26.42 mmol) in CHCl3 (80 mL) were added KOAc (3.1 g, 31.7 mmol), Ac2O (10.8 g, 105.66 mmol). The reaction mixture was stirred at 70 oC for 1 h. Then 2-methyl-2-nitropropane (5.44 g, 52.83 mmol ) and 18-crown-6 (700 mg, 2.64 mmol) was added to the reaction mixture and stirred at 65 oC for 16 h. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=1/2) to give title product (1.5 g, 20.6 %) as a yellow solid. ESI-MS (M+H) +: 277.1.1H NMR (400 MHz, DMSO-d6) δ 10.03 (s, 1H), 9.25 (s, 1H), 8.55 (d, J = 0.5 Hz, 1H), 8.23 (d, J = 1.2 Hz, 1H), 2.71 (s, 3H), 1.50 (s, 9H). Step 5: Preparation of tert-butyl (2H-pyrazolo[3,4-c]pyridin-5-yl)carbamate. [01436] To a solution of tert-butyl (1-acetyl-1H-pyrazolo[3,4-c]pyridin-5-yl)carbamate (1.5 g, 5.43 mmol) in DCM (15 mL) was added NH3 in MeOH (7 mL, 7 M). The reaction mixture was stirred at r.t for 16 h. The mixture was concentrated to give title product (1.2 g, 94 %) as a white solid. ESI-MS (M+H) +: 235.1.1H NMR (400 MHz, DMSO-d6) δ 9.56 (s, 1H), 8.75 (s, 1H), 8.13 (s, 1H), 8.04 (d, J = 0.9 Hz, 1H), 1.49 (s, 9H). Step 6: Preparation of tert-butyl (2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)carbamate. [01437] To a solution of tert-butyl (2H-pyrazolo[3,4-c]pyridin-5-yl)carbamate (1.27 g, 5.43 mmol) in EA (15 mL) was added trimethyloxonium tetrafluoroborate (803 mg, 5.43 mmol). The mixture was stirred at r.t for 1 h. The mixture was concentrated in vacuo and purified by column gel chromatography (PE/EA=1/1) to give title product (1 g, 74 %) as a yellow solid. ESI-MS (M+H) +: 249.2.1H NMR (400 MHz, DMSO-d6) δ 9.42 (s, 1H), 8.91 – 8.87 (m, 1H), 8.34 (s, 1H), 7.91 – 7.87 (m, 1H), 4.21 (s, 3H), 1.48 (s, 9H). Step 7: Preparation of 2-methyl-2H-pyrazolo[3,4-c]pyridin-5-amine hydrochloride. [01438] To a solution of tert-butyl (2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamate (80 mg, 0.323 mmol) in HCl in EA (3 mL,4 M). The mixture was stirred at RT for 16 h. The reaction mixture was dried in vacuo to give title product (50 mg, 84.7 %) as a yellow solid. ESI-MS (M+H) +: 149.2.1H NMR (400 MHz, DMSO) δ 9.27 (s, 1H), 8.50 (s, 1H), 7.24 (s, 1H), 4.31 (s, 3H). Step 8: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01439] A mixture of 2-methyl-2H-pyrazolo[3,4-c]pyridin-5-amine hydrochloride (60 mg, 0.326 mmol), triphosgene (97 mg, 0.326 mmol) and TEA (329 mg, 3.261 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (86 mg, 0.272 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo. The solid was triturated with MeOH (3 mL*2) to afford title product (27 mg, pure: 71%) as a white solid. ESI-MS (M+H) +: 493.2. Step 9: Preparation of (S)-N-(2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01440] A mixture of tert-butyl (S)-2-methyl-4-(1-((2-methyl-2H-pyrazolo[3,4- c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (20 mg, 0.041 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 2 h. The reaction mixture was concentrated and the solid was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (7 mg, 40.2 %) as a white solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 8.89 (s, 1H), 8.23 (d, J = 7.7 Hz, 2H), 8.04 (d, J = 5.9 Hz, 1H), 6.60 (d, J = 6.0 Hz, 1H), 4.27 (s, 3H), 4.12 (t, J = 8.5 Hz, 2H), 3.79 (d, J = 13.3 Hz, 2H), 3.49 – 3.41 (m, 2H), 3.27 – 3.13 (m, 4H), 2.95 (dd, J = 13.5, 10.4 Hz, 1H), 1.37 (d, J = 6.5 Hz, 3H). Example 489 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2- methylimidazo[1,2-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000718_0001
Compound 489 Step 1: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methylimidazo[1,2- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01441] To a mixture of 2-methylimidazo[1,2-a]pyrimidin-6-amine (66.88 mg, 0.45 mmol), tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) and TEA (136.35 mg, 1.35 mmol) in THF (5 mL) was added triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (50 mg, 21.96%) as a yellow solid. ESI-MS (M+H) +: 507.4. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(2-methylimidazo[1,2- a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01442] A mixture of tert-butyl (2R,6S)-2,6-dimethyl-4-(1-((2-methylimidazo[1,2- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (50 mg, 0.10 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (9.9 mg, 21.90%) as a yellow solid. ESI-MS (M+H) +:407.2.1H NMR (400 MHz, DMSO-d6) δ 11.90 (s, 1H), 9.28 (d, J = 2.5 Hz, 1H), 8.47 (d, J = 2.5 Hz, 1H), 8.18 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.69 (s, 1H), 6.60 (d, J = 6.1 Hz, 1H), 4.03 – 3.97 (m, 2H), 3.77 – 3.74 (m, 2H), 3.18 – 3.10 (m, 4H), 2.71 – 2.64 (m, 2H), 2.35 (s, 3H), 1.15 (d, J = 6.2 Hz, 6H). Example 490 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000719_0001
Compound 490 Step 1: Preparation of tert-butyl (2S,6R)-2,6-dimethyl-4-(1-((2-methylpyrazolo[1,5-a]pyridin- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01443] A mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), phenyl (2- methylpyrazolo[1,5-a]pyridin-5-yl)carbamate (120 mg, 0.45 mmol) and TEA (91 mg, 0.90 mmol) in THF (20 mL) was stirred at 70 oC for 16 h. The mixture was concentrated and the residue was purified by silica gel column chromatography (PE: EA=1:2) to give the title compound (120 mg, yield: 79%) as a green solid. ESI-MS (M+H) +:506.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (s, 1H), 8.45 (d, J = 7.5 Hz, 1H), 8.12 (d, J = 7.4 Hz, 1H), 7.84 (d, J = 2.0 Hz, 1H), 6.86 (dd, J = 7.5, 2.3 Hz, 1H), 6.28 (d, J = 2.3 Hz, 1H), 6.22 (s, 1H), 4.04 – 3.99 (m, 2H), 3.60 (d, J = 12.4 Hz, 2H), 3.31 – 3.28 (m, 2H), 3.16 – 3.13 (m, 2H), 3.00 (d, J = 8.2 Hz, 2H), 2.33 (s, 3H), 1.43 (s, 9H), 1.25 (d, J = 6.2 Hz, 6H). Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(2-methylpyrazolo[1,5- a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01444] To a solution of tert-butyl (2S,6R)-2,6-dimethyl-4-(1-((2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.20 mmol) in EA (2 mL) was added 4M HCl/EA (6 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title product (18.91 mg, 21%) as a pink solid. ESI-MS (M+H) +:406.0.1H NMR (400 MHz, DMSO-d6) δ 12.09 (s, 1H), 8.44 (d, J = 7.4 Hz, 1H), 8.26 (s, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.83 (s, 1H), 6.85 (dd, J = 7.5, 2.1 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 6.21 (s, 1H), 3.97 (t, J = 8.5 Hz, 2H), 3.62 (d, J = 12.1 Hz, 2H), 3.13 (t, J = 8.5 Hz, 2H), 2.87 – 2.80 (m, 2H), 2.43 (t, J = 11.5 Hz, 2H), 2.33 (s, 3H), 1.02 (d, J = 6.2 Hz, 6H). Example 491 – Preparation of (S)-4-(3-methylpiperazin-1-yl)-N-(2-methylpyrazolo[1,5- a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000720_0001
Boc H Compound 491 Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01445] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), phenyl (2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamate (125 mg, 0.47 mmol) and TEA (95 mg, 0.94 mmol) in THF (10 mL) was stirred at 70 oC for 16 h. The mixture was concentrated and the residue was purified by silica gel column chromatography (EA) to give the title compound (120 mg, yield: 78%) as a white solid. ESI-MS (M+H) +:492.2.1H NMR (400 MHz, DMSO-d6) δ 12.04 (s, 1H), 8.45 (d, J = 7.5 Hz, 1H), 7.83 (d, J = 2.0 Hz, 1H), 6.85 (dd, J = 7.5, 2.3 Hz, 1H), 6.55 (d, J = 4.1 Hz, 1H), 6.53 (d, J = 4.3 Hz, 1H), 6.21 (s, 1H), 3.99 (t, J = 6.9 Hz, 2H), 3.79 (d, J = 13.1 Hz, 2H), 3.58 – 3.43 (m, 4H), 2.95 (dd, J = 12.3, 3.3 Hz, 2H), 2.87 – 2.82 (m, 1H), 2.33 (s, 3H), 1.42 (s, 9H), 1.20 (d, J = 4.0 Hz, 3H). Step 2: Preparation of (S)-4-(3-methylpiperazin-1-yl)-N-(2-methylpyrazolo[1,5-a]pyridin-5- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01446] To a solution of tert-butyl (S)-2-methyl-4-(1-((2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (100 mg, 0.20 mmol) in EA (2 mL) was added 4M HCl/EA (6 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title product (39.29 mg, 45%) as a pink solid. ESI-MS (M+H) +:392.0.1H NMR (400 MHz, DMSO-d6) δ 12.07 (s, 1H), 8.45 (d, J = 7.4 Hz, 1H), 8.26 (s, 1H), 7.92 (d, J = 6.1 Hz, 1H), 7.83 (d, J = 2.0 Hz, 1H), 6.84 (dd, J = 7.5, 2.3 Hz, 1H), 6.54 (d, J = 6.2 Hz, 1H), 6.21 (s, 1H), 3.97 (t, J = 8.5 Hz, 2H), 3.62 (d, J = 12.0 Hz, 2H), 3.12 (t, J = 8.5 Hz, 2H), 2.99 (d, J = 11.5 Hz, 1H), 2.91 – 2.76 (m, 3H), 2.59 – 2.53 (m, 1H), 2.33 (s, 3H), 1.05 (d, J = 6.3 Hz, 3H). Example 492 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide diformate.
Figure imgf000721_0001
Compound 492 Step 1: Preparation of tert-butyl (2S,6R)-2,6-dimethyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01447] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-amine (67 mg, 0.36 mmol) and TEA (456 mg, 4.52 mmol) in THF (10 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered, triturated with MeOH (5mL) to get title product (70 mg, Y: 45.8 %) as a brown solid. ESI-MS (M+H) +:508.4. Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01448] To a solution of tert-butyl (2S,6R)-2,6-dimethyl-4-(1-((2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)piperazine-1-carboxylate (50 mg, 0.10 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipiate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (37 mg, 62.7 %) as a white solid. ESI-MS (M+H)+:408.2.1H NMR (400 MHz, MeOD-d4) δ 9.57 (d, J = 2.4 Hz, 1H), 8.86 (d, J = 2.5 Hz, 1H), 8.40 (s, 2H), 8.02 (d, J = 5.8 Hz, 1H), 6.61 (d, J = 6.1 Hz, 1H), 4.12 (t, J = 8.5 Hz, 2H), 3.87 – 3.81 (m, 2H), 3.39 – 3.34 (m, 2H), 3.21 (t, J = 8.2 Hz, 2H), 2.83 – 2.75 (m, 2H), 2.55 (s, 3H), 1.32 (d, J = 6.5 Hz, 6H). Example 493 – Preparation of (S)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000722_0001
Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate. [01449] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-amine (70 mg, 0.38 mmol), TEA (476 mg, 4.72 mmol) in THF (10 mL) was added triphosgene (112 mg, 0.38 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered, triturated with MeOH (5 mL), filtered and concentrated in vacuo to get title product (70 mg, Y: 45.1 %) as a brown solid. ESI-MS (M+H) +:494.4. Step 2: Preparation of (S)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01450] To a solution of tert-butyl (S)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (60 mg, 0.12 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (35 mg, 65.5 %) as a white solid. ESI-MS (M+H)+:394.2.1H NMR (400 MHz, MeOD-d4) δ 9.55 (d, J = 2.5 Hz, 1H), 8.83 (d, J = 2.6 Hz, 1H), 8.49 (s, 1H), 7.99 (d, J = 6.0 Hz, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.11 (t, J = 8.5 Hz, 2H), 3.80 – 3.75 (m, 2H), 3.41 – 3.34 (m, 2H), 3.22 – 3.13 (m, 4H), 2.90 (dd, J = 13.4, 10.4 Hz, 1H), 2.55 (s, 3H), 1.34 (d, J = 6.5 Hz, 3H). Example 494 – Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide HCl salt.
Figure imgf000723_0001
Step 1: Preparation of tert-butyl 7-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01451] To a solution of 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylic acid (87 mg, 0.45 mmol) and TEA (122 mg, 1.21 mmol) in tol (5 mL) was added DPPA (233 mg, 0.85 mmol), the mixture was stirred at RT for 1 h and 90 oC for 1 h, after 2 h, tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.303 mmol) was added to the mixture and stirred at 110 oC for 4 h. The mixture was diluted with water (10 mL) extracted with EA (20 mL×3). The organic layer was washed with brine (20 mL), dried with Na2SO4 and concentrated in vacuo, triturate with MeOH (5 mL) to give title product (50 mg, yield: 31.79 %) as a yellow solid. ESI-MS (M+H) +: 520.3. Step 2: Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide HCl salt. [01452] A mixture of tert-butyl 7-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (50 mg, 0.09 mmol) in HCl/EA (2 mL, 4 M) was stirred at r.t for 2 h. The precipitate was filtered and dried to give title product (7.9 mg, 20.94 %) as a yellow solid. ESI-MS (M+H) +: 420.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 9.45 (s, 1H), 7.91 (d, J = 6.4 Hz, 1H), 6.74 (d, J = 6.0 Hz, 1H), 4.18 – 4.10 (m, 2H), 3.71 – 3.67 (m, 2H), 3.60 – 3.55 (m, 2H), 3.38 – 3.34 (m, 2H), 3.29 – 3.22 (m, 2H), 2.68 (s, 3H), 2.49 (s, 3H), 1.13 – 1.09 (m, 2H), 1.00 – 0.96 (m, 2H). Example 495 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2- methyl-2H-benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000724_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01453] To a solution of 6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine hydrochloride (91 mg, 0.45 mmol) and TEA (457 mg, 4.52 mmol) in THF (15 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (120 mg, 0.37 mmol) was added at 0oC to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (40 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (110 mg, 57.17 %) as a white solid. ESI-MS (M+H) +:525.3. Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01454] To a mixture of tert-butyl (S)-4-(1-((6-fluoro-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.19 mmol) in EA (2 mL) was added HCl/EA (5 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % HCl in water / ACN) to give title product (30 mg, Y: 63.51 %) as a white solid. ESI-MS (M+H) +:425.4.1H NMR (400 MHz, DMSO-d6) δ 12.32 (d, J = 2.8 Hz, 1H), 9.20 (s, 1H), 8.66 (d, J = 7.2 Hz, 1H), 8.58 (d, J = 10.4 Hz, 1H), 7.95 (d, J = 6.0 Hz, 1H), 7.86 (d, J = 11.2 Hz, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.44 (s, 3H), 4.05 (t, J = 8.5 Hz, 2H), 3.94 – 3.85 (m, 2H), 3.45 – 3.40 (m, 2H), 3.23 – 3.16 (m, 2H), 2.94 – 2.85 (m, 2H), 1.27 (d, J = 6.4 Hz, 6H). Example 496 – Preparation of (S)-N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000725_0001
4
Figure imgf000725_0002
4M
Figure imgf000725_0003
Step 1: Preparation of 4-bromo-5-fluoro-2-nitroaniline. [01455] To a mixture of 5-fluoro-2-nitroaniline (10.0 g, 64.10 mmol) in AcOH (50 mL) was added NBS (11.4 g, 64.10 mmol) under N2 at 25℃, then the reaction was stirred at 110℃ for 1.5 h. The reaction was diluted with EA (100 mL) and washed with water (100 mLx3) and brine (100 mL). The organic extract was dried over Na2SO4, and the solvent was removed to afford the crude product. The crude product was purified by column flash chromatography (EA/PE=0%~5%) to afford the title product (10.0 g, 66.6 % yield) as a yellow solid. ESI-MS (M+H) +: 235.01H NMR (400 MHz, DMSO-d6) δ 8.25 (d, J = 7.4 Hz, 1H), 7.71 (s, 2H), 6.93 (d, J = 11.0 Hz, 1H). Step 2: Preparation of 4-bromo-5-fluorobenzene-1,2-diamine. [01456] To a solution of 4-bromo-5-fluoro-2-nitroaniline (22.7 g, 96.59 mmol) in EtOH/H2O=5/1 (600 mL) were added NH4Cl (38.7 g, 0.72 mol) and Fe (53.94 g, 0.96 mol). The mixture was stirred at 90 oC for 4 h. The mixture was filtered and the filtrate was concentrated. The crude was triturated with PE: EA (500 mL, 10:1), then filtered and lyophilized to give title product (29 g, 73.52 %) as a yellow solid. ESI-MS (M+H) +:207.0. Step 3: Preparation of 5-bromo-6-fluoro-2H-benzo[d][1,2,3]triazole. [01457] To a solution of 4-bromo-5-fluorobenzene-1,2-diamine (20 g, 97.55 mmol) in AcOH:H2O=1:4 (100 mL) was added NaNO2 (33.6 g, 0.49 mol). The mixture was stirred at r.t for 1 h.The mixture was diluted with water (100 mL). The precipitate was filtered to give the compound (16 g, 75.93 %) as a yellow solid. ESI-MS (M+H) +:217.9.1H NMR (400 MHz, DMSO-d6) δ 8.48 (d, J = 6.1 Hz, 1H), 8.02 (d, J = 8.5 Hz, 1H). Step 4: Preparation of 5-bromo-6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazole. [01458] To a solution of 5-bromo-6-fluoro-2H-benzo[d][1,2,3]triazole (15 g, 69.44 mmol) in Toluene (160 mL) was added DMF-DMA (13.84 mL, 104.16 mmol). The mixture was stirred at 120oC for 1 h. The reaction was concentrated and purified by SGC (PE/EA=0- 100%) to give product (7 g, 43.82 %) as yellow solid. ESI-MS (M+H) +:232.0.1H NMR (400 MHz, CDCl3) δ 8.04 (d, J = 6.2 Hz, 1H), 7.47 (d, J = 8.2 Hz, 1H), 4.41 (s, 3H). Step 5: Preparation of N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01459] To a solution of 5-bromo-6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazole (500 mg, 212.17mmol), diphenylmethanimine (6.5 g, 28.26 mmol), Cs2CO3 (27.83 g, 84.77 mmol) and Pd(OAc)2 (2.59 g, 2.83 mmol) in 1,4-dioxane(100 mL) was added BINAP (3.27 g, 5.65 mmol), the mixture was stirred for 16 h at 100oC under N2. The mixture was purified by silica gel column chromatography (PE: EA= 1: 2) to give title product (10 g, crude) as a yellow solid. ESI-MS (M+H) +:331.2. Step 6: Preparation of 6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine hydrochloride. [01460] The mixture of N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (9 g, 27.24 mmol) in 4M HCl/EA (100 mL) was stirred at r.t for 16 h. The precipitate was filtered and triturated with EA (500 mL) and filtered to give the title compound (3 g, 54.35 %) as a white solid. ESI-MS (M+H) +:167.1.1H NMR (400 MHz, DMSO-d6) δ 7.80 (d, J = 10.7 Hz, 1H), 7.63 (d, J = 7.6 Hz, 1H), 4.42 (s, 3H). Step 7: Preparation of tert-butyl (S)-4-(1-((6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01461] To a solution of 6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine hydrochloride (91 mg, 0.45 mmol) and TEA (457 mg, 4.52 mmol) in THF (15 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (120 mg, 0.37 mmol) was added at 0oC to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (40 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (110 mg, 57.17 %) as a white solid. ESI-MS (M+H) +:511.3. Step 8: Preparation of (S)-N-(6-fluoro-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01462] To a mixture of tert-butyl (S)-4-(1-((6-fluoro-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.19 mmol) in EA (2 mL) was added HCl/EA (5 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (30 mg, Y: 63.51 %) as a white solid. ESI-MS (M+H) +:411.2.1H NMR (400 MHz, DMSO-d6) δ 12.33 (s, 1H), 8.64 (d, J = 7.1 Hz, 1H), 8.26 (s, 1H), 7.91 (d, J = 5.9 Hz, 1H), 7.83 (d, J = 11.1 Hz, 1H), 6.58 (d, J = 6.0 Hz, 1H), 4.44 (s, 3H), 4.04 – 4.00 (m, 2H), 3.74 – 3.69 (m, 2H), 3.23 – 3.13 (m, 4H), 3.08 – 2.94 (m, 2H), 2.87 – 2.73 (m, 1H), 1.18 (d, J = 6.2 Hz, 3H).
Example 497 – Preparation of (S)-N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000728_0001
Step 1: Preparation of 4-bromo-5-methyl-2-nitroaniline. [01463] To a solution of 5-methyl-2-nitroaniline (10 g, 65.72 mmol) in CH3CN (30 mL) was added NBS (11.7 g, 65.72 mmol) in portions under 0oC under stirring. The mixture was stirred at room temperature for 1 h. The mixture was filtered to give the title product (15.3 g, yield: 100%) as an orange solid. ESI-MS (M+H) +: 233.1.1H NMR (400 MHz, DMSO-d6) δ 8.09 (s, 1H), 7.48 (s, 2H), 6.98 (s, 1H), 2.27 (s, 3H). Step 2: Preparation of 4-bromo-5-methylbenzene-1,2-diamine. [01464] To a solution of 4-bromo-5-methyl-2-nitroaniline (15.3 g, 66.23 mmol) in EtOH (100 mL) and H2O (20 mL) were added NH4Cl (26.6 g, 496.75 mmol) and Fe (37.1 g, 662.34 mmol). The mixture was stirred at 80oC for 1 h. The mixture was filtered and the filtrate was concentrated in vacuo. The residue was purified by silica gel column chromatography (DCM/MeOH=90%:10%) to give title product (8.1 g, yield: 87%) as a yellow solid. ESI-MS (M+H) +: 202.8.1H NMR (400 MHz, DMSO-d6) δ 6.66 (s, 1H), 6.43 (s, 1H), 4.51 (s, 4H), 2.08 (s, 3H). Step 3: Preparation of 5-bromo-6-methyl-2H-benzo[d][1,2,3]triazole. [01465] To a solution of 4-bromo-5-methylbenzene-1,2-diamine (7 g, 34.81 mmol) in H2O (20 mL) and AcOH (12 mL) was added NaNO2 (12.2 g, 174.04 mmol). The mixture was stirred at room temperature for 1 h. The pH of mixture was adjusted to ~8 by ammonium hydroxide. The mixture was then diluted with H2O (100 mL) and extracted with EA (150 mL*3). The organic layer was collected and washed by brine (200 mL), dried over Na2SO4, filtered and concentrated to give crude product (2.9 g, yield:39%) as brown solid. ESI-MS (M+H) +: 212.1. Step 4: Preparation of 5-bromo-2,6-dimethyl-2H-benzo[d][1,2,3]triazole. [01466] To a solution of 5-bromo-6-methyl-2H-benzo[d][1,2,3]triazole (2.5 g, 11.79 mmol) in toluene (20 mL) was added DMF-DMA (2 mL). The mixture was stirred at 120oC for 1 h. The mixture was diluted with H2O (20 mL), and extracted with EA (30 mL*3). The organic layer was collected and washed by brine (50 mL), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=80%:20%) to give the title product (553 mg, yield: 21%) as a yellow solid. ESI-MS (M+H) +: 228.0.1H NMR (400 MHz, DMSO-d6) δ 8.26 (s, 1H), 7.93 (s, 1H), 4.47 (s, 3H), 2.49 (s, 3H). Step 5: Preparation of N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01467] To a solution of 5-bromo-2,6-dimethyl-2H-benzo[d][1,2,3]triazole (450 mg, 1.99 mmol) in 1,4-dioxane (30 mL) were added diphenylmethanimine (433 mg, 2.39 mmol), Cs2CO3 (1945 mg, 5.97 mmol), XantPhos (231 mg, 0.40 mmol) and Pd2(dba)3 (183 mg, 0.20 mmol). The mixture was stirred at 110oC for 5 h. The mixture was diluted with H2O (30 mL), extracted with EA (50 mL*3). The organic layer was collected and washed by brine (100 mL), dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=80%:20%) and triturated with DCM:MeOH=10%:90% to give title product (326 mg, yield: 50%) as a yellow solid. ESI-MS (M+H) +: 327.1.1H NMR (400 MHz, DMSO-d6) δ 7.75 – 7.71 (m, 2H), 7.62 (s, 1H), 7.58 – 7.46 (m, 3H), 7.28 (t, J = 7.5 Hz, 3H), 7.20 (dd, J = 7.6, 1.6 Hz, 2H), 6.78 (s, 1H), 4.33 (s, 3H), 2.30 (s, 3H). Step 6: Preparation of 2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-amine. [01468] To a solution of N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (200 mg, 0.61 mmol) in MeOH (10 mL) was added hydroxylamine hydrochloride (212 mg, 3.07 mmol), CH3COONa (151 mg, 1.84 mmol). The mixture was stirred at room temperature for 1 h. The mixture was concentrated in vacuo. The residue was purified by silica gel column chromatography (PE/EA=0%:100%) to give title product (126 mg, yield: 50%) as yellow solid. ESI-MS (M+H) +: 163.2.1H NMR (400 MHz, DMSO-d6) δ 7.45 (s, 1H), 6.77 (s, 1H), 5.12 (s, 2H), 4.29 (s, 3H), 2.21 (d, J = 0.5 Hz, 3H). Step 7: Preparation of tert-butyl (S)-4-(1-((2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01469] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 2,6-dimethyl-2H- benzo[d][1,2,3]triazol-5-amine (70 mg, 0.38 mmol), TEA (476 mg, 4.72 mmol) in THF (10 mL) was added triphosgene (112 mg, 0.38 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (60 mg, Y: 74.0 %) as a brown solid. ESI-MS (M+H) +:507.3. Step 8: Preparation of (S)-N-(2,6-dimethyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01470] To a solution of tert-butyl (S)-4-(1-((2,6-dimethyl-2H-benzo[d][1,2,3]triazol- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (60 mg, 0.12 mmol) in EA (3 mL) was added 4M HCl/EA (3 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (16 mg, 29.9 %) as a white solid. ESI-MS (M+H)+:407.2.1H NMR (400 MHz, DMSO-d6) δ 11.94 (s, 1H), 8.58 (s, 1H), 8.26 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 7.74 (s, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.41 (s, 3H), 4.02 – 3.98 (m, 2H), 3.64 – 3.59 (m, 2H), 3.13 (t, J = 8.5 Hz, 2H), 3.00 (d, J = 11.2 Hz, 1H), 2.90 – 2.77 (m, 3H), 2.60 – 2.54 (m, 1H), 2.52 (s, 3H), 1.06 (d, J = 6.3 Hz, 3H).
Example 498 – Preparation of (S)-N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000731_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01471] To a solution of 6-fluoro-2,7-dimethyl-2H-indazol-5-amine (81 mg, 0.45 mmol) and TEA (457 mg, 4.52 mmol) in THF (12 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (120 mg, 0.37 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (150 mg, 76.02 %) as a white solid. ESI-MS (M+H) +:524.4. Step 2: Preparation of (S)-N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01472] To a mixture of tert-butyl (S)-4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (130 mg, 0.25 mmol) in EA (2 mL) was added HCl/EA (6 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (40 mg, Y: 38.04 %) as a white solid. ESI-MS (M+H) +:424.2.1H NMR (400 MHz, DMSO-d6) δ 11.99 (d, J = 2.9 Hz, 1H), 8.27 (d, J = 7.2 Hz, 2H), 8.21 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 6.55 (d, J = 6.1 Hz, 1H), 4.12 (s, 3H), 4.00 (t, J = 8.6 Hz, 2H), 3.69 – 3.65 (m, 2H), 3.15 – 3.12 (m, 2H), 3.09 – 3.00 (m, 2H), 3.00 – 2.91 (m, 2H), 2.73 – 2.66 (m, 1H), 2.45 – 2.41 (m, 3H), 1.13 (d, J = 6.3 Hz, 3H). Example 499 – Preparation of (S)-N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin- 6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000732_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((8-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01473] To a solution of 8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-amine (112 mg, 0.57 mmol) in THF (5 mL) were added TEA (572 mg, 5.66 mmol) and triphosgene (168 mg, 0.57 mmol) at 0 oC. After stirred at 0 oC for 5 min, tert-butyl (S)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg 0.47 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (15 mL) and extracted with DCM (15 mL*3). The organic layer was concentrated in vacuo to provide the title product (124 mg, 48.6 %) as a yellow solid. ESI-MS (M+H) +: 542.4.1H NMR (400 MHz, DMSO-d6) δ 11.82 (s, 1H), 9.07 (s, 1H), 7.95 (d, J = 6.1 Hz, 1H), 7.84 (s, 1H), 7.49 (s, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.00 (t, J = 8.6 Hz, 2H), 3.77 (d, 1H), 3.20 – 3.12 (m, 4H), 3.10 – 3.05 (m, 4H), 2.35 (s, 3H), 1.43 – 1.42 (m, 9H), 1.19 (d, J = 1.4 Hz, 3H). Step 2: (S)-N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01474] A solution of tert-butyl (S)-4-(1-((8-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (124 mg, 0.23 mmol) in 4 M HCl / EA (5 mL) was stirred at r.t for 2 h. The reaction mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % FA in H2O / CH3CN) to afford the title product (19 mg, 16.4 %) as a yellow solid. ESI-MS (M+H) +:442.0.1H NMR (400 MHz, DMSO-d6) δ 11.84 (s, 1H), 9.07 (s, 1H), 8.22 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 7.84 (s, 1H), 7.36 – 7.35 (m, 2H), 6.55 (d, J = 6.1 Hz, 1H), 3.99 (t, J = 8.5 Hz, 2H), 3.64 – 3.63 (m, 1H), 3.15 (t, J = 8.4 Hz, 2H), 3.01 (d, J = 11.6 Hz, 1H), 2.94 – 2.78 (m, 4H), 2.58 – 2.56 (m, 1H), 2.35 (s, 3H), 1.06 (d, J = 6.2 Hz, 3H). Example 500 – Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6- yl)-4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000733_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((8-(difluoromethyl)-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01475] To a solution of 8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-amine (107 mg, 0.54 mmol) in THF (5 mL) were added TEA (548 mg, 5.42 mmol) and triphosgene (161 mg, 0.54 mmol) at 0oC. After stirred at 0oC for 5 min, tert-butyl (2S,6R)-4-(2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (15 mL) and extracted with DCM (15 mL*3). The organic layer was concentrated in vacuo and triturated with MeOH (5 mL) to provide the title product (48 mg, 19.1 %) as a white solid. ESI-MS (M+H) +: 556.2.1H NMR (400 MHz, DMSO-d6) δ 11.80 (s, 1H), 9.08 (s, 1H), 7.98 (d, J = 6.1 Hz, 1H), 7.84 (s, 1H), 7.50 – 7.40 (m, 2H), 6.58 (d, J = 6.2 Hz, 1H), 4.15 – 4.08 (m, 2H), 4.02 (t, J = 8.6 Hz, 2H), 3.60 (d, J = 12.5 Hz, 2H), 3.18 (t, J = 8.0 Hz, 2H), 3.00 (dd, J = 12.5, 4.3 Hz, 2H), 2.36 (d, J = 11.2 Hz, 3H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of N-(8-(difluoromethyl)-2-methylimidazo[1,2-a]pyridin-6-yl)-4- ((3S,5R)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01476] A solution of tert-butyl (2S,6R)-4-(1-((8-(difluoromethyl)-2- methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2,6-dimethylpiperazine-1-carboxylate (48 mg, 0.086 mmol) in 4M HCl / EA (5 mL) was stirred at r.t for 2 h. The precipitate was filtered and lyophilized to afford the title product (35 mg, 89.4 %) as a white solid. ESI-MS (M+H) +:456.2.1H NMR (400 MHz, MeOD-d4) δ 9.41 (s, 1H), 8.31 (s, 1H), 8.10 (s, 1H), 7.90 (s, 1H), 7.27 – 7.20 (m, 2H), 4.30 – 4.28 (m, 4H), 3.56 – 3.52 (m, 3H), 3.33 – 3.31 (m, 2H), 3.14 – 3.11 (m, 1H), 2.59 (s, 3H), 1.42 (d, J = 6.5 Hz, 6H). Example 501 – Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-((3S,5R)- 3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate
Figure imgf000734_0001
Step 1: Preparation of 6-bromo-2,7-dimethylimidazo[1,2-a]pyridine. [01477] To a mixture of 5-bromo-4-methylpyridin-2-amine (20 g, 107.53 mmol) in IPA (200 mL) were added 1-bromo-2,2-dimethoxypropane (21.53 g, 118.28 mmol) and PPTS (63.61 g, 129.04 mmol). [01478] The mixture was stirred at 85oC for 16 h. The mixture was diluted with water (200 mL), adjusted pH to 10 with sat.NaOH and extracted with EA (200 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 5: 1) to get title product (11 g, Y: 45.87%) as a white solid. ESI-MS (M+H) +: 227.0. Step 2: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1-diphenylmethanimine. [01479] To a mixture of 6-bromo-2,7-dimethylimidazo[1,2-a]pyridine (11 g, 49.11 mmol), diphenylmethanimine (13.33 g, 73.67 mmol) and BINAP (6.12 g, 9.82 mmol) in 1,4- dioxane (110 mL) were added Cs2CO3 (32.02 g, 98.22 mmol) and Pd(OAc)2 (1.11 g, 4.91 mmol). The mixture was stirred at 110 oC for 16 h under N2. The mixture was diluted with H2O (100 mL) and extracted with EA (100 mL x 3). The organic phase was washed with brine (100 mL*3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (4 g, 25.06%) as a brown solid. ESI-MS (M+H) +:326.4. Step 3: Preparation of 2,7-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride. [01480] A mixture of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-1,1- diphenylmethanimine (4 g, 12.31 mmol) in 4M HCl/EA (50 mL) was stirred at r.t for 2 h. The precipitate was filtrated, washed with EA and dried in vacuo to give title product (700 mg, 90.49%) as a yellow solid. ESI-MS (M+H+): 162.2. Step 4: Preparation of tert-butyl (2S,6R)-4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01481] To a mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 2,7-dimethylimidazo[1,2- a]pyridin-6-amine hydrochloride (106.38 mg, 0.54 mmol) in THF (10 mL) were added TEA (136.35 mg, 1.35 mmol) and triphosgene (267.30 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (20 mL) and extracted with EA (20 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1 to 1/1) to afford title product (80 mg, 34.25%) as a brown solid. ESI-MS (M+H) +: 520.3. Step 5: Preparation of N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-((3S,5R)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01482] A mixture of tert-butyl (2S,6R)-4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (80 mg, 0.15 mmol) in 4M HCl / EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in water / CH3CN) to give title product (3.75 mg, 4.69%) as a brown solid. ESI-MS (M+H) +:420.2.1H NMR (400 MHz, MeOD-d4) δ 9.48 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.86 (s, 1H), 7.68 (s, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.18 – 4.13 (m, 2H), 3.95 – 3.90 (m, 2H), 3.55 – 3.49 (m, 2H), 3.28 – 3.22 (m, 2H), 2.98 – 2.92 (m, 2H), 2.66 (s, 3H), 2.51 (s, 3H), 1.40 (d, J = 6.6 Hz, 6H). Example 502 – Preparation of (R)-N-(2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000736_0001
Step 1: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01483] A mixture of 2-methyl-2H-pyrazolo[3,4-c]pyridin-5-amine hydrochloride (104 mg, 0.566 mmol), triphosgene (168 mg, 0.566 mmol) and TEA (572 mg, 5.66 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (150 mg, 0.472 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo. The solid was trirurated with MeOH (3 mL*2) to afford title product (70 mg, 30.2 %) as a white solid. ESI-MS (M+H) +: 493.0.1H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 8.94 (s, 1H), 8.38 (s, 1H), 8.19 – 8.16 (m, 1H), 7.97 – 7.94 (m, 1H), 6.56 – 6.49 (m, 1H), 4.22 (s, 3H), 4.04 – 3.98 (m, 2H), 3.82 – 3.55 (m, 4H), 3.19 – 3.07 (m, 4H), 2.96 – 2.88 (m, 1H), 1.42 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (R)-N-(2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01484] A mixture of tert-butyl (R)-2-methyl-4-(1-((2-methyl-2H-pyrazolo[3,4- c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (50 mg, 0.102 mmol) in 4M HCl /EA (4 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the solid was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (20 mg, 44.9 %) as a white solid. ESI-MS (M+H) +: 393.0. 1H NMR (400 MHz, DMSO-d6) δ 12.09 (s, 1H), 8.94 (s, 1H), 8.38 (s, 1H), 8.25 (s, 1H), 8.17 (s, 1H), 7.93 (d, J = 6.0 Hz, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.22 (s, 3H), 4.00 (t, J = 8.5 Hz, 2H), 3.59 (d, J = 11.5 Hz, 2H), 3.12 (t, J = 8.6 Hz, 2H), 2.97 (d, J = 10.9 Hz, 1H), 2.89 – 2.76 (m, 3H), 2.56 – 2.52 (m, 1H), 1.04 (d, J = 6.3 Hz, 3H). Example 503 – Preparation of (S)-N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000737_0001
Step 1: Preparation of tert-butyl (S)-2-methyl-4-(1-((2-methylimidazo[1,2-a]pyrimidin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01485] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol), 2-methylimidazo[1,2-a]pyrimidin-6- amine (69.81 mg, 0.47 mmol) and TEA (142.41 mg, 1.41 mmol) in THF (5 mL) was added triphosgene (278.24 mg, 0.94 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (60 mg, 25.95%) as a brown solid. ESI-MS (M+H) +: 493.2. Step 2: Preparation of (S)-N-(2-methylimidazo[1,2-a]pyrimidin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01486] A mixture of tert-butyl (S)-2-methyl-4-(1-((2-methylimidazo[1,2-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (60 mg,0.12 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% TFA in water / CH3CN) to give title product (5.66 mg, 9.32%) as a brown solid. ESI-MS (M+H) +:393.2.1H NMR (400 MHz, MeOD-d4) δ 9.65 (d, J = 2.4 Hz, 1H), 9.02 (d, J = 2.4 Hz, 1H), 8.02 (d, J = 6.2 Hz, 1H), 7.91 (s, 1H), 6.72 (d, J = 6.3 Hz, 1H), 4.23 – 4.17 (m, 2H), 3.97 – 3.89 (m, 2H), 3.55 – 3.34 (m, 4H), 3.30 – 3.27 (m, 2H), 3.12 (dd, J = 13.8, 10.5 Hz, 1H), 2.56 (s, 3H), 1.41 (d, J = 6.6 Hz, 3H). Example 504 – Preparation of (S)-N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000738_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01487] To a solution of 2,7-dimethylimidazo[1,2-a]pyridin-6-amine (49 mg, 0.30 mmol) and TEA (305 mg, 3.02 mmol) in THF (15 mL) was added triphosgene (89 mg, 0.38 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (80 mg, 0.25 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and concentrated in vacuo to give the compound (50 mg, 40 %) as a white solid. ESI- MS (M+H) +:506.2.1H NMR (400 MHz, DMSO-d6) δ 11.69 (s, 1H), 9.09 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.65 (s, 1H), 7.34 (s, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.00 (t, J = 7.5 Hz, 2H), 3.78 (d, J = 13.2 Hz, 2H), 3.66 (d, J = 12.9 Hz, 1H), 3.59 (d, J = 13.0 Hz, 2H), 3.17 (d, J = 5.2 Hz, 4H), 2.33 (s, 6H), 1.42 (s, 9H). Step 2: Preparation of (S)-N-(2,7-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01488] To a mixture of tert-butyl (S)-4-(1-((2,7-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.05% NH3.H2O in H2O / ACN) to give title product (8.63 mg, 27 %) as a white solid. ESI-MS (M+H) +: 406.2.1H NMR (400 MHz, DMSO-d6) δ 11.70 (s, 1H), 9.06 (s, 1H), 7.87 (d, J = 6.1 Hz, 1H), 7.61 (s, 1H), 7.30 (s, 1H), 6.51 (d, J = 6.2 Hz, 1H), 3.98 (t, J = 8.6 Hz, 2H), 3.58 (d, J = 12.2 Hz, 2H), 3.13 (t, J = 8.6 Hz, 2H), 2.91 (d, J = 11.2 Hz, 1H), 2.85 – 2.68 (m, 3H), 2.48 – 2.42 (m, 1H), 2.39 (s, 3H), 2.28 (s, 3H), 1.00 (d, J = 6.3 Hz, 3H). Example 505 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2- methyl-2H-benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000739_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01489] A mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (80 mg, 0.24 mmol), 6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-amine (55 mg, 0.29 mmol), triphosgene (86 mg, 0.29 mmol) and TEA (292 mg, 2.89 mmol) in THF (8 mL) was stirred at 0 oC for 15 min. The mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (40 mg, 30.30 %) as a yellow solid. ESI-MS (M+H) +: 551.3. Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01490] A mixture of tert-butyl (2S,6R)-4-(1-((6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (30 mg, 0.05 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (16.57 mg, yield: 73.64 %) as a gray solid. ESI-MS (M+H) +: 451.3.1H NMR (400 MHz, DMSO-d6+D2O) δ 8.61 (s, 1H), 8.31 (s, 1H), 7.92 (d, J = 5.9 Hz, 1H), 7.27 (s, 1H), 6.61 (d, J = 5.9 Hz, 1H), 4.37 (s, 3H), 4.23 – 4.17 (m, 2H), 4.03 (t, J = 8.4 Hz, 2H), 3.75 (s, 2H), 3.22 – 3.13 (m, 4H), 2.75 (t, J = 12.2 Hz, 2H), 1.55 (t, J = 6.9 Hz, 3H), 1.20 (d, J = 6.4 Hz, 6H). Example 506 – Preparation of (R)-N-(6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000740_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01491] A mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (80 mg, 0.25 mmol), 6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-amine (58 mg, 0.30 mmol), triphosgene (89 mg, 0.30 mmol) and TEA (305 mg, 3.02 mmol) in THF (8 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (40 mg, 29.85 %) as a yellow solid. ESI-MS (M+H) +: 537.3. Step 2: Preparation of (R)-N-(6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01492] A mixture of tert-butyl (R)-4-(1-((6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (30 mg, 0.05 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (4.71 mg, yield: 21.60 %) as a white solid. ESI-MS (M+H) +: 437.3.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 8.63 (s, 1H), 8.16 (s, 1H), 7.88 (d, J = 6.1 Hz, 1H), 7.28 (s, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.37 (s, 3H), 4.21 (t, J = 6.9 Hz, 2H), 4.02 (t, J = 8.6 Hz, 2H), 3.66 (d, J = 12.0 Hz, 2H), 3.15 (d, J = 8.8 Hz, 3H), 3.03 – 2.91 (m, 3H), 2.71 (d, J = 11.7 Hz, 1H), 1.54 (t, J = 6.9 Hz, 3H), 1.13 (d, J = 6.4 Hz, 3H). Example 507 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000741_0001
Step 1: Preparation of 4-bromo-5-ethoxy-2-nitroaniline. [01493] A mixture of 5-ethoxy-2-nitroaniline (24 g, 138.87 mmol) and NBS (23.5 g, 138.87 mmol) in ACN (200 mL) was stirred at 70 oC for 16 h. The mixture was diluted with water (200 mL), extracted with EA (200 mL×3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo to give title product (33 g, yield: 96.24 %) as a yellow solid. ESI-MS (M+H) +: 261.0.1H NMR (400 MHz, CDCl3) δ 8.35 (s, 1H), 6.14 (s, 1H), 4.10 (q, J = 7.0 Hz, 2H), 1.52 (t, J = 7.0 Hz, 3H). Step 2: Preparation of 4-bromo-5-ethoxybenzene-1,2-diamine. [01494] A mixture of 4-bromo-5-ethoxy-2-nitroaniline (32 g, 123.08 mmol), NH4Cl (49.8 g, 923.1 mmol) and Fe (68 g, 1230.76 mmol) in EtOH / H2O (500 mL /100 mL) was stirred at 90 oC for 4 h. The precipitate was filtered and the filtrate was concentarted in vacuo. The residue was diluted with water (500 mL), extracted with EA (500 mL×3). The organic layer was washed with brine (500 mL), dried with Na2SO4 and concentrated in vacuo to give title product (24 g, 84.41 %) as a black solid. ESI-MS (M+H) +: 233.0.1H NMR (400 MHz, CDCl3) δ 6.88 (s, 1H), 6.35 (s, 1H), 3.98 (q, J = 6.9 Hz, 2H), 1.41 (t, J = 7.0 Hz, 3H). Step 3: Preparation of 5-bromo-6-ethoxy-2H-benzo[d][1,2,3]triazole. [01495] A mixture of 4-bromo-5-ethoxybenzene-1,2-diamine (23 g, 100 mmol), NaNO2 (34.5 g, 500 mmol) , in AcOH / H2O (100 mL / 400 mL) was stirred at RT for 20 min. The mixture was diluted with water (200 mL), extracted with EA (200 mL×3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo to give title product (20 g, yield: 82.98 %) as a brown solid. ESI-MS (M+H) +: 244.0. Step 4: Preparation of 5-bromo-6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazole. [01496] A mixture of 5-bromo-6-ethoxy-2H-benzo[d][1,2,3]triazole (18 g, 74.69 mmol), CH3I (21.21 g, 149.38 mmol) and EtONa (9.1 g, 134.44 mmol) in EtOH (200 mL) was stirred at 70 oC for 16 h. The mixture was diluted with water (200 mL), extracted with EA (200 mL×3). The organic layer was washed with brine (200 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 23 %) to give title product (4.8 g, yield: 25.20 %) as a white solid. ESI-MS (M+H) +: 258.1.1H NMR (400 MHz, CDCl3) δ 8.08 (s, 1H), 7.10 (s, 1H), 4.44 (s, 3H), 4.15 (q, J = 7.0 Hz, 2H), 1.54 (t, J = 7.0 Hz, 3H). Step 5: Preparation of N-(6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine. [01497] A mixture of 5-bromo-6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazole (4.7 g, 18.43 mmol), diphenylmethanimine (5 g, 27.65 mmol), Pd2(dba)3 (1.68 g, 1.84 mmol), Xantphos (2.13g, 3.68 mmol) and Cs2CO3 (12.02 g, 36.86 mmol) in 1,4-dioxane (50 mL) was stirred at 110 oC for 5 h under N2. The mixture was diluted with water (100 mL), extracted with EA (100 mL×3). The organic layer was washed with brine (100 mL), dried with Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE= 70 %) to give title product (1.7 g, yield: 25.91 %) as a yellow oil. ESI-MS (M+H) +: 357.0.1H NMR (400 MHz, CDCl3) δ 7.79 (d, J = 7.4 Hz, 2H), 7.48 (d, J = 7.2 Hz, 1H), 7.42 (t, J = 7.5 Hz, 2H), 7.22 – 7.14 (m, 5H), 6.97 (s, 1H), 6.91 (s, 1H), 4.36 (s, 3H), 3.97 (q, J = 7.0 Hz, 2H), 1.38 (t, J = 7.0 Hz, 3H). Step 6: Preparation of 6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-amine hydrochloride. [01498] A mixture of N-(6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-1,1- diphenylmethanimine (1.6 g, 4.49 mmol) in HCl / EA (4M, 20 mL) was stirred at RT for 16 h. The precipitate was filtered and dried in vacuo to give title product (700 mg, yield: 68.38 %) as a white solid. ESI-MS (M+H) +: 193.2.1H NMR (400 MHz, DMSO-d6) δ 7.43 (s, 1H), 7.29 (s, 1H), 4.36 (s, 3H), 4.17 (q, J = 7.0 Hz, 2H), 1.42 (t, J = 7.0 Hz, 3H). Step 7: Preparation of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01499] A mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (120 mg, 0.36 mmol), 6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-amine hydrochloride (83 mg, 0.43 mmol), triphosgene (129 mg, 0.43 mmol) and TEA (438 mg, 4.34 mmol) in THF (12 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (50 mg, 25.25 %) as a yellow solid. ESI- MS (M+H) +: 551.2. Step 8: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01500] A mixture of tert-butyl 4-(1-((6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (40 mg, 0.07 mmol) in HCl / EA (4M, 2 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (17.63 mg, yield: 55.96 %) as a white solid. ESI-MS (M+H) +: 451.2.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 8.63 (s, 1H), 8.31 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 7.27 (s, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.37 (s, 3H), 4.21 (t, J = 6.9 Hz, 2H), 4.04 – 3.99 (m, 2H), 3.23 – 3.19 (m, 2H), 3.12 (t, J = 8.5 Hz, 2H), 3.04 (s, 2H), 2.95 – 2.91 (m, 2H), 1.54 (t, J = 6.9 Hz, 3H), 1.15 (s, 6H). Example 508 – Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000744_0001
Step 1: Preparation of tert-butyl 7-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [01501] A mixture of 2,8-dimethylimidazo[1,2-a]pyridin-6-amine hydrochloride (143 mg, 0.727 mmol), triphosgene (216 mg, 0.727 mmol) and TEA (734 mg, 7.273 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.606 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo to afford title product (90 mg, crude) as a yellow solid. ESI-MS (M+H) +: 518.0. Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01502] A mixture of tert-butyl 7-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (80 mg, 0.155 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the solid was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (39 mg, 47.5 %) as a white solid. ESI-MS (M+H) +: 418.2.1 H NMR (400 MHz, DMSO-d6) δ 12.06 (s, 1H), 9.45 – 9.21 (m, 3H), 8.16 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 7.75 (s, 1H), 6.66 (d, J = 6.2 Hz, 1H), 4.02 (t, J = 8.5 Hz, 2H), 3.63 – 3.56 (m, 2H), 3.46 – 3.42 (m, 2H), 3.40 – 3.33 (m, 2H), 3.15 (t, J = 8.4 Hz, 2H), 2.57 (s, 3H), 2.48 (s, 3H), 1.09 – 1.02 (m, 2H), 0.97 – 0.89 (m, 2H). Example 509 – Preparation of (S)-N-(2,7-dimethyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000745_0001
yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01503] To a solution of 2,7-dimethyl-2H-indazol-5-amine (60 mg, 0.37 mmol) in THF (10 mL) were added and TEA (376 mg, 3.72 mmol), triphosgene (110mg, 0.37 mmol) and stirred at 0oC for 5 min. Then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added slowly at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (5 mL) to give the compound (100 mg, 63 %) as a white solid. ESI-MS (M+H) +: 506.2.1H NMR (400 MHz, CDCl3) δ 11.59 (s, 1H), 7.95 (dd, J = 12.3, 3.7 Hz, 2H), 7.79 (s, 1H), 7.04 (s, 1H), 6.34 (d, J = 6.0 Hz, 1H), 4.41 – 4.29 (m, 1H), 4.23 – 4.13 (m, 5H), 4.01 – 3.90 (m, 1H), 3.59 – 3.48 (m, 1H), 3.46 – 3.37 (m, 1H), 3.30 – 3.18 (m, 1H), 3.12 – 3.03 (m, 3H), 2.98 – 2.89 (m, 1H), 2.62 (s, 3H), 1.49 (s, 9H), 1.31 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(2,7-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01504] To a mixture of tert-butyl (S)-4-(1-((2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.16 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure to give title product (55.87 mg, 79%) as a white solid. ESI-MS (M+H) +:406.0.1H NMR (400 MHz, DMSO-d6) δ 9.74 (s, 2H), 8.26 (s, 1H), 7.79 (dd, J = 37.4 Hz, 2H), 7.13 (s, 1H), 6.84 – 6.83 (m, 1H), 4.40 – 4.10 (m, 6H), 4.09 – 3.91 (m, 3H), 3.42 – 3.31 (m, 4H), 3.15 – 3.08 (m, 1H), 2.49 (s, 3H), 1.32 (d, J = 6.0 Hz, 3H). Example 510 – Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-((3S,5R)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000746_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate. [01505] To a solution of 2,7-dimethyl-2H-indazol-5-amine (60 mg, 0.36 mmol) in THF (10 mL) were added and TEA (364 mg, 3.60 mmol), triphosgene (107 mg, 0.36 mmol) and stirred at 0oC for 5 min. Then tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) was added slowly at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (70 mg, 40 %) as a white solid. ESI-MS (M+H) +: 520.0.1H NMR (400 MHz, CDCl3) δ 11.59 (s, 1H), 8.00 – 7.93 (m, 2H), 7.79 (s, 1H), 7.04 (s, 1H), 6.41 – 6.36 (m, 1H), 4.31 – 4.24 (m, 2H), 4.22 – 4.16 (m, 5H), 3.46 – 3.39 (m, 2H), 3.17 – 3.10 (m, 2H), 3.04 – 2.96 (m, 2H), 2.62 (s, 3H), 1.50 (s, 9H), 1.37 (d, J = 6.8 Hz, 6H). Step 2: Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-((3S,5R)-3,5-dimethylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01506] To a mixture of tert-butyl (2S,6R)-4-(1-((2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (50 mg, 0.096 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (30.29 mg, 67%) as a white solid. ESI-MS (M+H) +: 420.3.1H NMR (400 MHz, DMSO-d6) δ 11.71 (s, 1H), 8.24 (s, 1H), 8.18 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.84 (s, 1H), 6.97 (s, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 3.99 – 3.94 (m, 2H), 3.63 – 3.61 (m, 2H), 3.14 – 3.09 (m, 2H), 2.90 – 2.83 (m, 2H), 2.49 – 2.40 (m, 5H), 1.03 (d, J = 6.3 Hz, 6H). Example 511 – Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(3,3- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000747_0001
dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [01507] To a solution of 2,7-dimethyl-2H-indazol-5-amine (47 mg, 0.29 mmol) and TEA (292 mg, 2.89 mmol) in THF (10 mL) was added triphosgene (86 mg, 0.29 mmol) at 0oC, after 10 min, tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (80 mg, 0.24 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and triturated with MeOH (5 mL) to give the compound (100 mg, 80%) as a white solid. ESI-MS (M+H) +:520.4.1H NMR (400 MHz, DMSO-d6) δ 11.79 (s, 1H), 8.18 (s, 1H), 7.87 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 1.4 Hz, 1H), 6.97 (s, 1H), 6.40 (d, J = 6.3 Hz, 1H), 4.13 (s, 3H), 3.94 (t, J = 8.6 Hz, 2H), 3.72 – 3.67 (m, 2H), 3.58 – 3.54 (m, 2H), 3.53 (s, 2H), 3.29 – 3.25 (m, 2H), 2.48 (s, 3H), 1.43 (s, 9H), 1.38 (s, 6H). Step 2: Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(3,3-dimethylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01508] To a mixture of tert-butyl 4-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in EA (2 mL) was added 4M HCl/EA (6 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep- HPLC (0.05% FA in H2O / ACN) to give title product (38.90 mg, 56 %) as a white solid. ESI-MS (M+H) +:420.2.1H NMR (400 MHz, DMSO-d6) δ 11.67 (s, 1H), 8.26 (s, 1H), 8.18 (s, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 1.4 Hz, 1H), 6.97 (s, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 4.01 – 3.95 (m, 2H), 3.26 – 3.22 (m, 2H), 3.13 – 3.07 (m, 4H), 2.99 – 2.95 (m, 2H), 2.48 (s, 3H), 1.18 (s, 6H). Example 512 – Preparation of N-(2,7-dimethyl-2H-indazol-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000748_0001
Step 1: Preparation of tert-butyl 7-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate. [01509] To a solution of 2,7-dimethyl-2H-indazol-5-amine (59 mg, 0.36 mmol) and TEA (368 mg, 3.64 mmol) in THF (10 mL) was added triphosgene (108 mg, 0.36 mmol) at 0oC, after 10 min, tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and concentrated in vacuo to give the compound (50 mg, 32 %) as a white solid. ESI- MS (M+H) +:518.3.1H NMR (400 MHz, DMSO-d6) δ 11.67 (s, 1H), 8.18 (s, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.84 (s, 1H), 6.97 (s, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 3.96 (t, J = 8.6 Hz, 2H), 3.58 – 3.55 (m, 2H), 3.29 – 3.27 (m, 2H), 3.12 – 3.06 (m, 4H), 2.48 (s, 3H), 1.42 (s, 9H), 0.94 (d, J = 4.5 Hz, 2H), 0.86 (d, J = 5.0 Hz, 2H). Step 2: Preparation of (N-(2,7-dimethyl-2H-indazol-5-yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01510] To a mixture of tert-butyl 7-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (40 mg, 0.08 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep- HPLC (0.05% FA in H2O / ACN) to give title product (29.01 mg, 78%) as a white solid. ESI- MS (M+H) +:418.2.1H NMR (400 MHz, DMSO-d6) δ 11.70 (s, 1H), 8.20 (s, 1H), 8.18 (s, 1H), 7.91 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 1.4 Hz, 1H), 6.97 (s, 1H), 6.48 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 3.95 (t, J = 8.6 Hz, 2H), 3.24 – 3.21 (m, 2H), 3.10 (s, 2H), 3.08 – 3.03 (m, 2H), 2.89 – 2.85 (m, 2H), 2.48 (s, 3H), 0.51 (t, J = 10.0 Hz, 4H). Example 513 – Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000749_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01511] To a mixture of 2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidine-6-carboxylic acid (87 mg, 0.45 mmol) in toluene (5 mL) were added TEA (122 mg, 1.20 mmol) and DPPA (232 mg, 0.84 mmol). The mixture was stirred at r.t for 1 h and warmed up to 90oC and stirred for 1 h. Tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) was added to the mixture and stirred at 110 oC for 16 h. The mixture was diluted with water (10 mL) and the precipitate was filtered to give the title compound (40 mg, Y: 25.5 %) as a brown solid. ESI-MS (M+H) +:522.4. Step 2: Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01512] To a solution of tert-butyl (2R,6S)-4-(1-((2,5-dimethyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (24 mg, 66.9 %) as a white solid. ESI-MS (M+H)+:422.3. 1H NMR (400 MHz, MeOD-d4) δ 9.64 (s, 1H), 8.51 – 8.41 (m, 1H), 7.98 (d, J = 5.7 Hz, 1H), 6.60 (d, J = 6.0 Hz, 1H), 4.11 (t, J = 8.3 Hz, 2H), 3.87 – 3.81 (m, 2H), 3.41 – 3.35 (m, 2H), 3.19 (t, J = 8.4 Hz, 2H), 2.84 – 2.77 (m, 5H), 2.52 (s, 3H), 1.34 (d, J = 6.5 Hz, 6H). Example 514 – Preparation of N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000750_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01513] To a mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 2,8-dimethyl- [1,2,4]triazolo[1,5-a]pyrazin-6-amine (59 mg, 0.36 mmol) and TEA (455 mg, 4.50 mmol) in THF (12 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 6) to give title product (70 mg, Y: 44.7%) as a yellow solid. ESI-MS (M+H) +: 522.4. Step 2: Preparation of N-(2,8-dimethyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-((3R,5S)-3,5- dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01514] A mixture of tert-butyl (2R,6S)-4-(1-((2,8-dimethyl-[1,2,4]triazolo[1,5- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (60 mg, 0.16 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (23.96 mg, Y: 49.4 %) as a white solid. ESI-MS (M+H) +: 422.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 8.68 (s, 1H), 8.29 (s, 1H), 7.62 (d, J = 5.9 Hz, 1H), 6.30 (d, J = 6.1 Hz, 1H), 3.76 (t, J = 8.0 Hz, 2H), 3.63 (d, J = 12.4 Hz, 2H), 3.31 – 3.19 (m, 2H), 2.86 (t, J = 8.0 Hz, 2H), 2.73 (t, J = 12.5 Hz, 2H), 2.53 (s, 3H), 2.32 (s, 3H), 1.22 (d, J = 6.5 Hz, 6H). Example 515 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(5-methoxy-2- methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000751_0002
Compound 515 Step 1: Preparation of N-(5-methoxy-2-methyl-[1,2,4]triazolo a]pyrimidin-6-yl)-1,1-
Figure imgf000751_0001
diphenylmethanimine. [01515] To a mixture of 6-bromo-5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidine (5.0 g, 20.58 mmol) in 1,4-dioxane (50 mL) were added diphenylmethanimine (5.6 g, 30.86 mmol), BINAP (2.6 g, 4.12 mmol), Pd2(dba)3 (1.9 g, 2.06 mmol) and Cs2CO3 (13.4 g, 41.15 mmol). The mixture was stirred at 110oC for 16 h under nitrogen atmosphere. The mixture was diluted with water (100 mL) and extracted with EA (100 mL*3), the organic layer was washed with brine (200 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was purified by column chromatography (PE: EA= 1: 4) to get title product (400 mg, Y: 5.7%) as a yellow solid. ESI-MS (M+H)+:343.1. Step 2: Preparation of 5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-amine hydrochloride. [01516] To a mixture of N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)- 1,1-diphenylmethanimine (400 mg, 1.17 mmol) in EA (5 mL) was added 4 M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered and diluted with EA (5 mL). The mixture was stirred at r.t for 2 h and the precipitate was filtered to get title product (170 mg, Y: 67.3%) as a white solid. ESI-MS (M+H)+:180.1. Step 3: Preparation of tert-butyl (2R,6S)-4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01517] To a mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (50 mg, 0.15 mmol), 5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-amine HCl salt (39 mg, 0.18 mmol), TEA (228 mg, 2.26 mmol) in THF (5 mL) was added and triphosgene (54 mg, 0.18 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered, triturated with MeOH (5mL) to get title product (40 mg, Y: 50.0 %) as a white solid. ESI-MS (M+H) +:538.4. Step 4: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01518] To a solution of tert-butyl (2R,6S)-4-(1-((5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2,6-dimethylpiperazine-1-carboxylate (30 mg, 0.06 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (19 mg, 61.7 %) as a white solid. ESI-MS (M+H)+:438.3. 1H NMR (400 MHz, MeOD-d4) δ 9.51 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.60 (d, J = 6.1 Hz, 1H), 4.26 (s, 3H), 4.12 – 4.07 (m, 2H), 3.93 – 3.88 (m, 2H), 3.55 – 3.48 (m, 2H), 3.19 (t, J = 8.5 Hz, 2H), 2.95 – 2.88 (m, 2H), 2.48 (s, 3H), 1.40 (d, J = 6.6 Hz, 6H).
Example 516 – Preparation of (S)-N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000753_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01519] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 8-methoxy-2-methylimidazo[1,2- a]pyrazin-6-amine hydrochloride (82 mg, 0.38 mmol), TEA (476 mg, 4.72 mmol) in THF (15 mL) was added triphosgene (112 mg, 0.38 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (30 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (40 mg, Y: 24.7 %) as a yellow solid. ESI-MS (M+H) +:523.4. Step 2: Preparation of (S)-N-(8-methoxy-2-methylimidazo[1,2-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01520] To a solution of tert-butyl (S)-4-(1-((8-methoxy-2-methylimidazo[1,2- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine- 1-carboxylate (30 mg, 0.06 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep- HPLC (0.03% TFA in water / ACN) to give title compound (20 mg, 64.9 %) as a yellow solid. ESI-MS (M+H)+:423.3. 1H NMR (400 MHz, MeOD-d4) δ 8.91 – 8.88 (m, 1H), 8.03 – 7.99 (m, 2H), 6.68 – 6.63 (m, 1H), 4.27 (s, 3H), 4.15 (t, J = 8.4 Hz, 2H), 3.88 – 3.82 (m, 2H), 3.55 – 3.47 (m, 2H), 3.29 – 3.28 (m, 2H), 3.22 (t, J = 8.4 Hz, 2H), 3.05 (dd, J = 13.8, 10.4 Hz, 1H), 2.52 (s, 3H), 1.42 – 1.38 (m, 3H). Example 517 – Preparation of N-(2,5-dimethyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4- ((3R,5S)-3,5-dimethylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000754_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01521] To a mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 8-methoxy-2- methylimidazo[1,2-a]pyrazin-6-amine hydrochloride (78 mg, 0.36 mmol), TEA (456 mg, 4.52 mmol) in THF (10 mL) was added triphosgene (107 mg, 0.36 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (40 mg, Y: 24.8 %) as a white solid. ESI-MS (M+H) +:537.4. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(8-methoxy-2- methylimidazo[1,2-a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01522] To a solution of tert-butyl (2R,6S)-4-(1-((8-methoxy-2-methylimidazo[1,2- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (30 mg, 0.06 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (19 mg, 61.7 %) as a yellow solid. ESI-MS (M+H)+:437.3. 1H NMR (400 MHz, MeOD-d4) δ 8.92 (s, 1H), 8.04 – 8.00 (m, 2H), 6.69 – 6.66 (m, 1H), 4.28 (s, 3H), 4.15 (t, J = 8.4 Hz, 2H), 3.96 – 3.90 (m, 2H), 3.56 – 3.49 (m, 2H), 3.23 (t, J = 8.4 Hz, 2H), 2.98 – 2.90 (m, 2H), 2.54 (s, 3H), 1.39 (d, J = 6.6 Hz, 6H). Example 518 – Preparation of (S)-N-(7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000755_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01523] To a solution of 7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridine-5- carboxylic acid (65 mg, 0.31 mmol) and TEA (95.34 mg, 0.94 mmol) in tol (10 mL) was added DPPA (129 mg, 0.47 mmol) at r.t, after 1 h, the mixture was warmed to 90 oC and stirred for 30 min, then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE/EA=3:7) to give title product (60 mg, Y: 36.56 %) as a white solid. ESI-MS (M+H) +:523.4. Step 2: Preparation of (S)-N-(7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01524] To a mixture of tert-butyl (S)-4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4- c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.10 mmol) in EA (2 mL) was added HCl/EA (3 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (10 mg, Y: 24.74 %) as a white solid. ESI-MS (M+H) +:423.2.1H NMR (400 MHz, DMSO-d6) δ 11.72 (s, 1H), 9.14 (s, 1H), 8.80 (s, 1H), 8.25 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 7.69 (s, 1H), 6.62 (d, J = 6.1 Hz, 1H), 4.14 (s, 3H), 4.05 – 3.99 (m, 5H), 3.81 – 3.77 (m, 2H), 3.42 – 3.35 (m, 2H), 3.22 – 3.12 (m, 4H), 3.03 – 2.95 (m, 1H), 1.27 (d, J = 6.5 Hz, 3H). Example 519 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000756_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01525] A mixture of 6-ethoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (159 mg, 0.72 mmol) in Tol (5 mL) were added TEA (182 mg, 1.81 mmol) and DPPA (199 mg, 0.72 mmol) . The mixture was stirred at 30 ℃ for 30 min and 60 ℃ for 30 min. Tert- butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (200 mg, 0.60 mmol) was added to the mixture and stirred at 90 ℃ for 16 h. The mixture was concentrated in vacuo and diluted with water (15 mL), extracted with DCM (15 mL*3). The organic layer was concentrated in vacuo to afford the title product (80 mg, 24.2 %) as a white solid. ESI-MS (M+H) +: 550.2.1H NMR (400 MHz, DMSO-d6) δ 12.27 (s, 1H), 8.27 (s, 1H), 8.25 (s, 1H), 7.89 (d, J = 6.0 Hz, 1H), 6.59 (d, J = 6.1 Hz, 1H), 6.16 (s, 1H), 4.16 – 4.09 (m, 4H), 4.02 (t, J = 8.6 Hz, 2H), 3.58 (d, J = 12.3 Hz, 2H), 3.18 (t, J = 8.5 Hz, 2H), 2.99 (dd, J = 12.4, 3.8 Hz, 2H), 2.30 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin- 5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01526] A solution of tert-butyl (2S,6R)-4-(1-((6-ethoxy-2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (80 mg, 0.15 mmol) in 4 M HCl / EA (5 mL) was stirred at r.t for 2h. The precipitate was filtered and lyophilized to afford the title product (55 mg, 84.6%) as a white solid. ESI-MS (M+H) +: 450.2.1H NMR (400 MHz, DMSO-d6) δ 12.19 (s, 1H), 9.69 (s, 1H), 9.24 (d, J = 9.9 Hz, 1H), 8.27 (d, J = 13.0 Hz, 2H), 7.88 (d, J = 6.0 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 6.19 (s, 1H), 4.12 (q, J = 6.9 Hz, 2H), 4.01 (t, J = 8.4 Hz, 2H), 3.84 (s, 2H), 3.32 (s, 2H), 3.17 (t, J = 8.4 Hz, 2H), 3.05 – 2.95 (m, 2H), 2.31 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H), 1.31 (d, J = 6.4 Hz, 6H). Example 520 – Preparation of N-(2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9- diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide.
Figure imgf000757_0001
Compound 520 Step 1: Preparation of tert-butyl 2-(1-((2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate. [01527] To a solution of tert-butyl 2-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6- oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (120 mg, 0.33 mmol) in THF (3 mL) was added DIEA (198 mg, 1.67 mmol), triphosgene (99 mg, 0.33 mmol) and 2- methylimidazo[1,2-a] pyridin-6-amine (74 mg, 0.5 mmol) at 0 °C. The reaction mixture was stirred at room temperature for 16 hours. The resulting mixture was diluted with H2O (80 mL), extracted with EtOAc (50 mL x 2). The combined organic layers were dried over anhydrous Na2SO4. After filtration, the filtrate was concentrated under vacuum and the residue was purified by C18 column chromatography eluted with (0.05% FA in water / ACN) to afford tert-butyl 2-(1-((2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (50 mg, yield: 28%) as a yellow solid. ESI-MS (M+1) +: 534.3. Step 2: Preparation of N-(2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. [01528] To a mixture of tert-butyl 2-(1-((2-methylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9- carboxylate (40 mg, 0.075 mmol) in DCM (1 mL) was added HCl/dioxane (1 mL, 6 mmol) dropwise at room temperature under nitrogen atmosphere. The reaction mixture was stirred at room temperature for 1 hour. The resulting mixture was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% NH4HCO3 in water / ACN) to afford N-(2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide (10 mg, yield: 30%) as a yellow solid. ESI-MS (M+1) +: 434.1.1H NMR (400 MHz, CD3OD) δ 8.85 (dd, J = 1.9, 0.8 Hz, 1H), 7.77 (d, J = 6.1 Hz, 1H), 7.51 (s, 1H), 7.37 (d, J = 9.5 Hz, 1H), 7.17 (dd, J = 9.5, 2.0 Hz, 1H), 6.16 (d, J = 6.2 Hz, 1H), 3.99 (dt, J = 9.9, 7.1 Hz, 2H), 3.76 – 3.60 (m, 5H), 3.53 (d, J = 10.7 Hz, 1H), 3.45 – 3.34 (m, 2H), 2.85 (dt, J = 10.1, 8.6 Hz, 4H), 2.39 – 2.35 (m, 3H), 2.22 (dd, J = 14.4, 9.8 Hz, 1H), 1.92 (dt, J = 13.0, 8.7 Hz, 1H). Example 521 – Preparation of (R)-N-(2-methylimidazo[1,2-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000758_0001
Step 1: Preparation of N-(2-methylimidazo[1,2-a]pyrazin-6-yl)-1,1-diphenylmethanimine. [01529] A mixture of 6-bromo-2-methylimidazo[1,2-a]pyrazine (5 g, 23.58 mmol) and diphenylmethanimine (4.7 g, 25.94 mmol) in dioxane (80 mL) were added BINAP (2.93 g, 4.72 mmol), Pd2(dba)3(2.16 g, 2.36 mmol) and Cs2CO3 (23 g, 70.75 mmol). The reaction solution was stirred at 110℃ for 16 h under N2. The reaction was concentrated in vacuo and purified by silica gel column chromatography (PE: EA=1:3) to give title product (5 g, Y: 67.8%) as a yellow solid. ESI-MS (M+H) +: 313.2. Step 2: Preparation of 2-methylimidazo[1,2-a]pyrazin-6-amine HCl salt. [01530] A mixture of N-(2-methylimidazo[1,2-a]pyrazin-6-yl)-1,1- diphenylmethanimine (4 g, 12.78 mmol) in EA (40 mL) and 4M HCl/EA (20 mL) was stirred at RT for 1h. The mixture diluted with EA (250 mL) stirred at rt for 2 h, the precipitate was filtered and dried in vacuo to give title product (2 g, crude) as a yellow solid. ESI-MS (M+H) +: 149.2. Step 3: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01531] To a mixture of tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (150 mg, 0.47 mmol),2-methylimidazo[1,2-a]pyrazin-6- amine HCl salt (130 mg, 0.71 mmol) and TEA (712 mg, 7.05 mmol) in THF (12 mL) was added triphosgene (167.6 mg, 0.56 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 9) to give title product (100 mg, Y: 43.1%) as a brown solid. ESI-MS (M+H) +: 493.3. Step 4: Preparation of (R)-N-(2-methylimidazo[1,2-a]pyrazin-6-yl)-4-(3-methylpiperazin-1- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01532] A mixture of tert-butyl (R)-2-methyl-4-(1-((2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (80 mg, 0.16 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 1 h. The mixture was concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (22 mg, Y: 34.5 %) as a yellow solid. ESI-MS (M+H) +: 393.2.1H NMR (400 MHz, DMSO- d6+D2O) δ 8.94 (d, J = 1.2 Hz, 1H), 8.71 (s, 1H), 8.38 (s, 1H), 7.96 (d, J = 6.0 Hz, 1H), 7.89 (s, 1H), 6.57 (d, J = 6.1 Hz, 1H), 4.03 – 3.98 (m, 2H), 3.79 – 3.67 (m, 2H), 3.32 (d, J = 10.4 Hz, 2H), 3.20 – 3.03 (m, 4H), 2.97 – 2.88 (m, 1H), 2.39 (s, 3H), 1.27 (d, J = 6.4 Hz, 3H).
Example 522 – Preparation of (S)-N-(6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)- 4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000760_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01533] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-amine (72 mg, 0.38 mmol), TEA (476 mg, 4.72 mmol) in THF (20 mL) was added triphosgene (112 mg, 0.38 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (30 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (40 mg, Y: 24.0 %) as a yellow solid. ESI-MS (M+H) +:537.4. Step 2: Preparation of (S)-N-(6-ethoxy-2-methyl-2H-benzo[d][1,2,3]triazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01534] To a solution of tert-butyl (S)-4-(1-((6-ethoxy-2-methyl-2H- benzo[d][1,2,3]triazol-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (30 mg, 0.06 mmol) in EA (2 mL) was added 4M HCl / EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (12 mg, 44.5 %) as a white solid. ESI-MS (M+H)+:437.3.1H NMR (400 MHz, MeOD-d4) δ 8.64 (s, 1H), 8.51 (s, 1H), 7.97 (d, J = 5.9 Hz, 1H), 7.14 (s, 1H), 6.55 (d, J = 6.0 Hz, 1H), 4.38 (s, 3H), 4.21 (q, J = 6.9 Hz, 2H), 4.10 (t, J = 8.6 Hz, 2H), 3.77 – 3.70 (m, 2H), 3.41 – 3.35 (m, 2H), 3.24 – 3.11 (m, 4H), 2.88 (dd, J = 13.3, 10.4 Hz, 1H), 1.63 (t, J = 6.9 Hz, 3H), 1.34 (d, J = 6.5 Hz, 3H). Example 523 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((3R)- 3-(1-hydroxyethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000761_0001
Compound 523 Step 1: Preparation of 4-benzyl 1-(tert-butyl) (R)-2-(methoxy(methyl)carbamoyl)piperazine- 1,4-dicarboxylate. [01535] To a solution of (R)-4-((benzyloxy)carbonyl)-1-(tert- butoxycarbonyl)piperazine-2-carboxylic acid (10.00 g, 27.44 mmol) in DMA (140 mL) were added HATU (12.52 g, 32.93 mmol) and DIEA (7.09 g, 54.89 mmol). The mixture was stirred at r.t for 0.5 h. N,O-dimethylhydroxylamine hydrochloride (3.21 g, 32.93 mmol) was added to the mixture and stirred at rt for 1.5 h. The mixture was diluted with water (100 mL), extracted with EA (200 mLx3). The combined organic layers were washed with brine (100 mLx6) and dried over anhydrous Na2SO4, concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE=1:18) to give the title compound (9.7 g, Y: 86.7 %) as a white solid. ESI-MS (M+H)+: 408.1. Step 2: Preparation of 4-benzyl 1-(tert-butyl) (R)-2-acetylpiperazine-1,4-dicarboxylate. [01536] To a solution of 4-benzyl 1-(tert-butyl) (R)-2- (methoxy(methyl)carbamoyl)piperazine-1,4-dicarboxylate (9.70 g, 23.81 mmol) in dry THF (54 mL) was added Methylmagnesium Bromide (23.8 mL, 71.42 mmol, 3M) at -20°C. The mixture was stirred at -20°C for 1.5 h. The mixture was quenched with Saturated ammonium chloride solution (60 mL), extracted with EA (150 mLx3). The combined organic layers were washed with brine (100 mL), dried over anhydrous Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE=1:15) to give the title compound (5.20 g, Y: 60.2%) as a yellow oil. ESI-MS (M+H-56)+: 307.0. Step 3: Preparation of 4-benzyl 1-(tert-butyl) (2R)-2-(1-hydroxyethyl)piperazine-1,4- dicarboxylate. [01537] To a mixture of 4-benzyl 1-(tert-butyl) (R)-2-acetylpiperazine-1,4- dicarboxylate (5.20 g, 14.35 mmol) in MeOH (120 mL) was added NaBH4 (814 mg, 21.52 mmol). The mixture was stirred at r.t for 0.5 h. The mixture was diluted with water (150 mL) and extracted with DCM (200 mL x3). The combined organic layers were washed with brine (200 mL) ,dried over anhydrous Na2SO4 and concentrated in vacuo to give title compound (4.50 g, Y: 86.0%) as a yellow oil. ESI-MS (M+H-100)+: 265.1. Step 4: Preparation of 4-benzyl 1-(tert-butyl) (2R)-2-(1-((tert- butyldimethylsilyl)oxy)ethyl)piperazine-1,4-dicarboxylate. [01538] To a solution of 4-benzyl 1-(tert-butyl) (2R)-2-(1-hydroxyethyl)piperazine- 1,4-dicarboxylate (4.5 g, 12.35 mmol) in DCM (20 mL) were added TBSCl (5.58 g, 37.04 mmol) and Imidazole (5.04 g, 74.08 mmol), the mixture was stirred at rt for 16 h. The mixture was diluted with water (100 mL) and extracted with DCM (150 mL x3). The combined organic layers were washed with brine (150 mL), dried over anhydrous Na2SO4 and concentrated in vacuo. The crude was purified by silica gel column chromatography (EA: PE=1:20) to give the title compound (4.3 g, Y: 72.7%) as a yellow oil. ESI-MS (M+23)+: 501.2.1H NMR (400 MHz, DMSO-d6) δ 7.36 – 7.31 (m, 5H), 5.09 (s, 2H), 3.88 – 3.83 (m, 4H), 3.04 – 2.92 (m, 3H), 1.38 (s, 9H), 1.23 (s, 1H), 1.17 – 1.05 (m, 3H), 0.80 (s, 9H), 0.00 (s, 3H), -0.04 (s, 3H). Step 5: Preparation of tert-butyl (2R)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)piperazine-1- carboxylate. [01539] To a solution of 4-benzyl 1-(tert-butyl) (2R)-2-(1-((tert- butyldimethylsilyl)oxy)ethyl)piperazine-1,4-dicarboxylate (4.3 g, 8.98 mmol) in MeOH (50 mL) was added 10% palladium on carbon (1.2 g, 10% w/w). The mixture was stirred at r.t for 2 h under hydrogen atmosphere. The mixture was filtered through a Celite pad and the filtrate was concentrated in vacuo to give title compound (2.4 g, Y:77.4%) as a yellow oil.1H NMR (400 MHz, DMSO-d6) δ 4.24 – 4.19 (m, 1H), 3.70 – 3.62 (m, 2H), 2.83 – 2.71 (m, 3H), 2.51 – 2.47 (m, 1H), 2.41 – 2.34 (s, 1H), 1.32 (s, 9H), 1.06 (d, J = 4.0 Hz, 3H), 0.78 (s, 9H), 0.00 (s, 3H), -0.04 (s, 3H). Step 6: Preparation of tert-butyl (2R)-4-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)piperazine-1-carboxylate. [01540] A solution of tert-butyl (2R)-2-(1-((tert- butyldimethylsilyl)oxy)ethyl)piperazine-1-carboxylate (172 mg, 0.5 mmol), 1-(4-bromo-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl)ethan-1-one (100 mg, 0.417 mmol), Cs2CO3 (407 mg, 1.25 mmol) and RuphosG3 (35 mg, 0.042 mmol ) in 1,4-dioxane (10 mL) was stirred at 100 °C for 16 h. The reaction was concentrated in vacuo and the crude was purified by silica gel column chromatography (EA: PE=5:1) to give the title compound (170 mg, 80.9 %) as a brown solid. ESI-MS (M+H)+: 505.2.1H NMR (400 MHz, DMSO-d6) δ 7.91 (d, J = 5.8 Hz, 1H), 6.51 (d, J = 5.9 Hz, 1H), 4.18 – 4.11 (m, 1H), 3.94 – 3.84 (m, 4H), 3.54 (dd, J = 27.5, 12.1 Hz, 2H), 3.16 – 3.07 (m, 1H), 3.06 – 2.96 (m, 3H), 2.86 – 2.78 (m, 1H), 2.51 (s, 3H), 1.40 (s, 9H), 1.16 (d, J = 6.1 Hz, 3H), 0.84 (s, 9H), 0.05 (s, 3H), 0.03 (s, 3H). Step 7: Preparation of tert-butyl (2R)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)-4-(2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01541] To a solution of tert-butyl (2R)-4-(1-acetyl-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)piperazine-1-carboxylate (340 mg, 0.675 mmol) in MeOH : H2O (7 mL: 1 mL) was added KOH (113 mg, 2.02 mmol). The mixture was stirred at 50 oC for 3 h. The mixture was concentrated in vacuo to give title product (300 mg, crude) as a yellow solid. ESI-MS (M+H)+:463.0.1H NMR (400 MHz, DMSO-d6) δ 7.49 (d, J = 5.9 Hz, 1H), 6.00 (d, J = 6.0 Hz, 1H), 5.86 (s, 1H), 4.14 – 4.07 (m, 1H), 3.88 – 3.79 (m, 2H), 3.47 (d, J = 13.0 Hz, 1H), 3.39 – 3.29 (m, 3H), 3.02 (t, J = 11.2 Hz, 1H), 2.94 – 2.87 (m, 2H), 2.82 – 2.75 (m, 1H), 2.71 – 2.63 (m, 1H), 1.35 (s, 9H), 1.12 (d, J = 6.1 Hz, 3H), 0.79 (s, 9H), 0.00 (s, 3H), -0.03 (s, 3H). Step 8: Preparation of tert-butyl (2R)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)-4-(1-((7- fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate. [01542] To a solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (21 mg, 0.13 mmol), triphosgene (39 mg, 0.13 mmol) and TEA (131 mg, 1.3 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (2R)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)-4- (2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (50 mg, 0.108 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was triturated with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The solid was purified by TLC (DCM: MeOH =10:1) to afford title product (30 mg, 42 %) as a white solid. ESI-MS (M+H) +: 654.5.1H NMR (400 MHz, DMSO-d6) δ 11.97 (d, J = 2.1 Hz, 1H), 9.19 (d, J = 7.4 Hz, 1H), 7.90 (d, J = 6.1 Hz, 1H), 7.71 (s, 1H), 7.42 (d, J = 11.6 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.16 – 4.09 (m, 1H), 4.03 – 3.99 (m, 1H), 3.95 – 3.90 (m, 2H), 3.71 – 3.59 (m, 2H), 3.20 – 3.11 (m, 4H), 3.01 – 2.91 (m, 2H), 2.29 (s, 3H), 1.41 (s, 9H), 1.16 (d, J = 6.1 Hz, 3H), 0.85 (s, 9H), 0.06 (s, 3H), 0.04 (s, 3H). Step 9: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((3R)-3-(1- hydroxyethyl)piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01543] A solution of tert-butyl (2R)-2-(1-((tert-butyldimethylsilyl)oxy)ethyl)-4-(1- ((7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate (60 mg, 0.092 mmol) and TFA(2 mL) in DCM (4 mL) was stirred at RT for 16 h. The reaction mixture was concentrated and the solid was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (14 mg, 27.5 %) as a white soild. ESI-MS (M+H) +: 440.2.1H NMR (400 MHz, MeOD-d4) δ 9.63 (d, J = 6.5 Hz, 1H), 8.01 (d, J = 6.0 Hz, 1H), 7.93 (s, 1H), 7.80 (d, J = 9.7 Hz, 1H), 6.66 (d, J = 6.1 Hz, 1H), 4.20 – 4.13 (m, 2H), 3.91 – 3.81 (m, 3H), 3.49 – 3.44 (m, 1H), 3.29 – 3.20 (m, 5H), 3.16 – 3.09 (m, 1H), 2.53 – 2.50 (m, 3H), 1.34 (d, J = 6.3 Hz, 3H). Example 524 – Preparation of (R)-N-(2,7-dimethyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000765_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((2,7-dimethyl-2H-indazol-5-yl)carbamoyl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate. [01544] To a solution of 2,7-dimethyl-2H-indazol-5-amine (49 mg, 0.30 mmol) and TEA (305 mg, 3.02 mmol) in THF (10 mL) was added triphosgene (89 mg, 0.30 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (80 mg, 0.25 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and triturated with MeOH (5 mL) to give the compound (100 mg, 79 %) as a white solid. ESI-MS (M+H) +:506.7.1H NMR (400 MHz, DMSO-d6) δ 11.66 (s, 1H), 8.18 (s, 1H), 7.95 (d, J = 6.1 Hz, 1H), 7.84 (d, J = 1.4 Hz, 1H), 6.97 (s, 1H), 6.51 (d, J = 6.2 Hz, 1H), 4.13 (d, J = 2.1 Hz, 2H), 3.98 (t, J = 8.6 Hz, 2H), 3.78 (d, J = 13.3 Hz, 1H), 3.63 (d, J = 12.7 Hz, 1H), 3.57 (d, J = 12.7 Hz, 1H), 3.17 – 3.11 (m, 2H), 3.05 (dd, J = 12.9, 3.7 Hz, 1H), 2.92 (td, J = 11.9, 3.5 Hz, 1H), 2.48 (s, 3H), 1.42 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (R)-N-(2,7-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin-1-yl)-2,3- dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01545] To a mixture of tert-butyl (R)-4-(1-((2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (80 mg, 0.16 mmol) in EA (2 mL) was added 4M HCl/EA (6 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title product (68 mg, 94 %) as a white solid. ESI-MS (M+H) +:406.2.1H NMR (400 MHz, DMSO-d6) δ 11.68 (s, 1H), 8.25 (s, 1H), 8.18 (s, 1H), 7.93 (d, J = 6.1 Hz, 1H), 7.84 (s, 1H), 6.97 (s, 1H), 6.53 (d, J = 6.2 Hz, 1H), 4.13 (s, 3H), 3.97 (t, J = 8.6 Hz, 2H), 3.62 (d, J = 11.8 Hz, 2H), 3.11 (t, J = 8.6 Hz, 2H), 3.02 (d, J = 11.2 Hz, 1H), 2.91 (t, J = 10.6 Hz, 2H), 2.86 – 2.79 (m, 1H), 2.64 – 2.55 (m, 1H), 2.48 (s, 3H), 1.07 (d, J = 6.3 Hz, 3H). Example 525 – Preparation of (S)-N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000766_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate. [01546] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-amine (82 mg, 0.38 mmol), TEA (476 mg, 4.72 mmol) in THF (10 mL) was added triphosgene (112 mg, 0.38 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL), the precipitate was filtered and triturated with MeOH (5 mL), to get title product (50 mg, Y: 30.8 %) as a yellow solid. ESI- MS (M+H) +:524.3. Step 2: Preparation of (S)-N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01547] To a solution of tert-butyl (S)-4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% FA in water / ACN) to give title compound (8.72 mg, 24.3 %) as a white solid. ESI-MS (M+H)+:424.3.1H NMR (400 MHz, MeOD-d4) δ 9.30 (s, 1H), 8.47 (s, 1H), 7.76 (d, J = 5.6 Hz, 1H), 6.41 (d, J = 5.7 Hz, 1H), 4.18 (s, 3H), 3.98 (t, J = 8.2 Hz, 2H), 3.75 (d, J = 12.2 Hz, 2H), 3.49 – 3.41 (m, 2H), 3.27 – 3.15 (m, 2H), 3.07 (t, J = 8.2 Hz, 2H), 2.99 – 2.92 (m, 1H), 2.39 (s, 3H), 1.39 (d, J = 5.6 Hz, 3H). Example 526 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(8-methoxy-2- methylimidazo[1,2-a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000767_0001
Step 1: Preparation of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01548] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (80 mg, 0.24 mmol), 8-methoxy-2-methylimidazo[1,2- a]pyrazin-6-amine hydrochloride (61 mg, 0.28 mmol) and TEA (291 mg, 2.89 mmol) in THF (8 mL) was added triphosgene (83 mg, 0.28 mmol), the mixture was stirred at 0 oC for 15 min and stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (50 mg, 37.5 %) as a yellow solid. ESI-MS (M+H) +: 537.3. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(8-methoxy-2-methylimidazo[1,2- a]pyrazin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01549] A mixture of tert-butyl 4-(1-((8-methoxy-2-methylimidazo[1,2-a]pyrazin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (40 mg, 0.07 mmol) in 4M HCl / EA (5 mL) was stirred at RT for 2 h. The precipitate was filtered to give title product (27.56 mg, yield: 81.68 %) as a white solid. ESI- MS (M+H) +: 437.2.1H NMR (400 MHz, DMSO-d6+D2O) δ 8.89 (s, 1H), 8.19 (s, 1H), 8.00 (d, J = 6.1 Hz, 1H), 6.68 (d, J = 6.1 Hz, 1H), 4.18 (s, 3H), 4.06 (t, J = 8.6 Hz, 2H), 3.52 (s, 2H), 3.34 (s, 2H), 3.30 – 3.25 (m, 2H), 3.24 – 3.17 (m, 2H), 2.46 (s, 3H), 1.39 (s, 6H). Example 527 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methyl- 2H-pyrazolo[3,4-c]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000768_0001
Step 1: Preparation of tert-butyl 4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01550] To a solution of 7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridine-5- carboxylic acid (81.02 mg, 0.39 mmol) and TEA (118.7 mg, 1.17 mmol) in tol (10 mL) was added DPPA (161 mg, 0.58 mmol) at r.t, after 1 h, the mixture was warmed to 90 oC and stirred for 30 min, then tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (130 mg, 0.39 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE/EA=3:7) to give title product (50 mg, Y: 23.83 %) as a white solid. ESI-MS (M+H) +:537.2. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methyl-2H- pyrazolo[3,4-c]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01551] To a mixture of tert-butyl 4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4- c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (45 mg, 0.08 mmol) in EA (1 mL) was added HCl/EA (2.5 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (8 mg, Y: 21.86 %) as a white solid. ESI-MS (M+H) +:437.2.1H NMR (400 MHz, DMSO-d6) δ 11.81 (s, 1H), 8.26 (s, 1H), 8.24 (s, 1H), 7.92 (d, J = 6.0 Hz, 1H), 7.69 (s, 1H), 6.52 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 4.03 (s, 3H), 4.01 – 3.96 (m, 2H), 3.25 – 3.22 (m, 2H), 3.13 – 3.09 (m, 2H), 3.08 – 3.05 (m, 2H), 2.98 – 2.93 (m, 2H), 1.17 (s, 6H). Example 528 – Preparation of N-(7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5-yl)- 4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate.
Figure imgf000769_0001
Step 1: Preparation of tert-butyl 4-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01552] To a solution of 7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridine-5- carboxylic acid (62.70 mg, 0.30 mmol) and TEA (91.8 mg, 0.91 mmol) in tol (10 mL) was added DPPA (124,9 mg, 0.45 mmol) at r.t, after 1 h, the mixture was warmed to 90 oC and stirred for 30 min, then tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE/EA=3:7) to give title product (30 mg, Y: 18.54 %) as a white solid. ESI-MS (M+H) +:535.4. Step 2: Preparation of tert-butyl 7-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4-c]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate 2,2,2-trifluoroacetate. [01553] To a mixture of tert-butyl 7-(1-((7-methoxy-2-methyl-2H-pyrazolo[3,4- c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (25 mg, 0.05 mmol) in EA (1 mL) was added HCl/EA (2 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (12 mg, Y: 59.06 %) as a white solid. ESI-MS (M+H) +:435.2.1H NMR (400 MHz, DMSO-d6) δ 11.73 (s, 1H), 9.24 (s, 2H), 8.24 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 7.69 (s, 1H), 6.60 (d, J = 6.1 Hz, 1H), 4.14 (s, 3H), 4.05 – 3.99 (m, 5H), 3.44 – 3.31 (m, 6H), 3.14 – 3.08 (m, 2H), 1.05 (t, J = 6.2 Hz, 2H), 0.95 (t, J = 6.3 Hz, 2H). Example 529 – Preparation of (S)-N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- (3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000770_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01554] A mixture of 6-ethoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (166 mg, 0.76 mmol) in Tol (5 mL) were added TEA (191 mg, 1.88 mmol) and DPPA (208 mg, 0.76 mmol). The mixture was stirred at 30 ℃ for 30 min and 60 ℃ for 30 min. Tert- butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.63 mmol) was added to the mixture and stirred at 90 ℃ for 16 h. The mixture was concentrated in vacuo and purified by TLC (PE / EA=1:4) to afford the title product (88 mg, 26.4 %) as a purple solid. ESI-MS (M+H) +: 536.3.1H NMR (400 MHz, DMSO-d6) δ 12.28 (s, 1H), 8.26 (d, J = 9.4 Hz, 2H), 7.87 (d, J = 6.0 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 6.15 (s, 1H), 4.12 (q, J = 6.9 Hz, 2H), 4.00 (t, J = 7.0 Hz, 2H), 3.79 (d, J = 14.0 Hz, 1H), 3.66 – 3.55 (m, 2H), 3.30 – 3.28 (m, 2H), 3.22 – 3.04 (m, 4H), 2.30 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H), 1.42 (s, 9H), 1.19 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01555] A solution of tert-butyl (S)-4-(1-((6-ethoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (88 mg, 0.16 mmol) in 4 M HCl / EA (5 mL) was stirred at r.t for 2 h. The reaction mixture was concentrated in vacuo and purified by Prep-HPLC (0.1 % FA in H2O / CH3CN) to afford the title product (19 mg, 26.4%) as a purple solid. ESI-MS (M+H) +: 436.1.1H NMR (400 MHz, DMSO-d6) δ 12.30 (s, 1H), 8.25 (d, J = 7.5 Hz, 3H), 7.83 – 7.81 (m, 1H), 6.54 (d, J = 6.1 Hz, 1H), 6.15 (s, 1H), 4.11 (t, J = 6.9 Hz, 2H), 3.99 (t, J = 8.4 Hz, 2H), 3.57 – 3.55 (m, 2H), 3.12 (t, J = 8.7 Hz, 2H), 2.97 (d, J = 11.4 Hz, 1H), 2.89 – 2.74 (m, 4H), 2.30 (s, 3H), 1.50 (t, J = 6.9 Hz, 3H), 1.04 (d, J = 6.3 Hz, 3H). Example 530 – Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4- (6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1- carboxamide.
Figure imgf000771_0001
Compound 530 Step 1: Preparation of tert-butyl (R)-2-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane- 9-carboxylate. [01556] The tert-butyl 2-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6-oxa-2,9-diazaspiro[4.5] decane- 9-carboxylate (200 mg) was purified by Chiral-SFC to afford tert-butyl (R)-2-(1-((8-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6- oxa-2,9-diazaspiro[4.5]decane-9-carboxylate (50 mg, the first fraction) as a yellow solid and tert-butyl (S)-2-(1-((8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro- 1H-pyrrolo[2,3-b]pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (50 mg, the second fraction). [01557] Note: The absolute configuration was not determined. The depicted stereoisomers were assigned at random. Step 2: Preparation of (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9- diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. [01558] To a mixture of tert-butyl (R)-2-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin- 6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (30 mg, 0.054 mmol) in DCM (1 mL) was added HCl/dioxane (1 mL, 6 mmol) dropwise at room temperature under nitrogen atmosphere. The resulting mixture was stirred for 1 hour at room temperature under nitrogen atmosphere. The resulting mixture was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% NH4HCO3 in water / ACN) to afford (S)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide (20 mg, yield: 80%) as a yellow solid. ESI-MS (M+1) +: 452.2.1H NMR (400 MHz, CD3OD) δ 8.69 (d, J = 1.6 Hz, 1H), 7.78 (d, J = 6.1 Hz, 1H), 7.63 (d, J = 2.3 Hz, 1H), 7.11 (dd, J = 12.0, 1.6 Hz, 1H), 6.17 (d, J = 6.2 Hz, 1H), 3.99 (dt, J = 10.1, 7.1 Hz, 2H), 3.75 – 3.61 (m, 5H), 3.54 (d, J = 10.7 Hz, 1H), 3.43 – 3.34 (m, 2H), 2.95 – 2.77 (m, 4H), 2.39 (s, 3H), 2.27 – 2.20 (m, 1H), 1.93 (dt, J = 13.2, 8.8 Hz, 1H). Example 531 – Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-(6- oxa-2,9-diazaspiro[4.5]decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000773_0001
Step 1: Preparation of (R)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9- diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide. [01559] To a mixture of tert-butyl (S)-2-(1-((8-fluoro-2-methylimidazo[1,2-a] pyridin- 6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (30 mg, 0.054 mmol) in DCM (1 mL) was added HCl/dioxane (1 mL, 6 mmol) dropwise at room temperature under nitrogen atmosphere. The resulting mixture was stirred for 1 hour at room temperature under nitrogen atmosphere. The resulting mixture was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% NH4HCO3 in water / ACN) to afford (R)-N-(8-fluoro-2-methylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide (20 mg, 80%) as a yellow solid. ESI-MS (M+1) +: 452.3.1H NMR (400 MHz, CD3OD) δ 8.68 (d, J = 1.5 Hz, 1H), 7.76 (d, J = 6.1 Hz, 1H), 7.61 (d, J = 2.5 Hz, 1H), 7.08 (dd, J = 12.0, 1.5 Hz, 1H), 6.14 (d, J = 6.2 Hz, 1H), 3.97 (dt, J = 10.2, 7.1 Hz, 2H), 3.76 – 3.67 (m, 3H), 3.64 – 3.57 (m, 2H), 3.51 (d, J = 10.7 Hz, 1H), 3.41 – 3.33 (m, 2H), 2.85 (dt, J = 10.3, 8.6 Hz, 4H), 2.38 (s, 3H), 2.27 – 2.19 (m, 1H), 1.96 – 1.88 (m, 1H). Note: The absolute configuration was not determined. The depicted stereoisomers were assigned at random. Example 532 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(7-ethoxy-2- methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide.
Figure imgf000774_0001
Compound 532 Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01560] To a mixture of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (150 mg, 0.45 mmol), 7-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (86.40 mg, 0.45 mmol) and TEA (136.35 mg, 1.35 mmol) in THF (5 mL) was added triphosgene (266.40 mg, 0.90 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (40 mg, 16.16%) as a yellow solid. ESI-MS (M+H) +: 551.3. Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(7-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01561] A mixture of tert-butyl (2S,6R)-4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (40 mg, 0.07 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% NH3.H2O in water / CH3CN) to give title product (3.39 mg, 10.76%) as a yellow solid. ESI-MS (M+H) +:451.4.1H NMR (400 MHz, MeOD-d4) δ 9.35 (s, 1H), 7.77 (d, J = 6.0 Hz, 1H), 6.86 (s, 1H), 6.43 (d, J = 6.0 Hz, 1H), 4.25 – 4.17 (m, 2H), 4.04 – 3.95 (m, 2H), 3.69 – 3.61 (m, 2H), 3.11 – 3.03 (m, 4H), 2.58 – 2.50 (m, 2H), 2.40 (s, 3H), 1.61 (t, J = 6.9 Hz, 3H), 1.20 (d, J = 6.4 Hz, 6H). Example 533 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000775_0001
Step 1: Preparation of tert-butyl 4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01562] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 7-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (83 mg, 0.36 mmol), TEA (456 mg, 4.52 mmol) in THF (20 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (30 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (30 mg, Y: 18.1 %) as a yellow solid. ESI- MS (M+H) +:551.4. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(7-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01563] To a solution of tert-butyl 4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (30 mg, 0.05 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (1.58 mg, 5.1 %) as a white solid. ESI-MS (M+H)+:451.2.1H NMR (400 MHz, MeOD-d4) δ 9.55 (s, 1H), 7.97 (d, J = 5.9 Hz, 1H), 7.16 (s, 1H), 6.61 (d, J = 6.0 Hz, 1H), 4.35 (q, J = 6.9 Hz, 2H), 4.13 (t, J = 8.5 Hz, 2H), 3.53 – 3.50 (m, 2H), 3.45 – 3.42 (m, 2H), 3.34 – 3.33 (m, 2H), 3.21 (t, J = 8.5 Hz, 2H), 2.52 (s, 3H), 1.67 (t, J = 6.9 Hz, 3H), 1.51 (s, 6H). Example 534 – Preparation of (R)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000776_0001
Compound 534 Step 1: Preparation of 1,2-diamino-5-bromopyrazin-1-ium. [01564] To a mixture of 5-bromopyrazin-2-amine (9.5 g, 54.60 mmol) in DCM (5 mL) was added O-(mesitylsulfonyl)hydroxylamine (14.1 g, 65.52 mmol). The mixture was stirred at r.t for 16 h under Nitrogen atmosphere. The precipitate was filtered and concentrated in vacuo to give the title compound (12 g, Y: 56.5 %) as a brown solid. ESI-MS (M+H) +:191.0. Step 2: Preparation of 6-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyrazine. [01565] To a solution of 1,2-diamino-5-bromopyrazin-1-ium (12 g, 30.85 mmol) in Ac2O (108 mL) was added con. HCl (12 mL) at 0oC. The reaction mixture was stirred at 100oC for 16 h. The mixture was concentrated in vacuo and the residue was adjust pH to 9 and the precipitate was filtered and concentrated in vacuo to give the title compound (4.0 g, Y: 60.9 %) as a grey solid. ESI-MS (M+H) +:213.1. Step 3: Preparation of methyl 2-methyl-[1,2,4]triazolo[1,5-a]pyrazine-6-carboxylate. [01566] To a mixture of 6-bromo-2-methyl-[1,2,4]triazolo[1,5-a]pyrazine (500 mg, 2.35 mmol) in MeOH (5 mL) were added TEA (5 mL) was added Pd(dppf)Cl2 (172 mg, 0.23 mmol). The mixture was stirred at 80oC for 16 h under CO atmosphere. The mixture was concentrated in vacuo and the residue was purified by flash chromatography (PE: EA= 1:2) to get title product (300 mg, 66.5%) as a brown solid. ESI-MS (M+H)+: 193.1. Step 4: Preparation of 2-methyl-[1,2,4]triazolo[1,5-a]pyrazine-6-carboxylic acid. [01567] To a solution of methyl 2-methyl-[1,2,4]triazolo[1,5-a]pyrazine-6-carboxylate (300 mg, 1.56 mmol) in THF: MeOH: H2O (v: v: v= 5: 1: 1, 7 mL) was added LiOH (188 mg, 7.81 mmol). The reaction mixture was stirred at r.t for 16 h. The mixture was concentrated in vacuo, the residue was adjust pH to 5, the precipitate was filtered and concentrated in vacuo to give the title compound (100 mg, Y: 36.0 %) as a white solid. ESI- MS (M+H) +:179.2. Step 5: Preparation of tert-butyl (R)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5-a]pyrazin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01568] To a mixture of 2-methyl-[1,2,4]triazolo[1,5-a]pyrazine-6-carboxylic acid (84 mg, 0.47 mmol) in toluene (10 mL) were added TEA (127 mg, 1.26 mmol), DPPA (242 mg, 0.88 mmol). The mixture was stirred at r.t for 1 h and warmed up to 90oC and stirred for 1 h. Tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (100 mg, 0.31 mmol) was added to the mixture and stirred at 110oC for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered and concentrated in vacuo to give the title compound (30 mg, Y: 19.6 %) as a brown solid. ESI-MS (M+H) +:494.3. Step 6: Preparation of (R)-N-(2-methyl-[1,2,4]triazolo[1,5-a]pyrazin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01569] To a solution of tert-butyl (R)-2-methyl-4-(1-((2-methyl-[1,2,4]triazolo[1,5- a]pyrazin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)piperazine-1- carboxylate (40 mg, 0.08 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% NH3.H2O in water / ACN) to give title compound (1.31 mg, 5.5 %) as a white solid. ESI-MS (M+H)+:394.3.1H NMR (400 MHz, MeOD-d4) δ 9.35 (d, J = 1.4 Hz, 1H), 8.93 (d, J = 1.3 Hz, 1H), 7.94 (d, J = 6.0 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 4.12 – 4.07 (m, 2H), 3.64 – 3.60 (m, 2H), 3.33 – 3.31 (m, 2H), 3.17 (t, J = 8.5 Hz, 2H), 3.07 – 3.03 (m, 1H), 2.92 – 2.90 (m, 2H), 2.58 (s, 3H), 1.14 (d, J = 6.4 Hz, 3H). Example 535 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000778_0001
Step 1: Preparation of tert-butyl 4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01570] To a mixture of tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol), 5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-amine (78 mg, 0.36 mmol), TEA (456 mg, 4.52 mmol) in THF (10 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (50 mg, Y: 31.0 %) as a yellow solid. ESI- MS (M+H) +:538.4. Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01571] To a solution of tert-butyl 4-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (40 mg, 0.07 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (22.4 mg, 54.6 %) as a yellow solid. ESI-MS (M+H)+:438.3. 1H NMR (400 MHz, MeOD-d4) δ 9.56 (s, 1H), 8.01 (d, J = 6.0 Hz, 1H), 6.63 (d, J = 6.0 Hz, 1H), 4.28 (s, 3H), 4.16 – 4.11 (m, 2H), 3.55 – 3.52 (m, 2H), 3.45 – 3.42 (m, 2H), 3.36 – 3.34 (m, 2H), 3.22 (t, J = 8.5 Hz, 2H), 2.50 (s, 3H), 1.51 (s, 6H). Example 536 – Preparation of (S)-N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000779_0001
Compound 536 Step 1: Preparation of tert-butyl (S)-4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01572] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol), 7-ethoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyridin-6-amine (60.38 mg, 0.31 mmol) and TEA (93.93 mg, 0.93 mmol) in THF (5 mL) was added triphosgene (183.52 mg, 0.62 mmol) at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with H2O (10 mL) and extracted with EA (10 mL x 3). The organic phase was washed with brine (20 mL x 3), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 1/100) to afford title product (50 mg, 30.09%) as a white solid. ESI-MS (M+H) +: 537.3. Step 2: Preparation of (S)-N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01573] A mixture of tert-butyl (S)-4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (50 mg, 0.09 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (1.58 mg, 3.64%) as a white solid. ESI-MS (M+H) +:437.3.1H NMR (400 MHz, MeOD-d4) δ 9.25 (s, 1H), 8.54 (s, 1H), 7.70 (d, J = 6.0 Hz, 1H), 6.76 (s, 1H), 6.40 (d, J = 6.0 Hz, 1H), 4.20 – 4.11 (m, 2H), 4.00 – 3.91 (m, 2H), 3.74 – 3.63 (m, 2H), 3.38 – 3.32 (m, 2H), 3.20 – 3.07 (m, 2H), 3.06 – 3.00 (m, 2H), 2.88 – 2.79 (m, 1H), 2.37 (s, 3H), 1.57 (t, J = 6.9 Hz, 3H), 1.34 (d, J = 6.5 Hz, 3H). Example 537 – Preparation of N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6- yl)-4-(4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000780_0001
Step 1: Preparation of tert-butyl 7-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01574] To a mixture of tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (100 mg, 0.30 mmol), 5-methoxy-2-methyl- [1,2,4]triazolo[1,5-a]pyrimidin-6-amine (79 mg, 0.36 mmol), TEA (456 mg, 4.52 mmol) in THF (10 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL), the precipitate was filtered and triturated with MeOH (5 mL) to get title product (50 mg, Y: 31.1 %) as a yellow solid. ESI- MS (M+H) +:536.3. Step 2: Preparation of N-(5-methoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-6-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate. [01575] To a solution of tert-butyl 7-(1-((5-methoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7- diazaspiro[2.5]octane-4-carboxylate (40 mg, 0.07 mmol) in EA (2 mL) was added 4M HCl/EA (2 mL). The reaction mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (11.39 mg, 27.8 %) as a white solid. ESI-MS (M+H)+:436.3.1H NMR (400 MHz, MeOD-d4) δ 9.53 (s, 1H), 7.98 (d, J = 6.0 Hz, 1H), 6.58 (d, J = 6.1 Hz, 1H), 4.26 (s, 3H), 4.13 – 4.09 (m, 2H), 3.64 – 3.61 (m, 2H), 3.53 – 3.50 (m, 2H), 3.46 – 3.44 (m, 2H), 3.19 – 3.14 (m, 2H), 2.48 (s, 3H), 1.15 – 1.13 (m, 2H), 1.11 – 1.09 (m, 2H). Example 538 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2,7- dimethyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000781_0001
Boc Compound 538 Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01576] To a solution of 6-fluoro-2,7-dimethyl-2H-indazol-5-amine hydrochloride (65 mg, 0.36 mmol) and TEA (365 mg, 3.61 mmol) in THF (12 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC, after 10 min, tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) was added at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (100 mg, 61.83 %) as a white solid. ESI-MS (M+H) +:538.2.1H NMR (400 MHz, DMSO-d6) δ 11.98 (d, J = 2.9 Hz, 1H), 8.31 – 8.23 (m, 2H), 7.94 (d, J = 6.1 Hz, 1H), 6.56 (d, J = 6.0 Hz, 1H), 4.14 – 4.09 (m, 5H), 4.06 – 3.99 (m, 2H), 3.61 – 3.56 (m, 2H), 3.22 – 3.16 (m, 2H), 3.02 – 2.95 (m, 2H), 2.43 (s, 3H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-fluoro-2,7-dimethyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01577] To a mixture of tert-butyl (2S,6R)-4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (90 mg, 0.17 mmol) in EA (2 mL) was added HCl/EA (5 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % FA in water / ACN) to give title product (40 mg, Y: 61.44 %) as a white solid. ESI-MS (M+H) +:438.2.1H NMR (400 MHz, DMSO-d6) δ 12.03 (d, J = 3.0 Hz, 1H), 8.27 (d, J = 7.5 Hz, 2H), 8.22 (s, 1H), 7.87 (d, J = 6.1 Hz, 1H), 6.52 (d, J = 6.2 Hz, 1H), 4.12 (s, 3H), 4.02 – 3.96 (m, 2H), 3.66 – 3.61 (m, 3H), 3.18 – 3.10 (m, 3H), 2.92 – 2.85 (m, 2H), 2.43 (d, J = 1.8 Hz, 3H), 1.04 (d, J = 6.3 Hz, 6H). Example 539 – Preparation of (S)-N-(6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000782_0001
Step 1: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01578] To a mixture of 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5-carboxylic acid (130 mg, 0.629 mmol) in toluene (5 mL) were added DPPA (259 mg, 0.943 mmol) and TEA (191 mg, 1.887 mmol) at 0 oC. The mixture was stirred at 30 oC for 1 h. Then tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.629 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was triturated with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The residue was triturated with MeOH (5 mL*2) to afford title product (50 mg, 15.3 %) as a white solid. ESI-MS (M+H) +: 523.4.1H NMR (400 MHz, DMSO-d6) δ 12.45 (s, 1H), 8.52 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 6.30 (s, 1H), 4.21 – 4.15 (m, 1H), 4.09 (s, 3H), 4.00 (t, J = 8.6 Hz, 2H), 3.78 (d, J = 13.2 Hz, 1H), 3.69 – 3.54 (m, 2H), 3.21 – 3.12 (m, 3H), 3.11 – 3.04 (m, 1H), 3.00 – 2.88 (m, 1H), 2.31 (s, 3H), 1.18 (d, J = 6.7 Hz, 3H). Step 2: Preparation of (S)-N-(6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01579] A mixture of tert-butyl (S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5- b]pyridazin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (50 mg, 0.096 mmol) in 4 M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and lyophilized to give title product (29 mg, 66.1 %) as a white solid. ESI-MS (M+H) +: 423.2.1H NMR (400 MHz, DMSO-d6) δ 12.39 (s, 1H), 9.43 – 8.99 (m, 2H), 8.52 (s, 1H), 8.02 (d, J = 6.1 Hz, 1H), 6.65 (d, J = 6.1 Hz, 1H), 6.31 (s, 1H), 4.10 (s, 3H), 4.02 (t, J = 8.7 Hz, 2H), 3.81 – 3.79 (m, 2H), 3.34 (d, J = 11.7 Hz, 2H), 3.25 (s, 1H), 3.20 – 3.14 (m, 2H), 3.13 – 2.99 (m, 2H), 2.32 (s, 3H), 1.29 (d, J = 6.2 Hz, 3H). [01580] Example 540 – Preparation of (R)-N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000783_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01581] To a solution of 7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-amine (72 mg, 0.38 mmol) and TEA (381 mg, 3.77 mmol) in THF (10 mL) was added triphosgene (113 mg, 0.38 mmol) at 0oC, after 10 min, tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2-methylpiperazine-1-carboxylate (100 mg, 0.31 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and triturated with MeOH (5 mL) to give the compound (50 mg, 30 %) as a yellow solid. ESI-MS (M+H) +:537.3.1H NMR (400 MHz, DMSO-d6) δ 12.26 (s, 1H), 9.37 (s, 1H), 7.86 (d, J = 6.0 Hz, 1H), 7.16 (s, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.26 (q, J = 7.0 Hz, 2H), 4.20 – 4.15 (m, 1H), 4.04 – 3.98 (m, 2H), 3.79 (d, J = 13.1 Hz, 1H), 3.65 – 3.56 (m, 2H), 3.20 – 3.05 (m, 4H), 2.98 – 2.88 (m, 1H), 2.38 (s, 3H), 1.54 (t, J = 6.9 Hz, 3H), 1.42 (s, 9H), 1.18 (d, J = 7.1 Hz, 3H). Step 2: Preparation of (R)-N-(7-ethoxy-2-methyl-[1,2,4]triazolo[1,5-a]pyridin-6-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01582] To a mixture of tert-butyl (R)-4-(1-((7-ethoxy-2-methyl-[1,2,4]triazolo[1,5- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate (40 mg, 0.07 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.05% FA in H2O / ACN) to give title product (9.95 mg, 29 %) as a white solid. ESI-MS (M+H) +:437.2.1H NMR (400 MHz, DMSO-d6) δ 12.29 (s, 1H), 9.38 (s, 1H), 8.28 (s, 1H), 7.84 (d, J = 6.1 Hz, 1H), 7.16 (s, 1H), 6.54 (d, J = 6.2 Hz, 1H), 4.26 (q, J = 7.0 Hz, 2H), 4.00 (t, J = 8.6 Hz, 2H), 3.58 (d, J = 11.7 Hz, 4H), 3.14 (s, 2H), 2.94 (d, J = 11.4 Hz, 1H), 2.79 (d, J = 7.0 Hz, 2H), 2.38 (s, 3H), 1.54 (t, J = 6.9 Hz, 3H), 1.02 (d, J = 6.3 Hz, 3H). Example 541 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2- methyl-3,3a-dihydro-2H-pyrazolo[3,4-c]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxamide diformate.
Figure imgf000784_0001
Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methyl-3,3a-dihydro-2H- pyrazolo[3,4-c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01583] To a mixture of 7-methoxy-2-methyl-3,3a-dihydro-2H-pyrazolo[3,4- c]pyridine-5-carboxylic acid (40 mg, 0.22 mmol), TEA (67 mg, 0.66 mmol) and DPPA (90.7 mg, 0.33 mmol) in Tol (3 mL) was stirred at RT for 1 h, heated to 90 oC stirred for 0.5h, tert- butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate (73 mg, 0.22 mmol) was added to the mixture and stirred at 90oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 8) to give title product (50 mg, Y: 42.7%) as a yellow solid. ESI-MS (M+H) +: 537.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-methoxy-2-methyl-3,3a- dihydro-2H-pyrazolo[3,4-c]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide diformate. [01584] A mixture of tert-butyl (2R,6S)-4-(1-((7-methoxy-2-methyl-3,3a-dihydro-2H- pyrazolo[3,4-c]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (40 mg, 0.07 mmol) in 4M HCl/EA (2 mL) was stirred at RT for 1 h. The mixture concentrated in vacuo and purified by prep-HPLC (0.1 % FA in water / CH3CN) to give title product (5 mg, Y: 15.6 %) as a white solid. ESI-MS (M+H) +: 437.2.1H NMR (400 MHz, MeOD-d4) δ 8.52 (s, 2H), 8.11 (s, 1H), 8.02 (d, J = 6.0 Hz, 1H), 7.65 (s, 1H), 6.59 (d, J = 6.1 Hz, 1H), 4.21 (s, 3H), 4.13 (s, 3H), 4.09 (d, J = 8.7 Hz, 2H), 3.78 (d, J = 13.5 Hz, 2H), 3.42 – 3.35 (m, 2H), 3.14 (t, J = 8.4 Hz, 2H), 2.83 (t, J = 12.0 Hz, 2H), 1.35 (d, J = 6.5 Hz, 6H). Example 542 – Preparation of (R)-N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000785_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01585] To a solution of 6-fluoro-2,7-dimethyl-2H-indazol-5-amine HCl salt (81 mg, 0.38 mmol) and TEA (457 mg, 4.52 mmol) in THF (12 mL) was added triphosgene (134 mg, 0.45 mmol) at 0oC, after 10 min, tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2-methylpiperazine-1-carboxylate (120 mg, 0.37 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (50 mL). The precipitate was filtered and triturated with MeOH (10 mL) to give the compound (130 mg, 79.06 %) as a white solid. ESI-MS (M+H) +:524.3. Step 2: Preparation of (R)-N-(6-fluoro-2,7-dimethyl-2H-indazol-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01586] To a mixture of tert-butyl (R)-4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (120 mg, 0.23 mmol) in EA (3 mL) was added HCl/EA (6 mL, 4 M). The mixture was stirred at r.t for 2 h. The precipitate was filtered and purified by prep-HPLC (0.05 % TFA in water / ACN) to give title product (80 mg, Y: 82.43 %) as a white solid. ESI-MS (M+H) +:424.4.1H NMR (400 MHz, DMSO-d6) δ 11.89 (s, 1H), 9.07 (s, 1H), 8.75 (s, 1H), 8.26 (d, J = 12.3 Hz, 2H), 7.95 (d, J = 6.1 Hz, 1H), 6.63 (d, J = 6.1 Hz, 1H), 4.13 (s, 3H), 4.05 – 4.02 (m, 2H), 3.83 – 3.78 (m, 2H), 3.41 – 3.34 (m, 2H), 3.23 – 3.12 (m, 4H), 3.03 – 2.95 (m, 1H), 2.43 (d, J = 1.6 Hz, 3H), 1.27 (d, J = 6.5 Hz, 3H). Example 543 – Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2,7-dimethyl- 2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000786_0001
Step 1: Preparation of tert-butyl 4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate. [01587] To a solution of 6-fluoro-2,7-dimethyl-2H-indazol-5-amine hydrochloride (80 mg, 0.45 mmol) in THF (20 mL) were added TEA (600 mg, 6.00 mmol) and triphosgene (110 mg, 0.37 mmol) at 0oC, after 5 min, tert-butyl 4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2,2-dimethylpiperazine-1-carboxylate (100 mg, 0.30 mmol) was added slowly at 0 oC to the mixture and stirred at r.t for 16 h. The reaction mixture was diluted with water (20 mL) and extracted with EA (20 mLx3). The combined organic layer was washed with brine, dried over Na2SO4, filtered and concentrated in vacuo. The residue was purified by prep-HPLC (0.1% TFA in H2O/ ACN) to give title product (80 mg, 49 %) as a white solid. ESI-MS (M+H) +: 538.3.1H NMR (400 MHz, DMSO-d6) δ 12.24 – 12.01 (m, 1H), 8.27 (d, J = 8.9 Hz, 2H), 7.83 (d, J = 6.1 Hz, 1H), 6.40 (d, J = 6.3 Hz, 1H), 4.12 (s, 3H), 4.01 – 3.93 (m, 2H), 3.73 – 3.67 (m, 2H), 3.59 – 3.51 (m, 4H), 3.31 – 3.27 (m, 2H), 2.43 (d, J = 1.7 Hz, 3H), 1.43 (s, 9H), 1.38 (s, 6H). Step 2: Preparation of 4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2,7-dimethyl-2H-indazol- 5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01588] To a mixture of tert-butyl 4-(1-((6-fluoro-2,7-dimethyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate (80 mg, 0.15 mmol) in EA (5 mL) was added 4M HCl/EA (5 mL). The mixture was stirred at r.t for 2 h. Concentration under reduced pressure to give title product (42.51 mg, 59%) as a white solid. ESI-MS (M+H) +:438.2.1H NMR (400 MHz, MeOD-d4) δ 8.42 (s, 1H), 7.81 (dd, J = 12.5, 7.2 Hz, 2H), 6.94 (d, J = 7.4 Hz, 1H), 4.44 – 4.37 (m, 2H), 4.27 (s, 3H), 4.00 – 3.92 (m, 2H), 3.80 – 3.74 (m, 2H), 3.60 – 3.53 (m, 2H), 3.50 – 3.46 (m, 2H), 2.50 (d, J = 2.0 Hz, 3H), 1.50 (s, 6H). Example 544 – Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-b]pyridazin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000787_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-methoxy-2-methylpyrazolo[1,5- b]pyridazin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate. [01589] To a mixture of 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5-carboxylic acid (125 mg, 0.602 mmol) in toluene (5 mL) were added DPPA (248 mg, 0.904 mmol) and TEA (183 mg, 1.807 mmol) at 0 oC. The mixture was stirred at 30 oC for 1 h. Then tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1-carboxylate (200 mg, 0.602 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The solid was triturated with MeOH (5 mL*2) to afford title product (70 mg, 21.7 %) as a white solid. ESI-MS (M+H) +: 537.0.1H NMR (400 MHz, DMSO-d6) δ 12.44 (s, 1H), 8.53 (s, 1H), 8.02 (s, 1H), 6.60 (d, J = 6.0 Hz, 1H), 6.31 (s, 1H), 4.10 (s, 3H), 4.08 – 4.04 (m, 2H), 4.04 – 3.99 (m, 2H), 3.25 – 3.24 (m, 2H), 3.20 – 3.17 (m, 2H), 3.03 – 2.99 (m, 2H), 2.32 (s, 3H), 1.43 (s, 9H), 1.26 (d, J = 6.8 Hz, 6H). Step 2: Preparation of 4-((3S,5R)-3,5-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-b]pyridazin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01590] A mixture of tert-butyl (2S,6R)-4-(1-((6-methoxy-2-methylpyrazolo[1,5- b]pyridazin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (40 mg, 0.075 mmol) in 4 M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and lyophilized to give title product (30 mg, 85.2 %) as a white solid. ESI-MS (M+H) +: 437.2.1H NMR (400 MHz, DMSO-d6) δ 12.35 (s, 1H), 9.73 (s, 1H), 9.26 (s, 1H), 8.51 (s, 1H), 8.00 (d, J = 6.0 Hz, 1H), 6.67 (d, J = 6.1 Hz, 1H), 6.31 (s, 1H), 4.10 (s, 3H), 4.02 (t, J = 8.4 Hz, 2H), 3.85 (d, J = 13.3 Hz, 2H), 3.32 (s, 2H), 3.19 (t, J = 8.4 Hz, 2H), 3.02 (t, J = 12.2 Hz, 2H), 2.32 (s, 3H), 1.31 (d, J = 6.4 Hz, 6H). Example 545 – Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5-yl)-4- (4,7-diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000788_0001
Step 1: Preparation of tert-butyl 7-(1-((6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate. [01591] To a mixture of 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5-carboxylic acid (125 mg, 0.606 mmol) in toluene (5 mL) were added DPPA (250 mg, 0.909 mmol) and TEA (184 mg, 1.818 mmol) at 0 oC. The mixture was stirred at 30 oC for 1 h. Then tert-butyl 7-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4-carboxylate (200 mg, 0.606 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The residue was triturated with MeOH (5 mL*2) to afford title product (40 mg, 12.4 %) as a white solid. ESI-MS (M+H) +: 534.9.1H NMR (400 MHz, DMSO-d6) δ 12.45 (s, 1H), 8.51 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.54 (d, J = 6.1 Hz, 1H), 6.30 (s, 1H), 4.09 (s, 3H), 3.97 – 3.93 (m, 2H), 3.59 – 3.49 (m, 4H), 3.17 (d, J = 5.2 Hz, 2H), 3.13 – 3.12 (m, 2H), 2.32 (s, 3H), 1.42 (s, 9H), 0.97 – 0.89 (m, 4H). Step 2: Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5-yl)-4-(4,7- diazaspiro[2.5]octan-7-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01592] A mixture of tert-butyl 7-(1-((6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-4,7-diazaspiro[2.5]octane-4- carboxylate (50 mg, 0.094 mmol) in 4 M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (11.7 mg, 32.5 %) as a yellow solid. ESI-MS (M+H) +: 435.0.1H NMR (400 MHz, DMSO-d6) δ 12.44 (s, 1H), 8.50 (s, 1H), 8.15 (s, 1H), 7.95 (d, J = 6.0 Hz, 1H), 6.53 (d, J = 6.1 Hz, 1H), 6.29 (s, 1H), 4.09 (s, 3H), 3.99 – 3.95 (m, 2H), 3.37 (s, 2H), 3.22 (s, 2H), 3.11 – 3.06 (m, 2H), 3.03 (s, 2H), 2.31 (s, 3H), 0.69 (d, J = 14.4 Hz, 4H).
Example 546 – Preparation of (R)-N-(6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000790_0001
Step 1: Preparation of tert-butyl (R)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01593] To a mixture of 6-methoxy-2-methylpyrazolo[1,5-b]pyridazine-5-carboxylic acid (130 mg, 0.629 mmol) in toluene (5 mL) were added DPPA (259 mg, 0.943 mmol) and TEA (191 mg, 1.887 mmol) at 0 oC. The mixture was stirred at 30 oC for 1 h. Then tert-butyl (R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.629 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was diluted with H2O (15 mL) and extracted with DCM (15 mL×3). The organic layer was concentrated in vacuo. The residue was triturated with MeOH (5 mL*2) to afford title product (50 mg, 15.3 %) as a white solid. ESI-MS (M+H) +: 523.3.1H NMR (400 MHz, DMSO-d6) δ 12.44 (s, 1H), 8.51 (s, 1H), 7.97 (d, J = 6.0 Hz, 1H), 6.53 (d, J = 6.2 Hz, 1H), 6.29 (s, 1H), 4.10 – 4.08 (m, 3H), 4.03 – 3.98 (m, 2H), 3.84 – 3.74 (m, 2H), 3.67 – 3.55 (m, 3H), 3.18 – 3.16 (m, 4H), 2.31 (s, 3H), 1.42 (s, 9H), 1.19 – 1.16 (m, 3H). Step 2: Preparation of (R)-N-(6-methoxy-2-methylpyrazolo[1,5-b]pyridazin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01594] A mixture of tert-butyl (R)-4-(1-((6-methoxy-2-methylpyrazolo[1,5- b]pyridazin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (60 mg, 0.115 mmol) in 4 M HCl /EA (3 mL) was stirred at RT for 2 h. The reaction mixture was concentrated and the residue was purified by prep- HPLC (0.1% FA in H2O / ACN) to give title product (8.6 mg, 19.2 %) as a yellow solid. ESI- MS (M+H) +: 423.0.1H NMR (400 MHz, DMSO-d6) δ 12.47 (s, 1H), 8.51 (s, 1H), 8.29 (s, 1H), 7.94 (d, J = 5.7 Hz, 1H), 6.53 (d, J = 6.0 Hz, 1H), 6.29 (s, 1H), 4.09 (s, 3H), 3.98 (t, J = 8.0 Hz, 2H), 3.60 (d, J = 11.4 Hz, 2H), 3.13 (t, J = 8.2 Hz, 2H), 2.97 (d, J = 11.0 Hz, 1H), 2.90 – 2.74 (m, 3H), 2.56 – 2.55 (m, 1H), 2.31 (s, 3H), 1.04 (d, J = 5.8 Hz, 3H). Example 547 – Preparation of (S)-N-(2,4-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3- methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000791_0001
Compound 547 Step 1: Preparation of 2,4-dimethylpyrazolo[1,5-a]pyridin-5-amine. [01595] A solution of ethyl 5-((tert-butoxycarbonyl)amino)-2,6-dimethylpyrazolo[1,5- a]pyridine-3-carboxylate (16 g, 48.05 mmol) and TES (11.14 g, 96.09 mmol) in 33% HBr in AcOH (240 mL) was stirred at 100 oC for 16 h. The mixture was concentrated in vacuo, the residue was diluted with water (50 mL), adjusted PH to 7~8 with NaCO3. The precipitate was filtered and purified by silica gel column chromatography (PE = 100 %) to give the product (6 g, 77.08 %) as a yellow solid. ESI-MS (M+H) +: 162.2. Step 2: Preparation of tert-butyl (S)-4-(1-((2,4-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01596] To a mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2-methylpiperazine-1-carboxylate (200 mg, 0.63 mmol), 2,4-dimethylpyrazolo[1,5-a]pyridin- 5-amine (121 mg, 0.75 mmol) and TEA (762 mg, 7.55 mmol) in THF (20 mL) was added triphosgene (224 mg, 0.75 mmol) at 0 oC, the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered to afford title product (200 mg, 62.86 %) as a yellow solid. ESI-MS (M+H) +: 506.3.1H NMR (400 MHz, CDCl3) δ 11.75 (s, 1H), 8.19 (d, J = 7.5 Hz, 1H), 7.91 (d, J = 6.0 Hz, 1H), 7.69 (d, J = 7.6 Hz, 1H), 6.36 (d, J = 6.1 Hz, 1H), 6.17 (s, 1H), 4.36 – 4.35 (m, 1H), 4.21 – 4.14 (m, 2H), 3.97 – 3.95 (m, 1H), 3.53 (d, J = 11.7 Hz, 1H), 3.44 (d, J = 12.4 Hz, 1H), 3.24 – 3.23 (m, 1H), 3.15 – 3.07 (m, 3H), 2.96 – 2.94 (m, 1H), 2.46 (s, 3H), 2.43 (s, 3H), 1.49 (s, 9H), 1.31 (d, J = 6.7 Hz, 3H). Step 3: Preparation of (S)-N-(2,4-dimethylpyrazolo[1,5-a]pyridin-5-yl)-4-(3-methylpiperazin- 1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01597] A mixture of tert-butyl (S)-4-(1-((2,4-dimethylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1-carboxylate (200 mg, 0.39 mmol) in 4M HCl / EA (10 mL) was stirred at RT for 2 h. The precipitate was filtered and purified by prep-HPLC (0.1% NH3·H2O in H2O / ACN) to give title product (43.15 mg, yield: 27.32 %) as a yellow solid. ESI-MS (M+H) +: 406.2.1H NMR (400 MHz, DMSO-d6) δ 11.94 (s, 1H), 8.35 (d, J = 7.6 Hz, 1H), 7.89 (d, J = 6.1 Hz, 1H), 7.67 (d, J = 7.6 Hz, 1H), 6.51 (d, J = 6.2 Hz, 1H), 6.29 (s, 1H), 3.97 (t, J = 8.5 Hz, 2H), 3.58 (d, J = 11.9 Hz, 2H), 3.12 (t, J = 8.5 Hz, 2H), 2.91 (d, J = 11.0 Hz, 1H), 2.78 – 2.72 (m, 2H), 2.48 – 2.42 (m, 2H), 2.38 (s, 3H), 2.35 (s, 3H), 1.00 (d, J = 6.3 Hz, 3H). [01598] Example 548 – Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-hydroxy-2- methylimidazo[1,2-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000792_0001
Compound 548 Step 1: Preparation of tert-butyl (2R,6S)-4-(1-((7-hydroxy-2-methylimidazo[1,2-a]pyrimidin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperazine-1- carboxylate. [01599] A mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethylpiperazine-1-carboxylate (200 mg, 0.60 mmol), 7-methoxy-2- methylimidazo[1,2-a]pyrimidin-6-amine (128 mg, 0.72 mmol), triphosgene (214 mg, 0.72 mmol) and TEA (730 mg, 7.23 mmol) in THF (20 mL) was stirred at 0 oC for 15 min. Then the mixture was stirred at RT for 16 h. The mixture was diluted with water, stirred at r.t for 1 h. The precipitate was filtered and triturated with MeOH to afford title product (40 mg, yield: 12.72 %) as a gray solid ESI-MS (M+H) +: 523.3. Step 2: Preparation of 4-((3R,5S)-3,5-dimethylpiperazin-1-yl)-N-(7-hydroxy-2- methylimidazo[1,2-a]pyrimidin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01600] A mixture of tert-butyl (2R,6S)-4-(1-((7-hydroxy-2-methylimidazo[1,2- a]pyrimidin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperazine-1-carboxylate (30 mg, 0.06 mmol) in 4M HCl / EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and dried in vacuo to give title product (21 mg, yield: 76.42 %) as a yellow solid. ESI-MS (M+H) +: 423.1.1H NMR (400 MHz, D2O) δ 8.66 (s, 1H), 7.67 (d, J = 7.1 Hz, 1H), 7.01 (s, 1H), 6.68 (d, J = 7.3 Hz, 1H), 4.20 (t, J = 8.3 Hz, 2H), 4.10 (d, J = 14.0 Hz, 2H), 3.52 – 3.43 (m, 2H), 3.34 (t, J = 8.4 Hz, 2H), 3.14 (dd, J = 14.3, 11.7 Hz, 2H), 2.21 (d, J = 0.9 Hz, 3H), 1.31 (d, J = 6.6 Hz, 6H). Example 549 – Preparation of (S)-N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)-5-methyl-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000793_0001
Step 1: Preparation of 4-chloro-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [01601] A mixture of 4-chloro-5-methyl-1H-pyrrolo[2,3-b]pyridine (500 mg, 2.99 mmol) and Raney-Nickel (100 mg, 20%) in MeOH (30 mL) was stirred at 70oC for 16 h under H2. The mixture filtered and filtrate concentrated in vacuo and purified by silica gel column (PE: EA = 2: 1) to give title product (125 mg, Y: 24.7%) as a yellow solid. ESI-MS (M+H) +: 169.0. Step 2: Preparation of (S)-5-methyl-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine. [01602] A mixture of 4-chloro-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (250 mg, 1.48 mmol) and (S)-2-methylpiperazinein (445 mg, 2.22 mmol) in DIEA (0.3 mL) was stirred at 140oC for 72 h in a sealed tube. The mixture was concentrated in vacuo to give title product (300 mg, Y: 87.0%) as a yellow oil. ESI-MS (M+H) +: 233.2. Step 3: Preparation of tert-butyl tert-butyl (S)-2-methyl-4-(5-methyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate. [01603] A mixture of (S)-5-methyl-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H- pyrrolo[2,3-b]pyridine (300 mg, 1.29 mmol), Boc2O (280 mg, 1.29 mmol) and TEA (390 mg, 3.80 mmol) in DCM (10 mL) was stirred at 40oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (DCM: MeOH = 20: 1) to give title product (200 mg, Y: 46.6%) as a brown oil. ESI-MS (M+H) +: 333.1. Step 4: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin- 5-yl)carbamoyl)-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01604] To a mixture of tert-butyl (S)-2-methyl-4-(5-methyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (100 mg, 0.30 mmol), 6-methoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (82 mg, 0.46 mmol) and TEA (456 mg, 4.50 mmol) in THF (16 mL) was added triphosgene (107 mg, 0.36 mmol) at 0oC. The mixture was stirred at RT for 16 h. The mixture was concentrated in vacuo and purified by silica gel column (PE: EA = 1: 8) to give title product (80 mg, Y: 51.3%) as a yellow solid. ESI-MS (M+H) +: 537.4. Step 5: Preparation of (S)-N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-5- methyl-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01605] A mixture of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-5-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (70 mg,0.13 mmol) in 4M HCl/EA (5 mL) was stirred at r.t for 2 h. The mixture was concentrated in vacuo, the residue was purified by prep-HPLC (0.05% FA in water / CH3CN) to give title product (14.88 mg, 23.75%) as a white solid. ESI- MS (M+H) +:437.2.1H NMR (400 MHz, DMSO-d6) δ 12.00 (s, 1H), 8.66 (s, 1H), 8.34 (s, 1H), 8.14 (s, 1H), 7.91 (s, 1H), 4.06 (d, J = 7.1 Hz, 6H), 4.00 – 3.96 (m, 2H), 3.24 – 3.18 (m, 2H), 3.17 – 3.10 (m, 2H), 3.06 (t, J = 11.3 Hz, 2H), 2.97 – 2.72 (m, 3H), 2.16 (s, 3H), 1.08 (d, J = 6.0 Hz, 3H). Example 550 – Preparation of N-(2,8-dimethylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9- diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate.
Figure imgf000795_0001
Step 1: Preparation of tert-butyl 2-(1-((2,8-dimethylimidazo[1,2-a] pyridin-6-yl) carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9-carboxylate. [01606] To a solution of tert-butyl 2-(2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6- oxa-2,9-diazaspiro [4.5] decane-9-carboxylate (120 mg, 0.33 mmol) in THF (3 mL) was added DIEA (198 mg, 1.67 mmol), triphosgene (99 mg, 0.33 mmol) and 2,8- dimethylimidazo[1,2-a]pyridin-6-amine (80 mg, 0.5 mmol) at 0 °C. The reaction mixture was stirred at room temperature for 16 hours. The resulting mixture was diluted with H2O (80 mL) and extracted with EtOAc (50 mL x 2). The combined organic layers were dried over anhydrous Na2SO4. After filtration, the filtrate was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% FA in water / ACN) to afford tert-butyl 2-(1-((2,8-dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H- pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro[4.5]decane-9-carboxylate (52 mg, yield: 28%) as a yellow solid. ESI-MS (M+1) +: 548.2. Step 2: Preparation of N-(2,8-dimethylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2-yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate. [01607] To a mixture of tert-butyl 2-(1-((2,8-dimethylimidazo[1,2-a] pyridin-6-yl) carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridin-4-yl)-6-oxa-2,9-diazaspiro [4.5] decane-9- carboxylate (40 mg, 0.075 mmol) in DCM (1 mL) was added HCl/dioxane (1 mL, 6 mmol) dropwise at room temperature under nitrogen atmosphere. The reaction mixture was stirred at room temperature for 1 hours. The resulting mixture was concentrated under vacuum. The residue was purified by C18 column chromatography eluted with (0.05% FA in water / ACN) to afford N-(2,8-dimethylimidazo[1,2-a] pyridin-6-yl)-4-(6-oxa-2,9-diazaspiro [4.5] decan-2- yl)-2,3-dihydro-1H-pyrrolo[2,3-b] pyridine-1-carboxamide formate (10 mg, yield: 30%) as a yellow solid. ESI-MS (M+1) +: 448.3.1H NMR (400 MHz, CD3OD) δ 8.97 (d, J = 1.2 Hz, 1H), 8.32 (s, 1H), 7.81 (d, J = 6.1 Hz, 1H), 7.71 (d, J = 0.9 Hz, 1H), 7.32 (s, 1H), 6.21 (d, J = 6.2 Hz, 1H), 4.07 – 3.89 (m, 4H), 3.81 (d, J = 11.0 Hz, 1H), 3.75 – 3.59 (m, 4H), 3.46 – 3.34 (m, 2H), 3.27 (d, J = 12.9 Hz, 1H), 3.17 (t, J = 4.8 Hz, 2H), 2.55 (s, 3H), 2.46 (s, 3H), 2.41 – 2.33 (m, 1H), 2.04 (dt, J = 13.0, 8.9 Hz, 1H). Example 551 – Preparation of (S)-N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5- yl)-6-methyl-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide 2,2,2-trifluoroacetate.
Figure imgf000796_0001
Step 1: Preparation of 6-methyl-1H-pyrrolo[2,3-b]pyridine 7-oxide. [01608] To a mixture of 6-methyl-1H-pyrrolo[2,3-b]pyridine (23.0 g, 174.24 mmol) in EA (240 mL) was added m-CPBA (45.2 g, 261.36 mmol). The mixture was stirred at r.t for 16 h. The mixture was diluted with water (200 mL) and extracted with EA (200 mL*3). The combined organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to get title product (22.0 g, Y: 85.3 %) as a brown solid. ESI-MS (M+H) +:149.1.1H NMR (400 MHz, DMSO-d6) δ 12.30 (s, 1H), 7.54 (d, J = 8.0 Hz, 1H), 7.35 (d, J = 3.2 Hz, 1H), 7.11 (d, J = 8.1 Hz, 1H), 6.52 (d, J = 3.2 Hz, 1H), 3.36 (s, 3H). Step 2: Preparation of 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine. [01609] A solution of 6-methyl-1H-pyrrolo[2,3-b]pyridine 7-oxide (20.0 g, 135.14 mmol) in POCl3 (92 mL) was stirred at 90oC for 16 h. The mixture was concentrated in vacuo, the residue was diluted with water (100 mL) and adjust pH to 9 by NaHCO3 (aq). The mixture was extracted with EA (100 mL*3). The combined organic layer was washed with brine (300 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=1:1) to get title product (12.0 g, Y: 53.2 %) as a brown solid. ESI-MS (M+H) +:167.1. Step 3: Preparation of tert-butyl 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [01610] To a mixture of 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine (4.0 g, 23.95 mmol) in DCM (40 mL) were added TEA (7.3 g, 71.86 mmol), Boc2O (6.3 g, 28.74 mmol) at 0oC. The mixture was stirred at r.t for 3 h. The mixture was diluted with water (50 mL) and extracted with DCM (50 mL*3). The combined organic layer was washed with brine (100 mL), dried over sodium sulfate, filtered and concentrated in vacuo to get title product (2.2 g, Y: 34.4 %) as a brown solid which was used to the next step without further purification. ESI-MS (M+H) +:267.1. Step 4: Preparation of 4-chloro-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine. [01611] To a mixture of tert-butyl 4-chloro-6-methyl-1H-pyrrolo[2,3-b]pyridine-1- carboxylate (2.0 g, 7.49 mmol) in MeOH (20 mL) was added Raney-Ni (2 g). The mixture was stirred at 70oC for 16 h under Hydrogen atmosphere. The mixture was filtered and the filtrate was concentrated in vacuo, the residue was purified by flash chromatography (PE: EA= 4: 1) to get title product (200 mg, 15.8%) as a white solid. ESI-MS (M+H)+: 169.1. Step 5: Preparation of tert-butyl (S)-2-methyl-4-(6-methyl-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)piperazine-1-carboxylate. [01612] A mixture of 4-chloro-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (180 mg, 1.07 mmol), tert-butyl (S)-2-methylpiperazine-1-carboxylate (213 mg, 1.07 mmol) in DIEA (1 mL) was stirred at 140oC for 16 h in a sealed tube. The mixture was diluted with water (10 mL) and extracted with EA (10 mL*3). The combined organic layer was washed with brine (20 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The crude was purified by silica gel column chromatography (PE/EA=100:0 to 0:100, then DCM/MeOH = 100: 0 to 90: 10) to get title product (100 mg, Y: 28.3 %) as a yellow solid. ESI-MS (M+H) +:333.2. Step 6: Preparation of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin- 5-yl)carbamoyl)-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperazine-1- carboxylate. [01613] To a mixture of tert-butyl (S)-2-methyl-4-(6-methyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)piperazine-1-carboxylate (70 mg, 0.21 mmol), 6-methoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (45 mg, 0.25 mmol), TEA (319 mg, 3.16 mmol) in THF (10 mL) was added and triphosgene (75 mg, 0.25 mmol) at 0oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (20 mL) and the precipitate was filtered, triturated with MeOH (5 mL) to get title product (25 mg, Y: 22.1 %) as a white solid. ESI-MS (M+H) +:537.2. Step 7: Preparation of (S)-N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-6- methyl-4-(3-methylpiperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01614] To a solution of tert-butyl (S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-6-methyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperazine-1-carboxylate (15 mg, 0.03 mmol) in EA (1 mL) was added 4M HCl/EA (1 mL). The reaction mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.03% TFA in water / ACN) to give title compound (6.95 mg, 45.2 %) as a white solid. ESI-MS (M+H)+:437.3.1H NMR (400 MHz, MeOD-d4) δ 8.71 (s, 1H), 7.99 (s, 1H), 6.45 (s, 1H), 4.13 (s, 3H), 4.11 – 4.05 (m, 5H), 3.79 – 3.72 (m, 2H), 3.49 – 3.44 (m, 2H), 3.28 – 3.21 (m, 1H), 3.19 – 3.12 (m, 1H), 3.06 (t, J = 8.5 Hz, 2H), 2.95 (dd, J = 13.6, 10.4 Hz, 1H), 2.52 (s, 3H), 1.39 (d, J = 6.6 Hz, 3H).
Example 552 – Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide diformate.
Figure imgf000799_0001
Step 1: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(((trifluoromethyl)sulfonyl)oxy)-3,6- dihydropyridine-1(2H)-carboxylate. [01615] To a mixture of tert-butyl (2R,6S)-2,6-dimethyl-4-oxopiperidine-1- carboxylate (2 g, 8.81 mmol) in THF (20 mL) was added LiHMDS (10.6 mL,10.6 mmol, 1M) at -78 oC, the reaction mixture was stirred at -78 oC for 0.5 h. Then N,N- phenylbistrifluoromethane-sulfonimide (3.5 g, 9.69 mmol ) was added to the mixture and stirred at RT for 2 h. The mixture was concentrated in vacuo. The residue was purified by flash chromatography on silica gel eluting with EA: PE (1: 9) to give title product (1.5 g, 47.5 %) as a yellow oil.1H NMR (400 MHz, DMSO-d6) δ 6.02 – 5.99 (m, 1H), 4.68 – 4.60 (m, 1H), 4.55 – 4.47 (m, 1H), 2.76 – 2.67 (m, 1H), 2.16 (d, J = 16.9 Hz, 1H), 1.43 (s, 9H), 1.27 (d, J = 6.9 Hz, 3H), 1.16 (d, J = 7.0 Hz, 3H). Step 2: Preparation of tert-butyl (2R,6S)-2,6-dimethyl-4-(4,4,5,5-tetramethyl-1,3,2- dioxaborolan-2-yl)-3,6-dihydropyridine-1(2H)-carboxylate. [01616] To a solution of tert-butyl (2R,6S)-2,6-dimethyl-4- (((trifluoromethyl)sulfonyl)oxy)-3,6-dihydropyridine-1(2H)-carboxylate (1.5 g, 4.18 mmol) in 1,4-dioxane (30 mL) were added B2Pin2 (1.3 g, 5.01 mmol), Pd(dppf)Cl2 (340 mg, 0.042 mmol) and KOAc (1.2 g, 12.54 mmol). The mixture was charged with N2 for three times and stirred at 90 °C for 16 h. The reaction mixture was concentrated in vacuo. The residue was purified by flash chromatography on silica gel eluting with EA: PE= (1: 9) to give title product (1 g, 70.9 %) as a yellow oil.1H NMR (400 MHz, DMSO-d6) δ 6.36 – 6.32 (m, 1H), 4.46 – 4.36 (m, 1H), 4.25 – 4.18 (m, 1H), 2.20 – 2.11 (m, 1H), 2.03 – 1.98 (m, 1H), 1.41 (s, 9H), 1.21 (s, 12H), 1.17 – 1.16 (m, 6H). Step 3: Preparation of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethyl-3,6-dihydropyridine-1(2H)-carboxylate. [01617] To a solution of 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (490 mg, 2.48 mmol) in 1,4-dioxane : H2O (20 mL:3.5 mL) were added tert-butyl (2R,6S)-2,6- dimethyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-3,6-dihydropyridine-1(2H)- carboxylate (1 g, 2.97 mmol), Pd(dppf)Cl2 (242 mg, 0.248 mmol) and K2CO3 (1 g, 7.424 mmol). The mixture was charged with N2 for three times and stirred at 85 °C for 16 h. The mixture was concentrated in vacuo. The residue was purified by flash chromatography on silica gel eluting with EA: PE= (5: 1) to give title product (220 mg, 27 %) as a yellow solid. ESI-MS (M+H) +: 330.2.1 H NMR (400 MHz, DMSO-d6) δ 7.65 (d, J = 5.6 Hz, 1H), 6.37 (d, J = 5.7 Hz, 1H), 5.87 – 5.86 (m, 1H), 4.62 – 4.51 (m, 1H), 4.42 – 4.33 (m, 1H), 3.49 – 3.46 (m, 2H), 3.12 – 3.03 (m, 2H), 2.63 – 2.55 (m, 1H), 2.14 (d, J = 16.5 Hz, 1H), 1.44 (s, 9H), 1.28 (d, J = 6.8 Hz, 3H), 1.12 (d, J = 6.9 Hz, 3H). Step 4: Preparation of tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperidine-1-carboxylate. [01618] A mixture of tert-butyl (2R,6S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,6-dimethyl-3,6-dihydropyridine-1(2H)-carboxylate (50 mg, 0.152 mmol) and Pd/C (10 mg, 10 % w.t) in MeOH (10 mL) was stirred at RT for 6 h under H2. The reaction mixture was filtered and the filtrate was concentrated under reduced pressure to give title product (30 mg, 59.6 %) as a yellow solid. ESI-MS (M+H) +: 332.3.1 H NMR (400 MHz, DMSO-d6) δ 7.63 (d, J = 5.6 Hz, 1H), 6.51 – 6.40 (m, 1H), 6.39 – 6.35 (m, 1H), 4.27 (s, 1H), 4.19 – 4.10 (m, 1H), 3.51 – 3.44 (m, 2H), 3.04 – 2.97 (m, 2H), 2.11 – 2.02 (m, 1H), 1.75 – 1.67 (m, 1H), 1.60 – 1.55 (m, 1H), 1.51 – 1.45 (m, 2H), 1.43 – 1.41 (m, 9H), 1.25 – 1.19 (m, 6H). Step 5: Preparation of tert-butyl (2S,6R)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin- 6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperidine-1- carboxylate. [01619] A mixture of 7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-amine (32 mg, 0.189 mmol), triphosgene (54 mg, 0.181 mmol) and TEA (183 mg, 1.813 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,6-dimethylpiperidine-1-carboxylate (50 mg, 0.151 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo to afford title product (40 mg, crude) as a brown solid. ESI-MS (M+H) +: 537.4. Step 6: Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide diformate. [01620] A mixture of tert-butyl (2S,6R)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperidine-1-carboxylate (40 mg, 0.075 mmol) in 4M HCl / EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep- HPLC (0.1% FA in H2O / ACN) to give title product (9 mg, 22.8 %) as a white solid. ESI- MS (M+H) +: 437.4.1H NMR (400 MHz, DMSO-d6) δ 9.10 (d, J = 6.7 Hz, 1H), 8.33 (s, 2H), 8.14 – 8.06 (m, 1H), 7.56 (s, 1H), 7.05 – 6.85 (m, 1H), 4.17 – 4.08 (m, 2H), 3.50 – 3.32 (m, 3H), 3.22 – 3.12 (m, 2H), 2.44 (s, 3H), 2.39 (s, 3H), 2.26 (d, J = 15.0 Hz, 1H), 2.11 – 2.01 (m, 1H), 1.99 – 1.86 (m, 1H), 1.72 – 1.58 (m, 1H), 1.43 – 1.32 (m, 6H). Example 553 – Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4- ((2S)-2-methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000801_0001
Step 1: Preparation of tert-butyl (S)-6-methyl-4-(((trifluoromethyl)sulfonyl)oxy)-3,6- dihydropyridine-1(2H)-carboxylate. [01621] To a mixture of tert-butyl (S)-2-methyl-4-oxopiperidine-1-carboxylate (10 g, 0.047 mol) in THF (100 mL) was added LiHMDS (56 mL,0.056 mol, 1M) at -78 oC, the reaction mixture was stirred at -78 oC for 0.5 h. Then N,N-phenylbistrifluoromethane- sulfonimide (18.4 g, 0.052 mol ) was added to the mixture and stirred at RT for 2 h. The mixture was diluted with water (50 mL), extracted with EA (100 mL), the organic layer was concentrated in vacuo. The residue was purified by flash chromatography on silica gel eluting with EA: PE (1: 9) to give title product (9 g, 55.6 %) as a yellow oil. Step 2: Preparation of tert-butyl (S)-6-methyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2- yl)-3,6-dihydropyridine-1(2H)-carboxylate. [01622] To a solution of tert-butyl (S)-6-methyl-4-(((trifluoromethyl)sulfonyl)oxy)- 3,6-dihydropyridine-1(2H)-carboxylate (7 g, 0.02 mol) in 1,4-dioxane (80 mL) were added B2Pin2 (6.2 g, 0.024 mol), Pd(dppf)Cl2 (1.7 g,0.002 mol) and AcOK (6 g, 0.061 mol). The mixture was charged with N2 for three times and stirred at 90 °C for 16 h. The reaction mixture was concentrated in vacuo. The residue was purified by flash chromatography on silica gel eluting with EA: PE= (1: 9) to give title product (5 g, 76.3 %) as a yellow oil. ESI- MS (M+H-Boc) +: 224.2. Step 3: Preparation of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6-methyl- 3,6-dihydropyridine-1(2H)-carboxylate. [01623] To a solution of 4-bromo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine (817 mg, 4.12 mmol) in 1,4-dioxane : H2O (20 mL:3 mL) were added tert-butyl (S)-6-methyl-4- (4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-3,6-dihydropyridine-1(2H)-carboxylate (2 g, 6.19 mmol), Pd(dppf)Cl2 (337 mg, 0.41mmol) and K2CO3 (1.7 g, 12.32 mmol). The mixture was charged with N2 for three times and stirred at 85 °C for 16 h. The mixture was concentrated in vacuo. The residue was purified by flash chromatography on silica gel eluting with EA: PE= (1: 3) to give title product (700 mg, 53.9 %) as a yellow solid. ESI-MS (M+H) +: 316.1.1H NMR (400 MHz, DMSO-d6) δ 7.65 (d, J = 5.5 Hz, 1H), 6.37 – 6.32 (m, 1H), 4.52 – 4.40 (m, 1H), 4.10 – 3.98 (m, 1H), 3.46 – 3.39 (m, 3H), 3.12 – 2.95 (m, 3H), 2.53 – 2.49 (m, 1H), 2.24 – 2.09 (m, 1H), 1.49 – 1.37 (m, 9H), 1.21 – 1.06 (m, 3H). Step 4: Preparation of tert-butyl (2S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperidine-1-carboxylate. [01624] A mixture of tert-butyl (S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-6- methyl-3,6-dihydropyridine-1(2H)-carboxylate (50 mg, 0.16 mmol) and Pd/C(10 mg, 20 % Wt) in MeOH (10 mL) was stirred at RT for 5 h under H2. The reaction mixture was filtered over Celite. The filtrate was concentrated under reduced pressure to give title product (30 mg, 59.6 %) as a yellow solid. ESI-MS (M+H) +: 318.2. Step 5: Preparation of tert-butyl (2S)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate. [01625] A mixture of 7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-amine (34 mg, 0.189 mmol), triphosgene (56 mg, 0.189 mmol) and TEA (191 mg, 1.893 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (2S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate (50 mg, 0.158 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo to afford title product (20 mg, crude) as a brown solid. ESI-MS (M+H) +: 523.4. Step 6: Preparation of N-(7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-4-((2S)-2- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01626] A mixture of tert-butyl (2S)-4-(1-((7-fluoro-2,8-dimethylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1- carboxylate (50 mg, 0.096 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (1.67 mg, 3.7 %) as a white solid. ESI-MS (M+H) +: 423.2. 1H NMR (400 MHz, MeOD-d4) δ 9.07 (d, J = 6.8 Hz, 1H), 8.38 (s, 1H), 8.14 – 8.07 (m, 1H), 7.54 (s, 1H), 6.96 – 6.84 (m, 1H), 4.22 – 4.10 (m, 2H), 3.56 – 3.35 (m, 2H), 3.26 – 3.18 (m, 3H), 3.17 – 2.98 (m, 1H), 2.46 (s, 3H), 2.39 (s, 3H), 2.15 – 2.01 (m, 2H), 1.99 – 1.64 (m, 2H), 1.46 (dd, J = 54.2, 6.7 Hz, 3H).
Example 554 – Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(6-methoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000804_0001
Step 1: Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01627] To a solution of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (52 mg, 0.29 mmol) in THF (10 mL) were added TEA (299 mg, 2.96 mmol) and triphosgene (86 mg, 0.29 mmol) at 0oC. After 10 min, tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,6-dimethylpiperidine-1-carboxylate (80 mg, 0.24 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (30 mL). The precipitate was filtered and concentrated in vacuo to give the compound (40 mg, 31%) as a brown solid. ESI-MS (M+H) +:536.4. Step 2: Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01628] To a mixture of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(6-methoxy-2- methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide (30 mg, 0.06 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (8.68 mg, 33 %) as a white solid. ESI-MS (M+H) +:436.4.1H NMR (400 MHz, DMSO-d6) δ 11.89 (d, J = 10.9 Hz, 1H), 8.67 (d, J = 2.5 Hz, 1H), 8.37 (s, 1H), 8.19 – 8.11 (m, 2H), 6.96 – 6.86 (m, 1H), 4.06 (d, J = 8.1 Hz, 8H), 3.26 – 3.11 (m, 2H), 3.08 – 2.76 (m, 3H), 1.96 (d, J = 12.8 Hz, 1H), 1.74 (d, J = 13.2 Hz, 1H), 1.69 – 1.59 (m, 1H), 1.47 – 1.29 (m, 1H), 1.19 – 1.06 (m, 6H). Example 555 – Preparation of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)- 4-((2S)-2-methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000805_0001
Step 1: Preparation of tert-butyl (2S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin- 5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1- carboxylate. [01629] To a solution of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (100 mg, 0.32 mmol) and TEA (383 mg, 3.79 mmol) in THF (10 mL) was added triphosgene (113 mg, 0.38 mmol) at 0oC, after 10 min, tert-butyl (2S)-4-(2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate (100 mg, 0.32 mmol) was added at the mixture and stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and concentrated in vacuo to give the compound (70 mg, 42%) as a brown solid. ESI-MS (M+H) +:522.3. Step 2: Preparation of N-(6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-4-((2S)-2- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01630] To a mixture of tert-butyl (2S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1- carboxylate (50 mg, 0.10 mmol) in EA (1 mL) was added 4M HCl / EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (11.39 mg, 24 %) as a yellow solid. ESI-MS (M+H) +:422.2.1H NMR (400 MHz, DMSO-d6) δ 11.90 (d, J = 5.7 Hz, 1H), 8.68 (s, 1H), 8.36 (s, 1H), 8.18 – 8.13 (m, 2H), 6.93 – 6.83 (m, 1H), 4.11 – 4.06 (m, 5H), 4.05 (s, 3H), 3.17 – 3.12 (m, 4H), 3.07 – 2.98 (m, 2H), 2.94 – 2.71 (m, 2H), 1.70 (d, J = 16.5 Hz, 1H), 1.61 (d, J = 12.8 Hz, 1H), 1.19 (d, J = 73.5 Hz, 3H). Example 556 – Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-((2S)-2- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate .
Figure imgf000806_0001
Step 1: Preparation of tert-butyl (2S)-4-(1-((6-fluoro-2-methyl-2H-indazol-5-yl)carbamoyl)- 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate. [01631] A mixture of 6-fluoro-2-methyl-2H-indazol-5-amine (31 mg, 0.189 mmol), triphosgene (56 mg, 0.189 mmol) and TEA (191 mg, 1.893 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (2S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2- methylpiperidine-1-carboxylate (50 mg, 0.158 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo to afford title product (45 mg, crude) as a brown solid. ESI-MS (M+H) +: 509.3. H NMR (400 MHz, DMSO-d6) δ 11.74 – 11.68 (m, 1H), 8.44 (d, J = 7.9 Hz, 1H), 8.31 (s, 1H), 8.11 – 8.03 (m, 1H), 7.46 (d, J = 12.0 Hz, 1H), 6.94 – 6.88 (m, 1H), 4.15 – 4.09 (m, 5H), 3.32 – 3.27 (m, 2H), 3.18 – 2.92 (m, 3H), 1.79 – 1.64 (m, 2H), 1.63 – 1.47 (m, 3H), 1.42 (s, 9H), 1.23 – 1.14 (m, 3H). Step 2: Preparation of N-(6-fluoro-2-methyl-2H-indazol-5-yl)-4-((2S)-2-methylpiperidin-4- yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01632] A mixture of tert-butyl (2S)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate (40 mg,0.079 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (17 mg, 47.6 %) as a white solid. ESI-MS (M+H) +: 409.1.1H NMR (400 MHz, DMSO-d6) δ 11.72 (s, 1H), 8.44 (d, J = 7.9 Hz, 1H), 8.39 (s, 1H), 8.32 (s, 1H), 8.11 – 8.05 (m, 1H), 7.46 (d, J = 12.2 Hz, 1H), 6.91 – 6.84 (m, 1H), 4.14 – 4.05 (m, 5H), 3.17 – 3.11 (m, 3H), 3.08 – 2.94 (m, 3H), 1.95 – 1.80 (m, 1H), 1.79 – 1.56 (m, 3H), 1.18 (dd, J = 73.1, 6.1 Hz, 3H). [01633] Example 557 – Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4- ((2S)-2-methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide.
Figure imgf000807_0001
Step 1: Preparation of tert-butyl (2S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate. [01634] To a solution of 6-methoxy-2-methylpyrazolo[1,5-a]pyridine-5-carboxylic acid (78 mg, 0.38 mmol) and TEA (101 mg, 1.00 mmol) in tol (5 mL) was added DPPA (192 mg, 0.70 mmol) at 30 oC, the mixture was stirred at r.t for 0.5h and 60 oC for 0.5 h. Tert-butyl (2S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate (80 mg, 0.25 mmol) was added to the mixture and stirred at 90 oC for 16 h. The mixture was concentrated in vacuo and purified by silica gel column chromatography (EA: PE= 70 %) to give title product (60 mg, yield: 46.06 %) as a white solid. ESI-MS (M+H) +: 521.3. Step 2: Preparation of N-(6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-4-((2S)-2- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide. [01635] A mixture of tert-butyl (2S)-4-(1-((6-methoxy-2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1- carboxylate (50 mg, 0.09 mmol) in 4M HCl /EA (2 mL) was stirred at RT for 2 h. The precipitate was filtered and diluted with water (2 mL), adjusted pH to 7~8 by 1N Na2CO3. The precipitate was filtered, washed with water (10 mL) and dried in vacuo to give title product (20.01 mg, yield: 52.93 %) as a white solid. ESI-MS (M+H) +: 421.2.1H NMR (400 MHz, DMSO-d6) δ 12.06 (d, J = 5.9 Hz, 1H), 8.31 (s, 1H), 8.24 (s, 1H), 8.14 (t, J = 5.2 Hz, 1H), 6.88 (dd, J = 7.9, 5.7 Hz, 1H), 6.18 (s, 1H), 4.07 (t, J = 7.9 Hz, 2H), 3.97 (s, 3H), 3.17 – 2.98 (m, 5H), 2.85 – 2.75 (m, 1H), 2.31 (s, 3H), 2.03 – 1.42 (m, 4H), 1.32 – 1.11 (m, 3H). Example 558 – Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((2S)- 2-methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate.
Figure imgf000808_0001
Step 1: Preparation of tert-butyl (2S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate. [01636] A mixture of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (62 mg, 0.379 mmol), triphosgene (112 mg, 0.379 mmol) and TEA (382 mg, 3.785 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl (2S)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin- 4-yl)-2-methylpiperidine-1-carboxylate (100 mg, 0.315 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo to afford title product (60 mg, crude) as a brown solid. ESI-MS (M+H) +: 509.3. Step 2: Preparation of N-(7-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl)-4-((2S)-2- methylpiperidin-4-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01637] A mixture of tert-butyl (2S)-4-(1-((7-fluoro-2-methylimidazo[1,2-a]pyridin-6- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1-carboxylate (40 mg, 0.079 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated in vacuo and the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (20 mg, 55.9 %) as a brown solid. ESI-MS (M+H) +: 409.4.1H NMR (400 MHz, DMSO-d6) δ 11.62 (s, 1H), 9.20 (d, J = 7.4 Hz, 1H), 8.25 (s, 1H), 8.11 (d, J = 5.4 Hz, 1H), 7.73 (s, 1H), 7.43 (d, J = 11.6 Hz, 1H), 6.87 (dd, J = 9.5, 5.6 Hz, 1H), 4.09 (t, J = 8.6 Hz, 2H), 3.70 – 3.69 (m, 1H), 3.39 – 3.29 (m, 1H), 3.19 – 3.13 (m, 3H), 3.02 – 2.91 (m, 1H), 2.29 (s, 3H), 2.06 – 1.80 (m, 3H), 1.75 – 1.58 (m, 1H), 1.40 – 1.21 (m, 3H). Example 559 – Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(6-fluoro-2- methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2- trifluoroacetate.
Figure imgf000809_0001
Step 1: Preparation of tert-butyl (2S,6R)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperidine-1- carboxylate. [01638] To a solution of 6-fluoro-2-methyl-2H-indazol-5-amine (48 mg, 0.29 mmol) in THF (10 mL) were added TEA (299 mg, 2.90 mmol) and triphosgene (86 mg, 0.29 mmol) at 0oC. After 10 min, tert-butyl (2S,6R)-4-(2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6- dimethylpiperidine-1-carboxylate (80 mg, 0.24 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (30 mL). The precipitate was filtered and concentrated in vacuo to give the compound (100 mg, 80%) as a pink solid. ESI-MS (M+H) +:523.1.1H NMR (400 MHz, DMSO-d6) δ 11.72 (s, 1H), 8.44 (d, J = 7.9 Hz, 1H), 8.32 (s, 1H), 8.07 (d, J = 5.5 Hz, 1H), 7.46 (d, J = 11.8 Hz, 1H), 6.96 – 6.90 (m, 1H), 4.36 – 4.26 (m, 1H), 4.21 – 4.15 (m, 1H), 4.12 (s, 3H), 4.07 (dd, J = 14.1, 8.7 Hz, 2H), 3.21 (d, J = 8.4 Hz, 1H), 3.20 – 3.12 (m, 2H), 2.18 – 2.09 (m, 1H), 1.82 – 1.74 (m, 1H), 1.65 (d, J = 12.1 Hz, 1H), 1.61 – 1.54 (m, 1H), 1.43 (d, J = 2.4 Hz, 9H), 1.25 (t, J = 6.1 Hz, 6H). Step 2: Preparation of 4-((2S,6R)-2,6-dimethylpiperidin-4-yl)-N-(6-fluoro-2-methyl-2H- indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide 2,2,2-trifluoroacetate. [01639] To a mixture of tert-butyl (2S,6R)-4-(1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,6-dimethylpiperidine-1- carboxylate (80 mg, 0.15 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% TFA in H2O / ACN) to give title product (60 mg, 95 %) as a white solid. ESI-MS (M+H) +:423.4.1H NMR (400 MHz, DMSO-d6) δ 11.70 (d, J = 2.9 Hz, 1H), 8.88 – 8.55 (m, 1H), 8.44 (d, J = 7.9 Hz, 1H), 8.32 (s, 1H), 8.29 – 8.13 (m, 1H), 8.11 (d, J = 5.5 Hz, 1H), 7.47 (d, J = 12.1 Hz, 1H), 6.95 – 6.83 (m, 1H), 4.12 (s, 3H), 4.11 – 4.05 (m, 2H), 3.47 – 2.93 (m, 5H), 2.14 (d, J = 14.5 Hz, 1H), 1.94 (d, J = 13.5 Hz, 1H), 1.81 (t, J = 10.7 Hz, 1H), 1.57 (q, J = 12.8 Hz, 1H), 1.32 – 1.18 (m, 6H). Example 560 – Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro- 2,8-dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide formate.
Figure imgf000810_0001
Compound 560 Step 1: Preparation of tert-butyl (2-(2,6-dichloro-4-iodopyridin-3-yl)ethyl)carbamate. [01640] To a solution of 2,6-dichloro-4-iodopyridine (50 g, 183 mmol) in THF (500 mL) was added LDA (137 mL, 275 mmol, 2.0 M in THF) dropwise at -65oC, the reaction mixture was stirred at -65oC for 1h, then tert-butyl 1,2,3-oxathiazolidine-3-carboxylate 2,2- dioxide (61.3 g, 275 mmol) was added to the mixture and stirred at r.t overnight. The mixture was quenched with sat. NH4Cl (500 mL) and stirred at r.t for 4 h. Then extracted with EA (500 mL*2), the combined organic layer was washed with brine (800 mL), dried over sodium sulfate, filtered and concentrated in vacuo. The residue was triturated with PE/EA=2:1 (500 mL) to give title product (29 g, 38.2%) as a yellow solid. ESI-MS (M+H) +:417.0. Step 2: Preparation of tert-butyl 6-chloro-4-iodo-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxylate. [01641] A mixture tert-butyl (2-(2,6-dichloro-4-iodopyridin-3-yl)ethyl)carbamate (4.3 g, 10.3 mmol) in THF (90 mL) was added NaH (1.65 g, 41.2 mmol) at 0oC. The mixture was stirred at 50 oC for 3 h. The mixture was diluted with sat. NH4Cl (50 mL), extracted with DCM (50 mL*3). The organic layer was concentrated in vacuo and purified by silica gel column (PE: EA= 2: 1) to give title product (2.1 g, 53.4%) as a white solid. ESI-MS (M+H) +:381.2. Step 3: Preparation of tert-butyl 4-(4-(tert-butoxycarbonyl)-3,3-dimethylpiperazin-1-yl)-6- chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [01642] A mixture of tert-butyl 6-chloro-4-iodo-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxylate (2.1 g, 5.51 mmol), tert-butyl 2,2-dimethylpiperazine-1-carboxylate (1.77 g, 8.27 mmol), Cs2CO3 (5.37 g, 16.54 mmol), Xantphos (646 mg, 1.10 mmol) and Pd2(dba)3 (504 mg, 0.55 mmol) in 1,4-dioxane (30 mL) was stirred at 80 oC for 16 h under N2. The mixture was concentrated in vucuo, and the residue was purified by silica gel column (PE: EA= 3: 1) to give title product (1.5 g, 58%) as a yellow solid. ESI-MS (M+H) +:467.1. Step 4: Preparation of tert-butyl 4-(4-(tert-butoxycarbonyl)-3,3-dimethylpiperazin-1-yl)-6- cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate. [01643] A mixture of tert-butyl 4-(4-(tert-butoxycarbonyl)-3,3-dimethylpiperazin-1- yl)-6-chloro-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (1.5 g, 3.21 mmol), cyclopropylboronic acid (1381 mg, 16 mmol), K3PO4 (3405 mg, 16 mmol), Pcy3 (270 mg, 0.96 mmol) and Pd(OAc)2 (144 mg, 0.64 mmol) in Toluene (20 mL) and H2O (2 mL) was stirred at 130oC for 2 h under N2 in a sealed tube. The mixture was cooled down to r.t and concentrated in vacuo. The residue was purified by silica gel column (PE: EA= 3: 1) to give title product (1.3 g, 86%) as a white solid. ESI-MS (M+H) +:473.3.1H NMR (400 MHz, DMSO-d6) δ 6.32 (s, 1H), 3.77 (t, J = 8.3 Hz, 2H), 3.66 – 3.61 (m, 2H), 3.41 (t, J = 5.4 Hz, 2H), 3.34 (s, 2H), 3.04 (t, J = 8.3 Hz, 2H), 1.92 – 1.83 (m, 1H), 1.46 (s, 9H), 1.42 (s, 9H), 1.36 (s, 6H), 0.88 (s, 2H), 0.76 (dd, J = 7.8, 2.9 Hz, 2H). Step 5: Preparation of 6-cyclopropyl-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine hydrochloride. [01644] To a solution of tert-butyl 4-(4-(tert-butoxycarbonyl)-3,3-dimethylpiperazin-1- yl)-6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (1.3 g, 2.75 mmol) in EA (4 mL) was added 4M HCl/EA (12 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated in vacuo to give title compound (750 mg, 99 %) as a yellow solid. ESI-MS (M+H) +:273.2. Step 6: Preparation of tert-butyl 4-(6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4- yl)-2,2-dimethylpiperazine-1-carboxylate. [01645] To a solution 6-cyclopropyl-4-(piperazin-1-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine hydrochloride (750 mg, 2.76 mmol) in DCM (30 mL) were added TEA (1394 mg, 13.8 mmol) and Boc2O (661 mg, 3.03 mmol) at 0oC. Then DMAP (34 mg, 0.28 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was concentrated in vacuo, and the residue was purified by silica gel column (PE: EA= 1:4) to give title compound (550 mg, 53 %) as a yellow solid. ESI-MS (M+H) +:373.3.1H NMR (400 MHz, DMSO-d6) δ 5.94 (s, 1H), 5.66 (s, 1H), 3.65 – 3.58 (m, 2H), 3.40 – 3.36 (m, 2H), 3.29 (d, J = 8.8 Hz, 4H), 3.01 (t, J = 8.4 Hz, 2H), 1.79 – 1.71 (m, 1H), 1.42 (s, 9H), 1.35 (s, 6H), 0.77 – 0.66 (m, 4H). Step 7: Preparation of tert-butyl 4-(6-cyclopropyl-1-((7-fluoro-2,8-dimethylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [01646] To a solution of 7-fluoro-2,8-dimethylimidazo[1,2-a]pyridin-6-amine (58 mg, 0.32 mmol) in THF (10 mL) were added TEA (325 mg, 3.22 mmol) and triphosgene (95 mg, 0.32 mmol) at 0oC. After 10 min, tert-butyl 4-(6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (100 mg, 0.27 mmol) was added at 0 oC. The mixture was stirred at r.t for 16 h. The mixture was diluted with water (30 mL). The precipitate was filtered and triturated with MeOH (5 mL) to give the compound (150 mg, 96%) as a pink solid. ESI-MS (M+H) +:578.3.1H NMR (400 MHz, DMSO-d6) δ 11.58 (s, 1H), 9.09 (d, J = 7.1 Hz, 1H), 7.68 (s, 1H), 6.33 (s, 1H), 3.99 – 3.91 (m, 2H), 3.71 – 3.66 (m, 2H), 3.58 – 3.53 (m, 2H), 3.51 (s, 2H), 3.22 (t, J = 8.5 Hz, 2H), 2.39 (d, J = 2.0 Hz, 3H), 2.29 (s, 3H), 2.02 – 1.96 (m, 1H), 1.43 (s, 9H), 1.38 (s, 6H), 0.99 – 0.90 (m, 4H). Step 8: Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01647] To a mixture of tert-butyl 4-(6-cyclopropyl-1-((7-fluoro-2,8- dimethylimidazo[1,2-a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2,2-dimethylpiperazine-1-carboxylate (130 mg, 0.23 mmol) in EA (2 mL) was added 4M HCl/EA (6 mL). The mixture was stirred at r.t for 2 h. The mixture was concentrated under reduced pressure, the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (91 mg, 82 %) as a white solid. ESI-MS (M+H) +:478.4.1H NMR (400 MHz, DMSO-d6) δ 11.41 (s, 1H), 9.10 (d, J = 7.2 Hz, 1H), 8.15 (s, 1H), 7.69 (s, 1H), 6.51 (s, 1H), 3.99 (t, J = 8.4 Hz, 2H), 3.35 (d, J = 3.2 Hz, 2H), 3.17 (s, 2H), 3.16 – 3.11 (m, 2H), 3.07 (t, J = 8.5 Hz, 2H), 2.39 (s, 3H), 2.29 (s, 3H), 2.07 – 1.98 (m, 1H), 1.28 (s, 6H), 0.96 (d, J = 8.2 Hz, 4H). Example 561 – Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro- 2-methyl-2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride.
Figure imgf000813_0001
Step 1: Preparation of tert-butyl 4-(6-cyclopropyl-1-((6-fluoro-2-methyl-2H-indazol-5- yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1- carboxylate. [01648] To a solution of 6-fluoro-2-methyl-2H-indazol-5-amine (53 mg, 0.32 mmol) in THF (10 mL) were added TEA (325 mg, 3.22 mmol) and triphosgene (95 mg, 0.32 mmol) at 0oC. After 10 min, tert-butyl 4-(6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2,2-dimethylpiperazine-1-carboxylate (100 mg, 0.27 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was diluted with water (45 mL). The precipitate was filtered and concentrated in vacuo to give the compound (100 mg, 66 %) as a white solid. ESI-MS (M+H) +:564.3.1H NMR (400 MHz, DMSO-d6) δ 11.58 (s, 1H), 8.43 (d, J = 8.0 Hz, 1H), 8.30 (s, 1H), 7.48 (d, J = 12.3 Hz, 1H), 6.34 (s, 1H), 4.12 (s, 3H), 3.98 – 3.92 (m, 2H), 3.71 – 3.67 (m, 2H), 3.56 – 3.53 (m, 2H), 3.51 (s, 2H), 3.23 – 3.16 (m, 2H), 2.14 – 1.83 (m, 1H), 1.43 (s, 9H), 1.38 (s, 6H), 0.93 (dd, J = 22.4, 5.6 Hz, 4H). Step 2: Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(6-fluoro-2-methyl- 2H-indazol-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01649] To a mixture of tert-butyl (2S)-4-(1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2-methylpiperidine-1- carboxylate (80 mg, 0.14 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The mixture was stirred at r.t for 2 h. The precipitate was filtered and washed with EA (3 mL) and lyophilized to give title product (66 mg, 79 %) as an orange solid. ESI-MS (M+H) +:464.3.1H NMR (400 MHz, DMSO-d6) δ 11.41 (s, 1H), 9.49 (s, 2H), 8.44 (d, J = 7.1 Hz, 1H), 8.32 (s, 1H), 7.49 (d, J = 12.3 Hz, 1H), 6.54 (s, 1H), 4.12 (s, 3H), 4.01 (t, J = 8.3 Hz, 2H), 3.49 (s, 2H), 3.29 (s, 2H), 3.23 (s, 2H), 3.08 (t, J = 8.3 Hz, 2H), 2.10 – 2.01 (m, 1H), 1.40 (s, 6H), 1.02 – 0.92 (m, 4H). Example 562 – Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(6- methoxy-2-methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine- 1-carboxamide formate.
Figure imgf000814_0001
Compound 562 Step 1: Preparation of tert-butyl 4-(6-cyclopropyl-1-((6-methoxy-2-methylpyrazolo[1,5- a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [01650] A mixture of 6-methoxy-2-methylpyrazolo[1,5-a]pyridin-5-amine (29 mg, 0.161 mmol), triphosgene (48 mg, 0.161 mmol) and TEA (163 mg, 1.613 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl 4-(6-cyclopropyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (50 mg, 0.134 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3). The organic layer was concentrated in vacuo. The residue was triturated with MeOH (3 mL) to afford title product (25 mg, 32.3 %) as a white solid. ESI-MS (M+H) +: 576.1.1H NMR (400 MHz, DMSO-d6) δ 11.50 (s, 1H), 8.29 (d, J = 7.9 Hz, 2H), 6.25 (s, 1H), 6.16 (s, 1H), 3.97 – 3.90 (m, 5H), 3.71 – 3.64 (m, 2H), 3.56 – 3.46 (m, 4H), 3.22 – 3.15 (m, 2H), 2.31 (s, 3H), 2.07 – 1.97 (m, 1H), 1.43 (s, 9H), 1.37 (s, 6H), 0.97 (d, J = 6.6 Hz, 4H). Step 2: Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01651] A mixture of tert-butyl 4-(6-cyclopropyl-1-((6-methoxy-2- methylpyrazolo[1,5-a]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)- 2,2-dimethylpiperazine-1-carboxylate (30 mg, 0.052 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep-HPLC (0.1% FA in H2O / ACN) to give title product (10.4 mg, 38.2 %) as a white solid. ESI-MS (M+H) +: 476.3.1H NMR (400 MHz, DMSO-d6) δ 11.37 (s, 1H), 8.32 – 8.23 (m, 3H), 6.39 (s, 1H), 6.16 (s, 1H), 4.00 – 3.94 (m, 5H), 3.23 – 3.18 (m, 2H), 3.06 – 3.00 (m, 4H), 2.98 – 2.91 (m, 2H), 2.31 (s, 3H), 2.10 – 2.02 (m, 1H), 1.17 (s, 6H), 1.01 – 0.93 (m, 4H). Example 563 – Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(6- methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3- b]pyridine-1-carboxamide formate
Figure imgf000815_0001
Step 1: Preparation of tert-butyl 4-(6-cyclopropyl-1-((6-methoxy-2-methyl-2H-pyrazolo[3,4- b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [01652] A mixture of 6-methoxy-2-methyl-2H-pyrazolo[3,4-b]pyridin-5-amine (29 mg, 0.161 mmol), triphosgene (48 mg, 0.161 mmol) and TEA (163 mg, 1.613 mmol) in THF (5 mL) was stirred at 0 oC for 5 min. Then tert-butyl 4-(6-cyclopropyl-2,3-dihydro-1H- pyrrolo[2,3-b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (50 mg, 0.134 mmol) was added to the mixture and stirred at RT for 16 h. The mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL×3).The organic layer was concentrated in vacuo. The residue was triturated with MeOH (3 mL) to afford title product (33 mg, 42.6 %) as a white solid. ESI-MS (M+H) +: 577.1. Step 2: Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(6-methoxy-2-methyl- 2H-pyrazolo[3,4-b]pyridin-5-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide formate. [01653] A mixture of tert-butyl 4-(6-cyclopropyl-1-((6-methoxy-2-methyl-2H- pyrazolo[3,4-b]pyridin-5-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (30 mg, 0.052 mmol) in 4M HCl /EA (3 mL) was stirred at RT for 3 h. The reaction mixture was concentrated and the residue was purified by prep- HPLC (0.1% FA in H2O / ACN) to give title product (10 mg, 36.8 %) as a white solid. ESI- MS (M+H) +: 477.3.1 H NMR (400 MHz, DMSO-d6) δ 11.22 (s, 1H), 8.68 (s, 1H), 8.29 (s, 1H), 8.16 (s, 1H), 6.43 (s, 1H), 4.06 (d, J = 6.4 Hz, 6H), 4.00 – 3.95 (m, 2H), 3.28 – 3.22 (m, 2H), 3.08 – 2.98 (m, 6H), 2.12 – 2.03 (m, 1H), 1.21 (s, 6H), 1.03 – 0.97 (m, 4H). Example 564 – Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro- 2-methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1- carboxamide hydrochloride.
Figure imgf000816_0001
Compound 564 Step 1: Preparation of tert-butyl 4-(6-cyclopropyl-1-((7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate. [01654] To a solution of 7-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (37 mg, 0.23 mmol) in THF (10 mL) were added TEA (228 mg, 2.25 mmol) and triphosgene (68 mg, 0.23 mmol) at 0oC. After 10 min, tert-butyl 4-(6-cyclopropyl-2,3-dihydro-1H-pyrrolo[2,3- b]pyridin-4-yl)-2,2-dimethylpiperazine-1-carboxylate (70 mg, 0.19 mmol) was added to the mixture and stirred at r.t for 16 h. The mixture was concentrated in vacuo. The residue was purified by prep-TLC (DCM: MeOH= 10: 1) to give the compound (30 mg, 30%) as a white solid. ESI-MS (M+H) +:564.4. Step 2: Preparation of 6-cyclopropyl-4-(3,3-dimethylpiperazin-1-yl)-N-(7-fluoro-2- methylimidazo[1,2-a]pyridin-6-yl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridine-1-carboxamide hydrochloride. [01655] To a mixture of tert-butyl 4-(6-cyclopropyl-1-((7-fluoro-2-methylimidazo[1,2- a]pyridin-6-yl)carbamoyl)-2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-4-yl)-2,2- dimethylpiperazine-1-carboxylate (30 mg, 0.05 mmol) in EA (1 mL) was added 4M HCl/EA (3 mL). The precipitate was filtered and washed with EA (3 mL) and lyophilized to give title product (14.5 mg, 58 %) as a white solid. ESI-MS (M+H) +:464.3.1H NMR (400 MHz, DMSO-d6) δ 11.85 (s, 1H), 9.72 (s, 1H), 9.63 (s, 2H), 8.17 (s, 1H), 8.11 (d, J = 8.5 Hz, 1H), 6.60 (s, 1H), 4.08 – 3.98 (m, 3H), 3.58 – 3.44 (m, 2H), 3.32 (s, 2H), 3.25 – 3.08 (m, 4H), 2.45 (s, 3H), 2.13 – 2.01 (m, 1H), 1.40 (s, 6H), 1.03 – 0.93 (m, 4H). Example 565 – Preparation of (2S)-2-methyl-4-1H,2H,3H-pyrrolo[2,3-b]pyridin-4- ylpiperazine-1-carboxylate derivatives.
Figure imgf000817_0001
Step 1: Preparation of 4-chloro-1H,2H,3H-pyrrolo[2,3-b]pyridine [01656] To a solution of 4-chloro-1H-pyrrolo[2,3-b]pyridine (80.0 g, 526.27 mmol) in tetrahydrofuran (1.3 L), (methylsulfanyl)methane borane (80.05 g, 1.05 mol, 100.06 mL, 2.0 eq.) was added carefully at room temperature. The resulting mixture was stirred at 65 °C for 16 hours. After completion of the reaction, the solvent was evaporated under reduced pressure. The crude residue was carefully quenched with methanol (800 mL) and the solvent was again evaporated under reduced pressure. The resulting solid was triturated in a mixture of EtOAc and MeOH (8:2, 1 L), filtered, and the filtrate was concentrated in vacuo. The crude product was then purified by flash column chromatography using a gradient of methyl tert-butyl ether (MTBE/MeOH, 0-100%) to give the title 4-chloro-1H,2H,3H-pyrrolo[2,3- b]pyridine (13.0 g, 92.0% purity, 77.36 mmol, 14.7% yield) as a yellow solid. MS (ES+, m/z): 155.0 [M+H]+.1H NMR (500 MHz, CDCl3) δ 7.67 (d, J = 5.8 Hz, 1H), 6.48 (d, J = 5.8 Hz, 1H), 4.9 - 4.67 (s, 1H), 3.66 (t, J = 8.5 Hz, 2H), 3.11 (t, J = 8.5 Hz, 2H). Step 2: Preparation of (3S)-3-methyl-1-1H,2H,3H-pyrrolo[2,3-b]pyridin-4-ylpiperazine [01657] 4-Chloro-1H,2H,3H-pyrrolo[2,3-b]pyridine (7.33 g, 47.61 mmol), tert-butyl (2S)-2-methylpiperazine-1-carboxylate (9.53 g, 47.61 mmol, 1 eq.), and ethylbis(propan-2- yl)amine (18.45 g, 142.84 mmol, 3 eq.) were dissolved in n-butanol (250 mL). The reaction mixture was transferred to an autoclave and stirred overnight at 140 °C. After the reaction was complete (as confirmed by LCMS), the solvent was evaporated under reduced pressure, yielding crude (3S)-3-methyl-1-1H,2H,3H-pyrrolo[2,3-b]pyridin-4-ylpiperazine (18.0 g, 40.0% purity, 32.98 mmol, 69.3% yield) which was used in the next step without purification. [01658] MS (ES+, m/z): 219.2 [M+H]+ Step 3: Preparation of (2S)-2-methyl-4-1H,2H,3H-pyrrolo[2,3-b]pyridin-4-ylpiperazine-1- carboxylate [01659] Di-tert-butyl dicarbonate (7.91 g, 36.27 mmol, 0.9 eq.) was added dropwise to a stirred solution of (3S)-3-methyl-1-1H,2H,3H-pyrrolo[2,3-b]pyridin-4-ylpiperazine (8.8 g, 40.3 mmol) and ethylbis(propan-2-yl)amine (10.41 g, 80.6 mmol, 2 eq.) in dichloromethane (200 mL) at 0 °C. The reaction mixture was stirred overnight at room temperature. After the reaction was complete, the mixture was washed with water, dried over anhydrous sodium sulfate (Na₂SO₄), filtered, and concentrated in vacuo to give a crude residue. This residue was purified by flash column chromatography using a hexane/MTBE gradient (0-100%) to afford tert-butyl (2S)-2-methyl-4-1H,2H,3H-pyrrolo[2,3-b]pyridin-4-ylpiperazine-1- carboxylate (5.0 g, 95.0% purity, 14.92 mmol, 37% yield). MS (ES+, m/z): 319.2 [M+H]+. 1H NMR (600 MHz,CDCl3) δ 7.68 (d, J = 5.6 Hz, 1H), 6.07 (d, J = 6.2 Hz, 1H), 4.3 (s, 1H), 3.91 (d, J = 13 Hz, 1H), 3.61 - 3.51 (m, 2H), 3.45 (d, J = 11.8 Hz, 1H), 3.35 (d, J = 12.4 Hz, 1H), 3.18 (t, J=12.6 Hz, 1H), 3.04 (t, J = 8.1 Hz, 2H), 2.97 (dd, J = 12.1, 3.4 Hz, 1H), 2.89 - 2.79 (m, 1H), 1.47 (s, 9H), 1.28 (d, J = 6.8 Hz, 3H). Parallel synthesis:
Figure imgf000818_0001
A B C D E [01660] To a solution of 1.1 eq. of Amine (A) and 1.5 eq. DIPEA in 1 mL of dry DMA was added 1.3 eq. Phenyl chloroformate (B) in one portion. The reaction mixture was stirred at rt for 3 hours. To the resulting mixture 1 eq. of mono-Boc diamine (D) and 2.5 eq. of DMAP were added. The reaction mixture was sealed and stirred at 90 °C for 16 hours. After cooling to room temperature, the solvent was evaporated and 1 mL TFA was added and stirred at room temperature for 4 hours. The mixture was evaporated. The residue was dissolved in DMSO (appr.1 mL). The solution was filtered, analyzed by LCMS, and transferred for HPLC purification. [01661] The purification was performed using Agilent 1260 Infinity systems equipped with DAD and mass-detector. Waters Sunfire C18 OBD Prep Column, 100 A, 5 µm, 19 mm × 100 mm with SunFire C18 Prep Guard Cartridge, 100 A, 10 µm, 19 mm × 10 mm was used. Deionized Water (phase A) and HPLC-grade Methanol or Acetonitrile (phase B) were used as an eluent. In most cases TFA was used as an additive to improve the separation of the products. In these cases, TFA salts of the products were formed respectively. Table 2. LCMS data:
Figure imgf000819_0001
Figure imgf000820_0001
Figure imgf000821_0001
Figure imgf000822_0001
Figure imgf000823_0001
Figure imgf000824_0001
Figure imgf000825_0001
Figure imgf000826_0001
Figure imgf000827_0001
Figure imgf000828_0001
Figure imgf000829_0001
Figure imgf000830_0001
Figure imgf000831_0001
Figure imgf000832_0001
Figure imgf000833_0001
Attorney Docket No.: RGT-020WO
Figure imgf000834_0001
Example 566 – Preparation of 4-bromo-N-8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl- 1H,2H,3H-pyrrolo[2,3-b]pyridine-1-carboxamide derivatives.
Figure imgf000834_0002
Step 1: Preparation of N-8-fluoro-2-methylimidazo[1,2-a]pyridin-6-ylcarbamate [01661] A solution of 8-fluoro-2-methylimidazo[1,2-a]pyridin-6-amine (4.1 g, 24.84 mmol) and pyridine (3.93 g, 49.68 mmol, 2 eq.) in dry tetrahydrofuran (40 mL) was cooled to 0 °C using an ice-water bath. Phenyl carbonochloridate (3.87 g, 24.84 mmol, 1 eq.) solution in THF was added dropwise to the reaction mixture at 0 °C. The resulting mixture was stirred for 1 hour at 0 °C, and then the solvent was removed under reduced pressure. The crude product was crystallized from MTBE to give phenyl N-8-fluoro-2-methylimidazo[1,2- a]pyridin-6-ylcarbamate (4.3 g, 98.0% purity, 14.77 mmol, 59.5% yield). MS (ES+, m/z): 286.0 [M+H]+.1H NMR (400 MHz, DMSO): 10.33 (s, 1H), 8.64 (s, 1H), 7.87 (s, 1H), 7.44 (t, J = 7.5 Hz, 2H), 7.3 - 7.2 (m, 3H), 7.12 (d, J = 12.3 Hz, 1H), 2.32 (s, 3H). Step 2: Preparation of 4-bromo-N-8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl-1H,2H,3H- pyrrolo[2,3-b]pyridine-1-carboxamide [01662] Phenyl N-8-fluoro-2-methylimidazo[1,2-a]pyridin-6-ylcarbamate (4.3 g, 15.07 mmol), 4-bromo-1H,2H,3H-pyrrolo[2,3-b]pyridine (2.98 g, 15.07 mmol, 1 eq.), and triethylamine (2.29 g, 22.61 mmol, 1.5 eq.) were dissolved in dry N,N-dimethylformamide (40 mL). The mixture was stirred at 100 °C for 1 hour. After completion of the reaction, water (40 mL) was added to the mixture, resulting in the formation of precipitate. The precipitate was filtered, washed with water (10 mL), and dried. The filtrate was extracted with ethyl acetate (60 mL), and the organic layer was separated, washed with brine (20 mL), dried over anhydrous sodium sulfate (Na SO ), and concentrated under reduced pressure. The 833 IPTS/128781189.2
Attorney Docket No.: RGT-020WO crude residue was triturated with a minimal amount of acetonitrile, and the resulting precipitate was filtered. The combined precipitates were dried in vacuo to give pure 4-bromo- N-8-fluoro-2-methylimidazo[1,2-a]pyridin-6-yl-1H,2H,3H-pyrrolo[2,3-b]pyridine-1- carboxamide (1.67 g, 4.28 mmol, 28.4% yield). MS (ES+, m/z): 390.0 [M+H]+.1H NMR (400 MHz, CDCl3) 11.23 (s, 1H), 8.78 (s, 1H), 7.91 (d, J = 5.9 Hz, 1H), 7.39 (s, 1H), 7.06 (d, J = 5.4 Hz, 1H), 6.88 - 6.77 (m, 1H), 4.23 (t, J = 8.5 Hz, 2H), 3.15 (t, J = 8.5 Hz, 2H), 2.47 (s, 3H). Parallel synthesis:
Figure imgf000835_0001
[01663] To a mixture of 1 eq. of mono-Boc diamine (A) and 1.5 eq. ArBr (B) in 1 mL of dry Dioxane under an inert atmosphere were added 0.05 eq. RuPhosPdG4, 0.05 eq. RuPhos and 2.5 eq. Cs2CO3. The reaction mixture was stirred at 100 °C for 16 hours. After cooling to room temperature, the solvent was evaporated and 1 mL TFA was added and stirred at room temperature for 4 hours. The mixture was evaporated. The residue was dissolved in DMSO (appr.1 mL), treated with scavenger SiliaMetS DMT and filtered. The solution was analyzed by LCMS and transferred for HPLC purification. [01664] The purification was performed using Agilent 1260 Infinity systems equipped with DAD and mass-detector. Waters Sunfire C18 OBD Prep Column, 100 A, 5 μm, 19 mm × 100 mm with SunFire C18 Prep Guard Cartridge, 100 A, 10 μm, 19 mm × 10 mm was used. Deionized Water (phase A) and HPLC-grade Methanol or Acetonitrile (phase B) were used as an eluent. In most cases TFA was used as an additive to improve the separation of the products. In these cases, TFA salts of the products were formed respectively. Table 3. LCMS data:
Figure imgf000835_0002
834 IPTS/128781189.2
Figure imgf000836_0001
Figure imgf000837_0001
Figure imgf000838_0001
Figure imgf000839_0001
Figure imgf000840_0001
Figure imgf000841_0001
Figure imgf000842_0001
Figure imgf000843_0001
Figure imgf000844_0001
Figure imgf000845_0001
Biological Activity of the Compounds of the Present Disclosure [01666] The biological activity of the compounds of the present disclosure was determined utilizing the assay described herein. Example 567 – Measurement of compound effect on pre-mRNA splicing using a PMS1 HiBit assay [01667] CRISPR-Cas9 gene editing allows for cell line generation where an endogenous protein can be tagged with a small 11-amino acid HiBiT tag. When exposed to its larger LgBiT subunit, the HiBiT tag binds with high affinity to produce a complex with luciferase activity that will release luminescent signal when treated with furimazine substrate. This system allows for quantitative measurement of a desired protein upon treatment with compound. Materials • DMEM medium: Gibco #12100-046 • FBS Fetal Bovine Serum: Gibco #10091-148 • Nano-Glo HiBiT Lytic Detection System: Promega #N3050 • White, 384-well assay plate: Greiner #781080 • Plate reader: PerkinElmer Envision [01668] For compound preparation, test compounds were diluted from 10 mM stocks in 1:3.162 serial dilutions in DMSO. Then 100 nL test compounds at the serial dilutions were dispensed into 384-well assay plate using Echo dispenser. Positive control (HPE; Compound A, final concentration 2 μM) and negative control (ZPE; final 0.5% DMSO) were dispensed to respective columns. [01669] To prepare cell lines, HEK 293/PMS1-HiBiT cells were transferred to a 15 mL tube and centrifuged at 1000 rpm for 5 min to pellet the cells. The cells were resuspended to 100,000 cells/mL in the DMEM medium. Then 20 μL of cell suspension were dispensed into the assay plate containing compounds to give seed cell density at 2,000 cells/well. Assay plates were then centrifuged briefly and then incubated at 37 °C, 5% CO2 for 48 hours. After incubation, the assay plate and its contents were equilibrated at room temperature for approximately 20 minutes. 20 μL of Nano-Glo HiBiT lytic reagent was added to the assay plate and the plates were centrifuged at 500 rpm for 1 minute and equilibrated for 15 min. The luminescence (RLU) signals in each well were recorded using Envision plate reader, then converted to percentage inhibition values using the signals in HPE and ZPE treated wells as the references. IC50 values were determined by curve fitting in Levenberg–Marquardt algorithm. [01670] The percent activity was calculated as: % Inhibition = (Value – ZPE)/(HPE – ZPE) x 100% [01671] In Table 4 below, A indicates an IC50 < 0.1 µM, B indicates an IC500.1 µM to < 1.0 µM, and C indicates an IC50 > 1.0 µM.
Figure imgf000846_0001
Figure imgf000847_0001
Figure imgf000847_0002
Figure imgf000848_0001
Figure imgf000848_0002
Figure imgf000849_0001
Figure imgf000849_0002
Figure imgf000850_0001
Figure imgf000850_0002
Figure imgf000851_0001
Figure imgf000851_0002
Figure imgf000852_0001
Figure imgf000852_0002
Figure imgf000853_0001
Figure imgf000853_0002
EQUIVALENTS [01672] The details of one or more embodiments of the disclosure are set forth in the accompanying description above. Although any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present disclosure, the preferred methods and materials are now described. Other features, objects, and advantages of the disclosure will be apparent from the description and from the claims. In the specification and the appended claims, the singular forms include plural referents unless the context clearly dictates otherwise. Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure belongs. All patents and publications cited in this specification are incorporated by reference. [01673] The foregoing description has been presented only for the purposes of illustration and is not intended to limit the disclosure to the precise form disclosed, but by the claims appended hereto.

Claims

CLAIMS WHAT IS CLAIMED: 1. A compound of formula (I),
Figure imgf000854_0001
or a pharmaceutically acceptable salt thereof, wherein Ring A is an optionally substituted 3-12 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; Ring B is an optionally substituted 8-12 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur; each R1 is independently selected from halogen, -CN, C1-6alkyl, C1-6haloalkyl, C1-6alkoxy, C3- 6cycloalkyl, and 5-8 memebered heteroaryl; each R2 is independently selected from halogen and C1-6alkyl; R3 is selected from H and C1-6alkyl; each Ra is independently selected from the group consisting of halogen, -OH, C1-6alkyl, C1- 6haloalkyl, oxo, C3-6cycloalkyl, -C(O)O-C1-6alkyl, -C(O)C1-6haloalkyl, -C(O)O-C1- 6alkylene-OC(O)-C1-6alkyl, and -N(RcRd), wherein the C1-6alkyl is optionally substituted with -OH, C1-6alkoxy, C3-6cycloalkyl, -N(RcRd), or -S(O)2C1-6alkyl, or two Ra attached to the same carbon atom, together with carbon atom to which they are attached, combine to form a C3-6cycloalkyl; each Rb is independently selected from the group consisting of halogen, -OH, -CN, C1-6alkyl, C1-6haloalkyl, C1-6 alkoxy, C1-6haloalkoxy, and C3-6cycloalkyl, wherein the C1-6 alkoxy is optionally substituted with C3-6cycloalkyl; each Rc is independently selected from H, C1-6alkyl, and C3-6cycloalkyl, wherein the C1-6alkyl is optionally substituted with -OH; each Rd is independently selected from H and C1-6alkyl; m is 0, 1, or 2; n is 0, 1, or 2; p is 0, 1, 2, 3, or 4; and q is 0, 1, 2, 3, or 4. 2. The compound of claim 1, wherein m and n are each 0. 3. The compound of claim 1 or 2, wherein Ring A is an optionally substituted 5-6 membered heterocyclyl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. 4. The compound of any one of claims 1-3, wherein Ring A is selected from optionally substituted piperidinyl and optionally substituted pyrrolidinyl. 5. The compound of any one of claims 1-4, wherein each Ra is independently selected from C1-6alkyl and -N(RcRd). 6. The compound of any one of claims 1-5, wherein each Rc is methyl and each Rd is H. 7. The compound of any one of claims 1-6, wherein each Ra is independently selected from methyl and -N(H)CH3. 8. The compound of any one of claims 1-7, wherein p is 1 or 2. 9. The compound of any one of claims 1-8, wherein the portion of the compound
Figure imgf000855_0001
10. The compound of claim 9, wherein the portion of the compound represented by
Figure imgf000856_0001
. 11. The compound of any of claims 1-8, wherein the portion of the compound represented
Figure imgf000856_0002
Figure imgf000857_0001
12. The compound of any one of claims 1-8, wherein the portion of the compound
Figure imgf000857_0002
13. The compound of claim 1, wherein the compound is a compound of formula (Ia),
Figure imgf000857_0003
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, 2, or 3; and the rest of the variables are as defined in claim 1. 14. The compound of claim 13, wherein p is 0.
15. The compound of claim 13, wherein p is 1 or 2. 16. The compound of claim 13 or 15, wherein each Ra is methyl. 17. The compound of claim 1, wherein the compound is a compound of formula (Ib),
Figure imgf000858_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined in claim 1. 18. The compound of claim 17, wherein each Ra is -N(H)CH3. 19. The compound of claim 17 or 18, wherein p is 1. 20. The compound of claim 1, wherein the compound is a compound of formula (Ic),
Figure imgf000858_0002
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined in claim 1. 21. The compound of claim 20, wherein p is 0. 22. The compound of claim 1, wherein the compound is a compound formula (Id),
Figure imgf000859_0001
or a pharmaceutically acceptable salt thereof, wherein p is 0, 1, or 2; and the rest of the variables are as defined as in claim 1. 23. The compound of any one of claims 1-22, wherein Ring B is an optionally substituted 9 membered bicyclic heteroaryl comprising 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur. 24. The compound of any one of claims 1-23, wherein Ring B is selected from the group consisting of optionally substituted indazolyl, optionally substituted imidazo[1,2-a]pyridyl, and optionally substituted 2,7a-dihyrdobenzo[d]oxazolyl. 25. The compound of any one of claims 1-20, wherein each Rb is independently selected from the group consisting of halogen, C1-6alkyl, C1-6haloalkyl, and C1-6alkoxy. 26. The compound of any one of claims 1-21, wherein each Rb is independently selected from the group consisting of fluoro, methyl, methoxy, ethoxy, -CHF2, and -CF3. 27. The compound of any one of claims 1-22, wherein q is 2 or 3. 28. The compound of any of claims 1-22, wherein the portion of the compound represented
Figure imgf000859_0002
Figure imgf000860_0001
Rb Rb q q Rb b q R N q N N N N NH N N N N N N N b N N b , b Rb N R , , R R , q , Rb Rb q q Rb Rb q q Rb Rb q N NH N N , , Rb , H , NH , Rb b N q R N q Rb N q NH NH N Rb N b Rb , q , Rb , NH R , q ,
Figure imgf000861_0001
29. The compound of any one of claims 1-23, wherein the portion of the compound
Figure imgf000861_0002
30. The compound of claim 23, wherein the portion of the compound represented by
Figure imgf000861_0003
F N F
Figure imgf000862_0001
F O O O N N N N N N N N N N , N , N , N , O , F F O F N N N N N O , O , O , S , S , F O O N N N N N N N N N N , , , , ,
Figure imgf000863_0001
31. The compound of any one of claims 1-24, wherein the portion of the compound
Figure imgf000863_0002
32. A compound of selected from those described in Table 1 or a pharmaceutically acceptable salt thereof. 33. A pharmaceutical composition comprising a compound of any one of claims 1-32, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients. 34. A compound of any one of claims 1-32, or a pharmaceutically acceptable salt thereof, for use as a small molecule splicing modulator.
36. A pharmaceutical composition comprising a compound of any one of claims 1-32 and 34, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients. 37. A method of treating a disorder related to a nucleotide repeat expansion n a subject in need thereof, comprising administering to the subject a therapeutically effective amount of a compound of any one of claims 1-32 or a pharmaceutical composition of claim 33. 38. The method of claim 37, wherein the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CNN, ANN, TNN, and GNN, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C). 39. The method of claim 37, wherein the nucleotide repeat expansion comprises a nucleotide sequence repeated two or more times, wherein the nucleotide sequence is selected from the group consisting of CAG, CAG/CTG, GCG, GCN, CGG, CCG, CCCCGCCCCGCG, GCA, GGGGCC, CTG, GAA, ATTCT, TGGAA, GGCCTG, AAGGG, CCCTCT, ATTTT/ATTTC, and CCCTCT, wherein N is a nucleotide selected from the group consisting of adenine (A), thymine (T), guanine (G), and cytosine (C). 40. The method of claim 38 or 39, wherein the nucleotide repeat expansion comprises a trinucleotide sequence repeated two or more times, wherein the trinucleotide sequence is selected from the group consisting of CAG, CTG, CGG, and GCN. 41. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of claims 1-32 or a pharmaceutical composition of claim 33, wherein the disease is selected from the group consisting of Dentatorubropallidoluysian atrophy, Huntington's disease, spinal and bulbar muscular atrophy, SCA1 (Spinocerebellar ataxia Type 1), SCA2 (Spinocerebellar ataxia Type 2), SCA3 (Spinocerebellar ataxia Type 3 or Machado-Joseph disease), SCA6 (Spinocerebellar ataxia Type 6), SCA7 (Spinocerebellar ataxia Type 7), SCA12 (Spinocerebellar ataxia Type 12), SCA17 (Spinocerebellar ataxia Type 17), FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), FRAXE (Fragile XE mental retardation), Baratela-Scott syndrome, FRDA (Friedreich's ataxia), DM1 (Myotonic dystrophy Type 1), DM2 (Myotonic dystrophy Type 2), SCA8 (Spinocerebellar ataxia Type 8), Fuchs endothelial corneal dystrophy, Desbuquois dysplasia, amyotrophic lateral sclerosis, frontotemporal dementia, GLS (glutaminase) disease, and SBMA/Kennedy disease. 42. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of claims 1-32 or a pharmaceutical composition of claim 33, wherein the disease is Huntington’s disease. 43. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of claims 1-32 or a pharmaceutical composition of claim 33, wherein the disease is Myotonic dystrophy 1. 44. A method of treating a disease in a subject in need thereof, the method comprising administering to the subject a therapeutically effective amount of a compound of any one of claims 1-32 or a pharmaceutical composition of claim 33, wherein the disease is selected from the group consisting of FRAXA (Fragile X syndrome), FXTAS (Fragile X-associated tremor/ataxia syndrome), and FRAXE (Fragile XE mental retardation).
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