WO2025146081A1 - B7-h3 binding protein - Google Patents
B7-h3 binding protein Download PDFInfo
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- WO2025146081A1 WO2025146081A1 PCT/CN2025/070139 CN2025070139W WO2025146081A1 WO 2025146081 A1 WO2025146081 A1 WO 2025146081A1 CN 2025070139 W CN2025070139 W CN 2025070139W WO 2025146081 A1 WO2025146081 A1 WO 2025146081A1
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K39/395—Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
- C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
Definitions
- the present invention belongs to the field of biotechnology, and in particular relates to antigen binding proteins, heavy chain antibodies and nano antibodies, and uses thereof.
- B7-H3 There is a huge difference in the protein expression level of B7-H3 in normal tissues and tumor tissues. It is expressed in large quantities in a variety of tumor tissues, such as prostate cancer, pancreatic cancer, hepatocellular carcinoma, etc., but rarely expressed in normal tissues (Zhou WT, Jin WL. B7-H3/CD276: An Emerging Cancer Immunother-apy. Front Immunol. 2021; 12: 701006.). Taking advantage of this feature, targeting B7-H3 with drugs can specifically kill cancer tissues while minimizing damage to healthy cells. These characteristics make B7-H3 a promising target for cancer treatment.
- Nanobody is a new type of antibody, also known as single-domain antibody, which is obtained by cloning the variable domain of the heavy chain of heavy-chain antibody (VHH) naturally lacking light chains in animals such as camelids.
- VHH heavy chain of heavy-chain antibody
- Nanobodies Compared with conventional monoclonal antibodies, nanobodies have the advantages of small molecular weight, good solubility, strong stability, weak immunogenicity, strong penetration, high specificity, simple humanization, high expression, and easy production. Nanobodies have good application prospects in the fields of biotechnology and medicine, and nanobody drugs have been approved for marketing. The application of nanobody technology to develop therapeutic antibodies against B7-H3 has good prospects.
- B7-H3 binding proteins that specifically recognize and bind to B7-H3, in particular, nanobodies (also called B7-H3 single domain antibodies, or B7-H3 VHH antibodies) and heavy chain antibodies that specifically recognize and bind to B7-H3.
- nanobodies also called B7-H3 single domain antibodies, or B7-H3 VHH antibodies
- heavy chain antibodies that specifically recognize and bind to B7-H3.
- a B7-H3 binding protein is provided.
- the B7-H3 binding protein according to an embodiment of the present invention can specifically target and bind to B7-H3.
- the binding protein comprises an immunoglobulin single variable domain, wherein the immunoglobulin single variable domain comprises CDR1, CDR2 and CDR3 contained in the VHH shown in any one of SEQ ID NO: 1-13.
- the CDR1, CDR2 and CDR3 are encoded according to Kabat, AbM, Chothia or IMGT.
- the immunoglobulin single variable domain comprises CDR1, CDR2 and CDR3, and the CDR1, CDR2 and CDR3 are encoded according to AbM, wherein:
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:29
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:30
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:31;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:23
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:24
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:25;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:26
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:27
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:28;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:32
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:33
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:34;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:35
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:36
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:37;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:38
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:39
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:40;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:41
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:42
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:43;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:44
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:45
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:46;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:47
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:48
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:49;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:50
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:51
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:52;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:53
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:54
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:55;
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:56
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:57
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:58; or
- the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in SEQ ID NO:59
- the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in SEQ ID NO:60
- the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in SEQ ID NO:61.
- the immunoglobulin single variable domain comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in any one of SEQ ID NO: 1-13, or consists of an amino acid sequence that is at least 80%, at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in any one of SEQ ID NO: 1-13.
- the B7-H3 binding protein is monovalent, bivalent, or multivalent.
- the B7-H3 binding protein is monospecific, bispecific, or multispecific.
- the immunoglobulin single variable domain contained in the B7-H3 binding protein comprises a heavy chain framework region, and at least a portion of the heavy chain framework region is from at least one of a mouse antibody, a human antibody, a primate antibody, and a mutant thereof.
- the immunoglobulin single variable domain comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 14-20, more preferably, the immunoglobulin single variable domain comprises or consists of an amino acid sequence shown in any one of SEQ ID NO: 14-20.
- the heavy chain antibody comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 70-82 and SEQ ID NO: 62-68. In some embodiments of the present disclosure, the heavy chain antibody comprises or consists of the amino acid sequence shown in any one of SEQ ID NO:70-82 and SEQ ID NO:62-68.
- the B7-H3 binding protein is a nanobody.
- the nanobody comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 1-13.
- the nanobody comprises an amino acid sequence shown in any one of SEQ ID NO: 1-13 or consists of an amino acid sequence shown in any one of SEQ ID NO: 1-13.
- the nanobody comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 14-20.
- the nanobody comprises an amino acid sequence shown in any one of SEQ ID NO: 14-20 or consists of an amino acid sequence shown in any one of SEQ ID NO: 14-20.
- the Nanobody with the amino acid sequence shown in SEQ ID NO:1 corresponds to clone C23 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:2 corresponds to clone A13 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:3 corresponds to clone A2 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:4 corresponds to clone A3 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:5 corresponds to clone A77 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:6 corresponds to clone A83 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:7 corresponds to clone B102 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:8 corresponds to clone B91 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:16 corresponds to the clone VHH23 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:17 corresponds to the clone VHH24 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:18 corresponds to the clone VHH25 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:19 corresponds to the clone VHH26 of the present disclosure
- the Nanobody with the amino acid sequence shown in SEQ ID NO:20 corresponds to the clone VHH27 of the present disclosure.
- a fusion protein which comprises the B7-H3 binding protein described in the first aspect of the present disclosure.
- a nucleic acid molecule which encodes the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure.
- the nucleic acid molecule is DNA.
- an expression vector comprising the nucleic acid molecule described in the third aspect of the present disclosure.
- the nucleic acid molecule encodes the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure. Therefore, the expression vector introduced into the host cell according to the embodiment of the present invention can express the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure under conditions suitable for protein expression.
- the expression vector is a prokaryotic expression vector or a eukaryotic expression vector.
- a cell comprising the nucleic acid molecule described in the third aspect of the present disclosure or the expression vector described in the fourth aspect of the present disclosure is provided.
- the cell is obtained by introducing the expression vector described in the fourth aspect of the present disclosure into a host cell.
- the cell is a prokaryotic cell or a eukaryotic cell.
- the cell is a mammalian cell, such as a CHO cell.
- a conjugate in the sixth aspect of the present disclosure, comprises the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure, and further comprises a therapeutic agent, a diagnostic agent, or an imaging agent conjugated to the B7-H3 binding protein or the fusion protein.
- the conjugate comprises the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure, and further comprises a therapeutic agent, a diagnostic agent, or an imaging agent conjugated to the B7-H3 binding protein or the fusion protein.
- the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure is conjugated to the therapeutic agent, the diagnostic agent, or the imaging agent through a joint.
- the joint comprises a cleavable joint or a non-cleavable joint.
- the linker is selected from MC (6-maleimidocaproyl), Val-Cit (valine-citrulline), PABC (p-amino-benzyloxycarbonyl), DMEA (dimethylethylamine), Val-Cit-PABC, MC-Val-Cit-PABC, MC-Val-Cit-PABC-DMEA, GGFG (glycine-glycine-phenylalanine-glycine), MC-GGFG, AcBut (4-(4-acetylphenoxy)-butyric acid) and AcBut-dimethylhydrazide, preferably MC-GGFG.
- the therapeutic agent is a small molecule cytotoxic drug.
- the therapeutic agent is selected from topoisomerase inhibitors, microtubule inhibitors, antibiotics, DNA synthesis inhibitors, RNA polymerase II inhibitors and RNA spliceosome inhibitors, preferably topoisomerase inhibitors.
- the therapeutic agent is selected from Exitecan (DX8951), MMAE, MMAF, duocarmycin, DM1, DM4, SN-38, Dxd, calicheamicin, doxorubicin and PBDs (benzodiazepines), preferably Exitecan.
- the part formed by the connection of the linker and the therapeutic agent has the following structure:
- the conjugate according to the sixth aspect of the present disclosure can be targeted and act on target cells containing B7-H3 under the guidance of the B7-H3 binding protein or fusion protein.
- a composition comprising the B7-H3 binding protein described in the first aspect of the present disclosure, the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, and/or the conjugate described in the sixth aspect of the present disclosure.
- the composition is a pharmaceutical composition.
- the pharmaceutical composition further comprises a pharmaceutically acceptable carrier, excipient or diluent.
- the B7-H3 binding protein described in the first aspect of the present disclosure the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, the conjugate described in the sixth aspect of the present disclosure, and/or the composition described in the seventh aspect of the present disclosure in the preparation of a medicament for preventing, treating or alleviating B7-H3-related diseases.
- the other agent is an immunotherapeutic agent or a chemotherapeutic agent.
- the B7-H3 binding protein described in the first aspect of the present disclosure the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, the conjugate described in the sixth aspect of the present disclosure, and/or the composition described in the seventh aspect of the present disclosure, which are used for preventing, treating or alleviating diseases associated with B7-H3.
- a method for preventing, treating or alleviating a B7-H3-related disease in a subject comprises administering to the subject the B7-H3 binding protein described in the first aspect of the present disclosure, the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, the conjugate described in the sixth aspect of the present disclosure, and/or the composition described in the seventh aspect of the present disclosure.
- the B7-H3-related disease or condition is a B7-H3-mediated disease or condition.
- the B7-H3-mediated disease or condition is a tumor.
- the B7-H3-mediated disease or condition is a solid tumor and/or a hematological tumor.
- the B7-H3-mediated disease or condition is one or more tumors selected from the group consisting of lung cancer, breast cancer, prostate cancer, pancreatic cancer, colorectal cancer, melanoma, liver cancer, ovarian cancer, bladder cancer, gastric cancer, esophageal cancer and kidney cancer.
- the B7-H3 mediated disease or condition is one or more tumors selected from the group consisting of: adrenal tumors, AIDS-related cancers, alveolar soft part sarcomas, astrocytic tumors, bone cancer, brain and spinal cord cancer, metastatic brain tumors, B cell cancers, cancer, carotid body tumors, chondrosarcomas, chordomas, benign fibrous histiocytomas of the skin, desmoplastic small round cell tumors, ependymomas, Ewing's tumors, extraosseous myxoid chondrosarcomas, osteogenesis imperfecta, fibrous dysplasia of bone, gallbladder cancer or bile duct cancer, gestational trophoblastic disease, germ cell tumors , head and neck cancer, hepatocellular carcinoma, islet cell tumor, Kaposi's sarcoma, leukemia, liposarcoma/malignant lipoma, lymphoma,
- kits for detecting B7-H3 or cells containing B7-H3 comprises the B7-H3 binding protein of the first aspect of the present disclosure or the conjugate of the sixth aspect of the present disclosure.
- the B7-H3 binding protein of the first aspect of the present disclosure or the conjugate of the sixth aspect of the present disclosure in preparing a kit for detecting B7-H3 or cells containing B7-H3.
- a method for detecting B7-H3 or a cell containing B7-H3 comprises contacting the B7-H3 binding protein described in the first aspect of the present disclosure or the conjugate described in the sixth aspect of the present disclosure with a sample to be tested.
- a method for determining the presence and/or content of B7-H3 is also provided, comprising contacting the B7-H3 binding protein described in the first aspect of the present disclosure and/or the conjugate described in the sixth aspect of the present disclosure with a sample to be tested.
- a chimeric antigen receptor comprises an antigen recognition domain, a hinge region, a transmembrane domain, and an intracellular domain (including a co-stimulatory domain and a signal transduction domain), and the antigen recognition domain comprises the B7-H3 binding protein described in the first aspect of the present disclosure.
- Figure 1 shows the results of ELISA assays of VHH supernatants expressed by 33 clones with unique sequences in the initial screening using the corresponding Human B7-H3 antigen or Mouse B7-H3 antigen.
- Figure 1A shows the results of ELISA assays of VHH supernatants expressed by A2, A3, A9, A13, A14, A35, A75, A77, A80, A83, A84, and A94 clones using the Human B7-H3-Fc antigen.
- Figure 1B shows the results of ELISA assays of VHH supernatants expressed by A2, A3, A9, A13, A14, A35, A75, A77, A80, A83, A84, and A94 clones using the Mouse B7-H3-Fc antigen.
- Figure 1C shows the results of ELISA assays of VHH supernatants expressed by B5, B81, B90, B91, B102, B103, and B137 clones using Human B7-H3-Fc antigen.
- Figure 1D shows the results of ELISA assays of VHH supernatants expressed by B5, B81, B90, B91, B102, B103, and B137 clones using Mouse B7-H3-Fc antigen.
- Figure 1E shows the results of ELISA assays of VHH supernatants expressed by C13, C17, C23, C52, C58, C59, C80, C123, C130, C184, C217, C221, C340, and C357 clones using Human B7-H3-Fc antigen.
- Figure 1F shows the results of ELISA assays of VHH supernatants expressed by C13, C17, C23, C52, C58, C59, C80, C123, C130, C184, C217, C221, C340, and C357 clones using Mouse B7-H3-Fc antigen.
- Figure 1G shows the results of ELISA assays of VHH supernatants expressed by C157 and C190 clones using Human B7-H3-Fc antigen.
- Figure 1H shows the results of ELISA assays of VHH supernatants expressed by C157 and C190 clones using Mouse B7-H3-Fc antigen.
- Figure 1I shows the results of ELISA assays of VHH supernatants expressed by D9, D16, D22, D29, and D37 clones using Human B7-H3-Fc antigen.
- Figure 1J shows the results of ELISA assay of VHH supernatants expressed by D9, D16, D22, D29, and D37 clones using Mouse B7-H3-Fc antigen.
- Figure 2 shows the results of ELISA detection of VHH-Fc antibodies expressed and purified from the construct using Human B7-H3-His.
- Figure 3 shows the results of ELISA detection of VHH-Fc antibodies expressed and purified from the construct using Mouse B7-H3-Fc.
- Figure 4 shows the results of ELISA detection of VHH-Fc antibodies expressed and purified from the construct using Cyno B7-H3-His.
- Figure 5 shows the binding activity of humanized antibodies VHH21-Fc, VHH22-Fc, VHH23-Fc, VHH24-Fc, VHH25-Fc, VHH26-Fc, and VHH27-Fc to antigens.
- Figure 5A shows the binding activity of humanized antibodies to Human B7-H3-His
- Figure 5B shows the binding activity of humanized antibodies to Mouse B7-H3 His
- Figure 5C shows the binding activity of humanized antibodies to Cyno B7-H3 His.
- Figure 6 shows the in vivo antitumor efficacy of the humanized antibody VHH25-0143ADC molecule at different doses in the Calu-6 human lung cancer subcutaneous transplanted tumor mouse model.
- the dosage was 1 mg/kg, 3 mg/kg and 10 mg/kg, and the frequency of administration was once a week (QW), for a total of 3 times.
- immunoglobulin sequence whether it is used herein to refer to a heavy chain antibody or a conventional 4-chain antibody, is used as a general term to include full-length antibodies, single chains thereof, and all parts, domains or fragments thereof (including but not limited to antigen binding domains or fragments, such as VHH domains or VH / VL domains, respectively).
- sequence used herein (e.g., “immunoglobulin sequence”, “antibody sequence”, “variable domain sequence”, “ VHH sequence” or “protein sequence” and other terms) should generally be understood to include the relevant amino acid sequence and the nucleic acid sequence or nucleotide sequence encoding the relevant amino acid sequence, unless the context requires a more limited interpretation.
- the percentage of "sequence identity" between a first sequence and a second sequence can be calculated by dividing [the number of nucleotides in the first sequence that are identical to the nucleotides at corresponding positions in the second sequence] by [the total number of nucleotides in the first sequence] and multiplying by [100%], wherein each deletion, insertion, substitution or addition of a nucleotide in the second nucleotide sequence is considered to be a difference of a single nucleotide (position) compared to the first nucleotide sequence.
- the degree of sequence identity between two or more nucleotide sequences can be calculated using known computer algorithms for sequence alignment such as NCBI Blast v2.0 using standard settings.
- the percentage of "sequence identity" between a first amino acid sequence and a second amino acid sequence can be calculated by dividing [the number of amino acid residues in the first amino acid sequence that are identical to the amino acid residues at corresponding positions in the second amino acid sequence] by [the total number of amino acids in the first amino acid sequence] multiplied by [100%], wherein the deletion, insertion, substitution or addition of each amino acid residue in the second amino acid sequence is considered to be a difference of a single amino acid residue (position) compared to the first amino acid sequence, i.e., an "amino acid difference" as defined herein.
- the degree of sequence identity between two amino acid sequences can be calculated using known computer algorithms such as those described above for determining the degree of sequence identity for nucleotide sequences, again using standard settings.
- amino acid sequence with the most amino acid residues will be used as the "first" amino acid sequence and the other amino acid sequence will be used as the "second" amino acid sequence.
- conservative amino acid substitutions can generally be described as amino acid substitutions in which an amino acid residue is replaced with another amino acid residue of similar chemical structure, which has little or substantially no effect on the function, activity or other biological properties of the polypeptide.
- conservative amino acid substitutions are well known in the art, for example WO 04/037999, GB-A-2 357 768, WO 98/49185, WO 00/46383 and WO 01/09300; and (preferably) the type and/or combination of these substitutions may be selected according to the relevant teachings from WO 04/037999 and WO 98/49185 and the further references cited therein.
- Such conservative substitutions are preferably substitutions in which one amino acid from the following groups (a) to (e) is replaced by another amino acid residue from the same group: (a) small aliphatic, non-polar or weakly polar residues: Ala, Ser, Thr, Pro and Gly; (b) polar, negatively charged residues and their (uncharged) amides: Asp, Asn, Glu and Gln; (c) polar, positively charged residues: His, Arg and Lys; (d) large aliphatic, non-polar residues: Met, Leu, He, Val and Cys; and (e) aromatic residues: Phe, Tyr and Trp.
- Particularly preferred conservative substitutions are as follows: Ala to Gly or to Ser; Arg to Lys; Asn to Gln or to His; Asp to Glu; Cys to Ser; Gln to Asn; Glu to Asp; Gly to Ala or to Pro; His to Asn or to Gln; Ile to Leu or to Val; Leu to Ile or to Val; Lys to Arg, to Gln or to Glu; Met to Leu, to Tyr or to Ile; Phe to Met, to Leu or to Tyr; Ser to Thr; Thr to Ser; Trp to Tyr; Tyr to Trp; and/or Phe to Val, to Ile or to Leu.
- Any amino acid substitutions described herein applied to polypeptides may also be based on an analysis of amino acid variation frequencies between homologous proteins from different species developed by Schulz et al., Principles of Protein Structure, Springer-Verlag, 1978, an analysis of structure-forming potential developed by Chou and Fasman, Biochemistry 13:211, 1974 and Adv. Enzymol., 47:45-149, 1978, and an analysis of protein hydrophobicity patterns developed by Eisenberg et al., Proc. Nat. Acad Sci. USA 81:140-144, 1984; Kyte & Doolittle, J Mol. Biol. 157:105-132, 1981, and Goldman et al., Ann. Rev. Biophys. Chem. 15:321-353, 1986, the disclosures of which are incorporated herein by reference in their entirety.
- Amino acid sequences and nucleic acid sequences are said to be “identical” if they have 100% sequence identity (as defined herein) over their entire length.
- a nucleic acid sequence or an amino acid sequence is considered to be "in substantially isolated form", e.g., when it has been separated from at least one other component with which it is normally associated in said source or medium, such as another nucleic acid, another protein/polypeptide, another biological component or macromolecule or at least one contaminant, impurity or minor component, compared to its natural biological source and/or the reaction medium or culture medium from which it is obtained.
- a nucleic acid sequence or an amino acid sequence is considered to be “substantially isolated” when it has been purified at least 2-fold, particularly at least 10-fold, more particularly at least 100-fold and up to 1000-fold or more.
- a nucleic acid sequence or an amino acid sequence "in substantially isolated form” is preferably substantially homogeneous, as determined using a suitable technique, such as a suitable chromatographic technique, such as polyacrylamide-gel electrophoresis.
- the term "specificity” refers to the number of different types of antigens or antigenic determinants that a particular antigen binding molecule or antigen binding protein (e.g., nanoantibodies or polypeptides of the present invention) molecule can bind to.
- the specificity of an antigen binding protein can be determined based on affinity and/or avidity.
- Avidity is represented by the equilibrium constant (KD) of the dissociation of antigen and antigen binding protein, and is a measure of the binding strength between an antigenic determinant and the antigen binding site of an antigen binding protein: the smaller the KD value, the stronger the binding strength between an antigenic determinant and an antigen binding molecule (or, affinity can also be expressed as an affinity constant (KA), which is 1/KD).
- Avidity is a measure of the binding strength between an antigen binding molecule (e.g., nanoantibodies of the present invention, antibodies, or heavy chain antibodies) and a related antigen. Avidity relates to the affinity between an antigenic determinant and the antigen binding site of an antigen binding molecule and the number of related binding sites present on the antigen binding molecule.
- an antigen binding molecule e.g., nanoantibodies of the present invention, antibodies, or heavy chain antibodies
- antigen binding proteins e.g., Nanobodies and/or heavy chain antibodies of the invention
- KD dissociation constant
- KD dissociation constant
- a dissociation constant of 10-7 to 10-12 mol/liter or less preferably with a dissociation constant (KD) of 10-8 to 10-12 mol/liter
- KD dissociation constant
- a binding affinity of at least 107 M -1 preferably at least 108 M -1 , more preferably at least 109 M- 1 , for example at least 1012 M -1 .
- any KD value greater than 10-4 mol/liter represents non-specific binding.
- the B7-H3 binding proteins of the invention will bind to the desired antigen with an affinity of less than 500 nM, preferably less than 200 nM, more preferably less than 10 nM, for example less than 500 pM.
- Specific binding of an antigen binding protein to an antigen or antigenic determinant can be determined by any suitable means known per se, including, for example, Scatchard analysis and/or competitive binding assays, such as radioimmunoassay (RIA), enzyme immunoassay (EIA) and sandwich competition assays and different variations known per se in the art.
- variable domain of the heavy chain of a “heavy chain antibody” is also called “VHH”, also known as a single domain antibody, a heavy chain single domain antibody, a VHH antibody fragment, and a VHH antibody.
- VHH domain is used to distinguish the variable domain from the heavy chain variable domain present in conventional 4-chain antibodies (which is referred to herein as a “VH domain”) and the light chain variable domain present in conventional 4-chain antibodies (which is referred to herein as a “VL domain”).
- the VHH domain specifically binds to an epitope without the need for other antigen-binding domains (this is in contrast to the VH or VL domains in conventional 4-chain antibodies, in which case the epitope is recognized by the VL domain together with the VH domain).
- the VHH domain is a small, stable, and efficient antigen recognition unit formed by a single immunoglobulin domain.
- the amino acid sequence and structure of Nanobodies can be considered (but not limited to) as comprising four framework regions or "FRs”, referred to in the art and herein as “Framework region 1" or “FR1”; “Framework region 2" or “FR2”; “Framework region 3” or “FR3”; and “Framework region 4" or “FR4", respectively; these framework regions are interrupted by three complementarity determining regions or "CDRs”, referred to in the art as "Complementarity Determining Region 1" or “CDR1”; “Complementarity Determining Region 2" or “CDR2”; and “Complementarity Determining Region 3" or “CDR3", respectively.
- CDRs complementarity determining regions or "CDRs”
- the amino acid residues of Nanobodies are numbered according to the common numbering for VH domains given by Kabat et al. ("Sequence of protein of immunological Interest", US Public Health Services, NIH Bethesda, MD, Publication No. 91), as applied to VHH domains of camelids in Riechmann and Muyldermans, J. Immunol. Methods 231, 25-38 (1999) (see, e.g., Figure 2 of the above reference).
- the total number of amino acid residues in each CDR may vary and may not correspond to the total number of amino acid residues represented by the Kabat numbering.
- VHH domains have many unique structural features and functional properties, which make isolated VHH domains (and Nanobodies based on VHH domains that share these structural features and functional properties with naturally occurring VHH domains) and proteins containing isolated VHH domains very advantageous for use as functional antigen-binding domains or proteins.
- VHH domains which have essentially been "designed" to functionally bind to antigens in the absence of light chain variable domains and without any interaction with light chain variable domains
- Nanobodies can be used as single, relatively small, functional antigen-binding structural units, domains or proteins.
- Another embodiment of the invention is a composition comprising a Nanobody, a B7-H3 binding protein, a heavy chain antibody, an antigen binding fragment, a nucleic acid, a cell and/or an antibody-drug composition as defined above.
- Another embodiment of the invention is a composition as defined above further comprising a pharmaceutically acceptable carrier.
- Another embodiment of the invention is a B7-H3 binding protein, a heavy chain antibody, an antigen-binding fragment or a Nanobody as defined above, or a nucleic acid as defined above, or a cell as defined above, or an antibody-drug conjugate as defined above, or a composition as defined above, for use as a medicament.
- Another embodiment of the present invention is a B7-H3 binding protein, a heavy chain antibody, an antigen binding fragment or a nanobody as defined above, or a nucleic acid as defined above, or a cell as defined above, or an antibody-drug conjugate as defined above, or a composition as defined above for treating, preventing and/or alleviating a B7-H3-related disease.
- the B7-H3-related disease or condition is a B7-H3-mediated disease or condition.
- the B7-H3-mediated disease or condition is a tumor.
- the B7-H3-mediated disease or condition is a solid tumor and/or a hematological tumor.
- Another embodiment of the invention is a method for the prophylactic or therapeutic treatment of a B7-H3-associated disease or disorder, comprising administering to the patient an effective dose of a Nanobody, antibody, heavy chain antibody, fusion protein, nucleic acid, recombinant cell, conjugate, or composition as defined above.
- Another embodiment of the invention is the method as defined above, wherein said host cell is a bacterial, yeast or mammalian cell.
- Another embodiment of the present invention is a method for diagnosing a disease or condition mediated by B7-H3, comprising the steps of:
- the sample is a biopsy sample.
- the disease is a tumor.
- the disease is a solid tumor and/or a blood tumor.
- the disease is one or more tumors selected from the group consisting of lung cancer, breast cancer, prostate cancer, pancreatic cancer, colorectal cancer, melanoma, liver cancer, ovarian cancer, bladder cancer, gastric cancer, esophageal cancer and kidney cancer, adrenal tumors, AIDS-related cancers, alveolar soft part sarcoma, astrocytic tumors, bone cancer, brain and spinal cord cancer, metastatic brain tumors, B cell cancer, cancer, carotid body tumors, chondrosarcoma, chordoma, benign fibrous histiocytoma of the skin, desmoplastic small round cell tumor, ependymoma, Ewing's tumor, extraskeletal myxoid chondrosarcoma, osteogenesis imperfecta, fibrous dysplasia
- Another embodiment of the present invention is a kit for diagnosing a disease or disorder associated with B7-H3.
- the reagent can be used in the method as defined above.
- Another embodiment of the invention is a B7-H3 binding protein, Nanobody, heavy chain antibody, fusion protein as defined above further comprising one or more in vivo imaging agents.
- One embodiment of the present invention relates to a pharmaceutical composition
- a pharmaceutical composition comprising at least one B7-H3 binding protein, Nanobody, heavy chain antibody, fusion protein of the present invention, and at least one pharmaceutically acceptable carrier, diluent or excipient.
- B7-H3 binding proteins of the invention may be desirable to modify the B7-H3 binding proteins of the invention in terms of effector function to enhance their therapeutic efficacy.
- nanobody fusions fused to certain Fc domains, especially to Fc domains of human origin may be advantageous.
- Humanization refers to mutations that result in little or no potential immunogenicity when administered to human patients.
- humanization of a polypeptide may include the following steps: replacing one or more non-human immunoglobulin amino acids with human counterparts present in a human consensus sequence or human germline gene sequence without causing the polypeptide to lose its typical characteristics, i.e., humanization will not significantly affect the antigen binding ability of the resulting polypeptide.
- humanized Nanobodies are defined as Nanobodies that have at least 50% homology (e.g. 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 100%) with human framework regions.
- One embodiment of the invention relates to polypeptides comprising at least one Nanobody, in which one or more amino acid residues have been substituted without substantially altering the antigen binding capacity.
- the B7-H3 binding proteins of the invention may be modified, and such modifications are within the scope of the invention.
- the polypeptide may be used as a drug carrier, in which case it may be fused to a therapeutic activator, or its solubility properties may be altered by fusion to an ionic/bipolar group, or it may be used for imaging by fusion to a suitable imaging marker, or it may contain modified amino acids, etc.
- the polypeptide may also be prepared as a salt. Such modifications that substantially retain binding to B7-H3 are within the scope of the invention.
- analogues in particular analogues of the Nanobodies of SEQ ID NO: 1-20, is also within the scope of the invention.
- analogues in particular analogues of the Nanobodies of SEQ ID NO: 1-20, is also within the scope of the invention.
- the term "Nanobody of the invention” in its broadest sense also covers such analogues.
- one or more amino acid residues may have been replaced, deleted and/or added compared to the Nanobodies of the invention as defined herein.
- Such substitutions, insertions or deletions may be made in one or more framework regions and/or in one or more CDRs.
- substitutions, insertions or deletions are made in one or more framework regions, they may be made at one or more other positions in one or more Hallmark residues and/or framework residues, but substitutions, insertions or deletions of Hallmark residues are generally less preferred (unless these are suitable humanizing substitutions as described herein).
- chelating group which, for example, chelates one of the above metals or metal cations.
- Suitable chelating groups include, for example, but are not limited to, diethylenetriaminepentaacetic acid (DTPA) or ethylenediaminetetraacetic acid (EDTA).
- Yet another modification may include the introduction of a functional group that is part of a specific binding pair, such as a biotin-(streptavidin) avidin binding pair.
- a functional group can be used to connect the nanobodies of the invention to another protein, polypeptide or chemical compound that is bound to the other half of the binding pair (i.e., by forming a binding pair).
- the nanobodies of the invention can be conjugated to biotin and connected to another protein, polypeptide, compound or carrier conjugated to avidin or streptavidin.
- conjugated nanobodies can be used as reporter genes, such as in a diagnostic system in which a detectable signal-generating agent is conjugated to avidin or streptavidin.
- the antigen Human B7-H3-Fc was diluted with PBS to a final concentration of 2 ⁇ g/mL, and 30 ⁇ L of the dilution was added to the first ELISA plate and coated overnight at 4°C.
- the plate was rinsed three times with PBST, then blocked with PBSM containing 5% skim milk at room temperature for two hours, and then rinsed three times with PBST.
- the negative serum without immunization and the serum after the fourth or fifth immunization were diluted with PBS, with a 2000-fold dilution in the first well, and then a 2-fold gradient dilution was used for the subsequent 7 wells.
- the diluted serum was added to the first ELISA plate and incubated at room temperature for 1 hour. After washing the plate three times with PBST, the secondary antibody Goat anti-Llama IgG (H+L) Secondary Antibody [HRP] (purchased from NOVUS Cat. NBP1-75088) was added at 1:5000 and incubated at room temperature for 0.5 hours. After incubation, the plate was washed six times with PBST and TMB (SurModics, TMBS-1000-01) was added for color development. According to the color development results, 2M HCl was added to terminate the reaction and the plate was read at OD450 using a microplate reader (Molecular Devices, SpecterMax 190).
- Goat anti-Llama IgG H+L Secondary Antibody [HRP]
- RNA was extracted from PBMC cells by chloroform method and reverse transcribed into cDNA.
- Degenerate primers were designed based on the situation of VHH antibody germline genes, and the DNA fragment encoding VHH-CH2 was obtained by PCR amplification and recovery of PCR products by agarose gel electrophoresis. Then, by the method of secondary PCR, the DNA fragment encoding the variable domain (VHH) was amplified using the DNA fragment encoding VHH-CH2 as a template. Then, the DNA fragment encoding VHH was digested and purified and constructed into a phage display vector.
- the vector expressing VHH was transformed into competent Escherichia coli by an electrotransformer, and 10 ⁇ l was taken to coat a monoclonal plate for sequencing.
- the storage capacity of the antibody library and the correct insertion rate of the antibody gene were determined by dilution point plate method and monoclonal sequencing analysis, respectively.
- the storage capacity of the single domain antibody library was determined to be 10 8 level, and sequence analysis showed that the correct insertion rate of the antibody gene was greater than 80%.
- the principle of immunotube screening is to coat the antigen protein Human B7-H3-Fc or Human B7-H3-His on the surface of an immunotube with high adsorption capacity, and then enrich the specific monoclonal antibodies against the antigen by adding the phage display antibody library into the immunotube and incubating, washing and eluting the antigen protein adsorbed on the surface of the immunotube.
- the specific method is as follows. Add 1mL 300 ⁇ g/mL Human B7-H3-Fc or Human B7-H3-His to different groups of immunotubes and coat at 4°C. Incubate the phage suspension with the protein-coated immunotubes, and combine and wash according to the immunotube screening system method. Then elute the phage with Trypsin, mix the eluted phage solution with the logarithmic phase Escherichia coli SS320 cells, incubate at 37°C for 30min, spread on 2YT medium, and culture in a 37°C incubator overnight for the next round of screening.
- Human B7-H3-Fc and Human B7-H3-His were labeled with biotin and then bound to Dynabeads magnetic beads.
- the antigen-bound magnetic beads and the antibody gene phage display library were incubated, washed, and eluted for panning, thereby enriching a large number of monoclonal antibodies specific for the antigen.
- the specific method is as follows.
- the prepared alpaca immune library phage suspension was diluted and blocked with 5% BSA, incubated with Dynabeads, and the phages after negative screening incubation were collected.
- the magnetic beads were bound and washed with Human B7-H3-Fc or Human B7-H3-His, and 5% BSA was incubated with the magnetic beads.
- the phage suspension collected after negative screening was incubated with Dynabeads coated and blocked with biotin-labeled antigen, and bound and washed according to the Kingfisher magnetic bead screening system method, and the phages were eluted with Trypsin.
- the phage solution was fully mixed with the logarithmic phase Escherichia coli SS320 cells and incubated at 37°C for 30 minutes, coated in 2YT culture medium, and cultured overnight in a 37°C incubator for the next round of screening.
- the eluted phage solution was diluted 10-fold with logarithmic phase SS320 cells, incubated at 37°C for 30 min, mixed and dropped 2 ⁇ L on the plate, and cultured in a 37°C incubator overnight for detection.
- the phage pools obtained from each round of elution by immunotube screening and magnetic bead screening were diluted 5 times with 5% PBSM and screened by ELISA.
- the 13 nanobodies obtained in Example 2 were constructed as heavy chain antibodies of human IgG1 subtype, i.e., VHH-Fc.
- Material preparation 1. Mobile phase preparation: 150mmol/L PB+NaCl, pH adjusted to 6.0; 2. Sample treatment: dilute the sample concentration to 0.5mg/mL; 3. Agilent HPLC 1100 column (XBridge BEH SEC 3.5 ⁇ m, 7.8mm ⁇ 300mm, Waters) flow rate set to 0.8mL/min, injection volume 20 ⁇ L, detector wavelength 280nm. According to the area normalization method, the percentage of high molecular weight polymers, monomers and low molecular weight polymers in the sample was calculated. The results are shown in Table 4. The purity of VHH-Fc antibody monomers except C184-Fc is greater than 95%.
- Antigens Human B7-H3-His, Mouse B7-H3-Fc and Cyno B7-H3-His were diluted with 1 ⁇ PBS to a concentration of 2 ⁇ g/mL, and coated on 96-well plates at 30 ⁇ L/well at 4°C overnight. The next day, the 96-well plates were washed 3 times with PBST and blocked with 5% skim milk for 2h.
- o B7-H3-His use Anti-human-Fc-HRP (abcam; ab97225); for Mouse B7-H3-Fc, use Anti-VHH1+VHH2-HRP (Genescript, A01861-200, CP0001); for ipilimumab and DX008-BMG-MGC, use Anti-human ⁇ + ⁇ -HRP (Millipore; AP502P; AP506P), and incubate for 1 hour; after incubation, wash the plate six times with PBST and add TMB for color development; according to the color development results, add 2M HCl to terminate the reaction, and read the plate at OD450 using a microplate reader (Molecular Devices, SpecterMax 190).
- the Kientics experimental mode based on GATOR detects the affinity kinetics of VHH antibodies to the antigens Human B7-H3-His and Mouse B7-H3-His.
- DX008-BM-MGC is used as a positive control.
- the antibody to be tested is diluted to 30nM in a buffer containing PBS (10mM PH7.4), 0.02% Tween 20 and 0.2% BSA, and then carried out according to the preset program, with a binding time of 120s and a dissociation time of 120s.
- the antigen is diluted 2 times from 2400nM to 4.69nM.
- KD affinity kinetic constant
- Kon binding constant
- Koff dissociation constant
- the test results are shown in Tables 5 and 6.
- the results showed that the affinities of antibodies A2, A77, B91, and C59 were higher than those of the control antibody, and the affinities of antibodies A3, A83, B102, C357, and D16 were similar to or slightly lower than those of the control antibody, among which A2, A77, B91, C357, and C59 also had affinity for mouse B7-H3 antigen.
- the framework region of the nanobody was humanized and reversely mutated to obtain a heavy chain antibody with a higher degree of humanization while maintaining the affinity of the humanized antibody for the antigen.
- VHH antibody A2 was selected for humanization.
- the antibody sequence was compared with the human antibody germline gene database to find the human germline with high homology to the VHH sequence.
- humanized sequences of different degrees were designed according to the differential sites in the framework region.
- 7 humanized antibodies were obtained: VHH21 to VHH27, and their amino acid sequences are shown in Table 7.
- the expression vectors of humanized antibodies VHH21 to VHH27 were constructed as described in Example 3.1.
- the humanized VHH-Fc antibodies respectively comprised the VHH amino acid sequence described above and the Fc fragment of human IgG1 (SEQ ID NO: 69).
- the expression and purification of the humanized VHH-Fc antibodies are described in Example 3.2.
- the sequences of the humanized VHH-Fc antibodies are shown in Table 7.
- VHH21 to VHH27 The affinity of humanized VHH-Fc antibodies (VHH21 to VHH27) to the antigens Human B7-H3-His, Mouse B7-H3-His and Cyno B7-H3-His was determined by ELISA and compared with the parental antibody A2-VHH-Fc.
- the specific method is as follows: dilute the antigen Human B7-H3-His, Mouse B7-H3 His or Cyno B7-H3-His with 1 ⁇ PBS to a concentration of 2 ⁇ g/mL, and coat 96-well plates with 30 ⁇ L/well at 4°C overnight.
- the GATOR-based Kientics experimental model was used to detect the affinity kinetics of humanized VHH-Fc antibodies to the antigens Human B7-H3-His, Mouse B7-H3-His and Cyno B7-H3-His.
- the parent antibody A2 VHH-Fc was used as a positive control. The detection method is shown in Example 6.
- the topoisomerase toxin 0143 (obtained from MCE, catalog number: HY-114233), which is formed by connecting the DNA topoisomerase I inhibitor DX8951 and the protease cleavable linker MC-GGFG, is coupled to the humanized antibody molecule VHH25-Fc of the present application to prepare the VHH25-0143 ADC molecule with a DAR value of about 4.
- the structure of the topoisomerase toxin 0143 is as follows:
- Calu-6 cells were subcutaneously inoculated on the right back of Balb/c nude mice to establish a subcutaneous xenograft mouse model of human lung cancer Calu-6 cell line.
- vehicle control group VHH25-0143 ADC low-dose group (1 mg/kg)
- VHH25-0143 ADC medium-dose group (3 mg/kg)
- VHH25-0143 ADC high-dose group (10 mg/kg)
- the day of grouping was recorded as day 1, and medication was started on the day of grouping, once a week (QW), for a total of 3 times. After medication, the tumor size was measured twice a week, and the results are shown in Figure 6.
- Figure 6 shows that the VHH25-0143 ADC molecule can inhibit tumor growth at three doses, indicating that it has effective anti-tumor activity in vivo.
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Abstract
Description
本国际专利申请要求2024年1月3日提交的中国专利申请号202410009195.X和2024年12月5日提交的中国专利申请号202411783315.8的优先权,它们的全部内容通过引用并入本文用于所有目的。This international patent application claims priority to Chinese Patent Application No. 202410009195.X filed on January 3, 2024 and Chinese Patent Application No. 202411783315.8 filed on December 5, 2024, the entire contents of which are incorporated herein by reference for all purposes.
本发明属于生物技术领域,尤其涉及抗原结合蛋白、重链抗体和纳米抗体、及其用途。The present invention belongs to the field of biotechnology, and in particular relates to antigen binding proteins, heavy chain antibodies and nano antibodies, and uses thereof.
B7-H3(CD276)是B7家族蛋白质中的一员,在癌症的发展中起着关键作用。作为免疫检查点的靶点之一,B7-H3选择性地表达在肿瘤细胞和肿瘤微环境中的免疫细胞中,参与了肿瘤细胞的增殖、转移并与治疗耐药有关。B7-H3 (CD276) is a member of the B7 family of proteins and plays a key role in the development of cancer. As one of the targets of immune checkpoints, B7-H3 is selectively expressed in tumor cells and immune cells in the tumor microenvironment, and is involved in tumor cell proliferation and metastasis and is associated with treatment resistance.
B7-H3在正常组织和肿瘤组织中的蛋白质表达水平有着巨大的差异,在多种肿瘤组织,如前列腺癌,胰腺癌,肝细胞癌等中大量表达,而在正常组织中鲜有表达(Zhou WT,Jin WL.B7-H3/CD276:An Emerging Cancer Immunother-apy.Front Immunol.2021;12:701006.)。利用这一特性,用药物靶向B7-H3可以特异性的杀伤癌症组织,而对健康细胞的伤害降至最低。这些特性使B7-H3成为一个有希望的癌症治疗靶点。There is a huge difference in the protein expression level of B7-H3 in normal tissues and tumor tissues. It is expressed in large quantities in a variety of tumor tissues, such as prostate cancer, pancreatic cancer, hepatocellular carcinoma, etc., but rarely expressed in normal tissues (Zhou WT, Jin WL. B7-H3/CD276: An Emerging Cancer Immunother-apy. Front Immunol. 2021; 12: 701006.). Taking advantage of this feature, targeting B7-H3 with drugs can specifically kill cancer tissues while minimizing damage to healthy cells. These characteristics make B7-H3 a promising target for cancer treatment.
纳米抗体(Nanobody)是一种新型抗体,又称单域抗体,是通过克隆骆驼科等动物体内含有的天然缺失轻链的重链抗体可变区(variable domain of the heavy chain of heavy-chain antibody,VHH)得到的。相比于常规单克隆抗体,纳米抗体具有分子质量小、可溶性好、稳定性强、免疫原性弱、穿透性强、特异性高、人源化简单、高表达、易于生产等优点。纳米抗体在生物技术和医疗领域有很好的应用前景,目前已有纳米抗体药物获批上市。应用纳米抗体技术研发抗B7-H3的治疗性抗体具有很好的前景。Nanobody is a new type of antibody, also known as single-domain antibody, which is obtained by cloning the variable domain of the heavy chain of heavy-chain antibody (VHH) naturally lacking light chains in animals such as camelids. Compared with conventional monoclonal antibodies, nanobodies have the advantages of small molecular weight, good solubility, strong stability, weak immunogenicity, strong penetration, high specificity, simple humanization, high expression, and easy production. Nanobodies have good application prospects in the fields of biotechnology and medicine, and nanobody drugs have been approved for marketing. The application of nanobody technology to develop therapeutic antibodies against B7-H3 has good prospects.
本公开提供了特异性识别并结合B7-H3的B7-H3结合蛋白,特别是特异性识别并结合B7-H3的纳米抗体(也称为B7-H3单域抗体,或B7-H3 VHH抗体)以及重链抗体。The present disclosure provides B7-H3 binding proteins that specifically recognize and bind to B7-H3, in particular, nanobodies (also called B7-H3 single domain antibodies, or B7-H3 VHH antibodies) and heavy chain antibodies that specifically recognize and bind to B7-H3.
因此,在本公开的第一方面,提供了B7-H3结合蛋白。根据本发明实施方案的B7-H3结合蛋白可特异性靶向并结合B7-H3。Therefore, in a first aspect of the present disclosure, a B7-H3 binding protein is provided. The B7-H3 binding protein according to an embodiment of the present invention can specifically target and bind to B7-H3.
在一些实施方案中,所述结合蛋白包含免疫球蛋白单一可变结构域,其中所述免疫球蛋白单一可变结构域包含SEQ ID NO:1-13中的任一个所示的VHH中包含的CDR1、CDR2和CDR3。在一些实施方案中,所述CDR1、CDR2和CDR3是根据Kabat、AbM、Chothia或IMGT编码的。In some embodiments, the binding protein comprises an immunoglobulin single variable domain, wherein the immunoglobulin single variable domain comprises CDR1, CDR2 and CDR3 contained in the VHH shown in any one of SEQ ID NO: 1-13. In some embodiments, the CDR1, CDR2 and CDR3 are encoded according to Kabat, AbM, Chothia or IMGT.
在以上所述的B7-H3结合蛋白的一些实施方案中,所述免疫球蛋白单一可变结构域包含CDR1、CDR2和CDR3,所述CDR1、CDR2和CDR3是根据AbM编码的,其中:In some embodiments of the B7-H3 binding protein described above, the immunoglobulin single variable domain comprises CDR1, CDR2 and CDR3, and the CDR1, CDR2 and CDR3 are encoded according to AbM, wherein:
(1)所述CDR1包含与SEQ ID NO:29所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:30所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:31所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(1) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:29, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:30, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:31;
(2)所述CDR1包含与SEQ ID NO:23所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:24所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:25所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(2) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:23, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:24, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:25;
(3)所述CDR1包含与SEQ ID NO:26所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:27所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:28所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(3) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:26, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:27, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:28;
(4)所述CDR1包含与SEQ ID NO:32所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:33所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:34所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(4) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:32, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:33, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:34;
(5)所述CDR1包含与SEQ ID NO:35所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:36所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:37所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(5) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:35, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:36, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:37;
(6)所述CDR1包含与SEQ ID NO:38所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:39所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:40所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(6) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:38, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:39, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:40;
(7)所述CDR1包含与SEQ ID NO:41所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:42所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:43所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(7) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:41, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:42, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:43;
(8)所述CDR1包含与SEQ ID NO:44所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:45所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:46所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(8) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:44, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:45, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:46;
(9)所述CDR1包含与SEQ ID NO:47所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:48所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:49所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(9) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:47, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:48, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:49;
(10)所述CDR1包含与SEQ ID NO:50所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:51所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:52所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(10) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:50, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:51, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:52;
(11)所述CDR1包含与SEQ ID NO:53所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:54所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:55所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;(11) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:53, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:54, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence of SEQ ID NO:55;
(12)所述CDR1包含与SEQ ID NO:56所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:57所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:58所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列;或(12) the CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:56, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:57, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence set forth in SEQ ID NO:58; or
(13)所述CDR1包含与SEQ ID NO:59所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,所述CDR2包含与SEQ ID NO:60所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,并且所述CDR3包含与SEQ ID NO:61所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列。(13) The CDR1 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in SEQ ID NO:59, the CDR2 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in SEQ ID NO:60, and the CDR3 comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in SEQ ID NO:61.
在一些实施方案中,所述免疫球蛋白单一可变结构域包含与SEQ ID NO:1-13中任一个所示的氨基酸序列具有至少85%、至少90%、至少95%或100%同一性的氨基酸序列,或由与SEQ ID NO:1-13中任一个所示的氨基酸序列具有至少80%、至少85%、至少90%、至少95%或100%同一性的氨基酸序列组成。In some embodiments, the immunoglobulin single variable domain comprises an amino acid sequence that is at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in any one of SEQ ID NO: 1-13, or consists of an amino acid sequence that is at least 80%, at least 85%, at least 90%, at least 95% or 100% identical to the amino acid sequence shown in any one of SEQ ID NO: 1-13.
在本公开的一些实施方案中,B7-H3结合蛋白为单价的、二价的或多价的。In some embodiments of the present disclosure, the B7-H3 binding protein is monovalent, bivalent, or multivalent.
在本公开的一些实施方案中,B7-H3结合蛋白为单特异性的、双特异性的或多特异性的。In some embodiments of the present disclosure, the B7-H3 binding protein is monospecific, bispecific, or multispecific.
在本公开的一些实施方案中,所述B7-H3结合蛋白中包含的所述免疫球蛋白单一可变结构域包含重链框架区,并且所述重链框架区的至少一部分来自小鼠抗体、人抗体、灵长类抗体及其突变体中的至少一种。在本公开的一些实施方案中,所述B7-H3结合蛋白中包含的所述重链框架区的至少一部分来自人抗体,优选地,所述免疫球蛋白单一可变结构域包含与SEQ ID NO:14-20中任一个所示的氨基酸序列具有至少80%、至少85%、至少90%、至少95%或100%同一性的氨基酸序列,更优选地,所述免疫球蛋白单一可变结构域包含SEQ ID NO:14-20中任一个所示的氨基酸序列或由SEQ ID NO:14-20中任一个所示的氨基酸序列组成。In some embodiments of the present disclosure, the immunoglobulin single variable domain contained in the B7-H3 binding protein comprises a heavy chain framework region, and at least a portion of the heavy chain framework region is from at least one of a mouse antibody, a human antibody, a primate antibody, and a mutant thereof. In some embodiments of the present disclosure, at least a portion of the heavy chain framework region contained in the B7-H3 binding protein is from a human antibody, preferably, the immunoglobulin single variable domain comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 14-20, more preferably, the immunoglobulin single variable domain comprises or consists of an amino acid sequence shown in any one of SEQ ID NO: 14-20.
在本公开的一些实施方案中,所述B7-H3结合蛋白是重链抗体。在一些优选的实施方案中,所述重链抗体还包含人IgG Fc。在一些更优选的实施方案中,所述重链抗体还包含人IgG1 Fc。在一些具体的实施方案中,所述人IgG1 Fc包含与SEQ ID NO:69所示的氨基酸序列具有至少80%、至少85%、至少90%、至少95%或100%同一性的氨基酸序列,更优选地,所述人IgG1 Fc包含如SEQ ID NO:69所示的氨基酸序列或由如SEQ ID NO:69所示的氨基酸序列组成。在本公开的一些具体的实施方案中,所述重链抗体包含与SEQ ID NO:70-82和SEQ ID NO:62-68中任一个所示的氨基酸序列具有至少80%、至少85%、至少90%、至少95%或100%同一性的氨基酸序列。在本公开的一些实施方案中,所述重链抗体包含SEQ ID NO:70-82和SEQ ID NO:62-68中任一个所示的氨基酸序列或由SEQ ID NO:70-82和SEQ ID NO:62-68中任一个所示的氨基酸序列组成。In some embodiments of the present disclosure, the B7-H3 binding protein is a heavy chain antibody. In some preferred embodiments, the heavy chain antibody further comprises human IgG Fc. In some more preferred embodiments, the heavy chain antibody further comprises human IgG1 Fc. In some specific embodiments, the human IgG1 Fc comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in SEQ ID NO: 69, more preferably, the human IgG1 Fc comprises or consists of an amino acid sequence as shown in SEQ ID NO: 69. In some specific embodiments of the present disclosure, the heavy chain antibody comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 70-82 and SEQ ID NO: 62-68. In some embodiments of the present disclosure, the heavy chain antibody comprises or consists of the amino acid sequence shown in any one of SEQ ID NO:70-82 and SEQ ID NO:62-68.
在本公开的一些实施方案中,所述B7-H3结合蛋白是纳米抗体。在一些实施方案中,所述纳米抗体包含与SEQ ID NO:1-13中任一个所示的氨基酸序列具有至少80%、至少85%、至少90%、至少95%或100%同一性的氨基酸序列。在一些优选的实施方案中,所述纳米抗体包含SEQ ID NO:1-13中任一个所示的氨基酸序列或由SEQ ID NO:1-13中任一个所示的氨基酸序列组成。在一些实施方案中,所述纳米抗体包含与SEQ ID NO:14-20中任一个所示的氨基酸序列具有至少80%、至少85%、至少90%、至少95%或100%同一性的氨基酸序列。在一些优选的实施方案中,所述纳米抗体包含SEQ ID NO:14-20中任一个所示的氨基酸序列或由SEQ ID NO:14-20中任一个所示的氨基酸序列组成。In some embodiments of the present disclosure, the B7-H3 binding protein is a nanobody. In some embodiments, the nanobody comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 1-13. In some preferred embodiments, the nanobody comprises an amino acid sequence shown in any one of SEQ ID NO: 1-13 or consists of an amino acid sequence shown in any one of SEQ ID NO: 1-13. In some embodiments, the nanobody comprises an amino acid sequence having at least 80%, at least 85%, at least 90%, at least 95% or 100% identity with the amino acid sequence shown in any one of SEQ ID NO: 14-20. In some preferred embodiments, the nanobody comprises an amino acid sequence shown in any one of SEQ ID NO: 14-20 or consists of an amino acid sequence shown in any one of SEQ ID NO: 14-20.
具有SEQ ID NO:1所示的氨基酸序列的纳米抗体对应于本公开的克隆C23;具有SEQ ID NO:2所示氨基酸序列的纳米抗体对应于本公开的克隆A13;具有SEQ ID NO:3所示氨基酸序列的纳米抗体对应于本公开的克隆A2;具有SEQ ID NO:4所示氨基酸序列的纳米抗体对应于本公开的克隆A3;具有SEQ ID NO:5所示氨基酸序列的纳米抗体对应于本公开的克隆A77;具有SEQ ID NO:6所示氨基酸序列的纳米抗体对应于本公开的克隆A83;具有SEQ ID NO:7所示氨基酸序列的纳米抗体对应于本公开的克隆B102;具有SEQ ID NO:8所示氨基酸序列的纳米抗体对应于本公开的克隆B91;具有SEQ ID NO:9所示氨基酸序列的纳米抗体对应于本公开的克隆C184;具有SEQ ID NO:10所示氨基酸序列的纳米抗体对应于本公开的克隆C357;具有SEQ ID NO:11所示氨基酸序列的纳米抗体对应于本公开的克隆C59;具有SEQ ID NO:12所示氨基酸序列的纳米抗体对应于本公开的克隆D16;具有SEQ ID NO:13所示氨基酸序列的纳米抗体对应于本公开的克隆A14;具有SEQ ID NO:14所示氨基酸序列的纳米抗体对应于本公开的克隆VHH21;具有SEQ ID NO:15所示氨基酸序列的纳米抗体对应于本公开的克隆VHH22;具有SEQ ID NO:16所示氨基酸序列的纳米抗体对应于本公开的克隆VHH23;具有SEQ ID NO:17所示氨基酸序列的纳米抗体对应于本公开的克隆VHH24;具有SEQ ID NO:18所示氨基酸序列的纳米抗体对应于本公开的克隆VHH25;具有SEQ ID NO:19所示氨基酸序列的纳米抗体对应于本公开的克隆VHH26;并且具有SEQ ID NO:20所示氨基酸序列的纳米抗体对应于本公开的克隆VHH27。The Nanobody with the amino acid sequence shown in SEQ ID NO:1 corresponds to clone C23 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:2 corresponds to clone A13 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:3 corresponds to clone A2 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:4 corresponds to clone A3 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:5 corresponds to clone A77 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:6 corresponds to clone A83 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:7 corresponds to clone B102 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:8 corresponds to clone B91 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:9 corresponds to clone C184 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:10 corresponds to clone C357 of the present disclosure; The Nanobody with the amino acid sequence shown in SEQ ID NO:11 corresponds to the clone C59 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:12 corresponds to the clone D16 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:13 corresponds to the clone A14 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:14 corresponds to the clone VHH21 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:15 corresponds to the clone VHH22 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:16 corresponds to the clone VHH23 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:17 corresponds to the clone VHH24 of the present disclosure. The Nanobody with the amino acid sequence shown in SEQ ID NO:16 corresponds to the clone VHH23 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:17 corresponds to the clone VHH24 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:18 corresponds to the clone VHH25 of the present disclosure; the Nanobody with the amino acid sequence shown in SEQ ID NO:19 corresponds to the clone VHH26 of the present disclosure; and the Nanobody with the amino acid sequence shown in SEQ ID NO:20 corresponds to the clone VHH27 of the present disclosure.
在本公开的第二方面,提供了融合蛋白,其包含本公开的第一方面所述的B7-H3结合蛋白。In a second aspect of the present disclosure, a fusion protein is provided, which comprises the B7-H3 binding protein described in the first aspect of the present disclosure.
在本公开的第三方面,提供了核酸分子,其编码本公开的第一方面所述的B7-H3结合蛋白或本公开的第二方面所述的融合蛋白。在一些优选的实施方案中,所述核酸分子为DNA。In the third aspect of the present disclosure, a nucleic acid molecule is provided, which encodes the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure. In some preferred embodiments, the nucleic acid molecule is DNA.
在本公开的第四方面,提供了包含本公开的第三方面所述的核酸分子的表达载体。如上所述,核酸分子编码本公开的第一方面所述的B7-H3结合蛋白或本公开的第二方面所述的融合蛋白。因此,根据本发明实施方案引入宿主细胞的表达载体可以在适合蛋白质表达的条件下表达本公开的第一方面所述的B7-H3结合蛋白或本公开的第二方面所述的融合蛋白。在本公开的一些实施方案中,表达载体为原核表达载体或真核表达载体。In the fourth aspect of the present disclosure, an expression vector comprising the nucleic acid molecule described in the third aspect of the present disclosure is provided. As described above, the nucleic acid molecule encodes the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure. Therefore, the expression vector introduced into the host cell according to the embodiment of the present invention can express the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure under conditions suitable for protein expression. In some embodiments of the present disclosure, the expression vector is a prokaryotic expression vector or a eukaryotic expression vector.
在本公开的第五方面,提供了包含本公开的第三方面所述的核酸分子或本公开的第四方面所述的表达载体的细胞。在本公开的一些实施方案中,所述细胞通过将本公开的第四方面所述的表达载体引入宿主细胞而获得。在本公开的一些实施方案中,所述细胞为原核细胞或真核细胞。在本公开的一些实施方案中,所述细胞为哺乳动物细胞,例如CHO细胞。In a fifth aspect of the present disclosure, a cell comprising the nucleic acid molecule described in the third aspect of the present disclosure or the expression vector described in the fourth aspect of the present disclosure is provided. In some embodiments of the present disclosure, the cell is obtained by introducing the expression vector described in the fourth aspect of the present disclosure into a host cell. In some embodiments of the present disclosure, the cell is a prokaryotic cell or a eukaryotic cell. In some embodiments of the present disclosure, the cell is a mammalian cell, such as a CHO cell.
在本公开的第六方面,提供了缀合物。在本公开的一些实施方案中,缀合物包含本公开的第一方面所述的B7-H3结合蛋白或本公开的第二方面所述的融合蛋白,还包含与所述B7-H3结合蛋白或融合蛋白缀合的治疗剂、诊断剂或显像剂。在一些实施方案中,本公开的第一方面所述的B7-H3结合蛋白或本公开的第二方面所述的融合蛋白与治疗剂、诊断剂或显像剂之间具有接头。在一些实施方案中,本公开的第一方面所述的B7-H3结合蛋白或本公开的第二方面所述的融合蛋白通过接头与治疗剂、诊断剂或显像剂缀合。在一些实施方案中,接头包含可切割接头或不可切割接头。在一些实施方案中,接头选自MC(6-马来酰亚胺基己酰基)、Val-Cit(缬氨酸-瓜氨酸)、PABC(对-氨基-苄氧羰基)、DMEA(二甲基乙胺)、Val-Cit-PABC、MC-Val-Cit-PABC、MC-Val-Cit-PABC-DMEA、GGFG(甘氨酸-甘氨酸-苯丙氨酸-甘氨酸)、MC-GGFG、AcBut(4-(4-乙酰苯氧基)-丁酸)和AcBut-二甲基酰肼,优选MC-GGFG。在本公开的一些实施方案中,治疗剂为小分子细胞毒性药物。在一些实施方案中,治疗剂选自拓扑异构酶抑制剂、微管抑制剂、抗生素、DNA合成抑制剂、RNA聚合酶II抑制剂和RNA剪接体抑制剂,优选拓扑异构酶抑制剂。在一些实施方案中,治疗剂选自依喜替康(DX8951)、MMAE、MMAF、多卡霉素(duocarmycin)、DM1、DM4、SN-38、Dxd、卡里奇霉素(calicheamicin)、多柔比星和PBDs(苯二氮卓类),优选依喜替康。在一些实施方案中,由接头和治疗剂连接形成的部分具有以下结构:
In the sixth aspect of the present disclosure, a conjugate is provided. In some embodiments of the present disclosure, the conjugate comprises the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure, and further comprises a therapeutic agent, a diagnostic agent, or an imaging agent conjugated to the B7-H3 binding protein or the fusion protein. In some embodiments, there is a joint between the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure and the therapeutic agent, the diagnostic agent, or the imaging agent. In some embodiments, the B7-H3 binding protein described in the first aspect of the present disclosure or the fusion protein described in the second aspect of the present disclosure is conjugated to the therapeutic agent, the diagnostic agent, or the imaging agent through a joint. In some embodiments, the joint comprises a cleavable joint or a non-cleavable joint. In some embodiments, the linker is selected from MC (6-maleimidocaproyl), Val-Cit (valine-citrulline), PABC (p-amino-benzyloxycarbonyl), DMEA (dimethylethylamine), Val-Cit-PABC, MC-Val-Cit-PABC, MC-Val-Cit-PABC-DMEA, GGFG (glycine-glycine-phenylalanine-glycine), MC-GGFG, AcBut (4-(4-acetylphenoxy)-butyric acid) and AcBut-dimethylhydrazide, preferably MC-GGFG. In some embodiments of the present disclosure, the therapeutic agent is a small molecule cytotoxic drug. In some embodiments, the therapeutic agent is selected from topoisomerase inhibitors, microtubule inhibitors, antibiotics, DNA synthesis inhibitors, RNA polymerase II inhibitors and RNA spliceosome inhibitors, preferably topoisomerase inhibitors. In some embodiments, the therapeutic agent is selected from Exitecan (DX8951), MMAE, MMAF, duocarmycin, DM1, DM4, SN-38, Dxd, calicheamicin, doxorubicin and PBDs (benzodiazepines), preferably Exitecan. In some embodiments, the part formed by the connection of the linker and the therapeutic agent has the following structure:
根据本公开的第六方面所述的缀合物可以在所述B7-H3结合蛋白或融合蛋白的引导下靶向并作用于包含B7-H3的靶细胞。The conjugate according to the sixth aspect of the present disclosure can be targeted and act on target cells containing B7-H3 under the guidance of the B7-H3 binding protein or fusion protein.
在本公开的第七方面,提供了组合物,所述组合物包含本公开的第一方面所述的B7-H3结合蛋白、本公开的第二方面所述的融合蛋白、本公开的第三方面所述的核酸、本公开的第四方面所述的表达载体、本公开的第五方面所述的重组细胞、和/或本公开的第六方面所述的缀合物。在本公开的一些实施方案中,组合物为药物组合物。在优选的实施方案中,该药物组合物还包含药学上可接受的载剂、赋形剂或稀释剂。In the seventh aspect of the present disclosure, a composition is provided, the composition comprising the B7-H3 binding protein described in the first aspect of the present disclosure, the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, and/or the conjugate described in the sixth aspect of the present disclosure. In some embodiments of the present disclosure, the composition is a pharmaceutical composition. In a preferred embodiment, the pharmaceutical composition further comprises a pharmaceutically acceptable carrier, excipient or diluent.
在本公开的第八方面,提供了本公开的第一方面所述的B7-H3结合蛋白、本公开的第二方面所述的融合蛋白、本公开的第三方面所述的核酸、本公开的第四方面所述的表达载体、本公开的第五方面所述的重组细胞、本公开的第六方面所述的缀合物、和/或本公开的第七方面所述的组合物在制备用于预防、治疗或减轻B7-H3相关的疾病的药物中的用途。In the eighth aspect of the present disclosure, provided is the use of the B7-H3 binding protein described in the first aspect of the present disclosure, the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, the conjugate described in the sixth aspect of the present disclosure, and/or the composition described in the seventh aspect of the present disclosure in the preparation of a medicament for preventing, treating or alleviating B7-H3-related diseases.
还提供了本公开的第一方面所述的B7-H3结合蛋白、本公开的第二方面所述的融合蛋白、本公开的第三方面所述的核酸、本公开的第四方面所述的表达载体、本公开的第五方面所述的重组细胞、本公开的第六方面所述的缀合物、和/或本公开的第七方面所述的组合物与另一药剂的组合在制备用于预防、治疗或减轻B7-H3相关的疾病的药物中的用途。在一些实施方案中,所述另一药剂为免疫治疗剂或化疗剂。Also provided is the use of the combination of the B7-H3 binding protein described in the first aspect of the disclosure, the fusion protein described in the second aspect of the disclosure, the nucleic acid described in the third aspect of the disclosure, the expression vector described in the fourth aspect of the disclosure, the recombinant cell described in the fifth aspect of the disclosure, the conjugate described in the sixth aspect of the disclosure, and/or the composition described in the seventh aspect of the disclosure and another agent in the preparation of a drug for preventing, treating or alleviating a disease associated with B7-H3. In some embodiments, the other agent is an immunotherapeutic agent or a chemotherapeutic agent.
在本公开的第九方面,提供了本公开的第一方面所述的B7-H3结合蛋白、本公开的第二方面所述的融合蛋白、本公开的第三方面所述的核酸、本公开的第四方面所述的表达载体、本公开的第五方面所述的重组细胞、本公开的第六方面所述的缀合物、和/或本公开的第七方面所述的组合物,其用于预防、治疗或减轻由B7-H3相关的疾病。In the ninth aspect of the present disclosure, provided is the B7-H3 binding protein described in the first aspect of the present disclosure, the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, the conjugate described in the sixth aspect of the present disclosure, and/or the composition described in the seventh aspect of the present disclosure, which are used for preventing, treating or alleviating diseases associated with B7-H3.
在本公开的第十方面,提供了预防、治疗或减轻受试者中B7-H3相关的疾病的方法。在一些实施方案中,所述方法包括向所述受试者施用本公开的第一方面所述的B7-H3结合蛋白、本公开的第二方面所述的融合蛋白、本公开的第三方面所述的核酸、本公开的第四方面所述的表达载体、本公开的第五方面所述的重组细胞、本公开的第六方面所述的缀合物、和/或本公开的第七方面所述的组合物。In the tenth aspect of the present disclosure, a method for preventing, treating or alleviating a B7-H3-related disease in a subject is provided. In some embodiments, the method comprises administering to the subject the B7-H3 binding protein described in the first aspect of the present disclosure, the fusion protein described in the second aspect of the present disclosure, the nucleic acid described in the third aspect of the present disclosure, the expression vector described in the fourth aspect of the present disclosure, the recombinant cell described in the fifth aspect of the present disclosure, the conjugate described in the sixth aspect of the present disclosure, and/or the composition described in the seventh aspect of the present disclosure.
在本公开的第八方面至第十方面的一些实施方案中,所述B7-H3相关的疾病或病症是B7-H3介导的疾病或病症。在一些实施方案中,所述B7-H3介导的疾病或病症是肿瘤。在一些实施方案中,B7-H3介导的疾病或病症是实体瘤和/或血液瘤。在一些具体的实施方案中,B7-H3介导的疾病或病症是选自由以下组成的组的一种或多种肿瘤:肺癌、乳腺癌、前列腺癌、胰腺癌、结直肠癌、黑色素瘤、肝癌、卵巢癌、膀胱癌、胃癌、食道癌和肾癌。在一些具体的实施方案中,B7-H3介导的疾病或病症是选自由以下组成的组的一种或多种肿瘤:肾上腺肿瘤、艾滋病相关癌症、肺泡软部肉瘤、星形细胞肿瘤、骨癌、脑和脊髓癌、转移性脑肿瘤、B细胞癌症、癌症、颈动脉体肿瘤、软骨肉瘤、脊索瘤、皮肤良性纤维组织细胞瘤、促结缔组织增生性小圆细胞瘤、室管膜瘤、尤因氏瘤、骨外黏液样软骨肉瘤、成骨不全症、骨纤维发育不良、胆囊癌或胆管癌、妊娠滋养细胞病、生殖细胞瘤、头颈癌症,肝细胞癌、胰岛细胞瘤、卡波西肉瘤、白血病、脂肉瘤/恶性脂肪瘤、淋巴瘤、髓母细胞瘤、脑膜瘤、多发性内分泌瘤、多发性骨髓瘤、骨髓增生异常综合征、神经母细胞瘤,甲状腺乳头状癌、甲状旁腺瘤、儿童癌症、周围神经鞘肿瘤、黑色素细胞瘤、垂体肿瘤、后葡萄膜黑色素瘤、肾转移性癌症、横纹肌样瘤、横纹肌肉瘤、肉瘤、皮肤癌、软组织肉瘤、鳞状细胞癌症、胃癌、滑膜肉瘤、睾丸癌,胸腺瘤、和甲状腺转移性癌。在优选的实施方案中,B7-H3介导的疾病或病症是肺癌。In some embodiments of the eighth aspect to the tenth aspect of the present disclosure, the B7-H3-related disease or condition is a B7-H3-mediated disease or condition. In some embodiments, the B7-H3-mediated disease or condition is a tumor. In some embodiments, the B7-H3-mediated disease or condition is a solid tumor and/or a hematological tumor. In some specific embodiments, the B7-H3-mediated disease or condition is one or more tumors selected from the group consisting of lung cancer, breast cancer, prostate cancer, pancreatic cancer, colorectal cancer, melanoma, liver cancer, ovarian cancer, bladder cancer, gastric cancer, esophageal cancer and kidney cancer. In some specific embodiments, the B7-H3 mediated disease or condition is one or more tumors selected from the group consisting of: adrenal tumors, AIDS-related cancers, alveolar soft part sarcomas, astrocytic tumors, bone cancer, brain and spinal cord cancer, metastatic brain tumors, B cell cancers, cancer, carotid body tumors, chondrosarcomas, chordomas, benign fibrous histiocytomas of the skin, desmoplastic small round cell tumors, ependymomas, Ewing's tumors, extraosseous myxoid chondrosarcomas, osteogenesis imperfecta, fibrous dysplasia of bone, gallbladder cancer or bile duct cancer, gestational trophoblastic disease, germ cell tumors , head and neck cancer, hepatocellular carcinoma, islet cell tumor, Kaposi's sarcoma, leukemia, liposarcoma/malignant lipoma, lymphoma, medulloblastoma, meningioma, multiple endocrine neoplasms, multiple myeloma, myelodysplastic syndrome, neuroblastoma, papillary thyroid carcinoma, parathyroid tumor, childhood cancer, peripheral nerve sheath tumor, melanocytoma, pituitary tumor, posterior uveal melanoma, renal metastatic cancer, rhabdoid tumor, rhabdomyosarcoma, sarcoma, skin cancer, soft tissue sarcoma, squamous cell cancer, gastric cancer, synovial sarcoma, testicular cancer, thymoma, and thyroid metastatic cancer. In a preferred embodiment, the B7-H3 mediated disease or condition is lung cancer.
在本公开的第十一方面,提供了用于检测B7-H3或包含B7-H3的细胞的试剂盒。在一些实施方案中,所述试剂盒包含本公开的第一方面所述的B7-H3结合蛋白、或本公开的第六方面所述的缀合物。In the eleventh aspect of the present disclosure, a kit for detecting B7-H3 or cells containing B7-H3 is provided. In some embodiments, the kit comprises the B7-H3 binding protein of the first aspect of the present disclosure or the conjugate of the sixth aspect of the present disclosure.
在本公开的第十二方面,提供了本公开的第一方面所述的B7-H3结合蛋白或本公开的第六方面所述的缀合物在制备用于检测B7-H3或包含B7-H3的细胞的试剂盒中的用途。In the twelfth aspect of the present disclosure, provided is use of the B7-H3 binding protein of the first aspect of the present disclosure or the conjugate of the sixth aspect of the present disclosure in preparing a kit for detecting B7-H3 or cells containing B7-H3.
在本公开的第十三方面,提供了本公开的第一方面所述的B7-H3结合蛋白、或本公开的第六方面所述的缀合物,其用于检测B7-H3或包含B7-H3的细胞。In the thirteenth aspect of the present disclosure, provided is the B7-H3 binding protein of the first aspect of the present disclosure or the conjugate of the sixth aspect of the present disclosure, which is used for detecting B7-H3 or cells containing B7-H3.
在本公开的第十四方面,提供了检测B7-H3或包含B7-H3的细胞的方法。在本公开的一些实施方案中,该方法包括将本公开的第一方面所述的B7-H3结合蛋白、或本公开的第六方面所述的缀合物与待测样品接触。还提供了确定B7-H3的存在和/或含量的方法,其包括将本公开的第一方面所述的B7-H3结合蛋白、和/或本公开的第六方面所述的缀合物与待测样品接触。In the fourteenth aspect of the present disclosure, a method for detecting B7-H3 or a cell containing B7-H3 is provided. In some embodiments of the present disclosure, the method comprises contacting the B7-H3 binding protein described in the first aspect of the present disclosure or the conjugate described in the sixth aspect of the present disclosure with a sample to be tested. A method for determining the presence and/or content of B7-H3 is also provided, comprising contacting the B7-H3 binding protein described in the first aspect of the present disclosure and/or the conjugate described in the sixth aspect of the present disclosure with a sample to be tested.
在本公开的第十五方面,提供了嵌合抗原受体。在本公开的一些实施方案中,嵌合抗原受体包含抗原识别结构域、铰链区、跨膜结构域、和胞内结构域(包括共刺激域和信号转导域),所述抗原识别结构域包含本公开的第一方面所述的B7-H3结合蛋白。In the fifteenth aspect of the present disclosure, a chimeric antigen receptor is provided. In some embodiments of the present disclosure, the chimeric antigen receptor comprises an antigen recognition domain, a hinge region, a transmembrane domain, and an intracellular domain (including a co-stimulatory domain and a signal transduction domain), and the antigen recognition domain comprises the B7-H3 binding protein described in the first aspect of the present disclosure.
下面将描述更多的方面和优点,其至少一部分将在以下结合附图的描述中变得清楚,和/或从下文描述的实施方案中对本领域普通技术人员显而易见。Further aspects and advantages will be described below, at least part of which will become apparent from the following description in conjunction with the accompanying drawings, and/or will be apparent to those of ordinary skill in the art from the embodiments described below.
图1示出了分别使用对应HumanB7-H3抗原或Mouse B7-H3抗原对初筛33个序列独特的克隆所表达的VHH上清进行ELISA测定的结果。图1A示出了使用HumanB7-H3-Fc抗原对A2、A3、A9、A13、A14、A35、A75、A77、A80、A83、A84、A94克隆所表达的VHH上清进行ELISA测定的结果。图1B示出了使用Mouse B7-H3-Fc抗原对A2、A3、A9、A13、A14、A35、A75、A77、A80、A83、A84、A94克隆所表达的VHH上清进行ELISA测定的结果。图1C示出了使用HumanB7-H3-Fc抗原对B5、B81、B90、B91、B102、B103、B137克隆所表达的VHH上清进行ELISA测定的结果。图1D示出了使用Mouse B7-H3-Fc抗原对B5、B81、B90、B91、B102、B103、B137克隆所表达的VHH上清进行ELISA测定的结果。图1E示出了使用HumanB7-H3-Fc抗原对C13、C17、C23、C52、C58、C59、C80、C123、C130、C184、C217、C221、C340和C357克隆所表达的VHH上清进行ELISA测定的结果。图1F示出了使用Mouse B7-H3-Fc抗原对C13、C17、C23、C52、C58、C59、C80、C123、C130、C184、C217、C221、C340和C357克隆所表达的VHH上清进行ELISA测定的结果。图1G示出了使用HumanB7-H3-Fc抗原对C157、C190克隆所表达的VHH上清进行ELISA测定的结果。图1H示出了使用Mouse B7-H3-Fc抗原对C157、C190克隆所表达的VHH上清进行ELISA测定的结果。图1I示出了使用HumanB7-H3-Fc抗原对D9、D16、D22、D29、D37克隆所表达的VHH上清进行ELISA测定的结果。图1J示出了使用Mouse B7-H3-Fc抗原对D9、D16、D22、D29、D37克隆所表达的VHH上清进行ELISA测定的结果。Figure 1 shows the results of ELISA assays of VHH supernatants expressed by 33 clones with unique sequences in the initial screening using the corresponding Human B7-H3 antigen or Mouse B7-H3 antigen. Figure 1A shows the results of ELISA assays of VHH supernatants expressed by A2, A3, A9, A13, A14, A35, A75, A77, A80, A83, A84, and A94 clones using the Human B7-H3-Fc antigen. Figure 1B shows the results of ELISA assays of VHH supernatants expressed by A2, A3, A9, A13, A14, A35, A75, A77, A80, A83, A84, and A94 clones using the Mouse B7-H3-Fc antigen. Figure 1C shows the results of ELISA assays of VHH supernatants expressed by B5, B81, B90, B91, B102, B103, and B137 clones using Human B7-H3-Fc antigen. Figure 1D shows the results of ELISA assays of VHH supernatants expressed by B5, B81, B90, B91, B102, B103, and B137 clones using Mouse B7-H3-Fc antigen. Figure 1E shows the results of ELISA assays of VHH supernatants expressed by C13, C17, C23, C52, C58, C59, C80, C123, C130, C184, C217, C221, C340, and C357 clones using Human B7-H3-Fc antigen. Figure 1F shows the results of ELISA assays of VHH supernatants expressed by C13, C17, C23, C52, C58, C59, C80, C123, C130, C184, C217, C221, C340, and C357 clones using Mouse B7-H3-Fc antigen. Figure 1G shows the results of ELISA assays of VHH supernatants expressed by C157 and C190 clones using Human B7-H3-Fc antigen. Figure 1H shows the results of ELISA assays of VHH supernatants expressed by C157 and C190 clones using Mouse B7-H3-Fc antigen. Figure 1I shows the results of ELISA assays of VHH supernatants expressed by D9, D16, D22, D29, and D37 clones using Human B7-H3-Fc antigen. Figure 1J shows the results of ELISA assay of VHH supernatants expressed by D9, D16, D22, D29, and D37 clones using Mouse B7-H3-Fc antigen.
图2示出了使用Human B7-H3-His对从构建体表达并纯化的VHH-Fc抗体进行ELISA检测的结果。Figure 2 shows the results of ELISA detection of VHH-Fc antibodies expressed and purified from the construct using Human B7-H3-His.
图3示出了使用Mouse B7-H3-Fc对从构建体表达并纯化的VHH-Fc抗体进行ELISA检测的结果。Figure 3 shows the results of ELISA detection of VHH-Fc antibodies expressed and purified from the construct using Mouse B7-H3-Fc.
图4示出了使用Cyno B7-H3-His对从构建体表达并纯化的VHH-Fc抗体进行ELISA检测的结果。Figure 4 shows the results of ELISA detection of VHH-Fc antibodies expressed and purified from the construct using Cyno B7-H3-His.
图5示出了人源化抗体VHH21-Fc、VHH22-Fc、VHH23-Fc、VHH24-Fc、VHH25-Fc、VHH26-Fc、VHH27-Fc与抗原的结合活性。图5A示出了人源化抗体与Human B7-H3-His的结合活性,图5B示出了人源化抗体与Mouse B7-H3 His的结合活性,图5C示出了人源化抗体与Cyno B7-H3 His的结合活性。Figure 5 shows the binding activity of humanized antibodies VHH21-Fc, VHH22-Fc, VHH23-Fc, VHH24-Fc, VHH25-Fc, VHH26-Fc, and VHH27-Fc to antigens. Figure 5A shows the binding activity of humanized antibodies to Human B7-H3-His, Figure 5B shows the binding activity of humanized antibodies to Mouse B7-H3 His, and Figure 5C shows the binding activity of humanized antibodies to Cyno B7-H3 His.
图6示出了在Calu-6人源肺癌皮下移植肿瘤小鼠模型中,人源化抗体VHH25-0143ADC分子在不同剂量下的体内抗肿瘤药效,给药剂量为1mg/kg,3mg/kg和10mg/kg,给药频次为每周给药一次(QW),共给药3次。Figure 6 shows the in vivo antitumor efficacy of the humanized antibody VHH25-0143ADC molecule at different doses in the Calu-6 human lung cancer subcutaneous transplanted tumor mouse model. The dosage was 1 mg/kg, 3 mg/kg and 10 mg/kg, and the frequency of administration was once a week (QW), for a total of 3 times.
发明详述DETAILED DESCRIPTION OF THE INVENTION
通过结合附图对以下实施方案的详细描述,本发明的上述特征和优点及其附加特征和优点将在下文中得到更清楚的理解。The above features and advantages of the present invention and additional features and advantages thereof will be more clearly understood from the following detailed description of the embodiments in conjunction with the accompanying drawings.
此处参照附图描述的实施方案是解释性的、说明性的,并用于普遍理解本发明。实施方案不应解释为限制本发明的范围。相同或相似的要素和具有相同或相似功能的要素在整体描述中使用相同的附图标记表示。The embodiments described herein with reference to the accompanying drawings are explanatory, illustrative, and are used for a general understanding of the present invention. The embodiments should not be construed as limiting the scope of the present invention. The same or similar elements and elements with the same or similar functions are represented by the same reference numerals in the overall description.
除非另有说明或定义,否则所使用的所有术语都具有技术人员所熟知的本领域通常的含义。例如参考标准手册。Unless otherwise stated or defined, all terms used have the ordinary meaning in the art known to the skilled person, for example with reference to standard manuals.
除非另有说明,否则术语“免疫球蛋白序列”,无论其在本文中用于指重链抗体还是常规的4链抗体,均用作一般术语,包括全长抗体、其单链,以及其所有部分、结构域或片段(包括但不限于抗原结合结构域或片段,分别例如VHH结构域或VH/VL结构域)。此外,本文所用的术语“序列”(例如,“免疫球蛋白序列”、“抗体序列”、“可变结构域序列”、“VHH序列”或“蛋白质序列”等术语)通常应理解为包括相关氨基酸序列以及编码相关氨基酸序列的核酸序列或核苷酸序列,除非上下文需要更有限的解释。Unless otherwise indicated, the term "immunoglobulin sequence", whether it is used herein to refer to a heavy chain antibody or a conventional 4-chain antibody, is used as a general term to include full-length antibodies, single chains thereof, and all parts, domains or fragments thereof (including but not limited to antigen binding domains or fragments, such as VHH domains or VH / VL domains, respectively). In addition, the term "sequence" used herein (e.g., "immunoglobulin sequence", "antibody sequence", "variable domain sequence", " VHH sequence" or "protein sequence" and other terms) should generally be understood to include the relevant amino acid sequence and the nucleic acid sequence or nucleotide sequence encoding the relevant amino acid sequence, unless the context requires a more limited interpretation.
除非另有说明,否则如技术人员将清楚的,所有未具体详细描述的方法、步骤、技术和操作可以和已经以本身已知的方式进行。例如再次参考本文提及的标准手册和通常背景技术以及其中引用的进一步参考文献。Unless otherwise indicated, as will be clear to the skilled person, all methods, steps, techniques and operations not specifically described in detail can and have been performed in a manner known per se. For example, reference is again made to the standard manuals and general background art mentioned herein and to the further references cited therein.
为了比较两个或更多个核苷酸序列,第一序列和第二序列之间的“序列同一性”百分比可以通过用[第一序列中与第二序列中相应位置处的核苷酸相同的核苷酸数]除以[第一序列中的核苷酸总数]并乘以[100%],其中第二核苷酸序列中每个核苷酸的缺失、插入、替换或添加,与第一核苷酸序列相比,被认为是单个核苷酸(位置)的差异。For comparison of two or more nucleotide sequences, the percentage of "sequence identity" between a first sequence and a second sequence can be calculated by dividing [the number of nucleotides in the first sequence that are identical to the nucleotides at corresponding positions in the second sequence] by [the total number of nucleotides in the first sequence] and multiplying by [100%], wherein each deletion, insertion, substitution or addition of a nucleotide in the second nucleotide sequence is considered to be a difference of a single nucleotide (position) compared to the first nucleotide sequence.
或者,两个或更多个核苷酸序列之间的序列同一性程度可以使用如NCBI Blast v2.0的用于序列比对的已知计算机算法采用标准设置来计算。Alternatively, the degree of sequence identity between two or more nucleotide sequences can be calculated using known computer algorithms for sequence alignment such as NCBI Blast v2.0 using standard settings.
用于确定序列同一性程度的一些其他技术、计算机算法和设置例如描述于WO 04/037999、EP 0 967 284、EP 1 085 089、WO 00/55318、WO 00/78972、WO 98/49185和GB 2 357 768-A中。Some other techniques, computer algorithms and settings for determining the degree of sequence identity are described, for example, in WO 04/037999, EP 0 967 284, EP 1 085 089, WO 00/55318, WO 00/78972, WO 98/49185 and GB 2 357 768-A.
为了比较两个或更多个氨基酸序列,第一氨基酸序列和第二氨基酸序列之间的“序列同一性”百分比可以通过[第一氨基酸序列中与第二个氨基酸序列中相应位置的氨基酸残基相同的氨基酸残基数]除以[第一氨基酸序列中的氨基酸总数]乘以[100%],其中第二个氨基酸序列中每个氨基酸残基的缺失、插入、替换或添加,与第一氨基酸序列相比,被认为是单个氨基酸残基(位置)的差异,即如本文所限定的“氨基酸差异”。For comparison of two or more amino acid sequences, the percentage of "sequence identity" between a first amino acid sequence and a second amino acid sequence can be calculated by dividing [the number of amino acid residues in the first amino acid sequence that are identical to the amino acid residues at corresponding positions in the second amino acid sequence] by [the total number of amino acids in the first amino acid sequence] multiplied by [100%], wherein the deletion, insertion, substitution or addition of each amino acid residue in the second amino acid sequence is considered to be a difference of a single amino acid residue (position) compared to the first amino acid sequence, i.e., an "amino acid difference" as defined herein.
或者,两个氨基酸序列之间的序列同一性程度可以使用例如上述用于确定核苷酸序列的序列同一性程度的那些已知的计算机算法同样使用标准设置来计算。Alternatively, the degree of sequence identity between two amino acid sequences can be calculated using known computer algorithms such as those described above for determining the degree of sequence identity for nucleotide sequences, again using standard settings.
通常,为了根据上文概述的计算方法确定两个氨基酸序列之间“序列同一性”的百分比,将具有最多氨基酸残基的氨基酸序列作为“第一”氨基酸序列,另一个氨基酸序列将作为“第二”氨基酸序列。Typically, to determine the percentage of "sequence identity" between two amino acid sequences according to the calculation method outlined above, the amino acid sequence with the most amino acid residues will be used as the "first" amino acid sequence and the other amino acid sequence will be used as the "second" amino acid sequence.
此外,在确定两个氨基酸序列之间的序列同一性的程度时,技术人员可以考虑所谓的“保守性”氨基酸取代,其通常可以描述为氨基酸残基被替换为具有类似化学结构的另一种氨基酸残基的氨基酸取代,其对多肽的功能、活性或其他生物学性质几乎没有影响或基本上没有影响。此类保守性氨基酸取代在本领域中是众所周知的,例如WO 04/037999,GB-A-2 357 768,WO 98/49185,WO 00/46383和WO 01/09300;并且(优选地)这些取代的类型和/或组合可以根据来自WO 04/037999以及WO 98/49185以及其中引用的进一步参考文献的相关教导来选择。Furthermore, when determining the degree of sequence identity between two amino acid sequences, the skilled person may take into account so-called "conservative" amino acid substitutions, which can generally be described as amino acid substitutions in which an amino acid residue is replaced with another amino acid residue of similar chemical structure, which has little or substantially no effect on the function, activity or other biological properties of the polypeptide. Such conservative amino acid substitutions are well known in the art, for example WO 04/037999, GB-A-2 357 768, WO 98/49185, WO 00/46383 and WO 01/09300; and (preferably) the type and/or combination of these substitutions may be selected according to the relevant teachings from WO 04/037999 and WO 98/49185 and the further references cited therein.
此类保守性取代优选地是以下组(a)到(e)中的一个氨基酸被同组中的另一个氨基酸残基取代的取代:(a)小的脂肪族、非极性或弱极性残基:Ala、Ser、Thr、Pro和Gly;(b)极性、带负电的残基及其(不带电的)酰胺:Asp、Asn、Glu和Gln;(c)极性、带正电的残基:His、Arg和Lys;(d)大的脂肪族、非极性残基:Met、Leu、He、Val和Cys;以及(e)芳香族残基:Phe、Tyr和Trp。特别优选的保守性取代如下:Ala到Gly或到Ser;Arg到Lys;Asn到Gln或到His;Asp到Glu;Cys到Ser;Gln到Asn;Glu到Asp;Gly到Ala或到Pro;His到Asn或到Gln;Ile到Leu或到Val;Leu到Ile或到Val;Lys到Arg、到Gln或到Glu;Met到Leu、到Tyr或到Ile;Phe到Met、到Leu或到Tyr;Ser到Thr;Thr到Ser;Trp到Tyr;Tyr到Trp;和/或Phe到Val、到Ile或到Leu。Such conservative substitutions are preferably substitutions in which one amino acid from the following groups (a) to (e) is replaced by another amino acid residue from the same group: (a) small aliphatic, non-polar or weakly polar residues: Ala, Ser, Thr, Pro and Gly; (b) polar, negatively charged residues and their (uncharged) amides: Asp, Asn, Glu and Gln; (c) polar, positively charged residues: His, Arg and Lys; (d) large aliphatic, non-polar residues: Met, Leu, He, Val and Cys; and (e) aromatic residues: Phe, Tyr and Trp. Particularly preferred conservative substitutions are as follows: Ala to Gly or to Ser; Arg to Lys; Asn to Gln or to His; Asp to Glu; Cys to Ser; Gln to Asn; Glu to Asp; Gly to Ala or to Pro; His to Asn or to Gln; Ile to Leu or to Val; Leu to Ile or to Val; Lys to Arg, to Gln or to Glu; Met to Leu, to Tyr or to Ile; Phe to Met, to Leu or to Tyr; Ser to Thr; Thr to Ser; Trp to Tyr; Tyr to Trp; and/or Phe to Val, to Ile or to Leu.
本发明描述的应用于多肽的任何氨基酸取代也可以基于由Schulz等人,Principles of Protein Structure,Springer-Verlag,1978开发的不同物种的同源蛋白质之间的氨基酸变异频率的分析,基于Chou和Fasman,Biochemistry 13:211,1974和Adv.Enzymol.,47:45-149,1978开发的结构形成潜能分析,以及基于Eisenberg等人,Proc.Nat.Acad Sci.USA 81:140-144,1984;Kyte&Doolittle,J Mol.Biol.157:105-132,1981,以及Goldman等人,Ann.Rev.Biophys.Chem.15:321-353,1986开发的蛋白质疏水性模式分析,这些文献通过整体引用并入本发明。Any amino acid substitutions described herein applied to polypeptides may also be based on an analysis of amino acid variation frequencies between homologous proteins from different species developed by Schulz et al., Principles of Protein Structure, Springer-Verlag, 1978, an analysis of structure-forming potential developed by Chou and Fasman, Biochemistry 13:211, 1974 and Adv. Enzymol., 47:45-149, 1978, and an analysis of protein hydrophobicity patterns developed by Eisenberg et al., Proc. Nat. Acad Sci. USA 81:140-144, 1984; Kyte & Doolittle, J Mol. Biol. 157:105-132, 1981, and Goldman et al., Ann. Rev. Biophys. Chem. 15:321-353, 1986, the disclosures of which are incorporated herein by reference in their entirety.
纳米抗体的一级、二级和三级结构的信息在本文的描述和上面引用的通常背景技术中给出。此外,为此目的,来自美洲驼(llama)的VHH结构域的晶体结构例如由Desmyter等人,Nature Structural Biology,Vol.3,9,803(1996);Spinelli等人,Natural Structural Biology(1996);Vol.3,752-757;和Decanniere等人,Structure,Vol.7,4,361(1999)给出。提供了在常规VH结构域中形成VH/VL界面的一些氨基酸残基以及这些位置上潜在的骆驼化取代的进一步信息。Information on the primary, secondary and tertiary structures of nanobodies is given in the description herein and in the general background art cited above. In addition, for this purpose, the crystal structure of the VHH domain from llama is provided, for example, by Desmyter et al., Nature Structural Biology, Vol. 3, 9, 803 (1996); Spinelli et al., Natural Structural Biology (1996); Vol. 3, 752-757; and Decanniere et al., Structure, Vol. 7, 4, 361 (1999). Further information on some amino acid residues that form the VH/VL interface in conventional VH domains and potential camelization substitutions at these positions is provided.
如果氨基酸序列和核酸序列在其全长上具有100%的序列同一性(如本文所限定),则称它们是“相同的”。Amino acid sequences and nucleic acid sequences are said to be "identical" if they have 100% sequence identity (as defined herein) over their entire length.
核酸序列或氨基酸序列被认为是“(处于)基本上分离的(形式)”,例如,与其天然生物来源和/或获得其的反应介质或培养基相比,当其已经与在所述来源或介质中通常与其结合的至少一种其他成分分离时,其他成分例如为另一种核酸、另一种蛋白质/多肽、另一种生物成分或大分子或至少一种污染物、杂质或次要成分。特别地,当核酸序列或氨基酸序列已被纯化至少2倍、特别是至少10倍、更特别至少100倍和最高达1000倍或更多时,其被认为是“基本上分离的”。“处于基本上分离的形式”的核酸序列或氨基酸序列优选地是基本上同质的,如使用合适的技术如合适的色谱技术如聚丙烯酰胺-凝胶电泳确定的。A nucleic acid sequence or an amino acid sequence is considered to be "in substantially isolated form", e.g., when it has been separated from at least one other component with which it is normally associated in said source or medium, such as another nucleic acid, another protein/polypeptide, another biological component or macromolecule or at least one contaminant, impurity or minor component, compared to its natural biological source and/or the reaction medium or culture medium from which it is obtained. In particular, a nucleic acid sequence or an amino acid sequence is considered to be "substantially isolated" when it has been purified at least 2-fold, particularly at least 10-fold, more particularly at least 100-fold and up to 1000-fold or more. A nucleic acid sequence or an amino acid sequence "in substantially isolated form" is preferably substantially homogeneous, as determined using a suitable technique, such as a suitable chromatographic technique, such as polyacrylamide-gel electrophoresis.
术语“特异性”是指特定抗原结合分子或抗原结合蛋白(例如本发明的纳米抗体或多肽)分子可以结合的不同类型的抗原或抗原决定簇的数量。抗原结合蛋白的特异性可以基于亲和力和/或亲合力来确定。亲和力由抗原与抗原结合蛋白解离的平衡常数(KD)表示,是抗原决定簇和抗原结合蛋白的抗原结合位点之间的结合强度的量度:KD值越小,抗原决定簇和抗原结合分子之间的结合强度越强(或者,亲和力也可以表示为亲和力常数(KA),其为1/KD)。亲合力是抗原结合分子(例如本发明的纳米抗体、抗体或重链抗体)与相关抗原之间结合强度的量度。亲合力涉及抗原决定簇与抗原结合分子的抗原结合位点之间的亲和力以及抗原结合分子上存在的相关结合位点的数量。通常,抗原结合蛋白(例如本发明的纳米抗体和/或重链抗体)将以10-5至10-12摩尔/升或更小的解离常数(KD)结合,优选以10-7至10-12摩尔/升或更小,更优选以10-8至10-12摩尔/升的解离常数(KD)结合,和/或以至少107M-1,优选至少108M-1,更优选至少109M-1,例如至少1012M-1的结合亲和力结合。通常认为任何大于10-4摩尔/升的KD值代表非特异性结合。优选地,本发明的B7-H3结合蛋白,特别是纳米抗体,将以小于500nM,优选小于200nM,更优选小于10nM,例如小于500pM的亲和力结合期望抗原。抗原结合蛋白与抗原或抗原决定簇的特异性结合可以通过本身已知的任何合适的方式测定,包括例如斯卡查德分析和/或竞争性结合测定,如放射免疫测定(RIA)、酶免疫测定(EIA)和三明治竞争测定和本领域中本身已知的不同变型。The term "specificity" refers to the number of different types of antigens or antigenic determinants that a particular antigen binding molecule or antigen binding protein (e.g., nanoantibodies or polypeptides of the present invention) molecule can bind to. The specificity of an antigen binding protein can be determined based on affinity and/or avidity. Avidity is represented by the equilibrium constant (KD) of the dissociation of antigen and antigen binding protein, and is a measure of the binding strength between an antigenic determinant and the antigen binding site of an antigen binding protein: the smaller the KD value, the stronger the binding strength between an antigenic determinant and an antigen binding molecule (or, affinity can also be expressed as an affinity constant (KA), which is 1/KD). Avidity is a measure of the binding strength between an antigen binding molecule (e.g., nanoantibodies of the present invention, antibodies, or heavy chain antibodies) and a related antigen. Avidity relates to the affinity between an antigenic determinant and the antigen binding site of an antigen binding molecule and the number of related binding sites present on the antigen binding molecule. Typically, antigen binding proteins (e.g., Nanobodies and/or heavy chain antibodies of the invention) will bind with a dissociation constant (KD) of 10-5 to 10-12 mol/liter or less, preferably with a dissociation constant (KD) of 10-7 to 10-12 mol/liter or less, more preferably with a dissociation constant (KD) of 10-8 to 10-12 mol/liter, and/or with a binding affinity of at least 107 M -1 , preferably at least 108 M -1 , more preferably at least 109 M- 1 , for example at least 1012 M -1 . It is generally believed that any KD value greater than 10-4 mol/liter represents non-specific binding. Preferably, the B7-H3 binding proteins of the invention, in particular Nanobodies, will bind to the desired antigen with an affinity of less than 500 nM, preferably less than 200 nM, more preferably less than 10 nM, for example less than 500 pM. Specific binding of an antigen binding protein to an antigen or antigenic determinant can be determined by any suitable means known per se, including, for example, Scatchard analysis and/or competitive binding assays, such as radioimmunoassay (RIA), enzyme immunoassay (EIA) and sandwich competition assays and different variations known per se in the art.
如本文所用的术语“免疫球蛋白单一可变结构域”是指能够在不与其他免疫球蛋白可变结构域配对的情况下特异性结合抗原表位的免疫球蛋白可变结构域。本公开的免疫球蛋白单一可变结构域的一个实例为“结构域抗体”,例如免疫球蛋白单一可变结构域VH及VL(VH结构域及VL结构域)。免疫球蛋白单一可变结构域的另一实例为如下文定义的骆驼科的“VHH结构域”(或简称为“VHH”)。The term "immunoglobulin single variable domain" as used herein refers to an immunoglobulin variable domain that is capable of specifically binding to an antigenic epitope without pairing with other immunoglobulin variable domains. An example of an immunoglobulin single variable domain of the present disclosure is a "domain antibody", such as an immunoglobulin single variable domain VH and VL (VH domain and VL domain). Another example of an immunoglobulin single variable domain is a "VHH domain" (or simply "VHH") of Camelidae as defined below.
“仅重链抗体”(即“缺乏轻链的抗体”)的重链的可变结构域(Variable domain of Heavy chain of Heavy chain-only antibodies”也称为“VHH”,亦称为单域抗体、重链单域抗体、VHH抗体片段和VHH抗体。使用术语“VHH结构域”以将所述可变结构域与存在于常规4链抗体中的重链可变结构域(其在本文中称为“VH结构域”)以及存在于常规4链抗体中的轻链可变结构域(其在本文中称为“VL结构域”)进行区分。VHH结构域特异性结合表位而无需其他抗原结合结构域(此与常规4链抗体中的VH或VL结构域相反,在该情况下表位由VL结构域与VH结构域一起识别)。VHH结构域为由单一免疫球蛋白结构域形成的小型稳定及高效的抗原识别单元。The variable domain of the heavy chain of a “heavy chain antibody” (i.e., “antibody lacking a light chain”) is also called “VHH”, also known as a single domain antibody, a heavy chain single domain antibody, a VHH antibody fragment, and a VHH antibody. The term “VHH domain” is used to distinguish the variable domain from the heavy chain variable domain present in conventional 4-chain antibodies (which is referred to herein as a “VH domain”) and the light chain variable domain present in conventional 4-chain antibodies (which is referred to herein as a “VL domain”). The VHH domain specifically binds to an epitope without the need for other antigen-binding domains (this is in contrast to the VH or VL domains in conventional 4-chain antibodies, in which case the epitope is recognized by the VL domain together with the VH domain). The VHH domain is a small, stable, and efficient antigen recognition unit formed by a single immunoglobulin domain.
在本公开的上下文中,术语“重链单域抗体”、“VHH结构域”、“VHH”、“VHH抗体片段”、“VHH抗体”以及“纳米抗体”可互换使用。In the context of the present disclosure, the terms "heavy chain single domain antibody", "VHH domain", "VHH", "VHH antibody fragment", "VHH antibody" and "nanobody" are used interchangeably.
如本文进一步描述的,纳米抗体的氨基酸序列和结构可以被认为(但不限于此)包含四个框架区或“FR”,在本领域和本文中分别称为“框架区1”或“FR1”;“框架区2”或“FR2”;“框架区3”或“FR3”;和“框架区4”或“FR4”;这些框架区被三个互补决定区或“CDR”中断,这些互补决定区或“CDR”在本领域中分别称为“互补决定区1”或“CDR1”;“互补决定区2”或“CDR2”;和“互补决定区3”或“CDR3”。As further described herein, the amino acid sequence and structure of Nanobodies can be considered (but not limited to) as comprising four framework regions or "FRs", referred to in the art and herein as "Framework region 1" or "FR1"; "Framework region 2" or "FR2"; "Framework region 3" or "FR3"; and "Framework region 4" or "FR4", respectively; these framework regions are interrupted by three complementarity determining regions or "CDRs", referred to in the art as "Complementarity Determining Region 1" or "CDR1"; "Complementarity Determining Region 2" or "CDR2"; and "Complementarity Determining Region 3" or "CDR3", respectively.
纳米抗体的氨基酸残基根据Kabat等人(“Sequence of protein of immunological Interest”,US Public Health Services,NIH Bethesda,MD,Publication No.91)给出的VH结构域的通用编号进行编号,如Riechmann及Muyldermans,J.Immunol.Methods 231,25-38(1999)中应用于骆驼科动物的VHH结构域(参见例如上述参考文献的图2)。在这方面,应当注意——正如本领域中对于VH结构域和对于VHH结构域所熟知的——每个CDR中的氨基酸残基的总数可以变化并且可能不对应于通过Kabat编号表示的氨基酸残基的总数。也就是说,根据Kabat编号的一个或多个位置可能不会占据于实际序列中,或者实际序列可能包含比Kabat编号允许的数量更多的氨基酸残基。这意味着,通常,根据Kabat的编号可能对应或可能不对应于实际序列中氨基酸残基的实际编号。The amino acid residues of Nanobodies are numbered according to the common numbering for VH domains given by Kabat et al. ("Sequence of protein of immunological Interest", US Public Health Services, NIH Bethesda, MD, Publication No. 91), as applied to VHH domains of camelids in Riechmann and Muyldermans, J. Immunol. Methods 231, 25-38 (1999) (see, e.g., Figure 2 of the above reference). In this regard, it should be noted that - as is well known in the art for VH domains and for VHH domains - the total number of amino acid residues in each CDR may vary and may not correspond to the total number of amino acid residues represented by the Kabat numbering. That is, one or more positions numbered according to Kabat may not be occupied in the actual sequence, or the actual sequence may contain more amino acid residues than the number allowed by Kabat numbering. This means that, in general, the numbering according to Kabat may or may not correspond to the actual numbering of amino acid residues in the actual sequence.
对VH结构域的氨基酸残基进行编号的替代方法,也可以以类似的方式应用于来自骆驼科动物的VHH结构域和纳米抗体,其为Chothia等人(Nature 342,877-883(1989)描述的方法,所谓的“AbM定义”和所谓的“CONTACT定义”。然而,在本说明书、权利要求书和附图中,除非另有说明,将遵循VHH结构域的根据IMGT的编号。Alternative methods for numbering the amino acid residues of VH domains, which can also be applied in an analogous manner to VHH domains and Nanobodies from Camelids, are the method described by Chothia et al. (Nature 342, 877-883 (1989), the so-called "AbM definition" and the so-called "CONTACT definition". However, in the present description, the claims and the drawings, the numbering of VHH domains according to IMGT will be followed unless otherwise indicated.
根据上述参考文献中使用的术语,存在于天然存在的重链抗体中的可变结构域也将被称为“VHH结构域”,以将其与存在于常规4链抗体中的重链可变结构域(下文将称为“VH结构域”)和存在于常规4链抗体中的轻链可变结构域(下文将称为“VL结构域”)区分开来。According to the terminology used in the above references, the variable domain present in naturally occurring heavy chain antibodies will also be referred to as a “ VHH domain” to distinguish it from the heavy chain variable domain present in conventional 4-chain antibodies (hereinafter referred to as a “ VH domain”) and the light chain variable domain present in conventional 4-chain antibodies (hereinafter referred to as a “ VL domain”).
如上文提及的现有技术中所述,VHH结构域具有许多独特的结构特征和功能特性,这些结构特征和功能特性使得分离的VHH结构域(以及基于VHH结构域的与天然存在的VHH结构域共享这些结构特征和功能特性的纳米抗体)和含有分离的VHH结构域的蛋白质非常有利于用作功能性抗原结合结构域或蛋白质。特别地,但不限于此,VHH结构域(其本质上已经被“设计”以在不存在轻链可变结构域且不与轻链可变结构域发生任何相互作用的情况下与抗原功能性结合)和纳米抗体可以作为单一的、相对较小的、功能性抗原结合结构单元、结构域或蛋白质。这将VHH结构域与常规4链抗体的VH和VL结构域区分开来,后者本身通常不适合作为单一抗原结合蛋白或结构域实际应用,而是需要以某种形式组合以提供功能性抗原结合单元(例如在如Fab片段的常规抗体片段中;在由与VL结构域共价连接的VH结构域组成的ScFv片段中)。As described in the prior art mentioned above, VHH domains have many unique structural features and functional properties, which make isolated VHH domains (and Nanobodies based on VHH domains that share these structural features and functional properties with naturally occurring VHH domains) and proteins containing isolated VHH domains very advantageous for use as functional antigen-binding domains or proteins. In particular, but not limited to, VHH domains (which have essentially been "designed" to functionally bind to antigens in the absence of light chain variable domains and without any interaction with light chain variable domains) and Nanobodies can be used as single, relatively small, functional antigen-binding structural units, domains or proteins. This distinguishes VHH domains from the VH and VL domains of conventional 4-chain antibodies, which themselves are generally not suitable for practical use as single antigen-binding proteins or domains, but need to be combined in some form to provide functional antigen-binding units (e.g., in conventional antibody fragments such as Fab fragments; in ScFv fragments consisting of VH domains covalently linked to VL domains).
由于这些独特的特性,使用VHH结构域和纳米抗体作为单一抗原结合蛋白或抗原结合结构域(即作为较大蛋白质或多肽的一部分)与使用常规VH和VL结构域、ScFv或常规抗体片段(例如Fab或F(ab’)2片段)相比提供了许多显著优势:仅需要单个结构域以高亲和力和高选择性结合抗原,因此不需要存在两个单独的结构域,也不需要确保这两个结构域以正确的空间构象和构型存在(即通过使用专门设计的如ScFv中的接头)。Due to these unique properties, the use of VHH domains and Nanobodies as single antigen-binding proteins or antigen-binding domains (i.e. as part of a larger protein or polypeptide) offers a number of significant advantages over the use of conventional VH and VL domains, ScFv or conventional antibody fragments (e.g. Fab or F(ab')2 fragments): only a single domain is required to bind antigen with high affinity and selectivity, so there is no need for the presence of two separate domains, nor is there a need to ensure that the two domains are present in the correct spatial conformation and configuration (i.e. by using a specifically designed linker as in ScFv).
VHH结构域和纳米抗体可以由单个基因表达,不需要翻译后折叠或修饰。 VHH domains and nanobodies can be expressed from a single gene without the need for post-translational folding or modification.
VHH结构域和纳米抗体可以很容易地改造为多价和多特异性形式。 VHH domains and Nanobodies can be easily engineered into multivalent and multispecific formats.
VHH结构域和纳米抗体是高度可溶的并且不具有聚集的趋势(如Ward等人,Nature,Vol.341,1989,p.544中描述的“小鼠衍生的抗原结合结构域”)。 VHH domains and Nanobodies are highly soluble and have no tendency to aggregate (as described in "Mouse-derived antigen-binding domains" by Ward et al., Nature, Vol. 341, 1989, p. 544).
VHH结构域和纳米抗体对热、pH、蛋白酶和其他变性剂或条件高度稳定(参见例如Ewert等人,同上)。 VHH domains and Nanobodies are highly stable to heat, pH, proteases and other denaturing agents or conditions (see, e.g., Ewert et al., supra).
VHH结构域和纳米抗体即使在生产预期的规模上也易于相对便宜的制备。例如,VHH结构域、纳米抗体和包含它们的蛋白质/多肽可以使用微生物发酵产生并且不需要使用如例如常规抗体片段所使用的哺乳动物表达系统。 VHH domains and nanobodies are easy and relatively cheap to prepare even on the scale expected for production. For example, VHH domains, nanobodies and proteins/polypeptides comprising them can be produced using microbial fermentation and do not require the use of mammalian expression systems such as those used for conventional antibody fragments.
与传统的4链抗体及其抗原结合片段相比,VHH结构域和纳米抗体相对较小(约15kDa,或比传统IgG小10倍),因此比此类常规的4链抗体及其抗原结合片段显示出更高的组织(包括但不限于实体瘤和其他致密组织)渗透性。Compared to traditional 4-chain antibodies and antigen-binding fragments thereof, VHH domains and nanobodies are relatively small (about 15 kDa, or 10 times smaller than traditional IgG) and therefore exhibit higher tissue (including but not limited to solid tumors and other dense tissues) penetration than such conventional 4-chain antibodies and antigen-binding fragments thereof.
VHH结构域和纳米抗体可以显示出所谓的空腔结合特性(尤其是由于其与常规VH结构域相比扩展的CDR3环),因此还可以进入常规4链抗体和抗原结合片段无法进入的靶标和表位。 VHH domains and Nanobodies can display so-called cavity binding properties (particularly due to their extended CDR3 loop compared to conventional VH domains) and can therefore also access targets and epitopes that are inaccessible to conventional 4-chain antibodies and antigen-binding fragments.
如上所述,本发明总体上涉及针对B7-H3的纳米抗体,以及包含一种或多种此类纳米抗体的多肽(例如抗体或重链抗体或其抗原结合片段),其可用于本文所述的预防、治疗和/或诊断目的。As described above, the present invention generally relates to Nanobodies against B7-H3, as well as polypeptides (eg, antibodies or heavy chain antibodies or antigen-binding fragments thereof) comprising one or more such Nanobodies, which can be used for the prophylactic, therapeutic and/or diagnostic purposes described herein.
还如本文进一步描述的,本发明还涉及编码此类纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段的核酸、制备此类纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段的方法、表达或能够表达此类纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段的宿主细胞、包含此类纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段、核酸或宿主细胞的组合物、以及此类纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段、核酸、宿主细胞或组合物的用途。As also further described herein, the present invention also relates to nucleic acids encoding such Nanobodies, B7-H3 binding proteins or heavy chain antibodies or antigen-binding fragments thereof, methods for preparing such Nanobodies, B7-H3 binding proteins or heavy chain antibodies or antigen-binding fragments thereof, host cells expressing or capable of expressing such Nanobodies, B7-H3 binding proteins or heavy chain antibodies or antigen-binding fragments thereof, compositions comprising such Nanobodies, B7-H3 binding proteins or heavy chain antibodies or antigen-binding fragments thereof, nucleic acids or host cells, and uses of such Nanobodies, B7-H3 binding proteins or heavy chain antibodies or antigen-binding fragments thereof, nucleic acids, host cells or compositions.
通常,应当注意,如本文所用的术语纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段具有其最广泛的含义而不限于特定的生物来源或特定的制备方法。In general, it should be noted that the term Nanobody, B7-H3 binding protein or heavy chain antibody or antigen-binding fragment thereof as used herein has its broadest meaning without being limited to a specific biological source or a specific method of preparation.
本发明的人源化纳米抗体可以如本文所限定,但前提是与天然存在的VHH结构域的相应框架区相比,其在至少一个框架区中具有至少“一个氨基酸差异”(如本文所限定)。更具体地,根据本发明的一个非限制性方面,纳米抗体可以如本文所限定,但前提是与天然存在的VHH结构域的相应框架区相比,其在至少一个标志残基具有至少“一个氨基酸差异”(如本文所限定)。通常,纳米抗体在FR2和/或FR4中的至少一个中,特别是FR2和/或FR4中的至少一个标志残基处,与天然存在的VHH结构域具有至少一个此类氨基酸差异。The humanized Nanobodies of the invention may be as defined herein, with the proviso that they have at least "one amino acid difference" (as defined herein) in at least one framework region compared to the corresponding framework region of a naturally occurring VHH domain. More specifically, according to one non-limiting aspect of the invention, a Nanobody may be as defined herein, with the proviso that they have at least "one amino acid difference" (as defined herein) in at least one Hallmark residue compared to the corresponding framework region of a naturally occurring VHH domain. Typically, a Nanobody has at least one such amino acid difference with a naturally occurring VHH domain in at least one of FR2 and/or FR4, in particular at at least one Hallmark residue in FR2 and/or FR4.
重链抗体或HCAb仅由两条重链组成,其中每条重链仅包含重链可变区(VHH)以及铰链区、CH2和CH3。重链抗体或HCAb的抗原抗体结合区由三个互补决定区组成,这也使得它比一般抗体具有更好的抗原结合能力。另一方面,除了缺少轻链外,与普通抗体相比,它的重链可变区与铰链区之间没有CH1区,这也是重链抗体的一大不同。Heavy chain antibodies or HCAbs consist of only two heavy chains, each of which contains only the heavy chain variable region (VHH) as well as the hinge region, CH2 and CH3. The antigen-antibody binding region of heavy chain antibodies or HCAbs consists of three complementary determining regions, which also makes it have better antigen binding ability than ordinary antibodies. On the other hand, in addition to the lack of light chains, compared with ordinary antibodies, there is no CH1 region between its heavy chain variable region and hinge region, which is also a major difference of heavy chain antibodies.
本发明的另一个实施方案是包含本公开所述的B7-H3结合蛋白的融合蛋白。在一些实施方案中,除所述B7-H3结合蛋白外,所述融合蛋白还包含另一种或多种生物活性蛋白,所述生物活性蛋白可以具有生物学、治疗、预防或诊断意义或功能的任何蛋白质,当其被施用于受试者时,介导生物活性可预防或缓解疾病、障碍或病症。Another embodiment of the present invention is a fusion protein comprising the B7-H3 binding protein described in the present disclosure. In some embodiments, in addition to the B7-H3 binding protein, the fusion protein further comprises one or more other biologically active proteins, which can be any protein with biological, therapeutic, preventive or diagnostic significance or function, and when it is administered to a subject, mediating biological activity can prevent or alleviate a disease, disorder or condition.
本发明的另一个实施方案是能够编码如上限定的纳米抗体、B7-H3结合蛋白或重链抗体的核酸。Another embodiment of the invention is a nucleic acid capable of encoding a Nanobody, a B7-H3 binding protein or a heavy chain antibody as defined above.
本发明的另一个实施方案是包含所述纳米抗体、B7-H3结合蛋白或重链抗体或其抗原结合片段、接头和小分子细胞毒性药物的抗体-药物缀合物。抗体-药物缀合物(ADC)是连接生物活性小分子药物与抗体(例如本发明的纳米抗体或抗体)的化学连接,其作为载体将小分子药物递送至靶细胞。Another embodiment of the invention is an antibody-drug conjugate comprising the nanobody, B7-H3 binding protein or heavy chain antibody or antigen binding fragment thereof, a linker and a small molecule cytotoxic drug.Antibody-drug conjugate (ADC) is a chemical connection connecting a biologically active small molecule drug to an antibody (e.g., a nanobody or antibody of the invention), which serves as a carrier to deliver the small molecule drug to target cells.
本发明的另一个实施方案是包含如上限定的纳米抗体、B7-H3结合蛋白、重链抗体、抗原结合片段、核酸、细胞和/或抗体-药物组合物的组合物。本发明的另一个实施方案是进一步包含药学上可接受的载体的如上限定的组合物。Another embodiment of the invention is a composition comprising a Nanobody, a B7-H3 binding protein, a heavy chain antibody, an antigen binding fragment, a nucleic acid, a cell and/or an antibody-drug composition as defined above. Another embodiment of the invention is a composition as defined above further comprising a pharmaceutically acceptable carrier.
本发明的另一个实施方案是如上限定的B7-H3结合蛋白、重链抗体、抗原结合片段或纳米抗体、或如上限定的核酸、或如上限定的细胞、或如上限定的抗体-药物缀合物、或如上限定的组合物,用作药物。Another embodiment of the invention is a B7-H3 binding protein, a heavy chain antibody, an antigen-binding fragment or a Nanobody as defined above, or a nucleic acid as defined above, or a cell as defined above, or an antibody-drug conjugate as defined above, or a composition as defined above, for use as a medicament.
本发明的另一个实施方案是如上限定的B7-H3结合蛋白、重链抗体、抗原结合片段或纳米抗体、或如上限定的核酸、或如上限定的细胞、或如上限定的抗体-药物缀合物、或如上限定的组合物用于治疗、预防和/或减轻B7-H3相关的疾病。Another embodiment of the present invention is a B7-H3 binding protein, a heavy chain antibody, an antigen binding fragment or a nanobody as defined above, or a nucleic acid as defined above, or a cell as defined above, or an antibody-drug conjugate as defined above, or a composition as defined above for treating, preventing and/or alleviating a B7-H3-related disease.
本发明的另一个实施方案是如上限定的B7-H3结合蛋白、重链抗体、抗原结合片段或纳米抗体、或如上限定的核酸、或如上限定的细胞、或如上限定的抗体-药物缀合物、或如上限定的组合物在制备用于治疗、预防和/或减轻B7-H3相关的疾病的药物中的用途。Another embodiment of the present invention is the use of a B7-H3 binding protein, a heavy chain antibody, an antigen binding fragment or a nanobody as defined above, or a nucleic acid as defined above, or a cell as defined above, or an antibody-drug conjugate as defined above, or a composition as defined above in the preparation of a medicament for treating, preventing and/or alleviating a B7-H3-related disease.
在一些实施方案中,所述B7-H3相关的疾病或病症是B7-H3介导的疾病或病症。在一些实施方案中,所述B7-H3介导的疾病或病症是肿瘤。在一些实施方案中,B7-H3介导的疾病或病症是实体瘤和/或血液瘤。在一些具体的实施方案中,B7-H3介导的疾病或病症是选自由以下组成的组的一种或多种肿瘤:肺癌、乳腺癌、前列腺癌、胰腺癌、结直肠癌、黑色素瘤、肝癌、卵巢癌、膀胱癌、胃癌、食道癌和肾癌、肾上腺肿瘤、艾滋病相关癌症、肺泡软部肉瘤、星形细胞肿瘤、骨癌、脑和脊髓癌、转移性脑肿瘤、B细胞癌症、癌症、颈动脉体肿瘤、软骨肉瘤、脊索瘤、皮肤良性纤维组织细胞瘤、促结缔组织增生性小圆细胞瘤、室管膜瘤、尤因氏瘤、骨外黏液样软骨肉瘤、成骨不全症、骨纤维发育不良、胆囊癌或胆管癌、妊娠滋养细胞病、生殖细胞瘤、头颈癌症,肝细胞癌、胰岛细胞瘤、卡波西肉瘤、白血病、脂肉瘤/恶性脂肪瘤、淋巴瘤、髓母细胞瘤、脑膜瘤、多发性内分泌瘤、多发性骨髓瘤、骨髓增生异常综合征、神经母细胞瘤,甲状腺乳头状癌、甲状旁腺瘤、儿童癌症、周围神经鞘肿瘤、黑色素细胞瘤、垂体肿瘤、后葡萄膜黑色素瘤、肾转移性癌症、横纹肌样瘤、横纹肌肉瘤、肉瘤、皮肤癌、软组织肉瘤、鳞状细胞癌症、胃癌、滑膜肉瘤、睾丸癌,胸腺瘤、和甲状腺转移性癌。本公开所述的能够通过本公开的B7-H3结合蛋白或纳米抗体或重链抗体治疗的癌症不限于上述具体的癌症,只要表达B7-H3的癌症均适合使用本公开的B7-H3结合蛋白或纳米抗体或重链抗体进行治疗。In some embodiments, the B7-H3-related disease or condition is a B7-H3-mediated disease or condition. In some embodiments, the B7-H3-mediated disease or condition is a tumor. In some embodiments, the B7-H3-mediated disease or condition is a solid tumor and/or a hematological tumor. In some specific embodiments, the B7-H3-mediated disease or condition is one or more tumors selected from the group consisting of lung cancer, breast cancer, prostate cancer, pancreatic cancer, colorectal cancer, melanoma, liver cancer, ovarian cancer, bladder cancer, gastric cancer, esophageal cancer and kidney cancer, adrenal tumors, AIDS-related cancers, alveolar soft part sarcoma, astrocytic tumors, bone cancer, brain and spinal cord cancer, metastatic brain tumors, B cell cancer, cancer, carotid body tumors, chondrosarcoma, chordoma, benign fibrous histiocytoma of the skin, desmoplastic small round cell tumor, ependymoma, Ewing's tumor, extraskeletal myxoid chondrosarcoma, osteogenesis imperfecta, fibroplastic dysplasia of bone, benign, gallbladder cancer or bile duct cancer, gestational trophoblastic disease, germ cell tumor, head and neck cancer, hepatocellular carcinoma, islet cell tumor, Kaposi's sarcoma, leukemia, liposarcoma/malignant lipoma, lymphoma, medulloblastoma, meningioma, multiple endocrine tumors, multiple myeloma, myelodysplastic syndrome, neuroblastoma, papillary thyroid carcinoma, parathyroid tumor, childhood cancer, peripheral nerve sheath tumor, melanocytoma, pituitary tumor, posterior uveal melanoma, renal metastatic cancer, rhabdoid tumor, rhabdomyosarcoma, sarcoma, skin cancer, soft tissue sarcoma, squamous cell cancer, gastric cancer, synovial sarcoma, testicular cancer, thymoma, and thyroid metastatic cancer. The cancers that can be treated by the B7-H3 binding protein or nanobody or heavy chain antibody of the present disclosure are not limited to the above-mentioned specific cancers, as long as the cancer expressing B7-H3 is suitable for treatment using the B7-H3 binding protein or nanobody or heavy chain antibody of the present disclosure.
本发明的另一个实施方案是如上限定的纳米抗体、B7-H3结合蛋白、重链抗体、核酸、重组细胞、缀合物、或组合物的用途,其中所述药物通过静脉内、皮下、口服、舌下、鼻腔或吸入施用。Another embodiment of the invention is the use of a Nanobody, a B7-H3 binding protein, a heavy chain antibody, a nucleic acid, a recombinant cell, a conjugate, or a composition as defined above, wherein the medicament is administered intravenously, subcutaneously, orally, sublingually, nasally or by inhalation.
本发明的另一个实施方案是预防性或治疗性治疗B7-H3相关的疾病或病症的方法,包括向患者施用有效剂量的如上限定的纳米抗体、抗体、重链抗体、融合蛋白、核酸、重组细胞、缀合物、或组合物。Another embodiment of the invention is a method for the prophylactic or therapeutic treatment of a B7-H3-associated disease or disorder, comprising administering to the patient an effective dose of a Nanobody, antibody, heavy chain antibody, fusion protein, nucleic acid, recombinant cell, conjugate, or composition as defined above.
本发明的另一个实施方案是产生如上限定的B7-H3结合蛋白或纳米抗体或重链抗体的方法,包括:Another embodiment of the invention is a method of producing a B7-H3 binding protein or a Nanobody or a heavy chain antibody as defined above, comprising:
a)在允许多肽表达的条件下培养包含能够编码如上限定的多肽的核酸的宿主细胞,以及,a) cultivating a host cell comprising a nucleic acid capable of encoding a polypeptide as defined above under conditions allowing expression of the polypeptide, and,
b)从培养物中回收产生的多肽。b) recovering the produced polypeptide from the culture.
本发明的另一个实施方案是如上限定的方法,其中所述宿主细胞是细菌、酵母或哺乳动物细胞。Another embodiment of the invention is the method as defined above, wherein said host cell is a bacterial, yeast or mammalian cell.
本发明的另一个实施方案是诊断由B7-H3介导的疾病或病症的方法,包括以下步骤:Another embodiment of the present invention is a method for diagnosing a disease or condition mediated by B7-H3, comprising the steps of:
a)使样品与如上限定的B7-H3结合蛋白、纳米抗体、重链抗体、融合蛋白、或缀合物接触,以及a) contacting the sample with a B7-H3 binding protein, Nanobody, heavy chain antibody, fusion protein, or conjugate as defined above, and
b)检测所述B7-H3结合蛋白、纳米抗体、重链抗体、融合蛋白、或缀合物与所述样品的结合,以及b) detecting the binding of the B7-H3 binding protein, Nanobody, heavy chain antibody, fusion protein, or conjugate to the sample, and
c)其中高于截断值的结合结果指示所述样品为B7-H3介导的疾病或病症。c) wherein a binding result above the cutoff value is indicative of a B7-H3 mediated disease or disorder in the sample.
在一些实施方案中,所述样品为活检样品。在一些实施方案中,所述疾病为肿瘤。在一些实施方案中,所述疾病为实体瘤和/或血液瘤。在一些具体的实施方案中,所述疾病是选自由以下组成的组的一种或多种肿瘤:肺癌、乳腺癌、前列腺癌、胰腺癌、结直肠癌、黑色素瘤、肝癌、卵巢癌、膀胱癌、胃癌、食道癌和肾癌、肾上腺肿瘤、艾滋病相关癌症、肺泡软部肉瘤、星形细胞肿瘤、骨癌、脑和脊髓癌、转移性脑肿瘤、B细胞癌症、癌症、颈动脉体肿瘤、软骨肉瘤、脊索瘤、皮肤良性纤维组织细胞瘤、促结缔组织增生性小圆细胞瘤、室管膜瘤、尤因氏瘤、骨外黏液样软骨肉瘤、成骨不全症、骨纤维发育不良、胆囊癌或胆管癌、妊娠滋养细胞病、生殖细胞瘤、头颈癌症,肝细胞癌、胰岛细胞瘤、卡波西肉瘤、白血病、脂肉瘤/恶性脂肪瘤、淋巴瘤、髓母细胞瘤、脑膜瘤、多发性内分泌瘤、多发性骨髓瘤、骨髓增生异常综合征、神经母细胞瘤,甲状腺乳头状癌、甲状旁腺瘤、儿童癌症、周围神经鞘肿瘤、黑色素细胞瘤、垂体肿瘤、后葡萄膜黑色素瘤、肾转移性癌症、横纹肌样瘤、横纹肌肉瘤、肉瘤、皮肤癌、软组织肉瘤、鳞状细胞癌症、胃癌、滑膜肉瘤、睾丸癌,胸腺瘤、和甲状腺转移性癌。In some embodiments, the sample is a biopsy sample. In some embodiments, the disease is a tumor. In some embodiments, the disease is a solid tumor and/or a blood tumor. In some specific embodiments, the disease is one or more tumors selected from the group consisting of lung cancer, breast cancer, prostate cancer, pancreatic cancer, colorectal cancer, melanoma, liver cancer, ovarian cancer, bladder cancer, gastric cancer, esophageal cancer and kidney cancer, adrenal tumors, AIDS-related cancers, alveolar soft part sarcoma, astrocytic tumors, bone cancer, brain and spinal cord cancer, metastatic brain tumors, B cell cancer, cancer, carotid body tumors, chondrosarcoma, chordoma, benign fibrous histiocytoma of the skin, desmoplastic small round cell tumor, ependymoma, Ewing's tumor, extraskeletal myxoid chondrosarcoma, osteogenesis imperfecta, fibrous dysplasia of bone, gallbladder carcinoma or bile duct cancer, gestational trophoblastic disease, germ cell tumor, head and neck cancer, hepatocellular carcinoma, islet cell tumor, Kaposi sarcoma, leukemia, liposarcoma/malignant lipoma, lymphoma, medulloblastoma, meningioma, multiple endocrine neoplasms, multiple myeloma, myelodysplastic syndrome, neuroblastoma, papillary thyroid carcinoma, parathyroid tumor, childhood cancer, peripheral nerve sheath tumor, melanocytoma, pituitary tumor, posterior uveal melanoma, metastatic renal cancer, rhabdoid tumor, rhabdomyosarcoma, sarcoma, skin cancer, soft tissue sarcoma, squamous cell cancer, gastric cancer, synovial sarcoma, testicular cancer, thymoma, and metastatic thyroid cancer.
本发明的另一个实施方案是用于诊断由B7-H3相关的疾病或病症的试剂盒。在一些实施方案中,该试剂可以用于如上限定的方法中。Another embodiment of the present invention is a kit for diagnosing a disease or disorder associated with B7-H3. In some embodiments, the reagent can be used in the method as defined above.
本发明的另一个实施方案是进一步包含一种或多种体内显像剂的如上限定的B7-H3结合蛋白、纳米抗体、重链抗体、融合蛋白。Another embodiment of the invention is a B7-H3 binding protein, Nanobody, heavy chain antibody, fusion protein as defined above further comprising one or more in vivo imaging agents.
本发明的一个实施方案涉及药物组合物,其包含至少一种本发明的B7-H3结合蛋白、纳米抗体、重链抗体、融合蛋白,以及至少一种药学上可接受的载剂、稀释剂或赋形剂。One embodiment of the present invention relates to a pharmaceutical composition comprising at least one B7-H3 binding protein, Nanobody, heavy chain antibody, fusion protein of the present invention, and at least one pharmaceutically acceptable carrier, diluent or excipient.
测量抗B7-H3的B7-H3结合蛋白、纳米抗体、重链抗体、融合蛋白与B7-H3的结合的ELISA测定是众所周知的。ELISA assays to measure the binding of B7-H3 binding proteins, Nanobodies, heavy chain antibodies, fusion proteins against B7-H3 to B7-H3 are well known.
本发明的一个方面是包含至少一种抗B7-H3重链抗体,特别是由其衍生的纳米抗体的抗B7-H3多肽。本发明的一个方面是这样的多肽可以包含其他组分。这样的其他组分可以是多肽序列,例如一种或多种抗B7-H3纳米抗体或一种或多种抗血清白蛋白纳米抗体。其他融合蛋白也在本发明的范围内,并且可以包括例如与载体多肽、信号分子、标签和酶的融合。其他组分可以包括例如放射性标记、有机染料、荧光化合物。One aspect of the invention is an anti-B7-H3 polypeptide comprising at least one anti-B7-H3 heavy chain antibody, in particular a nanobody derived therefrom. One aspect of the invention is that such a polypeptide may comprise other components. Such other components may be polypeptide sequences, such as one or more anti-B7-H3 nanobodies or one or more anti-serum albumin nanobodies. Other fusion proteins are also within the scope of the invention and may include, for example, fusions with carrier polypeptides, signaling molecules, tags, and enzymes. Other components may include, for example, radioactive labels, organic dyes, fluorescent compounds.
根据本发明的一个方面,本发明的抗B7-H3多肽可以包含至少两个相同或不相同的抗B7-H3纳米抗体序列。抗B7-H3多肽可以包含对B7-H3不具有相同的亲和力的至少两个上述序列,因此形成组合弱亲和力和高亲和力结合序列的抗B7-H3多肽。According to one aspect of the present invention, the anti-B7-H3 polypeptide of the present invention may comprise at least two identical or different anti-B7-H3 nanobody sequences. The anti-B7-H3 polypeptide may comprise at least two of the above sequences that do not have the same affinity for B7-H3, thereby forming an anti-B7-H3 polypeptide that combines weak affinity and high affinity binding sequences.
构建二价多肽的方法是本领域已知的(例如US2003/0088074),并且也描述于下文中。Methods for constructing bivalent polypeptides are known in the art (eg US 2003/0088074) and are also described below.
可以期望在效应子功能方面修饰本发明的B7-H3结合蛋白以增强其治疗功效。例如,与某些Fc结构域尤其是与人来源的Fc结构域融合的纳米抗体融合物可能是有利的。It may be desirable to modify the B7-H3 binding proteins of the invention in terms of effector function to enhance their therapeutic efficacy. For example, nanobody fusions fused to certain Fc domains, especially to Fc domains of human origin, may be advantageous.
在顺序施用中,多肽可以在施用药剂之前和/或之后施用一次或任意次数并且以各种剂量施用。顺序施用可以与同时或顺序施用结合。In sequential administration, the polypeptide may be administered once or any number of times before and/or after administration of the agent and in various doses. Sequential administration may be combined with simultaneous or sequential administration.
本发明的另一个实施方案是如本文所述的B7-H3结合蛋白,其包含一个或多个免疫球蛋白单一可变结构域,其中所述免疫球蛋白单一可变结构域中的一个或多个是人源化的。Another embodiment of the present invention is a B7-H3 binding protein as described herein, comprising one or more immunoglobulin single variable domains, wherein one or more of said immunoglobulin single variable domains are humanized.
人源化是指突变使得在人类患者中施用时潜在的免疫原性很小或不存在。根据本发明,将多肽人源化可包括以下步骤:将一个或多个非人免疫球蛋白氨基酸替换为人共有序列或人种系基因序列中存在的人对应物而不使该多肽失去其典型特征,即人源化不会显著影响所得多肽的抗原结合能力。Humanization refers to mutations that result in little or no potential immunogenicity when administered to human patients. According to the present invention, humanization of a polypeptide may include the following steps: replacing one or more non-human immunoglobulin amino acids with human counterparts present in a human consensus sequence or human germline gene sequence without causing the polypeptide to lose its typical characteristics, i.e., humanization will not significantly affect the antigen binding ability of the resulting polypeptide.
根据本发明的一个方面,人源化纳米抗体被限定为与人框架区具有至少50%同源性(例如,55%、60%、65%、70%、75%、80%、85%、90%、95%、98%、100%)的纳米抗体。According to one aspect of the invention, humanized Nanobodies are defined as Nanobodies that have at least 50% homology (e.g. 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 100%) with human framework regions.
本发明的一个实施方案涉及包含至少一种纳米抗体的多肽,其中一个或多个氨基酸残基已被取代而基本上不改变抗原结合能力。One embodiment of the invention relates to polypeptides comprising at least one Nanobody, in which one or more amino acid residues have been substituted without substantially altering the antigen binding capacity.
技术人员将认识到本发明的B7-H3结合蛋白可以被修饰,并且这样的修饰在本发明的范围内。例如,多肽可以用作药物载体,在这种情况下,其可以与治疗性活化剂融合,或者其溶解度特性可以通过与离子/双极性基团的融合而改变,或者其可以通过与合适的成像标志物融合用于成像,或者其可以包含修饰的氨基酸等。多肽也可以制备成盐。此类基本上保留与B7-H3结合的修饰在本发明的范围内。The skilled artisan will recognize that the B7-H3 binding proteins of the invention may be modified, and such modifications are within the scope of the invention. For example, the polypeptide may be used as a drug carrier, in which case it may be fused to a therapeutic activator, or its solubility properties may be altered by fusion to an ionic/bipolar group, or it may be used for imaging by fusion to a suitable imaging marker, or it may contain modified amino acids, etc. The polypeptide may also be prepared as a salt. Such modifications that substantially retain binding to B7-H3 are within the scope of the invention.
从本文的公开内容可以清楚地看出,使用如本文限定的本发明纳米抗体的天然或合成类似物、突变体、变体、等位基因、同源物和直系同源物(本文统称为“类似物”),特别是SEQ ID NO:1-20的纳米抗体的类似物也在本发明的范围内。因此,根据本发明的一个实施方案,术语“本发明的纳米抗体”在其最广义上也涵盖此类类似物。It is clear from the disclosure herein that the use of natural or synthetic analogs, mutants, variants, alleles, homologues and orthologues of the Nanobodies of the invention as defined herein (collectively referred to herein as "analogues"), in particular analogues of the Nanobodies of SEQ ID NO: 1-20, is also within the scope of the invention. Thus, according to one embodiment of the invention, the term "Nanobody of the invention" in its broadest sense also covers such analogues.
通常,与本文限定的本发明纳米抗体相比,在此类类似物中,一个或多个氨基酸残基可能已被替换、缺失和/或添加。此类取代、插入或缺失可以在一个或多个框架区和/或一个或多个CDR中进行。当在一个或多个构架区中进行此类取代、插入或缺失时,它们可以在一个或多个标志残基和/或构架残基中的一个或多个其他位置进行,但是通常较不优选标志残基的取代、插入或缺失(除非这些是如本文所述的合适的人源化取代)。Typically, in such analogs, one or more amino acid residues may have been replaced, deleted and/or added compared to the Nanobodies of the invention as defined herein. Such substitutions, insertions or deletions may be made in one or more framework regions and/or in one or more CDRs. When such substitutions, insertions or deletions are made in one or more framework regions, they may be made at one or more other positions in one or more Hallmark residues and/or framework residues, but substitutions, insertions or deletions of Hallmark residues are generally less preferred (unless these are suitable humanizing substitutions as described herein).
又一种修饰可以包括引入一个或多个可检测标签或其他产生信号的基团或部分,这取决于标记的纳米抗体的预期用途。用于附着、使用和检测纳米抗体的合适标签和技术对技术人员而言是清楚的,例如包括但不限于荧光标签(例如荧光素、异硫氰酸盐、罗丹明、藻红蛋白、藻蓝蛋白、别藻蓝蛋白、邻苯二甲醛、和荧光胺和例如152Eu或其他镧系金属的荧光金属)、磷光标签、化学发光标签或生物发光标签(例如鲁米那、异鲁米诺、热吖啶酯、咪唑、吖啶鎓盐、草酸酯、二氧杂环丁烷或GFP及其类似物)、放射性同位素(例如3H、125I、32P、35S、14C、51Cr、36Cl、57Co、58Co、59Fe、和75Se)、金属、金属螯合物或金属阳离子(例如金属阳离子,例如99mTc、123I、111In、131I、97Ru、67Cu、67Ga、和68Ga或其他特别适用于体内、体外或原位诊断和成像的金属或金属阳离子,例如157Gd、55Mn、162Dy、52Cr、和56Fe)、以及发色团和酶(如苹果酸脱氢酶、葡萄球菌核酸酶、δ-V-类固醇异构酶、酵母醇脱氢酶、α-甘油磷酸脱氢酶、磷酸丙糖异构酶、生物素过氧化物酶、辣根过氧化物酶、碱性磷酸酶、天冬酰胺酶、葡萄糖氧化酶、β-半乳糖苷酶、核糖核酸酶、脲酶、过氧化氢酶、葡萄糖-VI-磷酸脱氢酶、葡糖淀粉酶和乙酰胆碱酯酶)。其他合适的标签对技术人员而言是清楚的,例如包括可以使用NMR或ESR光谱检测的部分。Yet another modification may comprise the introduction of one or more detectable labels or other signal generating groups or moieties, depending on the intended use of the labelled Nanobody. Suitable labels and techniques for attaching, using and detecting Nanobodies will be clear to the skilled person and include, for example, but are not limited to, fluorescent labels (such as fluorescein, isothiocyanate, rhodamine, phycoerythrin, phycocyanin, allophycocyanin, o-phthalaldehyde, and fluorescamine and fluorescent metals such as 152 Eu or other lanthanide metals), phosphorescent labels, chemiluminescent labels or bioluminescent labels (such as luminal, isoluminol, thermoacridinium esters, imidazoles, acridinium salts, oxalates, dioxetanes or GFP and its analogs), radioactive isotopes (such as 3 H, 125 I, 32 P, 35 S, 14 C, 51 Cr, 36 Cl, 57 Co, 58 Co, 59 Fe, and 75 Se), metals, metal chelates or metal cations (such as metal cations such as 99m Tc, 123 I, 111 In, 131 I, 97 Ru, 67 Cu, 67 Ga, and 68 Ga or other metals or metal cations particularly suitable for in vivo, in vitro or in situ diagnosis and imaging, such as 157 Gd, 55 Mn, 162 Dy, 52 Cr, and 56 Fe), as well as chromophores and enzymes (such as malate dehydrogenase, staphylococcal nuclease, delta-V-steroid isomerase, yeast alcohol dehydrogenase, α-glycerophosphate dehydrogenase, triosephosphate isomerase, biotin peroxidase, horseradish peroxidase, alkaline phosphatase, asparaginase, glucose oxidase, β-galactosidase, ribonuclease, urease, catalase, glucose-VI-phosphate dehydrogenase, glucoamylase and acetylcholinesterase). Other suitable labels will be clear to the skilled person, for example including moieties that can be detected using NMR or ESR spectroscopy.
根据具体标签的选择,本发明的此类标记的纳米抗体和多肽可以例如用于体外、体内或原位测定(包括本身已知的免疫测定,例如ELISA、RIA、EIA和其他“三明治测定”等)以及用于体内诊断和成像目的。Depending on the choice of the specific label, such labeled Nanobodies and polypeptides of the invention can, for example, be used in in vitro, in vivo or in situ assays (including immunoassays known per se, such as ELISA, RIA, EIA and other "sandwich assays", etc.) as well as for in vivo diagnostic and imaging purposes.
如本领域技术人员将清楚的,另一种修饰可涉及引入例如螯合上述金属或金属阳离子之一的螯合基团。合适的螯合基团例如包括但不限于二亚乙基三胺五乙酸(DTPA)或乙二胺四乙酸(EDTA)。As will be clear to the skilled person, another modification may involve the introduction of a chelating group which, for example, chelates one of the above metals or metal cations. Suitable chelating groups include, for example, but are not limited to, diethylenetriaminepentaacetic acid (DTPA) or ethylenediaminetetraacetic acid (EDTA).
又一种修饰可以包括引入作为特异性结合对例如生物素-(链霉)抗生物素蛋白结合对的一部分的官能团。这样的官能团可用于将本发明的纳米抗体连接到与结合对的另一半结合的另一种蛋白质、多肽或化学化合物(即通过形成结合对)。例如,本发明的纳米抗体可以与生物素缀合,并连接至与抗生物素蛋白或链霉抗生物素蛋白缀合的另一种蛋白质、多肽、化合物或载体。例如,此类缀合的纳米抗体可以用作报告基因,例如在可检测的信号产生剂与抗生物素蛋白或链霉抗生物素蛋白缀合的诊断系统中。例如,此类结合对还可用于将本发明的纳米抗体与包括适用于药学目的的载体的载体结合。一个非限制性的实例是在Cao和Suresh,Journal of Drug Targeting,8,4,257(2000)中描述的脂质体制剂的情况。此类结合对也可用于将治疗性活化剂连接至本发明的纳米抗体。Yet another modification may include the introduction of a functional group that is part of a specific binding pair, such as a biotin-(streptavidin) avidin binding pair. Such a functional group can be used to connect the nanobodies of the invention to another protein, polypeptide or chemical compound that is bound to the other half of the binding pair (i.e., by forming a binding pair). For example, the nanobodies of the invention can be conjugated to biotin and connected to another protein, polypeptide, compound or carrier conjugated to avidin or streptavidin. For example, such conjugated nanobodies can be used as reporter genes, such as in a diagnostic system in which a detectable signal-generating agent is conjugated to avidin or streptavidin. For example, such binding pairs can also be used to bind the nanobodies of the invention to a carrier including a carrier suitable for pharmaceutical purposes. A non-limiting example is the case of liposome preparations described in Cao and Suresh, Journal of Drug Targeting, 8, 4, 257 (2000). Such binding pairs can also be used to connect therapeutic activators to the nanobodies of the invention.
其他潜在的化学和酶修饰对技术人员而言是清楚的。也可以出于研究目的(例如,研究功能-活性关系)引入此类修饰。参考例如Lundblad和Bradshaw,Biotechnol.Appl.Biochem.,26,143-151(1997)。Other potential chemical and enzymatic modifications will be clear to the skilled person. Such modifications may also be introduced for research purposes (e.g., to study function-activity relationships). See, for example, Lundblad and Bradshaw, Biotechnol. Appl. Biochem., 26, 143-151 (1997).
如上所述,本发明还涉及基本上由至少一种本发明的纳米抗体组成的蛋白质或多肽。“基本上由...组成”是指本发明多肽的氨基酸序列与本发明纳米抗体的氨基酸序列完全相同或与具有有限数量的氨基酸残基的本发明纳米抗体的氨基酸序列对应,有限数量的氨基酸残基例如为1-20个氨基酸残基,例如1-10个氨基酸残基,优选1-6个氨基酸残基,例如1、2、3、4、5或6个氨基酸残基,添加至纳米抗体的氨基酸序列的氨基末端、羧基末端或氨基末端和羧基末端。As mentioned above, the invention also relates to proteins or polypeptides that essentially consist of at least one Nanobody of the invention. "Essentially consisting of" means that the amino acid sequence of the polypeptide of the invention is identical to the amino acid sequence of a Nanobody of the invention or corresponds to the amino acid sequence of a Nanobody of the invention with a limited number of amino acid residues, such as 1-20 amino acid residues, such as 1-10 amino acid residues, preferably 1-6 amino acid residues, such as 1, 2, 3, 4, 5 or 6 amino acid residues, added to the amino-terminus, the carboxyl-terminus or both the amino-terminus and the carboxyl-terminus of the amino acid sequence of the Nanobody.
所述氨基酸残基可能会或可能不会改变、变更或以其他方式影响纳米抗体的(生物)性质,并且可能会或可能不会为纳米抗体添加进一步的功能性。Said amino acid residues may or may not change, alter or otherwise affect the (biological) properties of the Nanobody, and may or may not add further functionality to the Nanobody.
根据另一个实施方案,本发明的多肽包含本发明的纳米抗体,该纳米抗体在其氨基末端、在其羧基末端、或在其氨基末端和在其羧基末端融合至少一个另外的氨基酸序列,即以提供包含本发明的所述纳米抗体和一个或多个另外的氨基酸序列的融合蛋白。这种融合在本文中也将被称为“纳米抗体融合”。According to another embodiment, the polypeptide of the invention comprises a Nanobody of the invention, which is fused at its amino terminus, at its carboxyl terminus, or at its amino terminus and at its carboxyl terminus to at least one further amino acid sequence, i.e. to provide a fusion protein comprising said Nanobody of the invention and one or more further amino acid sequences. Such fusions will also be referred to herein as "Nanobody fusions".
一个或多个另外的氨基酸序列可以是任何合适的和/或期望的氨基酸序列。另外的氨基酸序列可能会或可能不会改变、变更或以其他方式影响纳米抗体的(生物)性质,并且可能会或可能不会为本发明的纳米抗体或多肽添加进一步的功能性。优选地,另外的氨基酸序列使得其赋予本发明的纳米抗体或多肽一种或多种期望的特性或功能性。The one or more additional amino acid sequences may be any suitable and/or desired amino acid sequences. The additional amino acid sequences may or may not change, alter or otherwise affect the (biological) properties of the Nanobody, and may or may not add further functionality to the Nanobody or polypeptide of the invention. Preferably, the additional amino acid sequence is such that it confers one or more desired properties or functionalities to the Nanobody or polypeptide of the invention.
本发明的核酸可以是单链或双链DNA或RNA的形式,优选地是双链DNA的形式。例如,本发明的核苷酸序列可以是基因组DNA、cDNA或合成DNA(例如具有已特别适应在预期宿主细胞或宿主生物体中表达的密码子使用的DNA)。The nucleic acid of the present invention can be in the form of single-stranded or double-stranded DNA or RNA, preferably in the form of double-stranded DNA. For example, the nucleotide sequence of the present invention can be genomic DNA, cDNA or synthetic DNA (e.g., DNA with codon usage that has been specifically adapted for expression in the intended host cell or host organism).
根据本发明的一个实施方案,本发明的核酸处于如本文所限定的基本上分离的形式。According to one embodiment of the invention, the nucleic acid of the invention is in essentially isolated form as defined herein.
本发明的核酸也可以是载体的形式、存在于载体中和/或作为载体的一部分,载体例如为质粒、粘粒或YAC,其也可以是基本上分离的形式。The nucleic acid of the invention may also be in the form of, present in and/or be part of a vector, such as a plasmid, cosmid or YAC, which may also be in essentially isolated form.
本发明的核酸也可以是遗传构建体的形式、存在于遗传构建体中和/或作为遗传构建体的一部分,这对本领域技术人员而言是清楚的。此类遗传构建体通常包含至少一种本发明的核酸,该核酸任选地连接至本身已知的遗传构建体的一种或多种元件,例如一种或多种合适的调节元件(例如合适的启动子、增强子、终止子等)和本文提及的遗传构建体的其他元件。此类包含至少一种本发明核酸的遗传构建体在本文中也将被称为“本发明的遗传构建体”。Nucleic acid of the present invention can also be the form of genetic construct, be present in genetic construct and/or as a part of genetic construct, which is clear to those skilled in the art.This type of genetic construct usually comprises at least one nucleic acid of the present invention, and this nucleic acid is optionally connected to one or more elements of genetic construct known per se, for example one or more suitable regulatory elements (for example suitable promoter, enhancer, terminator etc.) and other elements of genetic construct mentioned herein.This type of genetic construct comprising at least one nucleic acid of the present invention will also be referred to as " genetic construct of the present invention " in this article.
本发明的遗传构建体可以是DNA或RNA,并且优选地是双链DNA。本发明的遗传构建体还可以是适于转化期望宿主细胞或宿主生物体的形式,适于整合到期望宿主细胞的基因组DNA中的形式,或适于在期望的宿主生物体中独立复制、维持和遗传的形式。例如,本发明的遗传构建体可以是例如质粒、粘粒、YAC、病毒载体或转座子的载体的形式。特别地,载体可以是表达载体,即可以提供体外和/或体内表达(例如在合适的宿主细胞、宿主生物体和/或表达系统中)的载体。Genetic construct of the present invention can be DNA or RNA, and is preferably double-stranded DNA.Genetic construct of the present invention can also be the form suitable for transforming desired host cell or host organism, the form suitable for being integrated into the genomic DNA of desired host cell, or the form suitable for independently replicating, maintaining and hereditary in desired host organism.For example, genetic construct of the present invention can be the form of the carrier of for example plasmid, cosmid, YAC, viral vector or transposon.Especially, carrier can be expression vector, i.e. can provide the carrier of external and/or internal expression (for example in suitable host cell, host organism and/or expression system).
在优选但非限制性的实施方案中,本发明的遗传构建体包含:a)至少一种本发明的核酸,其可操作地连接到b)一个或多个调节元件,例如启动子和任选地合适的终止子;以及任选的c)本身已知的遗传构建体的一个或多个其他元件;其中术语“调节元件”、“启动子”、“终止子”和“可操作地连接”具有其在本领域中的通常含义(如本文进一步描述的);并且其中存在于遗传构建体中的所述“其他元件”可以是例如3’-UTR或5’-UTR序列、前导序列、选择标志物、表达标志物/报告基因、和/或可以促进或增加转化或整合(效率)的元件。用于此类遗传构建体的这些和其他合适的元件对于技术人员而言是清楚的,并且可以例如取决于所使用的构建体的类型、期望的宿主细胞或宿主生物体;表达本发明的目的核苷酸序列的方式(例如,通过组成型、瞬时或诱导型表达);和/或待使用的转化技术。例如,本身已知的用于表达和产生抗体和抗体片段(包括但不限于(单)域抗体和ScFv片段)的调节序列、启动子和终止子可以以基本类似的方式使用。In a preferred, but non-limiting embodiment, the genetic construct of the invention comprises: a) at least one nucleic acid of the invention, operably linked to b) one or more regulatory elements, such as a promoter and optionally a suitable terminator; and optionally c) one or more other elements of a genetic construct known per se; wherein the terms "regulatory element", "promoter", "terminator" and "operably linked" have their usual meaning in the art (as further described herein); and wherein the "other elements" present in the genetic construct may be, for example, 3'-UTR or 5'-UTR sequences, leader sequences, selection markers, expression markers/reporter genes, and/or elements that may facilitate or increase transformation or integration (efficiency). These and other suitable elements for such genetic constructs are clear to the skilled person and may, for example, depend on the type of construct used, the desired host cell or host organism; the manner in which the nucleotide sequence of interest of the invention is expressed (e.g., by constitutive, transient or inducible expression); and/or the transformation technique to be used. For example, regulatory sequences, promoters and terminators known per se for the expression and production of antibodies and antibody fragments (including but not limited to (single) domain antibodies and ScFv fragments) may be used in an essentially analogous manner.
优选地,在本发明的遗传构建体中,所述至少一种本发明核酸和所述调节元件,以及任选的所述一种或多种其他元件,彼此“可操作地连接”,这通常意味着其相互之间存在功能关系。例如,如果所述启动子能够启动或以其他方式控制/调节编码序列的转录和/或表达(其中所述编码序列应理解为“在所述启动子的控制下”),启动子被认为是“可操作地连接”至编码序列。通常,当两个核苷酸序列可操作地连接时,其将处于相同的方向并且通常也在相同的阅读框中。其通常也是基本上连续的,尽管这可能不是必需的。Preferably, in the genetic construct of the present invention, the at least one nucleic acid of the present invention and the regulatory element, and optionally the one or more other elements, are "operably connected" to each other, which generally means that there is a functional relationship between them. For example, if the promoter is capable of initiating or otherwise controlling/regulating the transcription and/or expression of a coding sequence (wherein the coding sequence is understood to be "under the control of the promoter"), the promoter is considered to be "operably connected" to the coding sequence. Generally, when two nucleotide sequences are operably connected, they will be in the same orientation and generally in the same reading frame. It is also generally substantially continuous, although this may not be necessary.
优选地,本发明的遗传构建体的调节元件和其他元件使得其能够在期望的宿主细胞或宿主生物体中提供其期望的生物学功能。Preferably, the regulatory elements and other elements of the genetic construct of the invention are such that it is able to provide its desired biological function in the desired host cell or host organism.
例如,启动子、增强子或终止子在期望的宿主细胞或宿主生物体中应该是“可操作的”,这意味着(例如)所述启动子应该能够启动或以其他方式控制/调节与其可操作地连接(如本文所限定)的核苷酸序列如编码序列的转录和/或表达。For example, a promoter, enhancer or terminator should be "operable" in the desired host cell or host organism, which means that (for example) the promoter should be able to initiate or otherwise control/regulate the transcription and/or expression of a nucleotide sequence, such as a coding sequence, to which it is operably linked (as defined herein).
一些特别优选的启动子包括但不限于本身已知的用于在本文提及的宿主细胞中表达的启动子;并且特别是用于在细菌细胞中表达的启动子,例如本文提及的那些和/或实施例中使用的那些。Some particularly preferred promoters include, but are not limited to, promoters known per se for expression in the host cells mentioned herein; and in particular promoters for expression in bacterial cells, such as those mentioned herein and/or used in the Examples.
选择标志物应该是允许——即在适当的选择条件下——已经(成功地)用本发明的核苷酸序列转化的宿主细胞和/或宿主生物体与没有被(成功)转化的宿主细胞/生物体区分开来的那些。此类标志物的一些优选但非限制性的实例是提供对抗生素(例如卡那霉素或氨苄青霉素)的抗性的基因、提供温度抗性的基因、或允许宿主细胞或宿主生物体在不存在对非转化细胞或生物体的存活至关重要的培养基中的某些因素、化合物和/或(食物)成分的情况下维持的基因。Selectable markers should be those which allow - i.e. under appropriate selection conditions - host cells and/or host organisms which have been (successfully) transformed with the nucleotide sequence of the invention to be distinguished from host cells/organisms which have not been (successfully) transformed. Some preferred, but non-limiting examples of such markers are genes which provide resistance to antibiotics (e.g. kanamycin or ampicillin), genes which provide temperature resistance, or genes which allow the host cell or host organism to be maintained in the absence of certain factors, compounds and/or (food) components in the culture medium which are essential for the survival of non-transformed cells or organisms.
前导序列应该是允许在期望的宿主细胞或宿主生物体中进行期望的翻译后修饰和/或使得其将转录的mRNA引导到细胞的期望部分或细胞器的那些。前导序列也可以允许从所述细胞分泌表达产物。因此,前导序列可以是在宿主细胞或宿主生物体中可操作的任何原序列、前序列或前原序列。在细菌细胞中的表达可以不需要前导序列。例如,本身已知用于表达和产生抗体和抗体片段(包括但不限于单结构域抗体和ScFv片段)的前导序列可以以基本类似的方式使用。The leader sequence should be one that allows the post-translational modification to be performed in the desired host cell or host organism and/or allows the mRNA to be directed to the desired part or organelle of the cell. The leader sequence can also allow the expression product to be secreted from the cell. Therefore, the leader sequence can be any prosequence, presequence or preprosequence that is operable in the host cell or host organism. Expression in bacterial cells may not require a leader sequence. For example, the leader sequence known per se for expressing and producing antibodies and antibody fragments (including but not limited to single domain antibodies and ScFv fragments) can be used in a substantially similar manner.
表达标志物或报告基因应该是允许在宿主细胞或宿主生物体中检测遗传构建体(存在于遗传构建体上的基因或核苷酸序列)的表达。表达标志物还可以任选地允许表达产物的定位,例如在细胞的特定部分或细胞器中和/或在多细胞生物体的特定细胞、组织、器官或部分中的定位。此类报告基因也可以表达为与本发明的氨基酸序列融合的蛋白质。一些优选但非限制性的实例包括例如GFP的荧光蛋白。The expression marker or reporter gene should be one that allows detection of the expression of the genetic construct (the gene or nucleotide sequence present on the genetic construct) in a host cell or host organism. The expression marker can also optionally allow localization of the expression product, such as in a specific part or organelle of a cell and/or in a specific cell, tissue, organ or part of a multicellular organism. Such reporter genes can also be expressed as proteins fused to the amino acid sequence of the present invention. Some preferred but non-limiting examples include fluorescent proteins such as GFP.
合适的启动子、终止子和其他元件的一些优选但非限制性的实例包括可用于在本文提及的宿主细胞中表达的那些;并且特别是那些适合在细菌细胞中表达的那些,例如本文提到的那些和/或以下实施例中使用的那些。对于本发明的遗传构建体中可能存在/使用的启动子、选择标志物、前导序列、表达标志物和其他元件的一些(其他)非限制性实例——例如终止子、转录和/或翻译增强子和/或整合因子——参考例如上述提到的Sambrook等人和Ausubel等人的通用手册,以及在WO 95/07463、WO 96/23810、WO 95/07463、WO 95/21191、WO 97/11094、WO 97/42320、WO 98/06737、WO 98/21355、US-A-6,207,410、US-A-5,693,492和EP 1 085 089中给出的实例。其他实例对技术人员而言将是清楚的。还参考了上文引用的通常背景技术和本文引用的进一步参考文献。Some preferred but non-limiting examples of suitable promoters, terminators and other elements include those useful for expression in the host cells mentioned herein; and in particular those suitable for expression in bacterial cells, such as those mentioned herein and/or used in the examples below. For some (other) non-limiting examples of promoters, selection markers, leader sequences, expression markers and other elements that may be present/used in the genetic constructs of the invention - such as terminators, transcription and/or translation enhancers and/or integration factors - reference is made to the general handbooks of Sambrook et al. and Ausubel et al., for example, mentioned above, and to the examples given in WO 95/07463, WO 96/23810, WO 95/07463, WO 95/21191, WO 97/11094, WO 97/42320, WO 98/06737, WO 98/21355, US-A-6,207,410, US-A-5,693,492 and EP 1 085 089. Other examples will be clear to the skilled person. Reference is also made to the general background technology cited above and to the further references cited herein.
本发明的遗传构建体通常可以通过将本发明的核苷酸序列与上述一种或多种其他元件适当地连接来提供,例如使用如上述提到的Sambrook等人和Ausubel等人的通用手册中描述的技术。The genetic constructs of the invention may generally be provided by appropriately ligating a nucleotide sequence of the invention to one or more of the other elements described above, for example using the techniques described in the general manuals of Sambrook et al. and Ausubel et al. mentioned above.
通常,本发明的遗传构建体将通过将本发明的核苷酸序列插入本身已知的合适(表达)载体中来获得。合适的表达载体的一些优选但非限制性的实例是在以下实施例中使用的那些以及本文提及的那些。Typically, the genetic construct of the invention will be obtained by inserting the nucleotide sequence of the invention into a suitable (expression) vector known per se. Some preferred, but non-limiting examples of suitable expression vectors are those used in the following examples and those mentioned herein.
本发明的核酸和/或本发明的遗传构建体可用于转化宿主细胞或宿主生物体,即用于表达和/或生产本发明的纳米抗体或多肽。合适的宿主或宿主细胞对技术人员而言将是清楚的,并且可以例如是任何合适的真菌、原核或真核细胞或细胞系或任何合适的真菌、原核或真核生物。The nucleic acids of the invention and/or the genetic constructs of the invention can be used to transform host cells or host organisms, i.e. for expression and/or production of Nanobodies or polypeptides of the invention. Suitable hosts or host cells will be clear to the skilled person, and may for example be any suitable fungal, prokaryotic or eukaryotic cell or cell line or any suitable fungal, prokaryotic or eukaryotic organism.
通常,对于本文提及的疾病和病症的预防和/或治疗,取决于待治疗的具体疾病或病症、待使用的本发明的具体纳米抗体和多肽的效力、具体施用途径和所使用的具体药物制剂或组合物,本发明的纳米抗体和多肽通常以每天每kg体重1克至0.01微克,优选每天每kg体重0.1克至0.1微克,例如每天每kg体重约1、10、100或1000微克的量,连续地(例如通过输注)作为每日单次剂量或作为一天中的多次分剂量施用。根据本文提及的因素,临床医生通常能够确定合适的日剂量。同样清楚的是在特定情况下,临床医生可能会例如基于上述因素及其专业判断选择偏离这些数量。一般而言,可以从针对相同靶标通过基本相同途径施用的可比较常规抗体或抗体片段的通常施用量中获得一些关于施用量的指导,但需要考虑到亲和力/亲合力、功效、生物分布、半衰期和技术人员熟知的类似因素的差异。In general, for the prevention and/or treatment of the diseases and disorders mentioned herein, the Nanobodies and polypeptides of the invention are typically administered in an amount of 1 gram to 0.01 microgram per kg body weight per day, preferably 0.1 gram to 0.1 microgram per kg body weight per day, for example about 1, 10, 100 or 1000 micrograms per kg body weight per day, continuously (e.g. by infusion) as a single daily dose or as multiple divided doses throughout the day, depending on the specific disease or disorder to be treated, the potency of the specific Nanobodies and polypeptides of the invention to be used, the specific route of administration and the specific pharmaceutical formulation or composition used. Based on the factors mentioned herein, the clinician will generally be able to determine a suitable daily dose. It is also clear that in specific circumstances the clinician may choose to deviate from these amounts, for example based on the above factors and their professional judgment. In general, some guidance on the amount of administration can be obtained from the usual administration amounts of comparable conventional antibodies or antibody fragments against the same target administered by essentially the same route, but differences in affinity/avidity, efficacy, biodistribution, half-life and similar factors well known to the skilled person need to be taken into account.
还应注意,当本发明的纳米抗体含有一种或多种不同于上述优选CDR序列的其他CDR序列时,这些CDR序列可以以本身已知的任何方式获得,例如从纳米抗体(优选)、来自常规抗体的VH结构域(特别是来自人抗体)、重链抗体、常规4链抗体(例如常规人4链抗体)或针对A-β的其他免疫球蛋白序列中获得。此类针对A-β的免疫球蛋白序列可以如本领域技术人员将清楚的,以任何本身已知的方式产生,即通过用A-β免疫或通过用A-β筛选合适的免疫球蛋白序列文库或任何合适的组合。任选地,随后可以是诸如随机或定点诱变的技术和/或其他本身已知的亲和力成熟技术。用于产生此类免疫球蛋白序列的合适技术对于技术人员而言是清楚的,并且例如包括由Hoogenboom,Nature Biotechnology,23,9,1105-1116(2005)综述的筛选技术。用于产生针对特定靶标的免疫球蛋白的其他技术包括例如纳米克隆技术(例如在未预先公开的美国临时专利申请60/648,922中描述的)、所谓的SLAM技术(例如在欧洲专利申请0 542 810中描述的)、使用表达人免疫球蛋白的转基因小鼠或众所周知的杂交瘤技术(参见例如Larrick等人,Biotechnology,Vol.7,1989,p.934)。所有这些技术可用于产生针对A-β的免疫球蛋白,并且此类免疫球蛋白的CDR可用于本发明的纳米抗体,即如上所述。例如,可以确定、合成和/或分离此类CDR的序列,并将其插入本发明的纳米抗体的序列中(例如,以替换相应的天然CDR),所有这些都使用如本文所述的那些的本身已知的技术,或包含此类CDR(或编码其的核酸)的本发明的纳米抗体可以再次使用本文提及的技术从头合成。It should also be noted that when the Nanobodies of the invention contain one or more other CDR sequences that are different from the preferred CDR sequences described above, these CDR sequences can be obtained in any manner known per se, for example from Nanobodies (preferred), VH domains from conventional antibodies (in particular from human antibodies), heavy chain antibodies, conventional 4-chain antibodies (e.g. conventional human 4-chain antibodies) or other immunoglobulin sequences against A-β. Such immunoglobulin sequences against A-β can be generated in any manner known per se, as will be clear to the skilled person, i.e. by immunization with A-β or by screening a library of suitable immunoglobulin sequences with A-β or any suitable combination. Optionally, this may be followed by techniques such as random or site-directed mutagenesis and/or other affinity maturation techniques known per se. Suitable techniques for generating such immunoglobulin sequences are clear to the skilled person and include, for example, the screening techniques reviewed by Hoogenboom, Nature Biotechnology, 23, 9, 1105-1116 (2005). Other techniques for producing immunoglobulins against specific targets include, for example, nanocloning technology (e.g. described in non-prepublished US provisional patent application 60/648,922), the so-called SLAM technology (e.g. described in European patent application 0 542 810), the use of transgenic mice expressing human immunoglobulins or the well-known hybridoma technology (see, for example, Larrick et al., Biotechnology, Vol. 7, 1989, p. 934). All of these techniques can be used to produce immunoglobulins against A-beta, and the CDRs of such immunoglobulins can be used in the Nanobodies of the invention, i.e. as described above. For example, the sequences of such CDRs can be determined, synthesized and/or isolated, and inserted into the sequences of the Nanobodies of the invention (e.g., to replace the corresponding natural CDRs), all using techniques known per se such as those described herein, or Nanobodies of the invention comprising such CDRs (or nucleic acids encoding them) can be synthesized de novo, again using the techniques mentioned herein.
现在将通过以下非限制性实施例和附图进一步描述本发明。The invention will now be further described by way of the following non-limiting examples and figures.
实施例1羊驼免疫库的构建Example 1 Construction of alpaca immune library
1.1羊驼免疫1.1 Alpaca Immunity
免疫所用抗原Human B7-H3-Fc(ACRO B73-H5253)、Human B7-H3-His(ACRO B73-H52E2)、Mouse B7-H3-Fc(ACRO B73-M5255)均为商购。通过皮下注射的方式进行免疫,共免疫2只羊驼NM018和NM019。NM018采用人抗原Human B7-H3-Fc和Human B7-H3-His交替免疫;NM019采用Human B7-H3-Fc和Mouse B7-H3-Fc人鼠抗原交替免疫。单次免疫剂量为500μg。初次免疫使用弗氏不完全佐剂,后续免疫使用弗氏完全佐剂。每两周免疫一次,共免疫5次。The antigens used for immunization, Human B7-H3-Fc (ACRO B73-H5253), Human B7-H3-His (ACRO B73-H52E2), and Mouse B7-H3-Fc (ACRO B73-M5255), were all purchased commercially. Immunization was performed by subcutaneous injection, and two alpacas, NM018 and NM019, were immunized in total. NM018 was immunized alternately with human antigens Human B7-H3-Fc and Human B7-H3-His; NM019 was immunized alternately with Human B7-H3-Fc and Mouse B7-H3-Fc human and mouse antigens. The single immunization dose was 500μg. Freund's incomplete adjuvant was used for the first immunization, and Freund's complete adjuvant was used for subsequent immunizations. Immunization was performed once every two weeks, for a total of 5 times.
1.2血清效价检测1.2 Serum titer detection
分别第4次和第5次免疫结束后,采血检测血清中靶向抗原Human B7-H3-Fc抗体的效价。具体检测方法如下:After the 4th and 5th immunizations, blood samples were collected to test the titer of the target antigen Human B7-H3-Fc antibody in the serum. The specific detection method is as follows:
将抗原Human B7-H3-Fc用PBS稀释至终浓度2μg/mL,取30μL稀释液加入到第一块ELISA板中,4℃包被过夜。在免疫效价测定当日用PBST润洗三遍,后用含有5%脱脂牛奶的PBSM室温封闭两小时,再用PBST润洗三遍。在另外一块板上将未经免疫接种的阴性血清和第4次或第5次免疫后血清用PBS进行稀释,首孔2000倍稀释,然后后续7个孔采用2倍梯度稀释。将稀释好的血清加到第一块ELISA板中,室温下孵育1h。PBST洗板三次后,以1:5000加入二抗Goat anti-Llama IgG(H+L)Secondary Antibody[HRP](购自NOVUS Cat.NBP1-75088),室温下孵育0.5h。孵育完成后,PBST洗板六次,加TMB(SurModics,TMBS-1000-01)显色。根据显色结果,加入2M HCl终止反应,通过酶标仪(Molecular Devices,SpecterMax 190)在OD450下读板。The antigen Human B7-H3-Fc was diluted with PBS to a final concentration of 2μg/mL, and 30μL of the dilution was added to the first ELISA plate and coated overnight at 4℃. On the day of the immunopotency assay, the plate was rinsed three times with PBST, then blocked with PBSM containing 5% skim milk at room temperature for two hours, and then rinsed three times with PBST. On another plate, the negative serum without immunization and the serum after the fourth or fifth immunization were diluted with PBS, with a 2000-fold dilution in the first well, and then a 2-fold gradient dilution was used for the subsequent 7 wells. The diluted serum was added to the first ELISA plate and incubated at room temperature for 1 hour. After washing the plate three times with PBST, the secondary antibody Goat anti-Llama IgG (H+L) Secondary Antibody [HRP] (purchased from NOVUS Cat. NBP1-75088) was added at 1:5000 and incubated at room temperature for 0.5 hours. After incubation, the plate was washed six times with PBST and TMB (SurModics, TMBS-1000-01) was added for color development. According to the color development results, 2M HCl was added to terminate the reaction and the plate was read at OD450 using a microplate reader (Molecular Devices, SpecterMax 190).
结果如表1所示,5次免疫结束后,两只羊驼血清中靶向抗原Human B7-H3-Fc的抗体效价达1:32K稀释比以上。The results are shown in Table 1. After 5 immunizations, the antibody titer of the targeting antigen Human B7-H3-Fc in the sera of the two alpacas reached a dilution ratio of 1:32K or above.
表1.B7-H3免疫羊驼血清IgG效价检测
Table 1. Detection of IgG titer in serum of B7-H3 immunized alpaca
实施例2噬菌体展示文库构建和靶向B7-H3纳米抗体筛选Example 2 Construction of phage display library and screening of nanoantibodies targeting B7-H3
采用噬菌体展示技术,将经B7-H3抗原蛋白免疫的羊驼外周血细胞PBMC的抗体基因克隆至噬菌体展示载体,构建成抗体文库,并分别用Human B7-H3-Fc,Human B7-H3-His,Mouse B7-H3-Fc作为筛选抗原对该文库进行筛选,获得了多个特异性结合B7-H3蛋白的纳米抗体。Using phage display technology, the antibody genes of alpaca peripheral blood cells (PBMC) immunized with B7-H3 antigen protein were cloned into phage display vectors to construct an antibody library. The library was screened using Human B7-H3-Fc, Human B7-H3-His, and Mouse B7-H3-Fc as screening antigens, respectively, and multiple nanoantibodies that specifically bind to B7-H3 protein were obtained.
2.1构建驼源纳米抗体的噬菌体展示文库2.1 Construction of phage display library of camel-derived nanobodies
从羊驼采血100mL分离PBMC细胞,采用氯仿法对PBMC细胞进行RNA抽提,并将其反转录成cDNA。基于VHH抗体胚系基因(germline)的情况设计简并引物,通过PCR扩增并用琼脂糖凝胶电泳回收PCR产物后获得编码VHH-CH2的DNA片段。然后通过二次PCR的方法,以编码VHH-CH2的DNA片段为模版扩增编码可变结构域(VHH)的DNA片段。然后将编码VHH的DNA片段酶切纯化后构建至噬菌体展示用载体。最后,通过电转仪将表达VHH的载体转化至感受态大肠杆菌中,取10μl涂布单克隆平板用以测序。通过稀释点板法、单克隆测序分析分别测定了抗体库的库容和验证了抗体基因的正确插入率,经测定单域抗体文库库容大小为108级,序列分析显示该抗体基因正确插入率大于80%。100 mL of blood was collected from alpacas to separate PBMC cells, and RNA was extracted from PBMC cells by chloroform method and reverse transcribed into cDNA. Degenerate primers were designed based on the situation of VHH antibody germline genes, and the DNA fragment encoding VHH-CH2 was obtained by PCR amplification and recovery of PCR products by agarose gel electrophoresis. Then, by the method of secondary PCR, the DNA fragment encoding the variable domain (VHH) was amplified using the DNA fragment encoding VHH-CH2 as a template. Then, the DNA fragment encoding VHH was digested and purified and constructed into a phage display vector. Finally, the vector expressing VHH was transformed into competent Escherichia coli by an electrotransformer, and 10 μl was taken to coat a monoclonal plate for sequencing. The storage capacity of the antibody library and the correct insertion rate of the antibody gene were determined by dilution point plate method and monoclonal sequencing analysis, respectively. The storage capacity of the single domain antibody library was determined to be 10 8 level, and sequence analysis showed that the correct insertion rate of the antibody gene was greater than 80%.
2.2抗体基因噬菌体展示文库的筛选2.2 Screening of antibody gene phage display library
采用免疫管和磁珠筛选仪进行噬菌体展示文库的筛选,用Human B7-H3-Fc,Human B7-H3-His,Mouse B7-H3-Fc交叉进行3轮筛选。Immunotubes and magnetic bead screening were used to screen the phage display library, and three rounds of screening were performed using Human B7-H3-Fc, Human B7-H3-His, and Mouse B7-H3-Fc.
2.2.1免疫管法筛选抗体基因噬菌体展示文库2.2.1 Screening of antibody gene phage display library by immunotube method
免疫管法筛选原理是将抗原蛋白Human B7-H3-Fc或Human B7-H3-His包被在具有高吸附力的免疫管表面,通过将噬菌体展示抗体文库加入免疫管中并和吸附于免疫管表面的抗原蛋白进行孵育、洗涤和洗脱的淘选过程,最终将针对抗原的特异性单克隆抗体富集下来。The principle of immunotube screening is to coat the antigen protein Human B7-H3-Fc or Human B7-H3-His on the surface of an immunotube with high adsorption capacity, and then enrich the specific monoclonal antibodies against the antigen by adding the phage display antibody library into the immunotube and incubating, washing and eluting the antigen protein adsorbed on the surface of the immunotube.
具体方法如下。在不同组的免疫管中加入1mL 300μg/mL的Human B7-H3-Fc或Human B7-H3-His,4℃包被。将噬菌体悬液与蛋白包被后的免疫管孵育,并按照免疫管筛选系统方法进行结合和清洗。之后用Trypsin洗脱噬菌体,洗脱的噬菌体溶液与对数期大肠杆菌SS320细胞充分混合后37℃静置孵育30min,涂布在2YT培养基中,并于37℃培养箱中过夜培养用于下一轮筛选。同时将洗脱后的噬菌体溶液用对数期SS320细胞10倍梯度稀释,37℃静置孵育30min,混匀后取2μL滴在平板上,37℃培养箱中过夜培养用于检测。The specific method is as follows. Add 1mL 300μg/mL Human B7-H3-Fc or Human B7-H3-His to different groups of immunotubes and coat at 4℃. Incubate the phage suspension with the protein-coated immunotubes, and combine and wash according to the immunotube screening system method. Then elute the phage with Trypsin, mix the eluted phage solution with the logarithmic phase Escherichia coli SS320 cells, incubate at 37℃ for 30min, spread on 2YT medium, and culture in a 37℃ incubator overnight for the next round of screening. At the same time, the eluted phage solution was diluted 10 times with logarithmic phase SS320 cells, incubated at 37℃ for 30min, mixed well, and 2μL was dropped on the plate, and cultured in a 37℃ incubator overnight for detection.
2.2.2磁珠法筛选抗体基因噬菌体展示文库(Kingfisher法)2.2.2 Screening of antibody gene phage display library by magnetic bead method (Kingfisher method)
将Human B7-H3-Fc和Human B7-H3-His进行生物素标记后,与Dynabeads磁珠结合,通过将结合抗原的磁珠和抗体基因噬菌体展示文库进行孵育、洗涤和洗脱的淘选过程,由此针对抗原的特异性单克隆抗体可以大量富集。Human B7-H3-Fc and Human B7-H3-His were labeled with biotin and then bound to Dynabeads magnetic beads. The antigen-bound magnetic beads and the antibody gene phage display library were incubated, washed, and eluted for panning, thereby enriching a large number of monoclonal antibodies specific for the antigen.
具体方法如下。将制备的羊驼免疫库噬菌体悬液用5%BSA稀释封闭,与Dynabeads共孵育,收集负筛孵育后的噬菌体。按照Kingfisher磁珠筛选系统方法用Human B7-H3-Fc或Human B7-H3-His对磁珠进行结合和清洗,将5% BSA与磁珠孵育。将负筛后收集的噬菌体悬液与生物素标记抗原包被且封闭后的Dynabeads孵育,并按照Kingfisher磁珠筛选系统方法进行结合和清洗,用Trypsin洗脱噬菌体,洗脱后噬菌体溶液与对数期大肠杆菌SS320细胞充分混合后37℃静置孵育30min,涂布在2YT培养基中,并于37℃培养箱中过夜培养用于下一轮筛选。同时将洗脱后的噬菌体溶液用对数期SS320细胞10倍梯度稀释,37℃静置孵育30min,混匀后取2μL滴在平板上,37℃培养箱中过夜培养用于检测。The specific method is as follows. The prepared alpaca immune library phage suspension was diluted and blocked with 5% BSA, incubated with Dynabeads, and the phages after negative screening incubation were collected. According to the Kingfisher magnetic bead screening system method, the magnetic beads were bound and washed with Human B7-H3-Fc or Human B7-H3-His, and 5% BSA was incubated with the magnetic beads. The phage suspension collected after negative screening was incubated with Dynabeads coated and blocked with biotin-labeled antigen, and bound and washed according to the Kingfisher magnetic bead screening system method, and the phages were eluted with Trypsin. After elution, the phage solution was fully mixed with the logarithmic phase Escherichia coli SS320 cells and incubated at 37°C for 30 minutes, coated in 2YT culture medium, and cultured overnight in a 37°C incubator for the next round of screening. At the same time, the eluted phage solution was diluted 10-fold with logarithmic phase SS320 cells, incubated at 37°C for 30 min, mixed and dropped 2 μL on the plate, and cultured in a 37°C incubator overnight for detection.
2.2.3单克隆的淘选2.2.3 Selection of single clones
对每轮洗脱下来的免疫管法筛选和磁珠法筛选获得的噬菌体池用5%PBSM按照5倍梯度进行稀释,并进行ELISA筛选。The phage pools obtained from each round of elution by immunotube screening and magnetic bead screening were diluted 5 times with 5% PBSM and screened by ELISA.
将2μg/mL Human B7-H3-Fc或Mouse B7-H3-Fc加入96孔板中,每孔30μL 4℃包被过夜;5% PBSM室温封闭1h;加入2.2.1和2.2.2获得的梯度稀释的VHH或Phage表达上清30μL/孔,室温1h;VHH表达上清加入1:5000稀释的二抗Anti-Flag-HRP(Sigma Cat H7425-1VL)30μL/孔,Phage表达上清加入1:20000稀释的二抗Anti-M13-HRP(SinoBiological Cat 11973-MM05T)30μL/孔,室温1h;加入TMB显色5min至20min,之后加入终止液终止反应,酶标仪OD450读取数据。Add 2μg/mL Human B7-H3-Fc or Mouse B7-H3-Fc to a 96-well plate, 30μL per well, and coat overnight at 4℃; block with 5% PBSM at room temperature for 1h; add 30μL/well of the gradient diluted VHH or Phage expression supernatant obtained in 2.2.1 and 2.2.2 and incubate at room temperature for 1h; add 30μL/well of the secondary antibody Anti-Flag-HRP (Sigma Cat H7425-1VL) diluted 1:5000 to the VHH expression supernatant, and add 30μL/well of the secondary antibody Anti-M13-HRP (SinoBiological Cat 11973-MM05T) diluted 1:20000 to the Phage expression supernatant and incubate at room temperature for 1h; add TMB for color development for 5min to 20min, then add stop solution to terminate the reaction, and read the data by OD450 on an enzyme reader.
挑取大量单克隆进行ELISA初筛,经测序分析与ELISA结合,初筛获得33个具有序列多样性的与B7-H3抗原结合的纳米抗体,选择33个序列进行ELISA亲和复检,结果见图1。A large number of monoclones were selected for ELISA screening. After sequencing analysis combined with ELISA, 33 nanoantibodies with sequence diversity that bind to the B7-H3 antigen were obtained. 33 sequences were selected for ELISA affinity retest. The results are shown in Figure 1.
最后根据亲和性以及小鼠交叉活性选取了13个单克隆用于进行全长序列(VHH与Fc融合蛋白)表达载体的构建,具体见表2。Finally, 13 monoclones were selected based on affinity and mouse cross-reactivity for the construction of full-length sequence (VHH and Fc fusion protein) expression vectors, as shown in Table 2.
表2.VHH以及VHH-Fc抗体的氨基酸序列
Table 2. Amino acid sequences of VHH and VHH-Fc antibodies
表3.根据AbM编号系统定义的VHH的CDR序列
Table 3. CDR sequences of VHHs defined according to the AbM numbering system
实施例3抗体的构建、表达和纯化Example 3 Construction, expression and purification of antibodies
将实施例2获得的13个纳米抗体构建为人IgG1亚型,即VHH-Fc的重链抗体。The 13 nanobodies obtained in Example 2 were constructed as heavy chain antibodies of human IgG1 subtype, i.e., VHH-Fc.
3.1质粒构建3.1 Plasmid construction
将编码VHH的DNA片段构建到真核表达载体质粒pcDNA3.4-IgG1上,其中该质粒通过将人IgG1 Fc片段(SEQ ID NO:69)连接到骨架pCDNA3.4(购自Invitrogen,A14697)上而得到,最终获得包含完整的VHH-Fc全长基因的蛋白表达质粒。
The VHH-encoding DNA fragment was constructed into the eukaryotic expression vector plasmid pcDNA3.4-IgG1, wherein the plasmid was obtained by connecting the human IgG1 Fc fragment (SEQ ID NO: 69) to the backbone pCDNA3.4 (purchased from Invitrogen, A14697), and finally a protein expression plasmid containing the complete VHH-Fc full-length gene was obtained.
3.2抗体的表达和纯化3.2 Antibody expression and purification
将构建的质粒转染至Expi CHO细胞(Thermo Fisher,A29133),进行瞬转表达,在转染7天后,将表达有目的蛋白的细胞培养上清于15000g高速离心10min,所得上清用Protein A(购自cytiva(GE Life))进行亲和纯化,最后将所得蛋白储存于PBS缓冲液中。The constructed plasmid was transfected into Expi CHO cells (Thermo Fisher, A29133) for transient expression. Seven days after transfection, the cell culture supernatant expressing the target protein was centrifuged at 15,000 g for 10 min. The supernatant was affinity purified using Protein A (purchased from cytiva (GE Life)), and the resulting protein was stored in PBS buffer.
实施例4抗体的理化性质鉴定Example 4 Identification of the physicochemical properties of antibodies
4.1 VHH-Fc抗体SDS-PAGE鉴定4.1 VHH-Fc antibody SDS-PAGE identification
样品准备:将1μg的VHH-Fc抗体加入4×LDS上样缓冲液(含终浓度40mM的碘代乙酰胺)中,75℃干浴加热10min,冷却到室温后12000rpm离心5min,取上清用作非还原SDS-PAGE样品;将2μg VHH-Fc抗体加入4×LDS上样缓冲液(含有终浓度为5mM的DTT)中,100℃干浴加热10min,冷却到室温后12000rpm离心5min,取上清用作还原SDS-PAGE样品。质控品IPI(伊匹木单抗,Ipilimumab),非还原条带分子量150kDa左右,纯度大于90%,还原重链条带分子量55kDa左右,轻链分子量25kDa左右,重链加轻链纯度大于90%。将样品加入预制胶中进行凝胶电泳并通过考马斯亮蓝染色,脱色后用EPSON V550彩色扫描仪扫描;用Image J按照峰面积归一法计算还原和非还原条带纯度。Sample preparation: 1 μg of VHH-Fc antibody was added to 4×LDS loading buffer (containing iodoacetamide at a final concentration of 40 mM), heated in a 75°C dry bath for 10 min, cooled to room temperature and centrifuged at 12,000 rpm for 5 min, and the supernatant was used as a non-reduced SDS-PAGE sample; 2 μg of VHH-Fc antibody was added to 4×LDS loading buffer (containing DTT at a final concentration of 5 mM), heated in a 100°C dry bath for 10 min, cooled to room temperature and centrifuged at 12,000 rpm for 5 min, and the supernatant was used as a reduced SDS-PAGE sample. The quality control product IPI (Ipilimumab) has a non-reduced band molecular weight of about 150 kDa and a purity of more than 90%, a reduced heavy chain band molecular weight of about 55 kDa, a light chain molecular weight of about 25 kDa, and a heavy chain plus light chain purity of more than 90%. The samples were added to precast gel for gel electrophoresis and stained with Coomassie Brilliant Blue. After decolorization, they were scanned with EPSON V550 color scanner. The purity of the reduced and non-reduced bands was calculated using Image J according to the peak area normalization method.
结果见表3:VHH-Fc抗体非还原胶的条带在80kD左右,还原胶条带在40kDa左右,符合预期大小,除C184-Fc外,其余抗体纯度均大于90%。The results are shown in Table 3: the band of VHH-Fc antibody in non-reducing gel is about 80 kDa, and the band of reducing gel is about 40 kDa, which is consistent with the expected size. Except for C184-Fc, the purity of other antibodies is greater than 90%.
4.2 VHH-Fc抗体的SEC-HPLC单体纯度鉴定4.2 SEC-HPLC Monomer Purity Identification of VHH-Fc Antibodies
材料准备:1.流动相配制:150mmol/L PB+NaCl,pH调至6.0;2.样品处理:将样品浓度稀释至0.5mg/mL;3.Agilent HPLC 1100色谱柱(XBridge BEH SEC 3.5μm,7.8mm×300mm,Waters)流速设为0.8mL/min,进样体积20μL,检测器波长为280nm。按照面积归一法计算样品中高分子聚合物,单体和低分子聚合物百分比,结果见表4,VHH-Fc抗体单体除C184-Fc外纯度均大于95%。Material preparation: 1. Mobile phase preparation: 150mmol/L PB+NaCl, pH adjusted to 6.0; 2. Sample treatment: dilute the sample concentration to 0.5mg/mL; 3. Agilent HPLC 1100 column (XBridge BEH SEC 3.5μm, 7.8mm×300mm, Waters) flow rate set to 0.8mL/min, injection volume 20μL, detector wavelength 280nm. According to the area normalization method, the percentage of high molecular weight polymers, monomers and low molecular weight polymers in the sample was calculated. The results are shown in Table 4. The purity of VHH-Fc antibody monomers except C184-Fc is greater than 95%.
表4.VHH-Fc抗体理化性质检测结果
Table 4. Results of physical and chemical properties test of VHH-Fc antibodies
实施例5 VHH-Fc抗体亲和力(Elisa-Binding)检测Example 5 VHH-Fc Antibody Affinity (Elisa-Binding) Detection
用1×PBS稀释抗原Human B7-H3-His,Mouse B7-H3-Fc和Cyno B7-H3-His至浓度为2μg/mL,按30μL/孔包被96孔板,4℃过夜;次日,将96孔板PBST洗涤3次后用5%脱脂牛奶封闭2h;用PBST洗涤3次后,加入1%PBSM稀释的待测抗体(伊匹木单抗(IPI)作为阴性对照;DX008-BMG-MGC(自制样品,重链的氨基酸序列如SEQ ID NO:21所示,轻链的氨基酸序列如SEQ ID NO:22所示)作为阳性对照)并孵育1h;用PBST清洗3次后加入二抗:对于Human B7-H3-His和Cyno B7-H3-His,使用Anti-human-Fc-HRP(abcam;ab97225);对于Mouse B7-H3-Fc,用Anti-VHH1+VHH2-HRP(Genescript,A01861-200,CP0001);伊匹木单抗和DX008-BMG-MGC用Anti-humanκ+λ-HRP(Millipore;AP502P;AP506P),并孵育1h;孵育完成后,PBST洗板六次,加TMB显色;根据显色结果,加入2M HCl终止反应,通过酶标仪(Molecular Devices,SpecterMax 190)在OD450下读板。Antigens Human B7-H3-His, Mouse B7-H3-Fc and Cyno B7-H3-His were diluted with 1×PBS to a concentration of 2μg/mL, and coated on 96-well plates at 30μL/well at 4°C overnight. The next day, the 96-well plates were washed 3 times with PBST and blocked with 5% skim milk for 2h. After washing 3 times with PBST, the test antibodies (ipilimumab (IPI) as a negative control and DX008-BMG-MGC (self-made sample, the amino acid sequence of the heavy chain is shown in SEQ ID NO:21, and the amino acid sequence of the light chain is shown in SEQ ID NO:22) as a positive control) diluted with 1% PBSM were added and incubated for 1h. After washing 3 times with PBST, secondary antibodies were added: for Human B7-H3-His and Cyno B7-H3-Fc, the secondary antibodies were added. o B7-H3-His, use Anti-human-Fc-HRP (abcam; ab97225); for Mouse B7-H3-Fc, use Anti-VHH1+VHH2-HRP (Genescript, A01861-200, CP0001); for ipilimumab and DX008-BMG-MGC, use Anti-human κ+λ-HRP (Millipore; AP502P; AP506P), and incubate for 1 hour; after incubation, wash the plate six times with PBST and add TMB for color development; according to the color development results, add 2M HCl to terminate the reaction, and read the plate at OD450 using a microplate reader (Molecular Devices, SpecterMax 190).
结果见图2、图3和图4。结果表明,除C184,C23,A13外,其余抗体均与Human B7-H3-His抗原有高的亲和活性。A13,A2,A3,A77,A83,B91,C357,C59和D16有人鼠交叉活性。选择9个抗体进行人猴交叉活性检测,结果显示A2,A3,A77,A83,B91,C59,C357和D16有人猴交叉活性。The results are shown in Figures 2, 3 and 4. The results showed that except for C184, C23 and A13, the remaining antibodies had high affinity activity with Human B7-H3-His antigen. A13, A2, A3, A77, A83, B91, C357, C59 and D16 had human-mouse cross-activity. Nine antibodies were selected for human-monkey cross-activity detection, and the results showed that A2, A3, A77, A83, B91, C59, C357 and D16 had human-monkey cross-activity.
DX008-BM-MGC阳性对照抗体VH(SEQ ID NO:21)
DX008-BM-MGC positive control antibody VH (SEQ ID NO: 21)
DX008-BM-MGC阳性对照抗体VL(SEQ ID NO:22)
DX008-BM-MGC positive control antibody VL (SEQ ID NO: 22)
实施例6 VHH-Fc抗体亲和力的动力学检测Example 6 Kinetic detection of VHH-Fc antibody affinity
基于GATOR的Kientics实验模式检测VHH抗体对抗原Human B7-H3-His和Mouse B7-H3-His进行亲和动力学检测。DX008-BM-MGC作为阳性对照。待测抗体在含有PBS(10mM PH7.4),0.02% Tween 20和0.2% BSA的缓冲液中稀释至30nM,后按预设程序进行,结合时间为120s,解离时间120s。抗原从2400nM连续2倍稀释到4.69nM。最后通过不同浓度抗原的结合解离数据拟合得到KD(亲和力动力学常数)、Kon(结合常数)和Koff(解离常数),Kon可写成Ka,Koff可写成Kd。The Kientics experimental mode based on GATOR detects the affinity kinetics of VHH antibodies to the antigens Human B7-H3-His and Mouse B7-H3-His. DX008-BM-MGC is used as a positive control. The antibody to be tested is diluted to 30nM in a buffer containing PBS (10mM PH7.4), 0.02% Tween 20 and 0.2% BSA, and then carried out according to the preset program, with a binding time of 120s and a dissociation time of 120s. The antigen is diluted 2 times from 2400nM to 4.69nM. Finally, KD (affinity kinetic constant), Kon (binding constant) and Koff (dissociation constant) are obtained by fitting the binding and dissociation data of different concentrations of antigens. Kon can be written as Ka and Koff can be written as Kd.
检测结果见表5和表6。结果显示,抗体A2,A77,B91,C59的亲和力高于对照抗体,抗体A3,A83,B102,C357,D16的亲和力与对照抗体相似或略低于对照抗体,其中,A2,A77,B91,C357,C59对鼠B7-H3抗原也有亲和力。The test results are shown in Tables 5 and 6. The results showed that the affinities of antibodies A2, A77, B91, and C59 were higher than those of the control antibody, and the affinities of antibodies A3, A83, B102, C357, and D16 were similar to or slightly lower than those of the control antibody, among which A2, A77, B91, C357, and C59 also had affinity for mouse B7-H3 antigen.
表5.VHH-Fc抗体与抗原Human B7-H3-His的亲和力的动力学检测结果
Table 5. Kinetic test results of affinity of VHH-Fc antibody to antigen Human B7-H3-His
表6.VHH-Fc抗体与抗原Mouse B7-H3-His的亲和力的动力学检测结果
Table 6. Kinetic test results of affinity between VHH-Fc antibody and antigen Mouse B7-H3-His
实施例7纳米抗体人源化改造Example 7 Humanized transformation of nanobodies
为降低驼源纳米抗体可能引起的免疫原性,将纳米抗体的框架区进行人源化突变并进行回复突变以获得人源化程度较高的重链抗体同时保持人源化抗体对抗原的亲和力。In order to reduce the immunogenicity that may be caused by camel-derived nanobodies, the framework region of the nanobody was humanized and reversely mutated to obtain a heavy chain antibody with a higher degree of humanization while maintaining the affinity of the humanized antibody for the antigen.
7.1纳米抗体人源化改造过程7.1 Nanobody Humanization Process
选择VHH抗体A2进行人源化改造,将抗体序列和人源抗体胚系基因数据库进行对比,找到和VHH序列同源性比较高的人源Germline,定义CDR与framework区后,根据framework区的差异位点,设计不同程度的人源化序列。A2序列经人源化后获得7个人源化抗体:VHH21至VHH27,其氨基酸序列见表7。VHH antibody A2 was selected for humanization. The antibody sequence was compared with the human antibody germline gene database to find the human germline with high homology to the VHH sequence. After defining the CDR and framework regions, humanized sequences of different degrees were designed according to the differential sites in the framework region. After humanization of the A2 sequence, 7 humanized antibodies were obtained: VHH21 to VHH27, and their amino acid sequences are shown in Table 7.
如实施例3.1所述构建人源化抗体VHH21至VHH27的表达载体。人源化VHH-Fc抗体分别包含如上所述的VHH氨基酸序列以及人IgG1的Fc片段(SEQ ID NO:69)。人源化VHH-Fc抗体的表达与纯化参见实施例3.2。人源化VHH-Fc抗体的序列见表7。The expression vectors of humanized antibodies VHH21 to VHH27 were constructed as described in Example 3.1. The humanized VHH-Fc antibodies respectively comprised the VHH amino acid sequence described above and the Fc fragment of human IgG1 (SEQ ID NO: 69). The expression and purification of the humanized VHH-Fc antibodies are described in Example 3.2. The sequences of the humanized VHH-Fc antibodies are shown in Table 7.
表7.A2 VHH的人源化VHH以及人源化VHH-Fc的序列
Table 7. Sequences of humanized VHHs and humanized VHH-Fc of A2 VHH
表8.A2 VHH的人源化VHH的CDR序列
Table 8. CDR sequences of humanized VHHs of A2 VHH
7.2人源化抗体的亲和活性检测(ELISA-Binding检测)7.2 Affinity activity test of humanized antibodies (ELISA-Binding test)
通过ELISA测定人源化VHH-Fc抗体(VHH21至VHH27)对抗原Human B7-H3-His,Mouse B7-H3-His和Cyno B7-H3-His的亲和力,并与亲本抗体A2-VHH-Fc进行比较。The affinity of humanized VHH-Fc antibodies (VHH21 to VHH27) to the antigens Human B7-H3-His, Mouse B7-H3-His and Cyno B7-H3-His was determined by ELISA and compared with the parental antibody A2-VHH-Fc.
具体方法如下:用1×PBS稀释抗原Human B7-H3-His,Mouse B7-H3 His或Cyno B7-H3-His至浓度为2μg/mL,30μL/孔包被96孔板,4℃过夜。次日,用PBST洗3次后用5%PBS-Milk封闭2h;洗板,加入梯度稀释的待测VHH-Fc抗体(VHH21至VHH27;伊匹木单抗(IPI)作为阴性对照,DX008-BMG-MGC作为阳性对照)并孵育1h;之后,用PBST洗板3次后,加入二抗Anti-human-IgG-Fc-HRP(abcam,ab97225),室温孵育60min。PBST洗板六次,加TMB显色;根据显色结果,加入2M HCl终止反应同时检测OD450。The specific method is as follows: dilute the antigen Human B7-H3-His, Mouse B7-H3 His or Cyno B7-H3-His with 1×PBS to a concentration of 2μg/mL, and coat 96-well plates with 30μL/well at 4°C overnight. The next day, wash with PBST three times and block with 5% PBS-Milk for 2h; wash the plate, add the gradient dilution of the VHH-Fc antibody to be tested (VHH21 to VHH27; Ipilimumab (IPI) as a negative control, DX008-BMG-MGC as a positive control) and incubate for 1h; then, wash the plate three times with PBST, add the secondary antibody Anti-human-IgG-Fc-HRP (abcam, ab97225), and incubate at room temperature for 60min. Wash the plate six times with PBST, add TMB for color development; according to the color development results, add 2M HCl to terminate the reaction and detect OD450 at the same time.
结果显示在图5中。结果表明,VHH21-Fc至VHH27-Fc均保持了与人和食蟹猴B7-H3抗原的亲和力,VHH21-Fc,VHH22-Fc,VHH23-Fc和VHH25-Fc保留了亲本的对小鼠抗原的结合能力。The results are shown in Figure 5. The results showed that VHH21-Fc to VHH27-Fc all maintained affinity for human and cynomolgus monkey B7-H3 antigens, and VHH21-Fc, VHH22-Fc, VHH23-Fc and VHH25-Fc retained the parent's ability to bind to mouse antigens.
实施例8人源化抗体亲和动力学评估Example 8 Humanized Antibody Affinity Kinetics Evaluation
基于GATOR的Kientics实验模式检测人源化VHH-Fc抗体对抗原Human B7-H3-His,Mouse B7-H3-His和Cyno B7-H3-His的亲和动力学,亲本抗体A2 VHH-Fc作为阳性对照,检测方法参见实施例6。The GATOR-based Kientics experimental model was used to detect the affinity kinetics of humanized VHH-Fc antibodies to the antigens Human B7-H3-His, Mouse B7-H3-His and Cyno B7-H3-His. The parent antibody A2 VHH-Fc was used as a positive control. The detection method is shown in Example 6.
检测结果见表9。结果显示,VHH21和VHH25的KD值与母本KD值相当,其它分子的KD值大于亲本A2VHH-Fc抗体的KD值。The test results are shown in Table 9. The results showed that the KD values of VHH21 and VHH25 were comparable to the parent KD value, and the KD values of the other molecules were greater than the KD value of the parent A2 VHH-Fc antibody.
表9.人源化VHH-Fc抗体与抗原Human B7-H3-His、Mouse B7-H3-His以及Cyno B7-H3-His的亲和力的动力学检测结果
注:N/A为1200nm不结合,NA为不解离。Table 9. Kinetic test results of the affinity of humanized VHH-Fc antibodies to antigens Human B7-H3-His, Mouse B7-H3-His and Cyno B7-H3-His
Note: N/A means no binding at 1200nm, NA means no dissociation.
实施例9人源化候选分子ADC体内药效实验Example 9 In vivo efficacy experiment of humanized candidate ADC molecules
通过化学偶联的方式,将由DNA拓扑异构酶I抑制剂DX8951和蛋白酶可切割接头MC-GGFG连接而成的拓扑异构酶类毒素0143(获自MCE,货号:HY-114233)偶联到本申请的人源化抗体分子VHH25-Fc上,制成VHH25-0143 ADC分子,DAR值约为4。拓扑异构酶类毒素0143的结构如下:
By chemical coupling, the topoisomerase toxin 0143 (obtained from MCE, catalog number: HY-114233), which is formed by connecting the DNA topoisomerase I inhibitor DX8951 and the protease cleavable linker MC-GGFG, is coupled to the humanized antibody molecule VHH25-Fc of the present application to prepare the VHH25-0143 ADC molecule with a DAR value of about 4. The structure of the topoisomerase toxin 0143 is as follows:
向Balb/c nude小鼠右侧背部皮下接种Calu-6细胞,建立人肺癌Calu-6细胞株皮下异种移植小鼠动物模型,待肿瘤生长至平均体积100mm3时根据肿瘤大小和小鼠体重随机分为四组:载剂对照组、VHH25-0143 ADC低剂量组(1mg/kg)、VHH25-0143 ADC中剂量组(3mg/kg)和VHH25-0143 ADC高剂量组(10mg/kg),每组5只小鼠。分组当天记为第1天,并在分组当天开始给药,每周给药一次(QW),共给药3次。给药后,每周测量两次肿瘤大小,结果如图6所示。Calu-6 cells were subcutaneously inoculated on the right back of Balb/c nude mice to establish a subcutaneous xenograft mouse model of human lung cancer Calu-6 cell line. When the tumor grew to an average volume of 100 mm3, the mice were randomly divided into four groups according to tumor size and mouse weight: vehicle control group, VHH25-0143 ADC low-dose group (1 mg/kg), VHH25-0143 ADC medium-dose group (3 mg/kg) and VHH25-0143 ADC high-dose group (10 mg/kg), with 5 mice in each group. The day of grouping was recorded as day 1, and medication was started on the day of grouping, once a week (QW), for a total of 3 times. After medication, the tumor size was measured twice a week, and the results are shown in Figure 6.
图6显示,VHH25-0143 ADC分子在三种剂量下均能抑制肿瘤生长,表明其在体内具有有效的抗肿瘤活性。Figure 6 shows that the VHH25-0143 ADC molecule can inhibit tumor growth at three doses, indicating that it has effective anti-tumor activity in vivo.
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| WO2020076970A1 (en) * | 2018-10-11 | 2020-04-16 | Inhibrx, Inc. | B7h3 single domain antibodies and therapeutic compositions thereof |
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