WO2025140497A1 - Pvrig binding protein, bispecific antibody, and use - Google Patents
Pvrig binding protein, bispecific antibody, and use Download PDFInfo
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- C07—ORGANIC CHEMISTRY
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- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
- C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
- C07K16/2803—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K39/395—Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
- A61P35/02—Antineoplastic agents specific for leukemia
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
- C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/46—Hybrid immunoglobulins
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/30—Immunoglobulins specific features characterized by aspects of specificity or valency
- C07K2317/31—Immunoglobulins specific features characterized by aspects of specificity or valency multispecific
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
- C07K2317/565—Complementarity determining region [CDR]
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
- C07K2317/569—Single domain, e.g. dAb, sdAb, VHH, VNAR or nanobody®
Definitions
- the present invention belongs to the field of biomedicine, and in particular relates to PVRIG binding protein, bispecific antibody and application thereof.
- T and NK cell co-inhibitory receptors are members of the immunoglobulin (Ig) superfamily. When they bind to the corresponding ligands expressed on antigen presenting cells or tumor cells, they weaken cell activation through protein tyrosine phosphatases (such as SHIP-1 and SHP-2), ultimately leading to reduced effector function and inhibiting gene expression.
- Receptor blockers are able to specifically recognize and bind to certain receptors, preventing their corresponding ligands from binding to them. In tumor treatment, blocking the binding of co-inhibitory receptors to their ligands through receptor blockers helps activate the activity of immune cells and improve anti-tumor efficacy.
- PVRIG is a co-inhibitory receptor belonging to the poliovirus receptor (PVR) family, also known as CD112R, which is usually expressed on natural killer cells (NK) and CD8+T cells.
- PVRIG poliovirus receptor
- Human PVRIG is a 36kD single-pass transmembrane protein that contains a transmembrane region, a long intracellular domain, and an extracellular immunoglobulin variable (IgV) domain. Since CD226 and PVRIG have the same binding site on CD112, CD226 competes with the inhibitory immune checkpoint PVRIG for binding to CD112 to promote T cell activation. Therefore, PVRIG can significantly inhibit the CD112/CD226 interaction in T cells.
- the object of the present invention is to provide a PVRIG binding protein, a bispecific antibody or an antigen-binding fragment and applications thereof.
- the present invention provides a bispecific antibody or antigen-binding fragment, comprising a first antigen-binding portion capable of binding to PVRIG; the first antigen-binding portion comprises one or more amino acid sequences of (a)-(c):
- HCDR1 which comprises the amino acid sequence shown in SEQ ID NO:6, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:6;
- HCDR2 which comprises the amino acid sequence shown in SEQ ID NO:7, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:7;
- HCDR3 which comprises the amino acid sequence shown in any one of SEQ ID NOs: 8-12, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in any one of SEQ ID NOs: 8-12.
- the first antigen binding portion comprises a heavy chain variable region (VH), wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; and HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12.
- VH heavy chain variable region
- HCDR2 which comprises the amino acid sequence shown in SEQ ID NO: 19, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 19;
- HCDR3 comprising the amino acid sequence shown in SEQ ID NO: 20, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 20;
- LCDR3 which comprises the amino acid sequence shown in SEQ ID NO:23, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:23.
- the second antigen binding portion comprises a heavy chain variable region (VH), wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; and HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20.
- VH heavy chain variable region
- the second antigen binding portion comprises a light chain variable region (VL), wherein the VL comprises LCDR1, LCDR2 and LCDR3; wherein LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; and LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
- VL light chain variable region
- the second antigen binding portion comprises VH and VL; the VH comprises HCDR1, HCDR2 and HCDR3; the VL comprises LCDR1, LCDR2 and LCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20; LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
- the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:24.
- the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:25.
- the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:24.
- the second antigen binding portion further comprises a heavy chain constant region and a light chain constant region.
- the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence set forth in SEQ ID NO: 26 or 27.
- the light chain of the antibody comprises the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:31.
- HCDR2 which comprises the amino acid sequence shown in SEQ ID NO:7, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:7;
- HCDR3 comprising an amino acid sequence as shown in any one of SEQ ID NOs: 8-12, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence as shown in any one of SEQ ID NOs: 8-12;
- the second antigen binding portion comprises one or more amino acid sequences of (d)-(i):
- HCDR1 comprising the amino acid sequence shown in SEQ ID NO: 18, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 18;
- HCDR2 which comprises the amino acid sequence shown in SEQ ID NO: 19, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 19;
- HCDR3 comprising the amino acid sequence shown in SEQ ID NO: 20, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 20;
- LCDR1 which comprises the amino acid sequence shown in SEQ ID NO:21, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:21;
- LCDR2 which comprises the amino acid sequence shown in SEQ ID NO:22, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:22;
- LCDR3 which comprises the amino acid sequence shown in SEQ ID NO:23, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:23.
- the first antigen-binding portion comprises a heavy chain variable region (VH), wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12.
- VH heavy chain variable region
- the second antigen-binding portion comprises VH and VL; wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein the VL comprises LCDR1, LCDR2 and LCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20; LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
- the first antigen binding portion comprises a heavy chain variable region (VH), the VH comprising HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12; the second antigen binding portion comprises VH and VL; the VH comprises HCDR1, HCDR2 and HCDR3; the VL comprises LCDR1, LCDR2 and LCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20; LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
- VH heavy
- the first antigen binding moiety is a single domain antibody.
- the single domain antibody comprises an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions to an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17.
- the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:24.
- the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:25.
- the first antigen binding portion is a single domain antibody comprising the amino acid sequence of any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence of any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence of any one of SEQ ID NOs: 13-17;
- the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence of SEQ ID NO: 24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence of any one of
- the light chain variable region of the second antigen binding portion comprises an amino acid sequence as shown in SEQ ID NO:25, or an amino acid sequence with at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence as shown in SEQ ID NO:25, or an amino acid sequence with at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence as shown in SEQ ID NO:25, or an amino acid sequence with one or more conservative amino acid substitutions compared to the amino acid sequence as shown in SEQ ID NO:25.
- the second antigen binding portion further comprises a heavy chain constant region and a light chain constant region.
- the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence set forth in SEQ ID NO: 26 or 27.
- the present invention provides a pharmaceutical composition, comprising the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector or the above-mentioned cell, and a pharmaceutically acceptable excipient.
- the present invention provides use of the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector, the above-mentioned cell or the above-mentioned pharmaceutical composition in the preparation of a drug for treating or preventing a disease.
- the present invention provides a method for treating or preventing a disease, comprising administering a therapeutically effective amount of the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector, the above-mentioned cell or the above-mentioned pharmaceutical composition to a patient in need thereof.
- the disease is a proliferative disease or an infection.
- the disease is a tumor.
- the tumor is a benign tumor or a cancer.
- the tumor is selected from prostate cancer, liver cancer, colorectal cancer, ovarian cancer, uterine cancer (such as endometrial cancer), breast cancer (such as triple negative breast cancer), pancreatic cancer, gastric cancer, cervical cancer, head and neck cancer, thyroid cancer, testicular cancer, bladder cancer, urothelial cancer, lung cancer (such as small cell lung cancer and non-small cell lung cancer), melanoma, non-melanoma skin cancer (such as squamous and basal cell carcinoma), glioma, kidney cancer, lymphoma (such as non-Hodgkin lymphoma, e.g., diffuse large B-cell lymphoma; Hodgkin lymphoma), leukemia (such as acute myeloid leukemia, T-cell acute lymphoblastic leukemia
- FIG1 illustrates two structures of the bispecific antibodies of the present invention
- FIG1A is the structure of the bispecific antibody Bi-VH1
- FIG1B is the structure of the bispecific antibody Bi-VH3.
- FIG5 is a graph showing the binding curve of antibody or VHH-Fc fusion protein blocking the binding of ligand PVRL2 to cell surface PVRIG.
- FIG6 shows that antibodies or VHH-Fc fusion proteins block the cellular activity of PVRL2-PVRIG interaction.
- FIG. 7 shows that antibodies or VHH-Fc fusion proteins block the cellular activity of PVRL2-PVRIG interaction.
- FIG8 shows cellular activity of antibodies blocking PVR-TIGIT interaction.
- FIG. 9 shows the activity of antibodies or fusion proteins in activating NK cells.
- a entity refers to one or more of that entity, e.g., "an antibody” should be understood as one or more antibodies, and thus, the terms “a” (or “an”), “one or more” and “at least one” can be used interchangeably herein.
- the terms “comprising” or “including” mean that the antibody, composition, method, etc. include the listed elements, such as components or steps, but do not exclude others. "Essentially consisting of” means that the antibody, composition, method, etc. exclude other elements that have a fundamental effect on the characteristics of the combination, but do not exclude elements that have no essential effect on the antibody, composition, method, etc. "Consisting of” means excluding elements not specifically listed.
- Polypeptide is intended to encompass the singular “polypeptide” as well as the plural “polypeptides”, and refers to a molecule composed of amino acid monomers linearly linked by amide bonds (also known as peptide bonds).
- Polypeptide refers to any single chain or multiple chains of two or more amino acids, and does not refer to the specific length of the product. Therefore, the definition of “polypeptide” includes peptides, dipeptides, tripeptides, oligopeptides, "proteins", “amino acid chains” or any other terms used to refer to two or more amino acid chains, and “polypeptide” can be used to replace any of the above terms, or used interchangeably with any of the above terms.
- Polypeptide is also intended to refer to products modified after the expression of the polypeptide, including but not limited to glycosylation, acetylation, phosphorylation, amidation, derivatization by known protecting/blocking groups, proteolytic cleavage or non-natural amino acid modifications.
- the polypeptide can be derived from a natural biological source or produced by recombinant technology, but it is not necessarily translated from a specified nucleic acid sequence, and it may be produced in any manner including chemical synthesis.
- the CDR region of an antibody is responsible for the binding specificity of the antibody to an antigen.
- known antibody heavy chain and light chain variable region sequences there are currently several methods for determining the CDR region of an antibody, including Kabat, IMGT, Chothia and AbM numbering systems.
- the application of the definition of the CDR of an antibody or its variant will be within the scope of the term defined and used herein. If the variable region amino acid sequence of the given antibody is given, then those skilled in the art can determine which residues are included in a specific CDR usually, without relying on any experimental data outside the sequence itself.
- Antibody refers to a polypeptide or polypeptide complex that specifically recognizes and binds to an antigen.
- An antibody can be a complete antibody and any antigen-binding fragment thereof or a single chain thereof. Therefore, “antibody” includes any protein or peptide that contains at least a portion of an immunoglobulin molecule that has biological activity of binding to an antigen.
- Antibodies and antigen-binding fragments include but are not limited to the complementarity determining region (CDR) of a heavy chain or light chain or its ligand-binding portion, a heavy chain variable region (VH), a light chain variable region (VL), a heavy chain constant region (CH), a light chain constant region (CL), a framework region (FR) or any portion thereof, or at least a portion of a binding protein.
- the CDR region includes the CDR region (LCDR1-3) of the light chain and the CDR region (HCDR1-3) of the heavy chain.
- the heavy chain constant region includes the CH1 domain, the hinge (e.g., the upper, middle and/or lower hinge region) domain, the CH2 domain, and the CH3 domain; the crystallizable segment (Fc fragment) is equivalent to the CH2 and CH3 domains.
- Antibodies and antigen-binding fragments can specifically recognize and bind to polypeptides or polypeptide complexes of one or more (such as two) antigens.
- Antibodies or antigen-binding fragments that specifically recognize and bind to multiple (such as two) antigens can be referred to as multispecific (such as bispecific) antibodies or antigen-binding fragments.
- a complete antibody includes a heavy chain and/or a light chain.
- the categories of heavy chains include gamma, mu, alpha, delta or epsilon ( ⁇ , ⁇ , ⁇ , ⁇ ), among which there are some subclasses (e.g., ⁇ 1- ⁇ 4).
- the nature of the chain determines the "type" of the antibody, which is IgG, IgM, IgA, IgD or IgE, respectively.
- Antibody subclasses such as IgG1, IgG2, IgG3, IgG4, etc., have been fully characterized and the functional specificity conferred is also known. All antibody types are within the scope of protection of the present invention.
- the antibody includes two heavy chains or and two light chains, and these four chains are connected in a "Y" configuration by disulfide bonds, wherein the light chain starts from the "Y" mouth and continues through the variable region to surround the heavy chain.
- Antibody fragment or “antigen-binding fragment” refers to a portion of an antibody, such as F(ab')2, F(ab)2, Fab', Fab, Fv, scFv, etc. Regardless of its structure, an antibody fragment binds to the same antigen recognized by the intact antibody.
- Antibody fragments include aptamers, spiegelmers, and bivalent antibodies.
- Antigen-binding fragment also includes any synthetic or genetically engineered protein that acts as an antibody by binding to a specific antigen to form a complex.
- Fab generally refers to the part of a conventional antibody (such as IgG) that binds to an antigen, including the heavy chain variable region VH, light chain variable region VL, heavy chain constant region domain CH1, and light chain constant region CL of the antibody.
- the C-terminus of VH is linked to the N-terminus of CH1 to form a heavy chain Fd fragment
- the C-terminus of VL is linked to the N-terminus of CL to form a light chain
- the C-terminus of CH1 is further linked to the hinge region and other constant region domains of the heavy chain to form a heavy chain.
- Fab also refers to a variant structure of Fab.
- non-essential amino acid residues of immunoglobulin polypeptides are preferably replaced by other amino acid residues from the same side chain family.
- a string of amino acids may be replaced by a structurally similar string of amino acids that differ in sequence and/or in the composition of the side chain family.
- the PVRIG binding proteins or bispecific antibodies provided by the present invention include modified derivatives, i.e., modified by covalent attachment of any type of molecule to the PVRIG binding protein or bispecific antibody, wherein the covalent attachment does not prevent the PVRIG binding protein or bispecific antibody from binding to the epitope.
- the PVRIG binding protein or bispecific antibody can be glycosylated, acetylated, pegylated, phosphorylated, amidated, derivatized by known protecting/blocking groups, proteolytically cleaved, linked to cellular ligands or other proteins, etc. Any of the numerous chemical modifications can be performed by existing techniques, including but not limited to specific chemical cleavage, acetylation, formylation, metabolic synthesis of tunicamycin, etc.
- the PVRIG binding protein or bispecific antibody described herein may be neutral, i.e., substantially free of net charge, such as when the pH of the composition containing the PVRIG binding protein or bispecific antibody is the isoelectric point of the protein, the protein is electrically neutral.
- the protein described herein may exist in the form of a positive ion, such as when the pH is below the isoelectric point, the protein molecule as a whole exhibits a positive charge.
- the protein described herein may exist in the form of a negative ion, such as when the pH is above the isoelectric point, the protein molecule as a whole exhibits a negative charge.
- the effective dose and treatment regimen for treating a particular patient will depend on various factors, including the specific PVRIG binding protein or bispecific antibody or derivative used, the patient's age and weight, general health, sex and diet, as well as the time of administration, frequency of excretion, drug combination, and the severity of the specific disease being treated. These factors are determined by medical care personnel, including those of ordinary skill in the art.
- the dosage used can be determined by pharmacological and pharmacokinetic principles well known in the art.
- the PVRIG binding protein or bispecific antibody of the present invention is administered to the patient at a dose of 0.01 mg/kg to 100 mg/kg of the patient's body weight each time. In some embodiments, the administration is once a week, every two weeks, every three weeks, or every four weeks.
- the antibodies provided by the present invention can be derived from any animal, such as mammals.
- the antibodies are human, mouse, donkey, rabbit, goat, camel, llama, horse or chicken antibodies.
- the variable region can be of condricthoid origin (e.g., from sharks).
- Treatment refers to therapeutic treatment and preventive or prophylactic measures, the purpose of which is to prevent, slow down, improve or stop undesirable physiological changes or disorders, such as the progression of a disease, including but not limited to the following results, whether detectable or undetectable, relief of symptoms, reduction in the extent of the disease, stabilization of the disease state (i.e., no worsening), delay or slowing of disease progression, improvement, alleviation, reduction or disappearance of the disease state (whether partial or complete), extension of the expected survival period compared to not receiving treatment, etc.
- Patients in need of treatment include patients who already have a disease or disorder, patients who are susceptible to a disease or disorder, or patients who need to prevent the disease or disorder, and patients who can or are expected to benefit from the administration of the antibodies or pharmaceutical compositions provided by the present invention for detection, diagnostic procedures and/or treatment.
- Patient refers to any mammal in need of diagnosis, prevention, prognosis or treatment, including humans, dogs, cats, rabbits, mice, horses, cows, etc.
- Antibodies or fusion proteins can be prepared using conventional recombinant DNA techniques. Vectors and cell lines that produce antibodies or fusion proteins can be selected, constructed and cultured using techniques known to those skilled in the art. These techniques are described in various laboratory manuals and major publications, such as Recombinant DNA Technology for Production of Protein Therapeutics in Cultured Mammalian Cells, D.L. hacker, F.M. Wurm, in Reference Module in Life Sciences, 2017, the entire contents of which, including supplementary content, are incorporated herein by reference.
- the DNA encoding the antibody or fusion protein can be designed and synthesized according to the amino acid sequence of the antibody or fusion protein described herein in a conventional manner, placed in an expression vector, and then transfected into a host cell, and the transfected host cell is cultured in a culture medium to produce a monoclonal antibody or fusion protein.
- the expression vector includes at least one promoter element, a protein coding sequence, a transcription termination signal, and a polyA tail. Other elements include enhancers, Kozak sequences, and donor and acceptor sites for RNA splicing on both sides of the insertion sequence.
- Efficient transcription can be obtained by the early and late promoters of SV40, the long terminal repeats from retroviruses such as RSV, HTLV1, HIVI, and the early promoters of cytomegalovirus, and promoters of other cells such as the actin promoter can also be used.
- Suitable expression vectors may include pIRES1neo, pRetro-Off, pRetro-On, pLXSN, pLNCX, pcDNA3.1 (+/-), pcDNA/Zeo (+/-), pcDNA3.1/Hygro (+/-), pSVL, pMSG, pRSVcat, pSV2dhfr, pBC12MI, pCS2, and pCHO1.0, etc.
- Commonly used mammalian host cells include HEK293 cells, Cos1 cells, Cos7 cells, CV1 cells, mouse L cells, and CHO cells, etc.
- the gene sequence of antibody or fusion protein can be inserted into expression vector by standard methods (for example, complementary restriction sites on connection gene sequence and carrier, or if restriction sites are not present, then flat end connection).
- expression vector can already carry antibody constant region sequence.
- a method for converting antibody-related VH and VL sequences into full-length antibody gene is to insert them into expression vectors encoding heavy chain constant region and light chain constant region respectively, so that VH sequence is operably connected to CH sequence in carrier, and VL sequence is operably connected to CL sequence in carrier.
- recombinant expression vector can encode signal peptide that promotes host cell secretion of antibody or fusion protein.
- gene sequence can be cloned into the carrier of signal peptide that promotes host cell secretion of antibody or fusion protein, so that 3' end of gene sequence encoding signal peptide is connected in frame with 5' end of gene sequence encoding antibody (heavy chain and/or light chain) or fusion protein.
- the expression vector needs to contain a screening marker, and common screening markers include dihydrofolate reductase, glutamine synthetase, neomycin resistance, hygromycin resistance and other screening genes, so as to facilitate the screening and separation of successfully transfected cells.
- the constructed plasmid is transfected into host cells without the above genes, and after culturing in a selective medium, the successfully transfected cells grow in large quantities and produce the desired target protein.
- the obtained antibody or fusion protein can be separated or purified by conventional technical means, such as protein A-agarose gel, ion exchange chromatography, hydroxyapatite chromatography, gel electrophoresis or affinity chromatography.
- Example 1 Preparation of PVRIG recombinant protein and anti-PVRIG antibodies SF35 and H4
- the DNA sequence of the PVRIG recombinant protein PVRIG-his (shown in SEQ ID NO: 1) was inserted into the expression plasmid to obtain a recombinant plasmid.
- the above plasmid was then transiently transfected into HEK293 cells through polyetherimide (PEI), and the supernatant was collected after culture and purified to obtain a PVRIG-his protein sample.
- PEI polyetherimide
- amino acid sequence of PVRIG-his is as follows:
- the amino acid sequences of the heavy and light chains of antibody SF35 and antibody H4 are shown in Table 3.
- the nucleic acid sequences of the heavy and light chains of the antibodies were cloned into expression plasmids, respectively, and then transferred into CHO-K1 cells. After culture, the supernatant was collected and purified to obtain the antibodies.
- Example 2 Preparation of anti-PVRIG/TIGIT bispecific antibodies and VHH-Fc fusion proteins
- bispecific antibody Bi-VH1 whose schematic diagram is shown in FIG1A
- bispecific antibody Bi-VH3 whose schematic diagram is shown in FIG1B
- the structural feature of the bispecific antibody Bi-VH1 is that the anti-PVRIG VHH fragment is connected to the N-terminus of the heavy chain of the anti-TIGIT antibody, such as the bispecific antibodies Bi-VH1-94Y and Bi-VH1-94W
- the structural feature of the bispecific antibody Bi-VH3 is that the anti-PVRIG VHH fragment is connected to the C-terminus of the heavy chain of the anti-TIGIT antibody, such as the bispecific antibodies Bi-VH3-94Y and Bi-VH3-94W.
- the VHH-Fc fusion protein comprises the following structures from the N-terminus to the C-terminus: the anti-PVRIG VHH fragment, the peptide linker and the Fc fragment.
- VHH-Fc fusion protein N1-94Y-Fc contains two identical sequences (as shown in SEQ ID NO:36), and its nucleic acid sequence is shown in SEQ ID NO:46
- VHH-Fc fusion protein N1-94W-Fc contains two identical sequences (as shown in SEQ ID NO:37), and its nucleic acid sequence is shown in SEQ ID NO:47
- VHH-Fc fusion protein 32 contains two identical sequences (as shown in SEQ ID NO:38), and its nucleic acid sequence is shown in SEQ ID NO:48
- VHH-Fc fusion protein 34 contains two identical sequences (as shown in SEQ ID NO:39), and its nucleic acid sequence is shown in SEQ ID NO:49
- VHH-Fc fusion protein 37 contains two identical sequences (as shown in SEQ ID NO:40), and its nucleic acid sequence is shown in SEQ ID NO:
- the bispecific antibody Bi-VH1-94Y contains two first polypeptides with identical sequences (as shown in SEQ ID NO:41) and two second polypeptides with identical sequences (as shown in SEQ ID NO:31), the first polypeptide is composed of an anti-PVRIG VHH fragment (as shown in SEQ ID NO:13), a peptide linker L1 (GGGGSGGGGS, as shown in SEQ ID NO:32) and an anti-TIGIT heavy chain sequence (as shown in SEQ ID NO:29), and the second polypeptide is composed of an anti-TIGIT light chain sequence (as shown in SEQ ID NO:31), the nucleic acid sequence of the first polypeptide is as shown in SEQ ID NO:51, and the nucleic acid sequence of the second polypeptide is as shown in SEQ ID NO:45;
- the heterologous antibody Bi-VH1-94W contains two first polypeptides with identical sequences (as shown in SEQ ID NO:42) and two second poly
- the nucleic acid sequences of the first polypeptide and the second polypeptide of the bispecific antibody are cloned into expression plasmids respectively, and then transiently transfected into HEK293F cells. After culture, the supernatant is collected and purified to obtain the bispecific antibody.
- the nucleic acid sequence of the VHH-Fc fusion protein is cloned into an expression plasmid, and then transiently transfected into HEK293F cells. After culture, the supernatant is collected and purified to obtain the VHH-Fc fusion protein.
- Biacore T200 was used to detect the affinity of antibodies and VHH-Fc fusion proteins to PVRIG-his and TIGIT-his proteins.
- Antibodies or VHH-Fc fusion proteins were coupled to the surface of the CM5 chip, and then the chip was used to capture PVRIG-his or TIGIT-his, respectively.
- Different concentrations of PVRIG-his or TIGIT-his proteins were injected into the CM5 chip.
- VHH-Fc fusion proteins 32, 34, and 37 showed strong affinity to PVRIG-his protein, with KD values of 0.65nM, 0.89nM, and 0.96nM, respectively.
- bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W, and parent anti-TIGIT antibody h10D8OF dilute them to 200 nM with 1 ⁇ PBS as the starting concentration in a 96-well V-shaped plate, and perform 3-fold gradient dilution with 1 ⁇ PBS to obtain a total of 9 serial dilution concentrations.
- the cells were collected by flow cytometry, and the fluorescent antibodies bound to the cell surface were detected to obtain the mean fluorescence intensity (MFI) value of the original data.
- MFI mean fluorescence intensity
- the full-length human TIGIT gene sequence is as follows:
- Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W VHH-Fc fusion proteins N1-94W-Fc, N1-94Y-Fc, 32, 34 and 37, and antibodies SF35 and hIgG1 (Beijing Sino Biological Technology Co., Ltd., Cat. No. MA14OC2903).
- the cDNA of PVRIG (purchased from Beijing Sino Biological Shenzhou Technology Co., Ltd., catalog number HG28312-UT) was transferred into Jurkat-NFAT cells (Construction of Jurkat-NFAT cells: Plasmid containing NFAT luciferase reporter gene was electroporated into Jurkat cells) to obtain Jurkat-NFAT cells overexpressing PVRIG, named Jurkat-NFAT-PVRIG.
- Jurkat-NFAT-PVRIG cells with good growth were taken, centrifuged and the supernatant was discarded, and the cells were resuspended in 1 ⁇ PBS to a density of 1 ⁇ 10 7 cells/mL, and added to a 96-well V-shaped plate (Corning, catalog number: 3897) at a rate of 50 ⁇ L/well. At this time, the number of cells was 5 ⁇ 10 5 cells/well. 50 ⁇ L of the corresponding concentration of antibody or VHH-Fc fusion protein sample was added to each well and mixed. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein was 100 nM.
- the 96-well V-shaped plate was placed in a 4°C refrigerator for incubation for 60 minutes. After the incubation was completed, the 96-well V-shaped plate was centrifuged to remove the supernatant, and then washed with 1 ⁇ PBS and the supernatant was removed for the next incubation.
- Anti-FC PE purchased from BioLegend, catalog number 366903
- VHH-Fc fusion proteins 32, 34 and 37 can bind to human PVRIG highly expressed on the surface of Jurkat-NFAT-PVRIG cells with high affinity.
- the EC50 of VHH-Fc fusion protein 32 is 0.67nM
- the EC50 of VHH-Fc fusion protein 34 is 0.95nM
- the EC50 of VHH-Fc fusion protein 37 is 0.87nM.
- the bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W can all bind to Jurkat-NFAT-PVRIG cells significantly, with EC 50 values of 0.26 nM, 0.32 nM, 1.72 nM and 2.33 nM, respectively.
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Abstract
Description
本发明属于生物医药领域,尤其涉及PVRIG结合蛋白、双特异性抗体及其应用。The present invention belongs to the field of biomedicine, and in particular relates to PVRIG binding protein, bispecific antibody and application thereof.
大多数T和NK细胞共抑制受体是免疫球蛋白(Ig)超家族的成员,当其与抗原呈递细胞或肿瘤细胞上表达的相应配体结合时,通过蛋白酪氨酸磷酸酶(如SHIP-1、SHP-2)减弱细胞活化,最终导致效应功能降低和抑制基因的表达。受体阻断剂是能够特异性识别某些受体并与其结合,阻止其相应配体与其结合。在肿瘤治疗中,通过受体阻断剂阻断共抑制受体与其配体结合,有助于激活免疫细胞的活性,提高抗肿瘤功效。Most T and NK cell co-inhibitory receptors are members of the immunoglobulin (Ig) superfamily. When they bind to the corresponding ligands expressed on antigen presenting cells or tumor cells, they weaken cell activation through protein tyrosine phosphatases (such as SHIP-1 and SHP-2), ultimately leading to reduced effector function and inhibiting gene expression. Receptor blockers are able to specifically recognize and bind to certain receptors, preventing their corresponding ligands from binding to them. In tumor treatment, blocking the binding of co-inhibitory receptors to their ligands through receptor blockers helps activate the activity of immune cells and improve anti-tumor efficacy.
PVRIG是属于脊髓灰质炎病毒受体(PVR)家族的共抑制受体,又被称为CD112R,通常在自然杀伤细胞(NK)和CD8+T细胞上表达。人的PVRIG为一个36kD的单次跨膜蛋白,包含一个跨膜区、一个长的细胞内结构域和一个细胞外免疫球蛋白可变(IgV)结构域。由于CD226和PVRIG在CD112上有相同的结合位点,CD226与抑制性免疫检查点PVRIG竞争结合CD112,以促进T细胞活化。因此,PVRIG可显著抑制T细胞中CD112/CD226的相互作用。PVRIG is a co-inhibitory receptor belonging to the poliovirus receptor (PVR) family, also known as CD112R, which is usually expressed on natural killer cells (NK) and CD8+T cells. Human PVRIG is a 36kD single-pass transmembrane protein that contains a transmembrane region, a long intracellular domain, and an extracellular immunoglobulin variable (IgV) domain. Since CD226 and PVRIG have the same binding site on CD112, CD226 competes with the inhibitory immune checkpoint PVRIG for binding to CD112 to promote T cell activation. Therefore, PVRIG can significantly inhibit the CD112/CD226 interaction in T cells.
本发明的目的在于提供PVRIG结合蛋白、双特异性抗体或抗原结合片段及其应用。The object of the present invention is to provide a PVRIG binding protein, a bispecific antibody or an antigen-binding fragment and applications thereof.
一方面,本发明提供一种双特异性抗体或抗原结合片段,所述双特异性抗体或抗原结合片段包含能够与PVRIG结合的第一抗原结合部分;所述第一抗原结合部分包含(a)-(c)中一种或多种氨基酸序列:In one aspect, the present invention provides a bispecific antibody or antigen-binding fragment, comprising a first antigen-binding portion capable of binding to PVRIG; the first antigen-binding portion comprises one or more amino acid sequences of (a)-(c):
(a)HCDR1,其包含SEQ ID NO:6所示的氨基酸序列,或与SEQ ID NO:6所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(a) HCDR1, which comprises the amino acid sequence shown in SEQ ID NO:6, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:6;
(b)HCDR2,其包含SEQ ID NO:7所示的氨基酸序列,或与SEQ ID NO:7所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(b) HCDR2, which comprises the amino acid sequence shown in SEQ ID NO:7, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:7;
(c)HCDR3,其包含SEQ ID NO:8-12任一项所示的氨基酸序列,或与SEQ ID NO:8-12任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。(c) HCDR3, which comprises the amino acid sequence shown in any one of SEQ ID NOs: 8-12, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in any one of SEQ ID NOs: 8-12.
在一些实施方案中,所述第一抗原结合部分包含重链可变区(VH),所述VH包含HCDR1、HCDR2和HCDR3;其中HCDR1包含SEQ ID NO:6所示的氨基酸序列;HCDR2包含SEQ ID NO:7所示的氨基酸序列;HCDR3包含SEQ ID NO:8-12任一项所示的氨基酸序列。In some embodiments, the first antigen binding portion comprises a heavy chain variable region (VH), wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; and HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12.
在一些实施方案中,所述第一抗原结合部分为单域抗体。In some embodiments, the first antigen binding moiety is a single domain antibody.
在一些实施方案中,所述单域抗体包含SEQ ID NO:13-17任一项所示的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the single domain antibody comprises the amino acid sequence shown in any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in any one of SEQ ID NOs: 13-17.
在一些实施方案中,所述双特异性抗体或抗原结合片段包含能够与其它抗原结合的第二抗原结合部分。在一些实施方案中,所述其它抗原为TIGIT。在一些实施方案中,所述第二抗原结合部分为抗TIGIT抗体或抗原结合片段。在一些实施方案中,所述抗TIGIT抗体选自Tiragolumab,欧司珀利单抗(Ociperlimab),专利CN108290946A中描述的抗TIGIT抗体,例如1A4、1A5、1D3、4A3、10A7和4.1D3,专利CN108137691A中描述的抗TIGIT抗体,例如VSIG9#1和258-cs1#4,专利CN108290936A中描述的抗TIGIT抗体,例如14D7和26B10,专利CN109071620A中描述的抗TIGIT抗体,例如313R11、313R12、313R14、313R19和313R20,专利CN107207594A中描述的抗TIGIT抗体,例如14B2、13E6、6F9、11G11、10C9、16F6、11C9、10D7、20G6、24E8、24G1、27F1、15A6、4E4、13D1、9B11、10B8、22G2、19H2、8C8、17G4、25E7、26D8和16A8,专利CN107148430A中描述的抗TIGIT抗体,例如14A6、28H5和31C6,专利US2013/0251720中描述的抗TIGIT抗体,例如10A7和1F4。In some embodiments, the bispecific antibody or antigen-binding fragment comprises a second antigen-binding portion capable of binding to other antigens. In some embodiments, the other antigen is TIGIT. In some embodiments, the second antigen-binding portion is an anti-TIGIT antibody or antigen-binding fragment. In some embodiments, the anti-TIGIT antibody is selected from Tiragolumab, Ociperlimab, anti-TIGIT antibodies described in patent CN108290946A, such as 1A4, 1A5, 1D3, 4A3, 10A7 and 4.1D3, anti-TIGIT antibodies described in patent CN108137691A, such as VSIG9#1 and 258-cs1#4, anti-TIGIT antibodies described in patent CN108290936A, such as 14D7 and 26B10, anti-TIGIT antibodies described in patent CN109071620A, such as 313R11, 313R12, 313R14 , 313R19 and 313R20, anti-TIGIT antibodies described in patent CN107207594A, such as 14B2, 13E6, 6F9, 11G11, 10C9, 16F6, 11C9, 10D7, 20G6, 24E8, 24G1, 27F1, 15A6, 4E4, 13D1, 9B11, 10B8, 22G2, 19H2, 8C8, 17G4, 25E7, 26D8 and 16A8, anti-TIGIT antibodies described in patent CN107148430A, such as 14A6, 28H5 and 31C6, anti-TIGIT antibodies described in patent US2013/0251720, such as 10A7 and 1F4.
在一些实施方案中,所述第二抗原结合部分通过肽接头与第一抗原结合部分连接。在一些实施方案中,所述第二抗原结合部分为抗TIGIT抗体,抗体重链的N端或C端通过肽接头与第一抗原结合部分连接。在一些实施方案中,抗体重链的N端通过肽接头与单域抗体的C端连接。在一些实施方案中,抗体重链的C端通过肽接头与单域抗体的N端连接。In some embodiments, the second antigen binding moiety is connected to the first antigen binding moiety via a peptide linker. In some embodiments, the second antigen binding moiety is an anti-TIGIT antibody, and the N-terminus or C-terminus of the antibody heavy chain is connected to the first antigen binding moiety via a peptide linker. In some embodiments, the N-terminus of the antibody heavy chain is connected to the C-terminus of the single domain antibody via a peptide linker. In some embodiments, the C-terminus of the antibody heavy chain is connected to the N-terminus of the single domain antibody via a peptide linker.
在一些实施方案中,所述肽接头包含甘氨酸和丝氨酸。在一些实施方案中,所述肽接头的氨基酸序列为(GmS)n,其中每个m独立为2、3、4、5或6,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头的氨基酸序列为(GGGGS)n,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头为(GGGGS)2,如SEQ ID NO:32所示。在一些实施方案中,所述肽接头为(GGGGS)3,如SEQ ID NO:33所示。In some embodiments, the peptide linker comprises glycine and serine. In some embodiments, the amino acid sequence of the peptide linker is ( GmS ) n , wherein each m is independently 2, 3, 4, 5 or 6, and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the amino acid sequence of the peptide linker is (GGGGS) n , and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the peptide linker is (GGGGS) 2 , as shown in SEQ ID NO:32. In some embodiments, the peptide linker is (GGGGS) 3 , as shown in SEQ ID NO:33.
另一方面,本发明提供一种双特异性抗体或抗原结合片段,所述双特异性抗体或抗原结合片段包含能够与TIGIT结合的第二抗原结合部分;所述第二抗原结合部分包含(d)-(i)中一种或多种氨基酸序列:In another aspect, the present invention provides a bispecific antibody or antigen-binding fragment, comprising a second antigen-binding portion capable of binding to TIGIT; the second antigen-binding portion comprises one or more amino acid sequences of (d)-(i):
(d)HCDR1,其包含SEQ ID NO:18所示的氨基酸序列,或与SEQ ID NO:18所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(d) HCDR1 comprising the amino acid sequence shown in SEQ ID NO: 18, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 18;
(e)HCDR2,其包含SEQ ID NO:19所示的氨基酸序列,或与SEQ ID NO:19所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(e) HCDR2, which comprises the amino acid sequence shown in SEQ ID NO: 19, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 19;
(f)HCDR3,其包含SEQ ID NO:20所示的氨基酸序列,或与SEQ ID NO:20所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(f) HCDR3 comprising the amino acid sequence shown in SEQ ID NO: 20, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 20;
(g)LCDR1,其包含SEQ ID NO:21所示的氨基酸序列,或与SEQ ID NO:21所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(g) LCDR1, which comprises the amino acid sequence shown in SEQ ID NO:21, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:21;
(h)LCDR2,其包含SEQ ID NO:22所示的氨基酸序列,或与SEQ ID NO:22所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(h) LCDR2, which comprises the amino acid sequence shown in SEQ ID NO:22, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:22;
(i)LCDR3,其包含SEQ ID NO:23所示的氨基酸序列,或与SEQ ID NO:23所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。(i) LCDR3, which comprises the amino acid sequence shown in SEQ ID NO:23, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:23.
在一些实施方案中,所述第二抗原结合部分包含重链可变区(VH),所述VH包含HCDR1、HCDR2和HCDR3;其中HCDR1包含SEQ ID NO:18所示的氨基酸序列;HCDR2包含SEQ ID NO:19所示的氨基酸序列;HCDR3包含SEQ ID NO:20所示的氨基酸序列。In some embodiments, the second antigen binding portion comprises a heavy chain variable region (VH), wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; and HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20.
在一些实施方案中,所述第二抗原结合部分包含轻链可变区(VL),所述VL包含LCDR1、LCDR2和LCDR3;其中LCDR1包含SEQ ID NO:21所示的氨基酸序列;LCDR2包含SEQ ID NO:22所示的氨基酸序列;LCDR3包含SEQ ID NO:23所示的氨基酸序列。In some embodiments, the second antigen binding portion comprises a light chain variable region (VL), wherein the VL comprises LCDR1, LCDR2 and LCDR3; wherein LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; and LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
在一些实施方案中,所述第二抗原结合部分包含VH和VL;所述VH包含HCDR1、HCDR2和HCDR3;所述VL包含LCDR1、LCDR2和LCDR3;其中HCDR1包含SEQ ID NO:18所示的氨基酸序列;HCDR2包含SEQ ID NO:19所示的氨基酸序列;HCDR3包含SEQ ID NO:20所示的氨基酸序列;LCDR1包含SEQ ID NO:21所示的氨基酸序列;LCDR2包含SEQ ID NO:22所示的氨基酸序列;LCDR3包含SEQ ID NO:23所示的氨基酸序列。In some embodiments, the second antigen binding portion comprises VH and VL; the VH comprises HCDR1, HCDR2 and HCDR3; the VL comprises LCDR1, LCDR2 and LCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20; LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
在一些实施方案中,所述第二抗原结合部分的重链可变区包含SEQ ID NO:24所示的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:24.
在一些实施方案中,所述第二抗原结合部分的轻链可变区包含SEQ ID NO:25所示的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:25.
在一些实施方案中,所述第二抗原结合部分的重链可变区包含SEQ ID NO:24所示的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述第二抗原结合部分的轻链可变区包含SEQ ID NO:25所示的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:24. the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:25.
在一些实施方案中,所述第二抗原结合部分的重链可变区包含SEQ ID NO:24所示的氨基酸序列,所述第二抗原结合部分的轻链可变区包含SEQ ID NO:25所示的氨基酸序列。In some embodiments, the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, and the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25.
在一些实施方案中,所述第二抗原结合部分还包含重链恒定区和轻链恒定区。在一些实施方案中,所述第二抗原结合部分的重链恒定区包含SEQ ID NO:26或27所示的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的轻链恒定区包含SEQ ID NO:28所示的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的重链恒定区包含SEQ ID NO:26或27所示的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述第二抗原结合部分的轻链恒定区包含SEQ ID NO:28所示的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的重链恒定区包含SEQ ID NO:26或27所示的氨基酸序列,所述第二抗原结合部分的轻链恒定区包含SEQ ID NO:28所示的氨基酸序列。In some embodiments, the second antigen binding portion further comprises a heavy chain constant region and a light chain constant region. In some embodiments, the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence set forth in SEQ ID NO: 26 or 27. In some embodiments, the light chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:28, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:28, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:28. In some embodiments, the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:26 or 27, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:26 or 27, or having one or more conservative amino acids compared to the amino acid sequence shown in SEQ ID NO:26 or 27. substituted amino acid sequence; the light chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO: 28, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO: 28, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 28. In some embodiments, the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO: 26 or 27, and the light chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO: 28.
在一些实施方案中,所述第二抗原结合部分为抗体,所述抗体包含重链和轻链。在一些实施方案中,所述抗体的重链包含SEQ ID NO:29或30所示的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述抗体的轻链包含SEQ ID NO:31所示的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述抗体的重链包含SEQ ID NO:29或30所示的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述抗体的轻链包含SEQ ID NO:31所示的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述抗体的重链包含SEQ ID NO:29或30所示的氨基酸序列,所述抗体的轻链包含SEQ ID NO:31所示的氨基酸序列。In some embodiments, the second antigen binding moiety is an antibody comprising a heavy chain and a light chain. In some embodiments, the heavy chain of the antibody comprises the amino acid sequence set forth in SEQ ID NO: 29 or 30, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO: 29 or 30, or an amino acid sequence having one or more conservative amino acid substitutions to the amino acid sequence set forth in SEQ ID NO: 29 or 30. In some embodiments, the light chain of the antibody comprises the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:31. In some embodiments, the heavy chain of the antibody comprises the amino acid sequence shown in SEQ ID NO:29 or 30, or an amino acid sequence that has at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:29 or 30, or has one or more conservative amino acids compared to the amino acid sequence shown in SEQ ID NO:29 or 30. The light chain of the antibody comprises the amino acid sequence set forth in SEQ ID NO:31, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO:31, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence set forth in SEQ ID NO:31. In some embodiments, the heavy chain of the antibody comprises the amino acid sequence set forth in SEQ ID NO:29 or 30, and the light chain of the antibody comprises the amino acid sequence set forth in SEQ ID NO:31.
在一些实施方案中,所述双特异性抗体或抗原结合片段包含能够与其它抗原结合的第一抗原结合部分。在一些实施方案中,所述其它抗原为PVRIG。In some embodiments, the bispecific antibody or antigen-binding fragment comprises a first antigen-binding portion capable of binding to an additional antigen. In some embodiments, the additional antigen is PVRIG.
在一些实施方案中,所述第一抗原结合部分为单域抗体。In some embodiments, the first antigen binding moiety is a single domain antibody.
在一些实施方案中,抗体重链的N端通过肽接头与单域抗体的C端连接。在一些实施方案中,抗体重链的C端通过肽接头与单域抗体的N端连接。在一些实施方案中,所述第二抗原结合部分通过肽接头与第一抗原结合部分连接。在一些实施方案中,所述第二抗原结合部分为抗体,抗体重链的N端或C端通过肽接头与第一抗原结合部分连接。在一些实施方案中,抗体重链的N端通过肽接头与单域抗体的C端连接。在一些实施方案中,抗体重链的C端通过肽接头与单域抗体的N端连接。In some embodiments, the N-terminus of the antibody heavy chain is connected to the C-terminus of the single-domain antibody through a peptide linker. In some embodiments, the C-terminus of the antibody heavy chain is connected to the N-terminus of the single-domain antibody through a peptide linker. In some embodiments, the second antigen binding moiety is connected to the first antigen binding moiety through a peptide linker. In some embodiments, the second antigen binding moiety is an antibody, and the N-terminus or C-terminus of the antibody heavy chain is connected to the first antigen binding moiety through a peptide linker. In some embodiments, the N-terminus of the antibody heavy chain is connected to the C-terminus of the single-domain antibody through a peptide linker. In some embodiments, the C-terminus of the antibody heavy chain is connected to the N-terminus of the single-domain antibody through a peptide linker.
在一些实施方案中,所述肽接头包含甘氨酸和丝氨酸。在一些实施方案中,所述肽接头的氨基酸序列为(GmS)n,其中每个m独立为2、3、4、5或6,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头的氨基酸序列为(GGGGS)n,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头为(GGGGS)2,如SEQ ID NO:32所示。在一些实施方案中,所述肽接头为(GGGGS)3,如SEQ ID NO:33所示。In some embodiments, the peptide linker comprises glycine and serine. In some embodiments, the amino acid sequence of the peptide linker is ( GmS ) n , wherein each m is independently 2, 3, 4, 5 or 6, and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the amino acid sequence of the peptide linker is (GGGGS) n , and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the peptide linker is (GGGGS) 2 , as shown in SEQ ID NO:32. In some embodiments, the peptide linker is (GGGGS) 3 , as shown in SEQ ID NO:33.
另一方面,本发明提供一种双特异性抗体或抗原结合片段,所述双特异性抗体或抗原结合片段包含能够与PVRIG结合的第一抗原结合部分,以及能够与TIGIT结合的第二抗原结合部分;其中In another aspect, the present invention provides a bispecific antibody or antigen-binding fragment, comprising a first antigen-binding portion capable of binding to PVRIG, and a second antigen-binding portion capable of binding to TIGIT; wherein
所述第一抗原结合部分包含(a)-(c)中一种或多种氨基酸序列:The first antigen binding portion comprises one or more amino acid sequences of (a)-(c):
(a)HCDR1,其包含SEQ ID NO:6所示的氨基酸序列,或与SEQ ID NO:6所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(a) HCDR1, which comprises the amino acid sequence shown in SEQ ID NO:6, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:6;
(b)HCDR2,其包含SEQ ID NO:7所示的氨基酸序列,或与SEQ ID NO:7所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(b) HCDR2, which comprises the amino acid sequence shown in SEQ ID NO:7, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:7;
(c)HCDR3,其包含SEQ ID NO:8-12任一项所示的氨基酸序列,或与SEQ ID NO:8-12任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(c) HCDR3 comprising an amino acid sequence as shown in any one of SEQ ID NOs: 8-12, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence as shown in any one of SEQ ID NOs: 8-12;
所述第二抗原结合部分包含(d)-(i)中一种或多种氨基酸序列:The second antigen binding portion comprises one or more amino acid sequences of (d)-(i):
(d)HCDR1,其包含SEQ ID NO:18所示的氨基酸序列,或与SEQ ID NO:18所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(d) HCDR1 comprising the amino acid sequence shown in SEQ ID NO: 18, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 18;
(e)HCDR2,其包含SEQ ID NO:19所示的氨基酸序列,或与SEQ ID NO:19所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(e) HCDR2, which comprises the amino acid sequence shown in SEQ ID NO: 19, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 19;
(f)HCDR3,其包含SEQ ID NO:20所示的氨基酸序列,或与SEQ ID NO:20所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(f) HCDR3 comprising the amino acid sequence shown in SEQ ID NO: 20, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 20;
(g)LCDR1,其包含SEQ ID NO:21所示的氨基酸序列,或与SEQ ID NO:21所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(g) LCDR1, which comprises the amino acid sequence shown in SEQ ID NO:21, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:21;
(h)LCDR2,其包含SEQ ID NO:22所示的氨基酸序列,或与SEQ ID NO:22所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(h) LCDR2, which comprises the amino acid sequence shown in SEQ ID NO:22, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:22;
(i)LCDR3,其包含SEQ ID NO:23所示的氨基酸序列,或与SEQ ID NO:23所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。(i) LCDR3, which comprises the amino acid sequence shown in SEQ ID NO:23, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:23.
在一些实施方案中,所述第一抗原结合部分包含重链可变区(VH),所述VH包含HCDR1、HCDR2和HCDR3;其中HCDR1包含SEQ ID NO:6所示的氨基酸序列;HCDR2包含SEQ ID NO:7所示的氨基酸序列;HCDR3包含SEQ ID NO:8-12任一项所示的氨基酸序列。在一些实施方案中,所述第二抗原结合部分包含VH和VL;所述VH包含HCDR1、HCDR2和HCDR3;所述VL包含LCDR1、LCDR2和LCDR3;其中HCDR1包含SEQ ID NO:18所示的氨基酸序列;HCDR2包含SEQ ID NO:19所示的氨基酸序列;HCDR3包含SEQ ID NO:20所示的氨基酸序列;LCDR1包含SEQ ID NO:21所示的氨基酸序列;LCDR2包含SEQ ID NO:22所示的氨基酸序列;LCDR3包含SEQ ID NO:23所示的氨基酸序列。In some embodiments, the first antigen-binding portion comprises a heavy chain variable region (VH), wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12. In some embodiments, the second antigen-binding portion comprises VH and VL; wherein the VH comprises HCDR1, HCDR2 and HCDR3; wherein the VL comprises LCDR1, LCDR2 and LCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20; LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
在一些实施方案中,所述第一抗原结合部分包含重链可变区(VH),所述VH包含HCDR1、HCDR2和HCDR3;其中HCDR1包含SEQ ID NO:6所示的氨基酸序列;HCDR2包含SEQ ID NO:7所示的氨基酸序列;HCDR3包含SEQ ID NO:8-12任一项所示的氨基酸序列;所述第二抗原结合部分包含VH和VL;所述VH包含HCDR1、HCDR2和HCDR3;所述VL包含LCDR1、LCDR2和LCDR3;其中HCDR1包含SEQ ID NO:18所示的氨基酸序列;HCDR2包含SEQ ID NO:19所示的氨基酸序列;HCDR3包含SEQ ID NO:20所示的氨基酸序列;LCDR1包含SEQ ID NO:21所示的氨基酸序列;LCDR2包含SEQ ID NO:22所示的氨基酸序列;LCDR3包含SEQ ID NO:23所示的氨基酸序列。In some embodiments, the first antigen binding portion comprises a heavy chain variable region (VH), the VH comprising HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12; the second antigen binding portion comprises VH and VL; the VH comprises HCDR1, HCDR2 and HCDR3; the VL comprises LCDR1, LCDR2 and LCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:18; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:19; HCDR3 comprises the amino acid sequence shown in SEQ ID NO:20; LCDR1 comprises the amino acid sequence shown in SEQ ID NO:21; LCDR2 comprises the amino acid sequence shown in SEQ ID NO:22; LCDR3 comprises the amino acid sequence shown in SEQ ID NO:23.
在一些实施方案中,所述第一抗原结合部分为单域抗体。在一些实施方案中,所述单域抗体包含SEQ ID NO:13-17任一项所示的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的重链可变区包含SEQ ID NO:24所示的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;和/或所述第二抗原结合部分的轻链可变区包含SEQ ID NO:25所示的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the first antigen binding moiety is a single domain antibody. In some embodiments, the single domain antibody comprises an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions to an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17. In some embodiments, the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:24, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:24. sequence; and/or the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:25, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:25.
在一些实施方案中,所述第一抗原结合部分为单域抗体,包含SEQ ID NO:13-17任一项所示的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述第二抗原结合部分的重链可变区包含SEQ ID NO:24所示的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:24所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述第二抗原结合部分的轻链可变区包含SEQ ID NO:25所示的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:25所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the first antigen binding portion is a single domain antibody comprising the amino acid sequence of any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence of any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence of any one of SEQ ID NOs: 13-17; the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence of SEQ ID NO: 24, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence of any one of SEQ ID NOs: 13-17. : The light chain variable region of the second antigen binding portion comprises an amino acid sequence as shown in SEQ ID NO:25, or an amino acid sequence with at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence as shown in SEQ ID NO:25, or an amino acid sequence with at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence as shown in SEQ ID NO:25, or an amino acid sequence with one or more conservative amino acid substitutions compared to the amino acid sequence as shown in SEQ ID NO:25.
在一些实施方案中,所述第一抗原结合部分为单域抗体,包含SEQ ID NO:13-17任一项所示的氨基酸序列;所述第二抗原结合部分的重链可变区包含SEQ ID NO:24所示的氨基酸序列;所述第二抗原结合部分的轻链可变区包含SEQ ID NO:25所示的氨基酸序列。In some embodiments, the first antigen binding portion is a single domain antibody, comprising the amino acid sequence shown in any one of SEQ ID NO:13-17; the heavy chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:24; and the light chain variable region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:25.
在一些实施方案中,所述第二抗原结合部分还包含重链恒定区和轻链恒定区。在一些实施方案中,所述第二抗原结合部分的重链恒定区包含SEQ ID NO:26或27所示的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的轻链恒定区包含SEQ ID NO:28所示的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的重链恒定区包含SEQ ID NO:26或27所示的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:26或27所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述第二抗原结合部分的轻链恒定区包含SEQ ID NO:28所示的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:28所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述第二抗原结合部分的重链恒定区包含SEQ ID NO:26或27所示的氨基酸序列,所述第二抗原结合部分的轻链恒定区包含SEQ ID NO:28所示的氨基酸序列。In some embodiments, the second antigen binding portion further comprises a heavy chain constant region and a light chain constant region. In some embodiments, the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO: 26 or 27, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence set forth in SEQ ID NO: 26 or 27. In some embodiments, the light chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:28, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:28, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:28. In some embodiments, the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO:26 or 27, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:26 or 27, or having one or more conservative amino acids compared to the amino acid sequence shown in SEQ ID NO:26 or 27. substituted amino acid sequence; the light chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO: 28, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO: 28, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO: 28. In some embodiments, the heavy chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO: 26 or 27, and the light chain constant region of the second antigen binding portion comprises the amino acid sequence shown in SEQ ID NO: 28.
在一些实施方案中,所述第二抗原结合部分为抗体,所述抗体包含重链和轻链。在一些实施方案中,所述抗体的重链包含SEQ ID NO:29或30所示的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述抗体的轻链包含SEQ ID NO:31所示的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the second antigen binding moiety is an antibody comprising a heavy chain and a light chain. In some embodiments, the heavy chain of the antibody comprises the amino acid sequence set forth in SEQ ID NO: 29 or 30, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence set forth in SEQ ID NO: 29 or 30, or an amino acid sequence having one or more conservative amino acid substitutions to the amino acid sequence set forth in SEQ ID NO: 29 or 30. In some embodiments, the light chain of the antibody comprises the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:31.
在一些实施方案中,所述第二抗原结合部分通过肽接头与第一抗原结合部分连接。在一些实施方案中,所述第二抗原结合部分为抗体,抗体重链的N端或C端通过肽接头与第一抗原结合部分连接。在一些实施方案中,抗体重链的N端通过肽接头与单域抗体的C端连接。在一些实施方案中,抗体重链的C端通过肽接头与单域抗体的N端连接。In some embodiments, the second antigen binding moiety is connected to the first antigen binding moiety via a peptide linker. In some embodiments, the second antigen binding moiety is an antibody, and the N-terminus or C-terminus of the antibody heavy chain is connected to the first antigen binding moiety via a peptide linker. In some embodiments, the N-terminus of the antibody heavy chain is connected to the C-terminus of the single domain antibody via a peptide linker. In some embodiments, the C-terminus of the antibody heavy chain is connected to the N-terminus of the single domain antibody via a peptide linker.
在一些实施方案中,所述肽接头包含甘氨酸和丝氨酸。在一些实施方案中,所述肽接头的氨基酸序列为(GmS)n,其中每个m独立为2、3、4、5或6,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头的氨基酸序列为(GGGGS)n,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头为(GGGGS)2,如SEQ ID NO:32所示。在一些实施方案中,所述肽接头为(GGGGS)3,如SEQ ID NO:33所示。In some embodiments, the peptide linker comprises glycine and serine. In some embodiments, the amino acid sequence of the peptide linker is ( GmS ) n , wherein each m is independently 2, 3, 4, 5 or 6, and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the amino acid sequence of the peptide linker is (GGGGS) n , and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the peptide linker is (GGGGS) 2 , as shown in SEQ ID NO:32. In some embodiments, the peptide linker is (GGGGS) 3 , as shown in SEQ ID NO:33.
另一方面,本发明提供一种双特异性抗体或抗原结合片段,所述双特异性抗体或抗原结合片段包含能够与PVRIG结合的第一抗原结合部分,以及能够与TIGIT结合的第二抗原结合部分;其中In another aspect, the present invention provides a bispecific antibody or antigen-binding fragment, comprising a first antigen-binding portion capable of binding to PVRIG, and a second antigen-binding portion capable of binding to TIGIT; wherein
第一抗原结合部分为单域抗体,所述单域抗体包含SEQ ID NO:13-17任一项所示的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;The first antigen binding portion is a single domain antibody, which comprises an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions compared to an amino acid sequence as set forth in any one of SEQ ID NOs: 13-17;
第二抗原结合部分为抗TIGIT抗体,所述抗体的重链包含SEQ ID NO:29或30所示的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:29或30所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;所述抗体的轻链包含SEQ ID NO:31所示的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;The second antigen binding portion is an anti-TIGIT antibody, the heavy chain of which comprises the amino acid sequence shown in SEQ ID NO:29 or 30, or an amino acid sequence that is at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identical to the amino acid sequence shown in SEQ ID NO:29 or 30, or an amino acid sequence that is at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identical to the amino acid sequence shown in SEQ ID NO:29 or 30. The light chain of the antibody comprises the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:31;
所述抗TIGIT抗体重链的N端或C端通过肽接头与单域抗体连接;The N-terminus or C-terminus of the anti-TIGIT antibody heavy chain is connected to the single-domain antibody via a peptide linker;
所述肽接头的氨基酸序列为(GGGGS)n,n独立为1、2、3、4、5或6。The amino acid sequence of the peptide linker is (GGGGS) n , where n is independently 1, 2, 3, 4, 5 or 6.
在一些实施方案中,抗体重链的N端通过肽接头与单域抗体的C端连接。在一些实施方案中,抗体重链的C端通过肽接头与单域抗体的N端连接。In some embodiments, the N-terminus of the antibody heavy chain is connected to the C-terminus of the single domain antibody via a peptide linker. In some embodiments, the C-terminus of the antibody heavy chain is connected to the N-terminus of the single domain antibody via a peptide linker.
在一些实施方案中,所述肽接头为(GGGGS)2,如SEQ ID NO:32所示。在一些实施方案中,所述肽接头为(GGGGS)3,如SEQ ID NO:33所示。In some embodiments, the peptide linker is (GGGGS) 2 , as shown in SEQ ID NO: 32. In some embodiments, the peptide linker is (GGGGS) 3 , as shown in SEQ ID NO: 33.
另一方面,本发明提供一种双特异性抗体或抗原结合片段,所述双特异性抗体或抗原结合片段包含第一多肽和第二多肽;其中In another aspect, the present invention provides a bispecific antibody or antigen-binding fragment, comprising a first polypeptide and a second polypeptide;
所述第一多肽包含SEQ ID NO:41-44任一项所示的氨基酸序列,或与SEQ ID NO:41-44任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:41-44任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;和/或The first polypeptide comprises the amino acid sequence shown in any one of SEQ ID NOs:41-44, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in any one of SEQ ID NOs:41-44, or an amino acid sequence having one or more conservative amino acid substitutions with the amino acid sequence shown in any one of SEQ ID NOs:41-44; and/or
所述第二多肽包含SEQ ID NO:31所示的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:31所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。The second polypeptide comprises the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in SEQ ID NO:31, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:31.
在一些实施方案中,所述双特异性抗体或抗原结合片段包含第一多肽和第二多肽;所述第一多肽包含SEQ ID NO:41-44任一项所示的氨基酸序列;所述第二多肽包含SEQ ID NO:31所示的氨基酸序列。In some embodiments, the bispecific antibody or antigen-binding fragment comprises a first polypeptide and a second polypeptide; the first polypeptide comprises the amino acid sequence shown in any one of SEQ ID NO:41-44; and the second polypeptide comprises the amino acid sequence shown in SEQ ID NO:31.
另一方面,本发明提供一种PVRIG结合蛋白,其包含重链可变区,所述重链可变区包含(a)-(c)中一种或多种氨基酸序列:In another aspect, the present invention provides a PVRIG binding protein comprising a heavy chain variable region, wherein the heavy chain variable region comprises one or more amino acid sequences of (a)-(c):
(a)HCDR1,其包含SEQ ID NO:6所示的氨基酸序列,或与SEQ ID NO:6所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(a) HCDR1, which comprises the amino acid sequence shown in SEQ ID NO:6, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:6;
(b)HCDR2,其包含SEQ ID NO:7所示的氨基酸序列,或与SEQ ID NO:7所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列;(b) HCDR2, which comprises the amino acid sequence shown in SEQ ID NO:7, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in SEQ ID NO:7;
(c)HCDR3,其包含SEQ ID NO:8-12任一项所示的氨基酸序列,或与SEQ ID NO:8-12任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。(c) HCDR3, which comprises the amino acid sequence shown in any one of SEQ ID NOs: 8-12, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence shown in any one of SEQ ID NOs: 8-12.
在一些实施方案中,所述重链可变区包含HCDR1、HCDR2和HCDR3;其中HCDR1包含SEQ ID NO:6所示的氨基酸序列;HCDR2包含SEQ ID NO:7所示的氨基酸序列;HCDR3包含SEQ ID NO:8-12任一项所示的氨基酸序列。In some embodiments, the heavy chain variable region comprises HCDR1, HCDR2 and HCDR3; wherein HCDR1 comprises the amino acid sequence shown in SEQ ID NO:6; HCDR2 comprises the amino acid sequence shown in SEQ ID NO:7; HCDR3 comprises the amino acid sequence shown in any one of SEQ ID NO:8-12.
在一些实施方案中,所述重链可变区包含SEQ ID NO:13-17任一项所示的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:13-17任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。在一些实施方案中,所述重链可变区包含SEQ ID NO:13-17任一项所示的氨基酸序列。In some embodiments, the heavy chain variable region comprises the amino acid sequence set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the amino acid sequence set forth in any one of SEQ ID NOs: 13-17, or an amino acid sequence having one or more conservative amino acid substitutions to the amino acid sequence set forth in any one of SEQ ID NOs: 13-17. In some embodiments, the heavy chain variable region comprises the amino acid sequence set forth in any one of SEQ ID NOs: 13-17.
在一些实施方案中,所述PVRIG结合蛋白为单域抗体、重链抗体、单特异性抗体、双特异性抗体、多特异性抗体、Fab、Fab'、F(ab')2、F(ab)2、Fv或scFv。In some embodiments, the PVRIG binding protein is a single domain antibody, a heavy chain antibody, a monospecific antibody, a bispecific antibody, a multispecific antibody, a Fab, a Fab', a F(ab')2, a F(ab)2, a Fv, or a scFv.
在一些实施方案中,所述PVRIG结合蛋白为融合蛋白,还包含Fc片段。在一些实施方案中,所述Fc片段为免疫球蛋白的Fc片段或其变体,例如人IgG1、IgG2、IgG3或IgG4的Fc片段或其变体。在一些实施方案中,所述Fc片段包含SEQ ID NO:34或35所示的氨基酸序列,或与SEQ ID NO:34或35所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:34或35所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the PVRIG binding protein is a fusion protein and further comprises an Fc fragment. In some embodiments, the Fc fragment is an Fc fragment of an immunoglobulin or a variant thereof, such as an Fc fragment of human IgG1, IgG2, IgG3 or IgG4 or a variant thereof. In some embodiments, the Fc fragment comprises an amino acid sequence as set forth in SEQ ID NO: 34 or 35, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity to the amino acid sequence as set forth in SEQ ID NO: 34 or 35, or an amino acid sequence having one or more conservative amino acid substitutions compared to the amino acid sequence as set forth in SEQ ID NO: 34 or 35.
在一些实施方案中,所述重链可变区的C端通过肽接头与Fc片段的N端连接。在一些实施方案中,所述肽接头的氨基酸序列为(GmS)n,其中每个m独立为2、3、4、5或6,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头的氨基酸序列为(GGGGS)n,n独立为1、2、3、4、5或6。在一些实施方案中,所述肽接头包含SEQ ID NO:32或33所示的氨基酸序列。In some embodiments, the C-terminus of the heavy chain variable region is connected to the N-terminus of the Fc fragment via a peptide linker. In some embodiments, the amino acid sequence of the peptide linker is ( GmS ) n , wherein each m is independently 2, 3, 4, 5 or 6, and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the amino acid sequence of the peptide linker is (GGGGS) n , and n is independently 1, 2, 3, 4, 5 or 6. In some embodiments, the peptide linker comprises the amino acid sequence shown in SEQ ID NO:32 or 33.
在一些实施方案中,所述PVRIG结合蛋白包含SEQ ID NO:36-40任一项所示的氨基酸序列,或与SEQ ID NO:36-40任一项所示的氨基酸序列相比具有至少80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%同一性的氨基酸序列,或与SEQ ID NO:36-40任一项所示的氨基酸序列相比具有一个或多个保守氨基酸取代的氨基酸序列。In some embodiments, the PVRIG binding protein comprises the amino acid sequence shown in any one of SEQ ID NOs:36-40, or an amino acid sequence having at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the amino acid sequence shown in any one of SEQ ID NOs:36-40, or an amino acid sequence having one or more conservative amino acid substitutions with the amino acid sequence shown in any one of SEQ ID NOs:36-40.
在一些实施方案中,所述PVRIG结合蛋白包含SEQ ID NO:36-40任一项所示的氨基酸序列。In some embodiments, the PVRIG binding protein comprises the amino acid sequence shown in any one of SEQ ID NO:36-40.
本发明示例性的氨基酸序列如表1所示。The exemplary amino acid sequences of the present invention are shown in Table 1.
表1氨基酸序列
Table 1 Amino acid sequence
另一方面,本发明提供了一种核酸,所述核酸编码上述的双特异性抗体或抗原结合片段或PVRIG结合蛋白或其一部分。在一些实施方案中,所述核酸为分离的核酸。In another aspect, the present invention provides a nucleic acid encoding the above-mentioned bispecific antibody or antigen-binding fragment or PVRIG binding protein or a portion thereof. In some embodiments, the nucleic acid is an isolated nucleic acid.
本发明示例性的核酸序列如表2所示。The exemplary nucleic acid sequences of the present invention are shown in Table 2.
表2核酸序列
Table 2 Nucleotide sequences
另一方面,本发明提供了一种表达载体,所述表达载体包含上述的核酸。In another aspect, the present invention provides an expression vector comprising the above-mentioned nucleic acid.
另一方面,本发明提供了一种宿主细胞,所述细胞包含上述的核酸,或上述的表达载体。在一些实施方案中,所述宿主细胞为分离的宿主细胞。在一些实施方案中,所述细胞为CHO细胞、HEK细胞(如HEK293F细胞)、BHK细胞、Cos1细胞、Cos7细胞、CV1细胞或鼠L细胞。On the other hand, the present invention provides a host cell comprising the above-mentioned nucleic acid, or the above-mentioned expression vector. In some embodiments, the host cell is an isolated host cell. In some embodiments, the cell is a CHO cell, a HEK cell (such as a HEK293F cell), a BHK cell, a Cos1 cell, a Cos7 cell, a CV1 cell or a mouse L cell.
另一方面,本发明提供了制备本文所述的双特异性抗体或抗原结合片段或PVRIG结合蛋白的方法,包含在培养基中培养上述宿主细胞以产生双特异性抗体或抗原结合片段或PVRIG结合蛋白。在一些实施方案中,所述方法还包括从所述宿主细胞或所述培养基回收所述双特异性抗体或抗原结合片段或PVRIG结合蛋白。In another aspect, the present invention provides a method for preparing the bispecific antibody or antigen-binding fragment or PVRIG-binding protein described herein, comprising culturing the above-mentioned host cell in a culture medium to produce the bispecific antibody or antigen-binding fragment or PVRIG-binding protein. In some embodiments, the method further comprises recovering the bispecific antibody or antigen-binding fragment or PVRIG-binding protein from the host cell or the culture medium.
另一方面,本发明提供了一种药物组合物,所述药物组合物包含上述的双特异性抗体或抗原结合片段、上述的PVRIG结合蛋白、上述的核酸,上述的表达载体或上述的细胞,以及药学上可接受的辅料。On the other hand, the present invention provides a pharmaceutical composition, comprising the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector or the above-mentioned cell, and a pharmaceutically acceptable excipient.
另一方面,本发明提供了上述的双特异性抗体或抗原结合片段、上述的PVRIG结合蛋白、上述的核酸、上述的表达载体、上述的细胞或上述的药物组合物在治疗或预防疾病中的用途。On the other hand, the present invention provides use of the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector, the above-mentioned cell or the above-mentioned pharmaceutical composition in treating or preventing a disease.
另一方面,本发明提供了上述的双特异性抗体或抗原结合片段、上述的PVRIG结合蛋白、上述的核酸、上述的表达载体、上述的细胞或上述的药物组合物在制备治疗或预防疾病的药物中的用途。On the other hand, the present invention provides use of the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector, the above-mentioned cell or the above-mentioned pharmaceutical composition in the preparation of a drug for treating or preventing a disease.
另一方面,本发明提供了一种治疗或预防疾病的方法,包括向有需要的患者施用治疗有效量的上述的双特异性抗体或抗原结合片段、上述的PVRIG结合蛋白、上述的核酸、上述的表达载体、上述的细胞或上述的药物组合物。On the other hand, the present invention provides a method for treating or preventing a disease, comprising administering a therapeutically effective amount of the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector, the above-mentioned cell or the above-mentioned pharmaceutical composition to a patient in need thereof.
在一些实施方案中,所述疾病为增殖性疾病或感染。在一些实施方案中,所述疾病为肿瘤。在一些实施方案中,所述肿瘤为良性肿瘤或癌症。在一些实施方案中,所述肿瘤选自前列腺癌、肝癌、结直肠癌、卵巢癌、子宫癌(如子宫内膜癌)、乳腺癌(如三阴性乳腺癌)、胰腺癌、胃癌、宫颈癌、头颈癌、甲状腺癌、睾丸癌、膀胱癌、尿路上皮癌、肺癌(如小细胞肺癌和非小细胞肺癌)、黑色素瘤、非黑素瘤皮肤癌(如鳞状和基底细胞癌)、神经胶质瘤、肾癌、淋巴瘤(如非霍奇金淋巴瘤,例如弥漫性大B细胞淋巴瘤;霍奇金淋巴瘤)、白血病(如急性骨髓性白血病、T细胞急性淋巴母细胞性白血病)、睾丸生殖细胞肿瘤、间皮瘤、食管癌、默克细胞癌、高MSI癌、KRAS突变肿瘤、成人T细胞白血病/淋巴瘤、骨髓增生异常综合征、尿道癌、鳞状细胞癌和梅克尔细胞癌。在一些实施方案中,所述感染选自病毒感染、细菌感染、真菌感染和寄生虫感染。In some embodiments, the disease is a proliferative disease or an infection. In some embodiments, the disease is a tumor. In some embodiments, the tumor is a benign tumor or a cancer. In some embodiments, the tumor is selected from prostate cancer, liver cancer, colorectal cancer, ovarian cancer, uterine cancer (such as endometrial cancer), breast cancer (such as triple negative breast cancer), pancreatic cancer, gastric cancer, cervical cancer, head and neck cancer, thyroid cancer, testicular cancer, bladder cancer, urothelial cancer, lung cancer (such as small cell lung cancer and non-small cell lung cancer), melanoma, non-melanoma skin cancer (such as squamous and basal cell carcinoma), glioma, kidney cancer, lymphoma (such as non-Hodgkin lymphoma, e.g., diffuse large B-cell lymphoma; Hodgkin lymphoma), leukemia (such as acute myeloid leukemia, T-cell acute lymphoblastic leukemia), testicular germ cell tumor, mesothelioma, esophageal cancer, Merkel cell carcinoma, high MSI cancer, KRAS mutant tumors, adult T-cell leukemia/lymphoma, myelodysplastic syndrome, urethral cancer, squamous cell carcinoma and Merkel cell carcinoma. In some embodiments, the infection is selected from viral infection, bacterial infection, fungal infection and parasitic infection.
在一些实施方案中,本发明涉及试剂盒或制品,其包含上述的双特异性抗体或抗原结合片段、上述的PVRIG结合蛋白、上述的核酸、上述的表达载体、上述的细胞或上述的药物组合物。In some embodiments, the present invention relates to a kit or a product comprising the above-mentioned bispecific antibody or antigen-binding fragment, the above-mentioned PVRIG binding protein, the above-mentioned nucleic acid, the above-mentioned expression vector, the above-mentioned cell or the above-mentioned pharmaceutical composition.
本发明PVRIG结合蛋白或双特异性抗体或抗原结合片段可以用于治疗或预防各种疾病,比如肿瘤或感染,也可以用于相关疾病的诊断和预后。The PVRIG binding protein or bispecific antibody or antigen-binding fragment of the present invention can be used to treat or prevent various diseases, such as tumors or infections, and can also be used for the diagnosis and prognosis of related diseases.
图1示例本发明双特异性抗体的2种结构;图1A为双特异性抗体Bi-VH1的结构,图1B为双特异性抗体Bi-VH3的结构。FIG1 illustrates two structures of the bispecific antibodies of the present invention; FIG1A is the structure of the bispecific antibody Bi-VH1, and FIG1B is the structure of the bispecific antibody Bi-VH3.
图2为抗体与过表达TIGIT的细胞的结合曲线。FIG2 is a binding curve of the antibody to cells overexpressing TIGIT.
图3为抗体或VHH-Fc融合蛋白和过表达PVRIG的细胞的结合曲线。FIG3 shows the binding curves of antibodies or VHH-Fc fusion proteins and cells overexpressing PVRIG.
图4为抗体或融合蛋白和过表达PVRIG的细胞的结合曲线。FIG4 shows the binding curves of antibodies or fusion proteins and cells overexpressing PVRIG.
图5为抗体或VHH-Fc融合蛋白阻断配体PVRL2与细胞表面PVRIG的结合曲线。FIG5 is a graph showing the binding curve of antibody or VHH-Fc fusion protein blocking the binding of ligand PVRL2 to cell surface PVRIG.
图6展示抗体或VHH-Fc融合蛋白阻断PVRL2-PVRIG相互作用的细胞活性。FIG6 shows that antibodies or VHH-Fc fusion proteins block the cellular activity of PVRL2-PVRIG interaction.
图7展示抗体或VHH-Fc融合蛋白阻断PVRL2-PVRIG相互作用的细胞活性。FIG. 7 shows that antibodies or VHH-Fc fusion proteins block the cellular activity of PVRL2-PVRIG interaction.
图8展示抗体阻断PVR-TIGIT相互作用的细胞活性。FIG8 shows cellular activity of antibodies blocking PVR-TIGIT interaction.
图9展示抗体或融合蛋白激活NK细胞的活性。FIG. 9 shows the activity of antibodies or fusion proteins in activating NK cells.
除非另有定义,本文使用的所有技术和科学术语具有与本发明所属领域的普通技术人员通常理解的相同含义。Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs.
术语the term
应当注意的是,术语“一种”实体是指一种或多种该实体,例如“一种抗体”应当被理解为一种或多种抗体,因此,术语“一种”(或“一个”)、“一种或多种”和“至少一种”可以在本文中互换使用。It should be noted that the term "a" entity refers to one or more of that entity, e.g., "an antibody" should be understood as one or more antibodies, and thus, the terms "a" (or "an"), "one or more" and "at least one" can be used interchangeably herein.
“约”指相关技术领域技术人员容易知道的相应数值的常规误差范围。在一些实施方式中,本文中提到“约”指所描述的数值以及其±10%、±5%或±1%的范围。"About" refers to the normal error range of the corresponding numerical value that is easily known to those skilled in the relevant technical field. In some embodiments, "about" mentioned herein refers to the described numerical value and its ±10%, ±5% or ±1% range.
本文所用的术语“包含”或“包括”意味着抗体、组合物或方法等包括所列举的元素,例如组份或步骤,但不排除其它。“基本上由……组成”意味着抗体、组合物或方法等排除对组合的特征有根本影响的其它元素,但不排除对抗体、组合物或方法等无本质上影响的元素。“由……组成”意味着排除未特别列举的元素。As used herein, the terms "comprising" or "including" mean that the antibody, composition, method, etc. include the listed elements, such as components or steps, but do not exclude others. "Essentially consisting of" means that the antibody, composition, method, etc. exclude other elements that have a fundamental effect on the characteristics of the combination, but do not exclude elements that have no essential effect on the antibody, composition, method, etc. "Consisting of" means excluding elements not specifically listed.
“多肽”旨在涵盖单数的“多肽”以及复数的“多肽”,并且是指由通过酰胺键(也称为肽键)线性连接的氨基酸单体构成的分子。“多肽”是指两个或更多个氨基酸的任何单条链或多条链,并且不涉及产物的特定长度。因此,“多肽”的定义中包括肽、二肽、三肽、寡肽、“蛋白质”、“氨基酸链”或用于指两个或多个氨基酸链的任何其他术语,并且“多肽”可以用来代替上述任何一个术语,或者与上述任何一个术语交替使用。“多肽”也意在指多肽表达后修饰的产物,包括但不限于糖基化、乙酰化、磷酸化、酰胺化、通过已知的保护/封闭基团衍生化、蛋白水解切割或非天然发生的氨基酸修饰。多肽可以源自天然生物来源或通过重组技术产生,但其不必从指定的核酸序列翻译所得,它可能以包括化学合成的任何方式产生。"Polypeptide" is intended to encompass the singular "polypeptide" as well as the plural "polypeptides", and refers to a molecule composed of amino acid monomers linearly linked by amide bonds (also known as peptide bonds). "Polypeptide" refers to any single chain or multiple chains of two or more amino acids, and does not refer to the specific length of the product. Therefore, the definition of "polypeptide" includes peptides, dipeptides, tripeptides, oligopeptides, "proteins", "amino acid chains" or any other terms used to refer to two or more amino acid chains, and "polypeptide" can be used to replace any of the above terms, or used interchangeably with any of the above terms. "Polypeptide" is also intended to refer to products modified after the expression of the polypeptide, including but not limited to glycosylation, acetylation, phosphorylation, amidation, derivatization by known protecting/blocking groups, proteolytic cleavage or non-natural amino acid modifications. The polypeptide can be derived from a natural biological source or produced by recombinant technology, but it is not necessarily translated from a specified nucleic acid sequence, and it may be produced in any manner including chemical synthesis.
本领域普通技术人员可以理解,抗体的CDR区负责抗体对抗原的结合特异性。在已知抗体重链和轻链可变区序列的情况下,目前有几种确定抗体CDR区的方法,包括Kabat、IMGT、Chothia和AbM编号系统。然而,每种关于抗体或其变体的CDR的定义的应用都将在本文定义和使用的术语的范围内。如果给定该抗体的可变区氨基酸序列,则本领域技术人员通常可确定哪些残基包含在特定CDR中,而不依赖于该序列自身之外的任何实验数据。Those of ordinary skill in the art will appreciate that the CDR region of an antibody is responsible for the binding specificity of the antibody to an antigen. In the case of known antibody heavy chain and light chain variable region sequences, there are currently several methods for determining the CDR region of an antibody, including Kabat, IMGT, Chothia and AbM numbering systems. However, the application of the definition of the CDR of an antibody or its variant will be within the scope of the term defined and used herein. If the variable region amino acid sequence of the given antibody is given, then those skilled in the art can determine which residues are included in a specific CDR usually, without relying on any experimental data outside the sequence itself.
“抗体”、“抗原结合片段”是指特异性识别和结合抗原的多肽或多肽复合物。抗体可以是完整的抗体及其任何抗原结合片段或其单链。因此“抗体”包括分子中含有具有与抗原结合的生物学活性的免疫球蛋白分子的至少一部分的任何蛋白质或肽。抗体和抗原结合片段包括但不局限重链或轻链或其配体结合部分的互补决定区(CDR)、重链可变区(VH)、轻链可变区(VL)、重链恒定区(CH)、轻链恒定区(CL)、框架区(FR)或其任何部分,或结合蛋白的至少一部分。CDR区包括轻链的CDR区(LCDR1-3)和重链的CDR区(HCDR1-3)。重链恒定区(CH)包括CH1结构域、铰链(例如上、中和/或下铰链区)结构域、CH2结构域、CH3结构域;可结晶段(Fc片段)相当于CH2和CH3结构域。抗体及抗原结合片段可以特异性识别和结合一个或多个(如两个)抗原的多肽或多肽复合物。特异性识别和结合多个(如两个)抗原的抗体或抗原结合片段可以被称为多特异性(如双特异性)抗体或抗原结合片段。"Antibody", "antigen-binding fragment" refers to a polypeptide or polypeptide complex that specifically recognizes and binds to an antigen. An antibody can be a complete antibody and any antigen-binding fragment thereof or a single chain thereof. Therefore, "antibody" includes any protein or peptide that contains at least a portion of an immunoglobulin molecule that has biological activity of binding to an antigen. Antibodies and antigen-binding fragments include but are not limited to the complementarity determining region (CDR) of a heavy chain or light chain or its ligand-binding portion, a heavy chain variable region (VH), a light chain variable region (VL), a heavy chain constant region (CH), a light chain constant region (CL), a framework region (FR) or any portion thereof, or at least a portion of a binding protein. The CDR region includes the CDR region (LCDR1-3) of the light chain and the CDR region (HCDR1-3) of the heavy chain. The heavy chain constant region (CH) includes the CH1 domain, the hinge (e.g., the upper, middle and/or lower hinge region) domain, the CH2 domain, and the CH3 domain; the crystallizable segment (Fc fragment) is equivalent to the CH2 and CH3 domains. Antibodies and antigen-binding fragments can specifically recognize and bind to polypeptides or polypeptide complexes of one or more (such as two) antigens. Antibodies or antigen-binding fragments that specifically recognize and bind to multiple (such as two) antigens can be referred to as multispecific (such as bispecific) antibodies or antigen-binding fragments.
完整的抗体包括重链或/和轻链。重链的类别包括gamma、mu、alpha、delta或epsilon(γ、μ、α、δ、ε),其中还有一些亚类(例如γ1-γ4)。该链的性质决定了抗体的“种类”分别为IgG、IgM、IgA、IgD或IgE。抗体亚类(同种型),例如IgG1、IgG2、IgG3、IgG4等已被充分表征并且赋予的功能特异性也已知。所有的抗体种类都在本发明的保护范围内。在一些实施方案中,抗体包括两条重链或和两条轻链,这四条链通过二硫键以“Y”构型连接,其中轻链从“Y”口开始并延续通过可变区包围重链。A complete antibody includes a heavy chain and/or a light chain. The categories of heavy chains include gamma, mu, alpha, delta or epsilon (γ, μ, α, δ, ε), among which there are some subclasses (e.g., γ1-γ4). The nature of the chain determines the "type" of the antibody, which is IgG, IgM, IgA, IgD or IgE, respectively. Antibody subclasses (isotypes), such as IgG1, IgG2, IgG3, IgG4, etc., have been fully characterized and the functional specificity conferred is also known. All antibody types are within the scope of protection of the present invention. In some embodiments, the antibody includes two heavy chains or and two light chains, and these four chains are connected in a "Y" configuration by disulfide bonds, wherein the light chain starts from the "Y" mouth and continues through the variable region to surround the heavy chain.
“抗体片段”或“抗原结合片段”指抗体的一部分,例如F(ab’)2、F(ab)2、Fab'、Fab、Fv、scFv等。不管其结构如何,抗体片段与被完整抗体识别的同一抗原结合。“抗体片段”包括适体、镜像异构体和双价抗体。“抗原结合片段”还包括通过与特定抗原结合形成复合物起抗体作用的任何合成或基因工程蛋白质。"Antibody fragment" or "antigen-binding fragment" refers to a portion of an antibody, such as F(ab')2, F(ab)2, Fab', Fab, Fv, scFv, etc. Regardless of its structure, an antibody fragment binds to the same antigen recognized by the intact antibody. "Antibody fragments" include aptamers, spiegelmers, and bivalent antibodies. "Antigen-binding fragment" also includes any synthetic or genetically engineered protein that acts as an antibody by binding to a specific antigen to form a complex.
“Fab”通常指常规抗体(例如IgG)中与抗原结合的部分,包括抗体的重链可变区VH、轻链可变区VL和重链恒定区结构域CH1以及轻链恒定区CL。在常规抗体中,VH的C端与CH1的N端联结形成重链Fd片段,VL的C端与CL的N端联结形成轻链,CH1的C端又进一步与重链的铰链区和其他恒定区结构域联结形成重链。在一些实施例中,“Fab”也指Fab的变体结构。例如,在某些实施例中,VH的C端与CL的N端联结形成一个多肽链,VL的C端与CH1的N端联结形成另一个多肽链,形成Fab(cross VH/VL)的结构;在某些实施例中,Fab的CH1不与铰链区联结,而是CL的C端与重链的铰链区联结,形成Fab(cross Fd/LC)的结构。"Fab" generally refers to the part of a conventional antibody (such as IgG) that binds to an antigen, including the heavy chain variable region VH, light chain variable region VL, heavy chain constant region domain CH1, and light chain constant region CL of the antibody. In conventional antibodies, the C-terminus of VH is linked to the N-terminus of CH1 to form a heavy chain Fd fragment, the C-terminus of VL is linked to the N-terminus of CL to form a light chain, and the C-terminus of CH1 is further linked to the hinge region and other constant region domains of the heavy chain to form a heavy chain. In some embodiments, "Fab" also refers to a variant structure of Fab. For example, in some embodiments, the C-terminus of VH is linked to the N-terminus of CL to form a polypeptide chain, and the C-terminus of VL is linked to the N-terminus of CH1 to form another polypeptide chain, forming a Fab (cross VH/VL) structure; in some embodiments, the CH1 of Fab is not linked to the hinge region, but the C-terminus of CL is linked to the hinge region of the heavy chain, forming a Fab (cross Fd/LC) structure.
“单链抗体”、“单链可变片段”或“scFv”是指免疫球蛋白的重链可变区(VH)和轻链可变区(VL)的融合蛋白。在一些方面,这些区域与10个至约25个氨基酸的肽接头连接。肽接头可以富含甘氨酸以增加柔韧性,以及富含丝氨酸或苏氨酸以增加溶解性,并且可以连接VH的N端和VL的C端,反之亦然。尽管该蛋白质被除去了恒定区和引入了接头,但其保留了原始免疫球蛋白的特异性。scFv分子通常是本领域中已知的,例如在美国专利5,892,019中有相关描述。"Single-chain antibody", "single-chain variable fragment" or "scFv" refers to a fusion protein of the heavy chain variable region (VH) and the light chain variable region (VL) of an immunoglobulin. In some aspects, these regions are connected to a peptide linker of 10 to about 25 amino acids. The peptide linker can be rich in glycine to increase flexibility, as well as rich in serine or threonine to increase solubility, and can connect the N-terminus of VH and the C-terminus of VL, or vice versa. Although the protein has been stripped of the constant region and a linker has been introduced, it retains the specificity of the original immunoglobulin. ScFv molecules are generally known in the art, for example, as described in U.S. Patent No. 5,892,019.
“单域抗体”或“sdAb”是指只包含单一抗体可变区的抗原结合片段。单独的sdAb能够与抗原结合,但不需与相应的含CDR多肽配对。重链可变区在本文中也可称为“VHH”。一些VHH也被称为纳米抗体。VHH从N端至C端具有以下结构:FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4。在本文中,可与PVRIG结合的VHH可被称为抗PVRIG的VHH片段。"Single domain antibody" or "sdAb" refers to an antigen binding fragment that contains only a single antibody variable region. A single sdAb is able to bind to an antigen without being paired with a corresponding CDR-containing polypeptide. The heavy chain variable region may also be referred to as a "VHH" herein. Some VHHs are also referred to as nanobodies. VHHs have the following structure from N-terminus to C-terminus: FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4. In this article, a VHH that can bind to PVRIG may be referred to as an anti-PVRIG VHH fragment.
“双特异性抗体”指具有两个抗原结合位点的抗体,所述两个抗原结合位点可以是相同抗原的不同表位,也可以是不同抗原的不同表位。"Bispecific antibody" refers to an antibody that has two antigen-binding sites, which may be different epitopes of the same antigen or different epitopes of different antigens.
“同源性”或“同一性”是指两个肽之间或两个核酸之间的序列相似性。可以通过比较每个序列中可以比对的位置来确定同源性或同一性。当被比较的序列中的位置被相同的碱基或氨基酸占据时,则分子在该位置是同源的或同一的。序列之间的同源程度是由序列共有的匹配或同源位置的数目组成的一个函数。"Homology" or "identity" refers to the sequence similarity between two peptides or between two nucleic acids. Homology or identity can be determined by comparing the positions in each sequence that can be aligned. When a position in the compared sequences is occupied by the same base or amino acid, then the molecules are homologous or identical at that position. The degree of homology between sequences is a function of the number of matching or homologous positions shared by the sequences.
“多聚核苷酸”和“核酸”可互换使用。核酸或多聚核苷酸(或多肽或抗体序列)与另一序列有具有一定百分比(例如90%、95%、98%或者99%)的“同一性或序列同一性”是指当序列比对时,所比较的两个序列中该百分比的碱基(或氨基酸)相同。可以使用目测或本领域已知的软件程序来确定该比对和同一性百分比或序列同一性,比如Ausubel et al.eds.(2007)在Current Protocols in Molecular Biology中所述的软件程序。优选使用默认参数进行比对。其中一种比对程序是使用默认参数的BLAST,例如BLASTN和BLASTP,两者使用下列默认参数:Geneticcode=standard;filter=none;strand=both;cutoff=60;expect=10;Matrix=BLOSUM62;Descriptions=50sequences;sortby=HIGHSCORE;Databases=non-redundant;GenBank+EMBL+DDBJ+PDB+GenBankCDStranslations+SwissProtein+SPupdate+PIR。生物学上等同的多聚核苷酸是具有上述指定百分比的同一性并编码具有相同或相似生物学活性的多肽的多聚核苷酸。"Polynucleotide" and "nucleic acid" are used interchangeably. A nucleic acid or polynucleotide (or polypeptide or antibody sequence) having a certain percentage (e.g., 90%, 95%, 98% or 99%) of "identity or sequence identity" with another sequence means that when the sequences are aligned, that percentage of bases (or amino acids) in the two sequences being compared are the same. The alignment and the identity percentage or sequence identity can be determined visually or using software programs known in the art, such as the software programs described in Ausubel et al. eds. (2007) in Current Protocols in Molecular Biology. Preferably, the alignment is performed using the default parameters. One such alignment program is BLAST using default parameters, such as BLASTN and BLASTP, both using the following default parameters: Geneticcode=standard; filter=none; strand=both; cutoff=60; expect=10; Matrix=BLOSUM62; Descriptions=50 sequences; sortby=HIGHSCORE; Databases=non-redundant; GenBank+EMBL+DDBJ+PDB+GenBankCDStranslations+SwissProtein+SPupdate+PIR. Biologically equivalent polynucleotides are polynucleotides that have the above specified percentage identities and encode polypeptides having the same or similar biological activity.
“保守氨基酸取代”是其中氨基酸残基被具有类似侧链的氨基酸残基取代。具有类似侧链的氨基酸残基家族已在本领域中定义,其包括碱性侧链(例如赖氨酸、精氨酸、组氨酸),酸性侧链(例如天冬氨酸,谷氨酸),不带电荷的极性侧链(例如,甘氨酸、天冬酰胺、谷氨酰胺、丝氨酸、苏氨酸、酪氨酸、半胱氨酸),非极性侧链(例如,丙氨酸、缬氨酸、亮氨酸、异亮氨酸、脯氨酸、苯丙氨酸、蛋氨酸、色氨酸),β-支链的侧链(例如,苏氨酸、缬氨酸、异亮氨酸)和芳族侧链(例如酪氨酸、苯丙氨酸、色氨酸、组氨酸)。因此,免疫球蛋白多肽的非必需氨基酸残基优选被来自相同侧链家族的其他氨基酸残基取代。在另一些实施方案中,一串氨基酸可被结构上类似的氨基酸串取代,后者在顺序上和/或侧链家族的组成上不同。"Conservative amino acid substitutions" are those in which an amino acid residue is replaced by an amino acid residue with a similar side chain. Families of amino acid residues with similar side chains have been defined in the art and include basic side chains (e.g., lysine, arginine, histidine), acidic side chains (e.g., aspartic acid, glutamic acid), uncharged polar side chains (e.g., glycine, asparagine, glutamine, serine, threonine, tyrosine, cysteine), non-polar side chains (e.g., alanine, valine, leucine, isoleucine, proline, phenylalanine, methionine, tryptophan), beta-branched side chains (e.g., threonine, valine, isoleucine) and aromatic side chains (e.g., tyrosine, phenylalanine, tryptophan, histidine). Therefore, non-essential amino acid residues of immunoglobulin polypeptides are preferably replaced by other amino acid residues from the same side chain family. In other embodiments, a string of amino acids may be replaced by a structurally similar string of amino acids that differ in sequence and/or in the composition of the side chain family.
在一些实施方案中,所述保守氨基酸取代优选地是这样的取代,即,其中下列组(a)–(e)内的一个氨基酸被同组内的另一氨基酸残基取代:(a)小的脂肪族、非极性或弱极性的残基:Ala,Ser,Thr,Pro和Gly;(b)极性、带负电荷的残基及其(不带电荷的)酰胺:Asp,Asn,Glu和Gln;(c)极性、带正电荷的残基:His,Arg和Lys;(d)大的脂肪族、非极性残基:Met,Leu,Ile,Val和Cys;以及(e)芳族残基:Phe,Tyr和Trp。In some embodiments, the conservative amino acid substitution is preferably a substitution in which an amino acid within the following groups (a)-(e) is substituted by another amino acid residue within the same group: (a) small aliphatic, non-polar or weakly polar residues: Ala, Ser, Thr, Pro and Gly; (b) polar, negatively charged residues and their (uncharged) amides: Asp, Asn, Glu and Gln; (c) polar, positively charged residues: His, Arg and Lys; (d) large aliphatic, non-polar residues: Met, Leu, Ile, Val and Cys; and (e) aromatic residues: Phe, Tyr and Trp.
特别优选的保守氨基酸取代如下:Ala由Gly或Ser取代;Arg由Lys取代;Asn由Gln或His取代;Asp由Glu取代;Cys由Ser取代;Gln由Asn取代;Glu由Asp取代;Gly由Ala或Pro取代;His由Asn或Gln取代;Ile由Leu或Val取代;Leu由Ile或Val取代;Lys由Arg,Gln或Glu取代;Met由Leu,Tyr或Ile取代;Phe由Met,Leu或Tyr取代;Ser由Thr取代;Thr由Ser取代;Trp由Tyr取代;Tyr由Trp取代;和/或Phe由Val,Ile或Leu取代。Particularly preferred conservative amino acid substitutions are as follows: Ala is replaced by Gly or Ser; Arg is replaced by Lys; Asn is replaced by Gln or His; Asp is replaced by Glu; Cys is replaced by Ser; Gln is replaced by Asn; Glu is replaced by Asp; Gly is replaced by Ala or Pro; His is replaced by Asn or Gln; Ile is replaced by Leu or Val; Leu is replaced by Ile or Val; Lys is replaced by Arg, Gln or Glu; Met is replaced by Leu, Tyr or Ile; Phe is replaced by Met, Leu or Tyr; Ser is replaced by Thr; Thr is replaced by Ser; Trp is replaced by Tyr; Tyr is replaced by Trp; and/or Phe is replaced by Val, Ile or Leu.
本发明提供的PVRIG结合蛋白或双特异性抗体包括被修饰的衍生物,即通过任何类型的分子与PVRIG结合蛋白或双特异性抗体的共价连接进行修饰,其中共价连接不会阻止PVRIG结合蛋白或双特异性抗体与表位结合。PVRIG结合蛋白或双特异性抗体可以被糖基化、乙酰化、聚乙二醇化、磷酸化、酰胺化、通过已知的保护/封闭基团衍生化、蛋白水解切割、连接至细胞配体或其他蛋白质等等。众多化学修饰中的任一种修饰可以通过现有技术进行,包括但不限于特异性化学裂解、乙酰化、甲酰化、衣霉素的代谢合成等。The PVRIG binding proteins or bispecific antibodies provided by the present invention include modified derivatives, i.e., modified by covalent attachment of any type of molecule to the PVRIG binding protein or bispecific antibody, wherein the covalent attachment does not prevent the PVRIG binding protein or bispecific antibody from binding to the epitope. The PVRIG binding protein or bispecific antibody can be glycosylated, acetylated, pegylated, phosphorylated, amidated, derivatized by known protecting/blocking groups, proteolytically cleaved, linked to cellular ligands or other proteins, etc. Any of the numerous chemical modifications can be performed by existing techniques, including but not limited to specific chemical cleavage, acetylation, formylation, metabolic synthesis of tunicamycin, etc.
在一些实施方案中,PVRIG结合蛋白或双特异性抗体可以与治疗剂、药物前体、肽、蛋白质、酶、病毒、脂类、生物反应调节剂、药剂或PEG缀合。In some embodiments, the PVRIG binding protein or bispecific antibody can be conjugated to a therapeutic agent, a prodrug, a peptide, a protein, an enzyme, a virus, a lipid, a biological response modifier, a pharmaceutical agent, or PEG.
“药学上可接受的”是指由政府的监管机构批准的或公认药典中列出的用于动物,特别是用于人类的物质。此外,“药学上可接受的辅料”通常指是任何类型的无毒固体、半固体或液体填充剂、稀释剂、包封材料或制剂助剂等。"Pharmaceutically acceptable" refers to substances approved by government regulatory agencies or listed in recognized pharmacopoeias for use in animals, especially in humans. In addition, "pharmaceutically acceptable excipients" generally refer to any type of non-toxic solid, semi-solid or liquid filler, diluent, encapsulating material or formulation aid, etc.
“辅料”是指可以与活性成分一起施用于患者的稀释剂、佐剂、赋形剂或载体。此类药物载体可以是无菌液体,如水和油,包括石油、动植物或合成来源的油,如花生油、大豆油、矿物油、芝麻油等。当药物组合物静脉内给药时,水是优选的载体。盐水溶液和葡萄糖水溶液和甘油溶液也可用作液体载体,特别是用于注射溶液。合适的药物赋形剂包括淀粉、葡萄糖、乳糖、明胶、麦芽、大米、面粉、白垩、硅胶、硬脂酸钠、单硬脂酸甘油酯、滑石、脱脂奶粉、甘油、丙烯、乙二醇、水、乙醇等。如有需要,组合物还可以含有少量的润湿剂或乳化剂,或pH缓冲剂。抗菌剂如苯甲醇或对羟基苯甲酸甲酯、抗氧化剂如抗坏血酸、螯合剂,以及调节张力的试剂如右旋葡萄糖也是可以预见的。这些组合物可以采取溶液、悬液、乳剂、片剂、丸剂、胶囊、散剂、缓释制剂等形式。该组合物可以用传统的粘合剂和载体如甘油三酯配制成栓剂。口服制剂可以包括标准载体,例如药物等级的甘露糖醇、乳糖、淀粉、硬脂酸镁、糖精钠、纤维素、碳酸镁等。此类组合物将含有临床有效剂量的抗体或抗原结合片段或融合蛋白,优选以纯化后的形式,连同合适数量的辅料,以提供适合于患者的给药形式。该制剂应该适用于给药模式。亲本制剂可以封装在安瓿瓶、一次性注射器或由玻璃或塑料制成的多剂量小瓶中。"Excipient" refers to a diluent, adjuvant, excipient or carrier that can be applied to a patient together with the active ingredient. Such pharmaceutical carriers can be sterile liquids, such as water and oils, including oils of petroleum, animal, plant or synthetic origin, such as peanut oil, soybean oil, mineral oil, sesame oil, etc. When the pharmaceutical composition is administered intravenously, water is a preferred carrier. Saline solutions and aqueous glucose solutions and glycerol solutions can also be used as liquid carriers, particularly for injection solutions. Suitable pharmaceutical excipients include starch, glucose, lactose, gelatin, malt, rice, flour, chalk, silica gel, sodium stearate, glyceryl monostearate, talc, skim milk powder, glycerol, propylene, ethylene glycol, water, ethanol, etc. If necessary, the composition can also contain a small amount of wetting agent or emulsifier, or pH buffer. Antibacterial agents such as benzyl alcohol or methyl parahydroxybenzoate, antioxidants such as ascorbic acid, chelating agents, and agents for regulating tension such as dextrose are also foreseeable. These compositions can take the form of solution, suspension, emulsion, tablet, pill, capsule, powder, sustained release formulations, etc. The composition can be formulated into suppositories with traditional adhesives and carriers such as triglycerides. Oral formulations can include standard carriers, such as pharmaceutical grade mannitol, lactose, starch, magnesium stearate, sodium saccharin, cellulose, magnesium carbonate, etc. Such compositions will contain clinically effective doses of antibodies or antigen binding fragments or fusion proteins, preferably in purified form, together with an appropriate amount of adjuvants, to provide a dosage form suitable for the patient. The preparation should be suitable for administration mode. The parent preparation can be packaged in an ampoule, a disposable syringe, or a multi-dose vial made of glass or plastic.
本发明的PVRIG结合蛋白或双特异性抗体(包括抗体、抗原结合片段或融合蛋白等)包括中性的或盐的形式。药学上可接受的盐包括但不限于与衍生自如盐酸、磷酸、乙酸、草酸、酒石酸等的阴离子形成的盐,以及与衍生自如钠、钾、铵、钙、氢氧化铁、异丙胺、三乙胺、2-乙氨基乙醇、组氨酸、普鲁卡因等的阳离子形成的盐。本文所述PVRIG结合蛋白或双特异性抗体可以为中性,即基本没有净电荷,如含PVRIG结合蛋白或双特异性抗体的组合物pH为蛋白等电点时蛋白为电中性。本文所述蛋白可以以正离子形式存在,如当pH在等电点以下,蛋白分子整体上显示正电荷。本文所述蛋白可以以负离子形式存在,如当pH在等电点以上,蛋白分子整体上显示负电荷。The PVRIG binding protein or bispecific antibody (including antibodies, antigen binding fragments or fusion proteins, etc.) of the present invention includes neutral or salt forms. Pharmaceutically acceptable salts include, but are not limited to, salts formed with anions derived from, for example, hydrochloric acid, phosphoric acid, acetic acid, oxalic acid, tartaric acid, and the like, and salts formed with cations derived from, for example, sodium, potassium, ammonium, calcium, iron hydroxide, isopropylamine, triethylamine, 2-ethylaminoethanol, histidine, procaine, and the like. The PVRIG binding protein or bispecific antibody described herein may be neutral, i.e., substantially free of net charge, such as when the pH of the composition containing the PVRIG binding protein or bispecific antibody is the isoelectric point of the protein, the protein is electrically neutral. The protein described herein may exist in the form of a positive ion, such as when the pH is below the isoelectric point, the protein molecule as a whole exhibits a positive charge. The protein described herein may exist in the form of a negative ion, such as when the pH is above the isoelectric point, the protein molecule as a whole exhibits a negative charge.
对于治疗特定患者的有效剂量和治疗方案将取决于各种因素,包括所使用的特定PVRIG结合蛋白或双特异性抗体或衍生物、患者的年龄和体重、一般健康状况、性别和饮食,以及给药时间、排泄频率、药物组合,以及所治疗的特定疾病的严重程度。由包括在本领域普通技术人员范围内的医疗护理人员对这些因素进行判断。所用剂量可以通过本领域熟知的药理学和药代动力学原理确定。在一些实施方案中,本发明PVRIG结合蛋白或双特异性抗体施用于患者的剂量为每次0.01mg/kg至100mg/kg患者体重。在一些实施方案中,每周、每两周、每三周或每四周给药一次。The effective dose and treatment regimen for treating a particular patient will depend on various factors, including the specific PVRIG binding protein or bispecific antibody or derivative used, the patient's age and weight, general health, sex and diet, as well as the time of administration, frequency of excretion, drug combination, and the severity of the specific disease being treated. These factors are determined by medical care personnel, including those of ordinary skill in the art. The dosage used can be determined by pharmacological and pharmacokinetic principles well known in the art. In some embodiments, the PVRIG binding protein or bispecific antibody of the present invention is administered to the patient at a dose of 0.01 mg/kg to 100 mg/kg of the patient's body weight each time. In some embodiments, the administration is once a week, every two weeks, every three weeks, or every four weeks.
本发明提供的抗体可以来源于任何动物,例如哺乳动物。较佳地,抗体是人源、鼠源、驴源、兔源、山羊源、骆驼源、美洲驼源、马源或鸡源抗体。在另一些实施方案中,可变区可以是软骨鱼纲(condricthoid)来源(例如来自鲨鱼)。The antibodies provided by the present invention can be derived from any animal, such as mammals. Preferably, the antibodies are human, mouse, donkey, rabbit, goat, camel, llama, horse or chicken antibodies. In other embodiments, the variable region can be of condricthoid origin (e.g., from sharks).
“治疗”是指治疗性治疗和预防性或防治性措施,其目的是预防、减缓、改善或停止不良的生理改变或紊乱,例如疾病的进程,包括但不限于以下无论是可检测还是不可检测的结果,症状的缓解、疾病程度的减小、疾病状态的稳定(即不恶化)、疾病进展的延迟或减缓、疾病状态的改善、缓和、减轻或消失(无论是部分还是全部)、延长与不接受治疗时预期的生存期限等。需要治疗的患者包括已经患有病症或紊乱的患者,容易患有病症或紊乱的患者,或者需要预防该病症或紊乱的患者,可以或预期从施用本发明提供的抗体或药物组合物用于检测、诊断过程和/或治疗中受益的患者。"Treatment" refers to therapeutic treatment and preventive or prophylactic measures, the purpose of which is to prevent, slow down, improve or stop undesirable physiological changes or disorders, such as the progression of a disease, including but not limited to the following results, whether detectable or undetectable, relief of symptoms, reduction in the extent of the disease, stabilization of the disease state (i.e., no worsening), delay or slowing of disease progression, improvement, alleviation, reduction or disappearance of the disease state (whether partial or complete), extension of the expected survival period compared to not receiving treatment, etc. Patients in need of treatment include patients who already have a disease or disorder, patients who are susceptible to a disease or disorder, or patients who need to prevent the disease or disorder, and patients who can or are expected to benefit from the administration of the antibodies or pharmaceutical compositions provided by the present invention for detection, diagnostic procedures and/or treatment.
“患者”指需要诊断、预防、预后或治疗的任何哺乳动物,包括人类、狗、猫、兔子、鼠、马、牛等。"Patient" refers to any mammal in need of diagnosis, prevention, prognosis or treatment, including humans, dogs, cats, rabbits, mice, horses, cows, etc.
抗体或融合蛋白的制备Preparation of antibodies or fusion proteins
本领域已知多种制备抗体或融合蛋白的方法,如杂交瘤技术、重组DNA技术、转基因小鼠技术及噬菌体展示文库等方法。Various methods for preparing antibodies or fusion proteins are known in the art, such as hybridoma technology, recombinant DNA technology, transgenic mouse technology, and phage display library methods.
抗体或融合蛋白可以通过使用常规重组DNA技术制备。使用本领域技术人员公知的技术可以选择、构建和培养生产抗体或融合蛋白的载体及细胞系等。这些技术在各种实验室手册和主要出版物中均有描述,例如Recombinant DNA Technology for Production of Protein Therapeutics in Cultured Mammalian Cells,D.L.Hacker,F.M.Wurm,in Reference Module in Life Sciences,2017,其全部内容包括补充内容通过引用并入本文。Antibodies or fusion proteins can be prepared using conventional recombinant DNA techniques. Vectors and cell lines that produce antibodies or fusion proteins can be selected, constructed and cultured using techniques known to those skilled in the art. These techniques are described in various laboratory manuals and major publications, such as Recombinant DNA Technology for Production of Protein Therapeutics in Cultured Mammalian Cells, D.L. Hacker, F.M. Wurm, in Reference Module in Life Sciences, 2017, the entire contents of which, including supplementary content, are incorporated herein by reference.
在一些实施方案中,可以按常规方法根据本文所述抗体或融合蛋白的氨基酸序列设计合成编码抗体或融合蛋白的DNA,将其置入表达载体中,然后转染宿主细胞,在培养基中培养被转染的宿主细胞产生单克隆抗体或融合蛋白。在一些实施方案中,表达载体包括至少一个启动子元件、蛋白编码序列、转录终止信号和polyA尾巴。其他元件包括增强子、Kozak序列及插入序列两侧RNA剪接的供体和受体位点。可以通过SV40的前期和后期启动子,来自逆转录病毒的长末端重复序列如RSV、HTLV1、HIVI及巨细胞病毒的早期启动子来获得高效的转录,也可应用其它一些细胞的启动子如肌动蛋白启动子。合适的表达载体可包括pIRES1neo、pRetro-Off、pRetro-On、pLXSN、pLNCX、pcDNA3.1(+/-)、pcDNA/Zeo(+/-)、pcDNA3.1/Hygro(+/-)、pSVL、pMSG、pRSVcat、pSV2dhfr、pBC12MI、pCS2和pCHO1.0等。常使用的哺乳动物宿主细胞包括HEK293细胞、Cos1细胞、Cos7细胞、CV1细胞、鼠L细胞和CHO细胞等。In some embodiments, the DNA encoding the antibody or fusion protein can be designed and synthesized according to the amino acid sequence of the antibody or fusion protein described herein in a conventional manner, placed in an expression vector, and then transfected into a host cell, and the transfected host cell is cultured in a culture medium to produce a monoclonal antibody or fusion protein. In some embodiments, the expression vector includes at least one promoter element, a protein coding sequence, a transcription termination signal, and a polyA tail. Other elements include enhancers, Kozak sequences, and donor and acceptor sites for RNA splicing on both sides of the insertion sequence. Efficient transcription can be obtained by the early and late promoters of SV40, the long terminal repeats from retroviruses such as RSV, HTLV1, HIVI, and the early promoters of cytomegalovirus, and promoters of other cells such as the actin promoter can also be used. Suitable expression vectors may include pIRES1neo, pRetro-Off, pRetro-On, pLXSN, pLNCX, pcDNA3.1 (+/-), pcDNA/Zeo (+/-), pcDNA3.1/Hygro (+/-), pSVL, pMSG, pRSVcat, pSV2dhfr, pBC12MI, pCS2, and pCHO1.0, etc. Commonly used mammalian host cells include HEK293 cells, Cos1 cells, Cos7 cells, CV1 cells, mouse L cells, and CHO cells, etc.
抗体或融合蛋白的基因序列可以通过标准方法(例如,连接基因序列和载体上的互补限制性位点,或者如果不存在限制性位点,则平端连接)插入表达载体内。在插入基因序列之前,表达载体可以已经携带抗体恒定区序列。例如,将抗体相关的VH和VL序列转换为全长抗体基因的一种方法是将它们分别插入已经编码重链恒定区和轻链恒定区的表达载体内,使得VH序列可操作地连接至载体内的CH序列,并且VL序列可操作地连接至载体内的CL序列。或者,重组表达载体可以编码促进宿主细胞分泌抗体或融合蛋白的信号肽。或者,可以将基因序列克隆到编码促进宿主细胞分泌抗体或融合蛋白的信号肽的载体中,使得编码信号肽的基因序列的3’端与编码抗体(重链和/或轻链)或融合蛋白的基因序列的5’端框内连接。信号肽可以是免疫球蛋白信号肽或异源信号肽(即,来自非免疫球蛋白的信号肽),例如,MEFGLSLVFLVLILKGVQC(SEQ ID NO:56)。The gene sequence of antibody or fusion protein can be inserted into expression vector by standard methods (for example, complementary restriction sites on connection gene sequence and carrier, or if restriction sites are not present, then flat end connection).Before inserting gene sequence, expression vector can already carry antibody constant region sequence.For example, a method for converting antibody-related VH and VL sequences into full-length antibody gene is to insert them into expression vectors encoding heavy chain constant region and light chain constant region respectively, so that VH sequence is operably connected to CH sequence in carrier, and VL sequence is operably connected to CL sequence in carrier.Or, recombinant expression vector can encode signal peptide that promotes host cell secretion of antibody or fusion protein.Or, gene sequence can be cloned into the carrier of signal peptide that promotes host cell secretion of antibody or fusion protein, so that 3' end of gene sequence encoding signal peptide is connected in frame with 5' end of gene sequence encoding antibody (heavy chain and/or light chain) or fusion protein. The signal peptide can be an immunoglobulin signal peptide or a heterologous signal peptide (i.e., a signal peptide from a non-immunoglobulin protein), for example, MEFGLSLVFLVLILKGVQC (SEQ ID NO:56).
在一些实施方案中,表达载体需含有筛选标记,常见的筛选标记包括二氢叶酸还原酶、谷氨酰胺合成酶、新霉素抗性、潮霉素抗性等筛选基因,以便于转染成功的细胞的筛选分离。将构建好的质粒转染到无上述基因的宿主细胞,经过选择性培养基培养,转染成功的细胞大量生长,产生想要获得的目的蛋白。所得抗体或融合蛋白可通过常规技术手段分离或纯化,如蛋白A-琼脂糖凝胶、离子交换层析、羟基磷灰石层析、凝胶电泳或亲和层析等。In some embodiments, the expression vector needs to contain a screening marker, and common screening markers include dihydrofolate reductase, glutamine synthetase, neomycin resistance, hygromycin resistance and other screening genes, so as to facilitate the screening and separation of successfully transfected cells. The constructed plasmid is transfected into host cells without the above genes, and after culturing in a selective medium, the successfully transfected cells grow in large quantities and produce the desired target protein. The obtained antibody or fusion protein can be separated or purified by conventional technical means, such as protein A-agarose gel, ion exchange chromatography, hydroxyapatite chromatography, gel electrophoresis or affinity chromatography.
实施例Example
以下通过具体的实施例进一步说明本发明的技术方案,具体实施例不代表对本发明保护范围的限制。其他人根据本发明理念所做出的一些非本质的修改和调整仍属于本发明的保护范围。The technical solution of the present invention is further described below by specific embodiments, which do not limit the protection scope of the present invention. Some non-essential modifications and adjustments made by others based on the concept of the present invention still fall within the protection scope of the present invention.
实施例1:PVRIG重组蛋白和抗PVRIG抗体SF35、H4的制备Example 1: Preparation of PVRIG recombinant protein and anti-PVRIG antibodies SF35 and H4
将PVRIG重组蛋白PVRIG-his(如SEQ ID NO:1所示)的DNA序列插入到表达质粒,得到重组质粒。再把上述质粒通过聚醚酰亚胺(PEI)瞬转HEK293细胞,培养后收集上清液,纯化得到PVRIG-his蛋白样品。The DNA sequence of the PVRIG recombinant protein PVRIG-his (shown in SEQ ID NO: 1) was inserted into the expression plasmid to obtain a recombinant plasmid. The above plasmid was then transiently transfected into HEK293 cells through polyetherimide (PEI), and the supernatant was collected after culture and purified to obtain a PVRIG-his protein sample.
PVRIG-his氨基酸序列如下:
The amino acid sequence of PVRIG-his is as follows:
抗体SF35和抗体H4的重链和轻链的氨基酸序列见表3。将抗体重链和轻链的核酸序列分别克隆到表达质粒中,然后转入CHO-K1细胞,培养后收集上清液,纯化得到抗体。The amino acid sequences of the heavy and light chains of antibody SF35 and antibody H4 are shown in Table 3. The nucleic acid sequences of the heavy and light chains of the antibodies were cloned into expression plasmids, respectively, and then transferred into CHO-K1 cells. After culture, the supernatant was collected and purified to obtain the antibodies.
表3抗体SF35和抗体H4的氨基酸序列
Table 3 Amino acid sequences of antibody SF35 and antibody H4
实施例2:抗PVRIG/TIGIT双特异性抗体以及VHH-Fc融合蛋白的制备Example 2: Preparation of anti-PVRIG/TIGIT bispecific antibodies and VHH-Fc fusion proteins
构建了2种结构的抗PVRIG/TIGIT双特异性抗体,分别命名为(1)双特异性抗体Bi-VH1,其结构示意图如图1A所示;(2)双特异性抗体Bi-VH3,其结构示意图如图1B所示;其中双特异性抗体Bi-VH1的结构特点,就是把抗PVRIG的VHH片段连接在抗TIGIT抗体的重链的N端,例如双特异性抗体Bi-VH1-94Y和Bi-VH1-94W;而双特异性抗体Bi-VH3的结构特点,就是把抗PVRIG的VHH片段连接在抗TIGIT抗体的重链的C端,例如双特异性抗体Bi-VH3-94Y和Bi-VH3-94W。VHH-Fc融合蛋白从N端到C端依次包含如下结构:抗PVRIG的VHH片段、肽接头和Fc片段。Two structures of anti-PVRIG/TIGIT bispecific antibodies were constructed, named as (1) bispecific antibody Bi-VH1, whose schematic diagram is shown in FIG1A ; (2) bispecific antibody Bi-VH3, whose schematic diagram is shown in FIG1B ; the structural feature of the bispecific antibody Bi-VH1 is that the anti-PVRIG VHH fragment is connected to the N-terminus of the heavy chain of the anti-TIGIT antibody, such as the bispecific antibodies Bi-VH1-94Y and Bi-VH1-94W; and the structural feature of the bispecific antibody Bi-VH3 is that the anti-PVRIG VHH fragment is connected to the C-terminus of the heavy chain of the anti-TIGIT antibody, such as the bispecific antibodies Bi-VH3-94Y and Bi-VH3-94W. The VHH-Fc fusion protein comprises the following structures from the N-terminus to the C-terminus: the anti-PVRIG VHH fragment, the peptide linker and the Fc fragment.
抗体或VHH-Fc融合蛋白的相关序列见表1-2以及表4-7;其中VHH-Fc融合蛋白N1-94Y-Fc含有两条相同的序列(如SEQ ID NO:36所示),其核酸序列如SEQ ID NO:46所示;VHH-Fc融合蛋白N1-94W-Fc含有两条相同的序列(如SEQ ID NO:37所示),其核酸序列如SEQ ID NO:47所示;VHH-Fc融合蛋白32含有两条相同的序列(如SEQ ID NO:38所示),其核酸序列如SEQ ID NO:48所示;VHH-Fc融合蛋白34含有两条相同的序列(如SEQ ID NO:39所示),其核酸序列如SEQ ID NO:49所示;VHH-Fc融合蛋白37含有两条相同的序列(如SEQ ID NO:40所示),其核酸序列如SEQ ID NO:50所示。The relevant sequences of antibodies or VHH-Fc fusion proteins are shown in Tables 1-2 and 4-7; among them, VHH-Fc fusion protein N1-94Y-Fc contains two identical sequences (as shown in SEQ ID NO:36), and its nucleic acid sequence is shown in SEQ ID NO:46; VHH-Fc fusion protein N1-94W-Fc contains two identical sequences (as shown in SEQ ID NO:37), and its nucleic acid sequence is shown in SEQ ID NO:47; VHH-Fc fusion protein 32 contains two identical sequences (as shown in SEQ ID NO:38), and its nucleic acid sequence is shown in SEQ ID NO:48; VHH-Fc fusion protein 34 contains two identical sequences (as shown in SEQ ID NO:39), and its nucleic acid sequence is shown in SEQ ID NO:49; VHH-Fc fusion protein 37 contains two identical sequences (as shown in SEQ ID NO:40), and its nucleic acid sequence is shown in SEQ ID NO:50.
双特异性抗体Bi-VH1-94Y含有两条序列相同的第一多肽(如SEQ ID NO:41所示)和两条序列相同的第二多肽(如SEQ ID NO:31所示),第一多肽由抗PVRIG的VHH片段(如SEQ ID NO:13所示)、肽接头L1(GGGGSGGGGS,如SEQ ID NO:32所示)和抗TIGIT重链序列(如SEQ ID NO:29所示)组成,第二多肽由抗TIGIT轻链序列(如SEQ ID NO:31所示)组成,其第一多肽的核酸序列如SEQ ID NO:51所示,第二多肽的核酸序列如SEQ ID NO:45所示;双特异性抗体Bi-VH1-94W含有两条序列相同的第一多肽(如SEQ ID NO:42所示)和两条序列相同的第二多肽(如SEQ ID NO:31所示),第一多肽由抗PVRIG的VHH片段(如SEQ ID NO:14所示)、肽接头L1(GGGGSGGGGS,如SEQ ID NO:32所示)和抗TIGIT重链序列(如SEQ ID NO:29所示)组成,第二多肽由抗TIGIT轻链序列(如SEQ ID NO:31所示)组成,其第一多肽的核酸序列如SEQ ID NO:52所示,第二多肽的核酸序列如SEQ ID NO:45所示;双特异性抗体Bi-VH3-94Y含有两条序列相同的第一多肽(如SEQ ID NO:43所示)和两条序列相同的第二多肽(如SEQ ID NO:31所示),第一多肽由抗TIGIT重链序列(如SEQ ID NO:30所示)、肽接头L2(GGGGSGGGGSGGGGS,如SEQ ID NO:33所示)和抗PVRIG的VHH片段(如SEQ ID NO:13所示)组成,第二多肽由抗TIGIT轻链序列(如SEQ ID NO:31所示)组成,其第一多肽的核酸序列如SEQ ID NO:53所示,第二多肽的核酸序列如SEQ ID NO:45所示;双特异性抗体Bi-VH3-94W含有两条序列相同的第一多肽(如SEQ ID NO:44所示)和两条序列相同的第二多肽(如SEQ ID NO:31所示),第一多肽由抗TIGIT重链序列(如SEQ ID NO:30所示)、肽接头L2(GGGGSGGGGSGGGGS,如SEQ ID NO:33所示)和抗PVRIG的VHH片段(如SEQ ID NO:14所示)组成,第二多肽由抗TIGIT轻链序列(如SEQ ID NO:31所示)组成,其第一多肽的核酸序列如SEQ ID NO:54所示,第二多肽的核酸序列如SEQ ID NO:45所示。The bispecific antibody Bi-VH1-94Y contains two first polypeptides with identical sequences (as shown in SEQ ID NO:41) and two second polypeptides with identical sequences (as shown in SEQ ID NO:31), the first polypeptide is composed of an anti-PVRIG VHH fragment (as shown in SEQ ID NO:13), a peptide linker L1 (GGGGSGGGGS, as shown in SEQ ID NO:32) and an anti-TIGIT heavy chain sequence (as shown in SEQ ID NO:29), and the second polypeptide is composed of an anti-TIGIT light chain sequence (as shown in SEQ ID NO:31), the nucleic acid sequence of the first polypeptide is as shown in SEQ ID NO:51, and the nucleic acid sequence of the second polypeptide is as shown in SEQ ID NO:45; The heterologous antibody Bi-VH1-94W contains two first polypeptides with identical sequences (as shown in SEQ ID NO:42) and two second polypeptides with identical sequences (as shown in SEQ ID NO:31), the first polypeptide is composed of an anti-PVRIG VHH fragment (as shown in SEQ ID NO:14), a peptide linker L1 (GGGGSGGGGS, as shown in SEQ ID NO:32) and an anti-TIGIT heavy chain sequence (as shown in SEQ ID NO:29), and the second polypeptide is composed of an anti-TIGIT light chain sequence (as shown in SEQ ID NO:31), the nucleic acid sequence of the first polypeptide is as shown in SEQ ID NO:52, and the nucleic acid sequence of the second polypeptide is as shown in SEQ ID NO:45; the bispecific antibody Bi-VH3-94Y contains two first polypeptides with identical sequences (as shown in SEQ ID NO:43) and two second polypeptides with identical sequences (as shown in SEQ ID NO:31), the first polypeptide is composed of an anti-TIGIT heavy chain sequence (as shown in SEQ ID NO:30), a peptide linker L2 (GGGGSGGGGSGGGGS, as shown in SEQ ID NO:33) and an anti-PVRIG VHH fragment (as shown in SEQ ID NO:13), the second polypeptide is composed of an anti-TIGIT light chain sequence (as shown in SEQ ID NO:31), the nucleic acid sequence of the first polypeptide is as shown in SEQ ID NO:53, and the nucleic acid sequence of the second polypeptide is as shown in SEQ ID NO:45; The heterologous antibody Bi-VH3-94W contains two first polypeptides with identical sequences (as shown in SEQ ID NO:44) and two second polypeptides with identical sequences (as shown in SEQ ID NO:31), the first polypeptide is composed of an anti-TIGIT heavy chain sequence (as shown in SEQ ID NO:30), a peptide linker L2 (GGGGSGGGGSGGGGS, as shown in SEQ ID NO:33) and an anti-PVRIG VHH fragment (as shown in SEQ ID NO:14), and the second polypeptide is composed of an anti-TIGIT light chain sequence (as shown in SEQ ID NO:31), the nucleic acid sequence of the first polypeptide is shown in SEQ ID NO:54, and the nucleic acid sequence of the second polypeptide is shown in SEQ ID NO:45.
表4抗PVRIG的VHH片段的序列及其CDR
Table 4 Sequences and CDRs of VHH fragments against PVRIG
表5 VHH-Fc融合蛋白的序列及其组成
Table 5 Sequence and composition of VHH-Fc fusion protein
将双特异性抗体的第一多肽和第二多肽的核酸序列分别克隆到表达质粒中,然后瞬转HEK293F细胞,培养后收集上清液,纯化得到双特异性抗体。The nucleic acid sequences of the first polypeptide and the second polypeptide of the bispecific antibody are cloned into expression plasmids respectively, and then transiently transfected into HEK293F cells. After culture, the supernatant is collected and purified to obtain the bispecific antibody.
将VHH-Fc融合蛋白的核酸序列克隆到表达质粒中,然后瞬转HEK293F细胞,培养后收集上清液,纯化得到VHH-Fc融合蛋白。The nucleic acid sequence of the VHH-Fc fusion protein is cloned into an expression plasmid, and then transiently transfected into HEK293F cells. After culture, the supernatant is collected and purified to obtain the VHH-Fc fusion protein.
实施例3:使用Biacore测定抗PVRIG/TIGIT双特异性抗体以及VHH-Fc融合蛋白的解离常数Example 3: Determination of dissociation constants of anti-PVRIG/TIGIT bispecific antibodies and VHH-Fc fusion proteins using Biacore
使用Biacore T200检测抗体以及VHH-Fc融合蛋白对PVRIG-his和TIGIT-his蛋白的亲和力。在CM5芯片表面偶联抗体或VHH-Fc融合蛋白,然后使用芯片分别捕获PVRIG-his或TIGIT-his。将不同浓度的PVRIG-his或TIGIT-his蛋白注入CM5芯片。如表6所示,VHH-Fc融合蛋白32,34和37与PVRIG-his蛋白展现出较强的亲和力,KD值分别是0.65nM、0.89nM和0.96nM。如表7所示,双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y和Bi-VH3-94W结合PVRIG-his的亲和力很高,KD值分别是3.05nM、2.35nM、5.64nM和5.83nM,和VHH-Fc融合蛋白N1-94W-Fc、N1-94Y-Fc的亲和力相当。如表8所示,双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y和Bi-VH3-94W结合TIGIT-his的亲和力很高,KD值分别是4.99nM、5.58nM、3.91nM和3.70nM,和亲本抗体h10D8OF(其重链的序列如SEQ ID NO:29所示,轻链的序列如SEQ ID NO:31所示)的亲和力相当。Biacore T200 was used to detect the affinity of antibodies and VHH-Fc fusion proteins to PVRIG-his and TIGIT-his proteins. Antibodies or VHH-Fc fusion proteins were coupled to the surface of the CM5 chip, and then the chip was used to capture PVRIG-his or TIGIT-his, respectively. Different concentrations of PVRIG-his or TIGIT-his proteins were injected into the CM5 chip. As shown in Table 6, VHH-Fc fusion proteins 32, 34, and 37 showed strong affinity to PVRIG-his protein, with KD values of 0.65nM, 0.89nM, and 0.96nM, respectively. As shown in Table 7, the bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W bind to PVRIG-his with high affinity, with KD values of 3.05 nM, 2.35 nM, 5.64 nM and 5.83 nM, respectively, which are comparable to the affinities of the VHH-Fc fusion proteins N1-94W-Fc and N1-94Y-Fc. As shown in Table 8, the bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W bound to TIGIT-his with high affinities, with KD values of 4.99nM, 5.58nM, 3.91nM and 3.70nM, respectively, which are comparable to the affinities of the parent antibody h10D8OF (the sequence of its heavy chain is shown in SEQ ID NO:29, and the sequence of its light chain is shown in SEQ ID NO:31).
表6抗体或VHH-Fc融合蛋白与PVRIG-his(实施例1制备)的亲和力数据
Table 6 Affinity data of antibodies or VHH-Fc fusion proteins and PVRIG-his (prepared in Example 1)
表7抗体或VHH-Fc融合蛋白与PVRIG-his(购自ACRO,货号PVG-H52H5)的亲和力数据
Table 7 Affinity data of antibodies or VHH-Fc fusion proteins and PVRIG-his (purchased from ACRO, catalog number PVG-H52H5)
表8抗体与TIGIT-his(购自ACRO,货号TIT-H52H5)的亲和力数据
Table 8 Affinity data of antibodies and TIGIT-his (purchased from ACRO, catalog number TIT-H52H5)
实施例4:抗PVRIG/TIGIT双特异性抗体与过表达TIGIT的细胞的结合实验Example 4: Binding experiment of anti-PVRIG/TIGIT bispecific antibody and cells overexpressing TIGIT
取适量双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y和Bi-VH3-94W,以及亲本抗TIGIT抗体h10D8OF。在96孔V型板中分别用1×PBS稀释至200nM作为起始浓度,用1×PBS进行3倍梯度稀释,共得到9个系列稀释浓度。Take appropriate amounts of bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W, and parent anti-TIGIT antibody h10D8OF, dilute them to 200 nM with 1× PBS as the starting concentration in a 96-well V-shaped plate, and perform 3-fold gradient dilution with 1× PBS to obtain a total of 9 serial dilution concentrations.
取生长状态良好的Jurkat-TIGIT细胞(将人全长TIGIT基因(SEQ ID NO:55)转染入Jurkat细胞系(ATCC,Clone E6-1,TIB-152TM)中,得到可以稳定表达人TIGIT的细胞系,命名为Jurkat-TIGIT细胞),离心弃去上清,用1×PBS重悬细胞使其密度为1×107cells/mL,按照50μL/孔加入96孔V型板,此时细胞数为5×105cells/孔,每孔加入50μL对应浓度的抗体样品并混匀,此时抗体终浓度最大值为100nM。将96孔V型板置于4℃冰箱中孵育60min。然后将96孔V型板离心去掉上清后,用1×PBS洗涤后去掉上清以进行下一步的孵育。用1×PBS按照1:500比例稀释anti-FC PE(购自BioLegend,货号366903),除了空白孔外每孔加入100μL稀释的anti-FC PE重悬细胞,置于4℃冰箱中避光孵育30min。孵育完成后用1×PBS洗涤,最后用1×PBS按照每孔150μL体积重悬。用流式细胞仪收集细胞,检测细胞表面结合的荧光抗体,得到原始数据平均荧光强度(MFI)值。最后得到的结果以抗体浓度为横坐标,以MFI为纵坐标用四参数模型进行曲线拟合,结果如图2所示。Take Jurkat-TIGIT cells with good growth status (transfect the human full-length TIGIT gene (SEQ ID NO: 55) into the Jurkat cell line (ATCC, Clone E6-1, TIB-152 TM ) to obtain a cell line that can stably express human TIGIT, named Jurkat-TIGIT cells), centrifuge and discard the supernatant, resuspend the cells with 1×PBS to a density of 1×10 7 cells/mL, add 50μL/well to a 96-well V-shaped plate, at this time the number of cells is 5×10 5 cells/well, add 50μL of the corresponding concentration of antibody sample to each well and mix well, at this time the maximum final concentration of the antibody is 100nM. Place the 96-well V-shaped plate in a 4°C refrigerator and incubate for 60min. Then centrifuge the 96-well V-shaped plate to remove the supernatant, wash it with 1×PBS and remove the supernatant for the next incubation. Anti-FC PE (purchased from BioLegend, catalog number 366903) was diluted with 1×PBS at a ratio of 1:500. 100 μL of diluted anti-FC PE was added to each well except the blank well to resuspend the cells, and placed in a 4°C refrigerator in the dark for 30 minutes. After incubation, the cells were washed with 1×PBS and finally resuspended with 1×PBS at a volume of 150 μL per well. The cells were collected by flow cytometry, and the fluorescent antibodies bound to the cell surface were detected to obtain the mean fluorescence intensity (MFI) value of the original data. The final results were fitted with a four-parameter model with antibody concentration as the horizontal axis and MFI as the vertical axis, and the results are shown in Figure 2.
人全长TIGIT基因序列如下:
The full-length human TIGIT gene sequence is as follows:
结果显示,双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y和Bi-VH3-94W均能结合Jurkat-TIGIT细胞,EC50分别是0.23nM、0.23nM、0.23nM和0.12nM。与亲本抗TIGIT抗体h10D8OF对细胞表面表达的TIGIT的结合能力(EC50=0.13nM)相似。The results showed that the bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W could bind to Jurkat-TIGIT cells with EC 50 values of 0.23 nM, 0.23 nM, 0.23 nM and 0.12 nM, respectively, which were similar to the binding ability of the parent anti-TIGIT antibody h10D8OF to TIGIT expressed on the cell surface (EC 50 = 0.13 nM).
实施例5:抗PVRIG/TIGIT双特异性抗体和过表达PVRIG的细胞的结合实验Example 5: Binding experiment of anti-PVRIG/TIGIT bispecific antibody and cells overexpressing PVRIG
取适量双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y和Bi-VH3-94W,以及VHH-Fc融合蛋白N1-94W-Fc、N1-94Y-Fc、32、34和37以及抗体SF35、hIgG1(北京义翘神州科技股份有限公司,货号:MA14OC2903)。在96孔V型板中分别用1×PBS稀释至200nM作为起始浓度,用1×PBS进行3倍梯度稀释,共得到9个系列稀释浓度。Take appropriate amounts of bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W, VHH-Fc fusion proteins N1-94W-Fc, N1-94Y-Fc, 32, 34 and 37, and antibodies SF35 and hIgG1 (Beijing Sino Biological Technology Co., Ltd., Cat. No. MA14OC2903). Dilute to 200 nM with 1× PBS as the starting concentration in a 96-well V-shaped plate, and perform 3-fold gradient dilution with 1× PBS to obtain a total of 9 serial dilution concentrations.
把PVRIG的cDNA(购自北京义翘神州科技股份有限公司,货号HG28312-UT)转入Jurkat-NFAT细胞(Jurkat-NFAT细胞构建:把含NFAT荧光素酶报告基因的质粒电转入Jurkat细胞)中,得到过表达PVRIG的Jurkat-NFAT细胞,命名为Jurkat-NFAT-PVRIG。取生长状态良好的Jurkat-NFAT-PVRIG细胞,离心弃去上清,用1×PBS重悬细胞使其密度为1×107cells/mL,按照50μL/孔加入96孔V型板(康宁,货号:3897),此时细胞数为5×105cells/孔,每孔加入50μL对应浓度的抗体或VHH-Fc融合蛋白样品并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为100nM。将96孔V型板置于4℃冰箱中孵育60min。孵育完成后将96孔V型板离心去掉上清后,用1×PBS洗涤后去掉上清以进行下一步的孵育。用1×PBS按照1:500比例稀释anti-FC PE(购自BioLegend,货号366903),除了空白孔外每孔加入100μL稀释的anti-FC PE重悬细胞,置于4℃冰箱中避光孵育30min。孵育完成后用1×PBS洗涤,最后用1×PBS按照每孔150μL体积重悬。用流式细胞仪收集细胞,检测细胞表面结合的荧光抗体,得到原始数据MFI值。最后得到的结果以抗体或VHH-Fc融合蛋白浓度为横坐标,以MFI为纵坐标用四参数模型进行曲线拟合,结果如表9、图3和图4所示。The cDNA of PVRIG (purchased from Beijing Sino Biological Shenzhou Technology Co., Ltd., catalog number HG28312-UT) was transferred into Jurkat-NFAT cells (Construction of Jurkat-NFAT cells: Plasmid containing NFAT luciferase reporter gene was electroporated into Jurkat cells) to obtain Jurkat-NFAT cells overexpressing PVRIG, named Jurkat-NFAT-PVRIG. Jurkat-NFAT-PVRIG cells with good growth were taken, centrifuged and the supernatant was discarded, and the cells were resuspended in 1×PBS to a density of 1×10 7 cells/mL, and added to a 96-well V-shaped plate (Corning, catalog number: 3897) at a rate of 50 μL/well. At this time, the number of cells was 5×10 5 cells/well. 50 μL of the corresponding concentration of antibody or VHH-Fc fusion protein sample was added to each well and mixed. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein was 100 nM. The 96-well V-shaped plate was placed in a 4°C refrigerator for incubation for 60 minutes. After the incubation was completed, the 96-well V-shaped plate was centrifuged to remove the supernatant, and then washed with 1×PBS and the supernatant was removed for the next incubation. Anti-FC PE (purchased from BioLegend, catalog number 366903) was diluted with 1×PBS at a ratio of 1:500, and 100μL of diluted anti-FC PE was added to each well except the blank well to resuspend the cells, and placed in a 4°C refrigerator in the dark for 30 minutes. After the incubation was completed, it was washed with 1×PBS and finally resuspended with 1×PBS at a volume of 150μL per well. The cells were collected by flow cytometry, and the fluorescent antibodies bound to the cell surface were detected to obtain the original data MFI value. The final results were fitted with a four-parameter model with the antibody or VHH-Fc fusion protein concentration as the horizontal axis and MFI as the vertical axis. The results are shown in Table 9, Figure 3 and Figure 4.
表9抗体或VHH-Fc融合蛋白的细胞水平亲和力
*相对活性%={EC50(样品)-EC50(SF35)}/EC50(SF35)×100%Table 9 Cellular affinity of antibodies or VHH-Fc fusion proteins
*Relative activity % = {EC 50 (sample) - EC 50 (SF35)} / EC 50 (SF35) × 100%
从表9和图3结果可知,VHH-Fc融合蛋白32、34和37均能够以高亲和力与Jurkat-NFAT-PVRIG细胞表面高表达的人PVRIG结合,VHH-Fc融合蛋白32的EC50为0.67nM,VHH-Fc融合蛋白34的EC50为0.95nM,VHH-Fc融合蛋白37的EC50为0.87nM,VHH-Fc融合蛋白32和37的结合活性优于抗体SF35(EC50=0.91nM)。From the results in Table 9 and Figure 3, it can be seen that VHH-Fc fusion proteins 32, 34 and 37 can bind to human PVRIG highly expressed on the surface of Jurkat-NFAT-PVRIG cells with high affinity. The EC50 of VHH-Fc fusion protein 32 is 0.67nM, the EC50 of VHH-Fc fusion protein 34 is 0.95nM, and the EC50 of VHH-Fc fusion protein 37 is 0.87nM. The binding activity of VHH-Fc fusion proteins 32 and 37 is better than that of antibody SF35 ( EC50 = 0.91nM).
从图4结果可知,双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y和Bi-VH3-94W均能明显结合Jurkat-NFAT-PVRIG细胞,EC50分别是0.26nM、0.32nM、1.72nM和2.33nM。双特异性抗体Bi-VH1-94Y、Bi-VH1-94W与VHH-Fc融合蛋白N1-94W-Fc(EC50=0.34nM)和N1-94Y-Fc(EC50=0.40nM)对细胞表面表达的PVRIG的结合能力相当。As shown in the results of Figure 4, the bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y and Bi-VH3-94W can all bind to Jurkat-NFAT-PVRIG cells significantly, with EC 50 values of 0.26 nM, 0.32 nM, 1.72 nM and 2.33 nM, respectively. The bispecific antibodies Bi-VH1-94Y and Bi-VH1-94W have comparable binding abilities to PVRIG expressed on the cell surface as the VHH-Fc fusion proteins N1-94W-Fc (EC 50 = 0.34 nM) and N1-94Y-Fc (EC 50 = 0.40 nM).
实施例6:VHH-Fc融合蛋白阻断配体PVRL2与细胞表面PVRIG结合的试验Example 6: Experiment on blocking the binding of ligand PVRL2 to cell surface PVRIG by VHH-Fc fusion protein
取适量VHH-Fc融合蛋白32、34、37以及抗体SF35、H4、hIgG1(北京义翘神州科技股份有限公司,货号:MA14OC2903)并用1×PBS稀释至600nM作为起始浓度,用1×PBS进行4倍梯度稀释,共得到10个系列稀释浓度。Take appropriate amount of VHH-Fc fusion proteins 32, 34, 37 and antibodies SF35, H4, hIgG1 (Beijing Sino Biological Technology Co., Ltd., Catalog No.: MA14OC2903) and dilute to 600 nM with 1×PBS as the starting concentration, and perform 4-fold gradient dilution with 1×PBS to obtain 10 serial dilution concentrations.
取生长状态良好的Jurkat-NFAT-PVRIG细胞,离心弃去上清,用1×PBS重悬细胞使其密度为1×107cells/mL,按照50μL/孔加入96孔V型板(康宁,货号:3897),此时细胞数为5×105cells/孔,每孔加入50μL对应浓度的抗体或VHH-Fc融合蛋白并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为300nM。将96孔V型板置于4℃冰箱中孵育10min。等待抗体孵育期间取适量的配体PVRL2-mFc-bio(购自Acro,货号CD2-H82A3)用1×PBS稀释至600nM。待孵育完成后取出96孔V型板,按照每孔50μL体积尽快加入配体PVRL2-mFc稀释液并用移液枪吹打混匀,此时配体终浓度为200nM,抗体或VHH-Fc融合蛋白终浓度最大值为200nM。将96孔V型板置于4℃冰箱中继续孵育60min。Take Jurkat-NFAT-PVRIG cells with good growth status, centrifuge and discard the supernatant, resuspend the cells with 1×PBS to a density of 1×10 7 cells/mL, add 50μL/well to a 96-well V-shaped plate (Corning, Catalog No.: 3897), at this time the number of cells is 5×10 5 cells/well, add 50μL of the corresponding concentration of antibody or VHH-Fc fusion protein to each well and mix well, at this time the maximum final concentration of antibody or VHH-Fc fusion protein is 300nM. Place the 96-well V-shaped plate in a 4℃ refrigerator and incubate for 10min. While waiting for the antibody incubation, take an appropriate amount of ligand PVRL2-mFc-bio (purchased from Acro, Catalog No. CD2-H82A3) and dilute it to 600nM with 1×PBS. After the incubation is completed, take out the 96-well V-shaped plate, add the ligand PVRL2-mFc dilution as soon as possible according to the volume of 50 μL per well and mix it with a pipette. At this time, the final concentration of the ligand is 200 nM, and the maximum final concentration of the antibody or VHH-Fc fusion protein is 200 nM. Place the 96-well V-shaped plate in a 4°C refrigerator and continue incubation for 60 minutes.
孵育完成后将96孔V型板离心去掉上清,用1×PBS洗涤后去掉上清以进行下一步的孵育。用1×PBS按照1:800比例稀释链霉亲和素-藻红蛋白(SA-PE;BioLegend,货号740452),除了空白孔外每孔加入100μL稀释的SA-PE重悬细胞,置于4℃冰箱中避光孵育30min。After the incubation is completed, the 96-well V-shaped plate is centrifuged to remove the supernatant, and then washed with 1×PBS to remove the supernatant for the next incubation. Streptavidin-phycoerythrin (SA-PE; BioLegend, Cat. No. 740452) is diluted with 1×PBS at a ratio of 1:800, and 100 μL of diluted SA-PE is added to each well except the blank well to resuspend the cells, and incubated in a 4°C refrigerator away from light for 30 minutes.
用流式细胞仪收集细胞,检测细胞表面结合的荧光抗体,得到原始数据MFI值。最后得到的结果以抗体或VHH-Fc融合蛋白浓度为横坐标,以MFI为纵坐标用四参数模型进行曲线拟合,结果如图5所示。Cells were collected by flow cytometry, and fluorescent antibodies bound to the cell surface were detected to obtain the original data MFI value. The final result was obtained by using the antibody or VHH-Fc fusion protein concentration as the horizontal axis and MFI as the vertical axis to perform curve fitting using a four-parameter model, and the results are shown in FIG5 .
从图5结果可知,VHH-Fc融合蛋白32、34和37均能够阻断配体PVRL2与Jurkat-NFAT-PVRIG细胞表面表达的人PVRIG结合,VHH-Fc融合蛋白32的IC50为24.48nM,VHH-Fc融合蛋白34的IC50为1.67nM,VHH-Fc融合蛋白37的IC50为1.01nM,VHH-Fc融合蛋白34和37的阻断能力与抗体SF35(IC50=0.56)相当。As can be seen from the results in Figure 5, VHH-Fc fusion proteins 32, 34 and 37 can all block the binding of the ligand PVRL2 to human PVRIG expressed on the surface of Jurkat-NFAT-PVRIG cells. The IC50 of VHH-Fc fusion protein 32 is 24.48nM, the IC50 of VHH-Fc fusion protein 34 is 1.67nM, and the IC50 of VHH-Fc fusion protein 37 is 1.01nM. The blocking abilities of VHH-Fc fusion proteins 34 and 37 are comparable to those of antibody SF35 ( IC50 = 0.56).
实施例7:双特异性抗体的PVRIG细胞活性实验Example 7: PVRIG cell activity experiment of bispecific antibodies
1)取适量VHH-Fc融合蛋白32、34、37以及抗体SF35、H4、hIgG1(北京义翘神州科技股份有限公司,货号:MA14OC2903)用检测用稀释液(向500mL的RPMI 1640培养基(Gibco,货号:11875093)中加入55mLFBS(ExCell Biology,货号:FSP500)作为检测用稀释液)稀释至600nM作为起始浓度,用检测用稀释液进行3倍梯度稀释,共得到10个系列稀释浓度;取96孔白色板,按照每孔50μL体积加入备用。1) Take appropriate amount of VHH-Fc fusion proteins 32, 34, 37 and antibodies SF35, H4, hIgG1 (Beijing Yiqiao Shenzhou Technology Co., Ltd., Catalog No.: MA14OC2903) and dilute to 600nM as the starting concentration with detection diluent (add 55mL FBS (ExCell Biology, Catalog No.: FSP500) to 500mL RPMI 1640 culture medium (Gibco, Catalog No.: 11875093) as detection diluent), and perform 3-fold gradient dilution with detection diluent to obtain 10 serial dilution concentrations; take a 96-well white plate and add 50μL volume to each well for later use.
把PVRL2的cDNA(购自北京义翘神州科技股份有限公司,货号HG10005-UT)转入CHO-OKT3细胞(构建方法参见专利CN111748580A)中,得到过表达PVRL2的CHO-OKT3细胞,命名为CHO-OKT3-PVRL2。取生长状态良好的Jurkat-NFAT-PVRIG细胞和CHO-OKT3-PVRL2细胞,离心弃上清后用检测用稀释液重悬后用细胞计数仪进行计数。根据细胞密度,Jurkat-NFAT-PVRIG细胞用检测用稀释液稀释,使细胞密度为4×106cells/mL。取出已加50μL/孔抗体或VHH-Fc融合蛋白的96孔白色板,每孔加入50μLJurkat-NFAT-PVRIG细胞并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为300nM。The cDNA of PVRL2 (purchased from Beijing Yiqiao Shenzhou Technology Co., Ltd., catalog number HG10005-UT) was transferred into CHO-OKT3 cells (for the construction method, see patent CN111748580A) to obtain CHO-OKT3 cells overexpressing PVRL2, named CHO-OKT3-PVRL2. Take Jurkat-NFAT-PVRIG cells and CHO-OKT3-PVRL2 cells with good growth status, centrifuge and discard the supernatant, resuspend them in the detection diluent, and count them with a cell counter. According to the cell density, Jurkat-NFAT-PVRIG cells are diluted with the detection diluent to make the cell density 4×10 6 cells/mL. Take out the 96-well white plate with 50 μL/well antibody or VHH-Fc fusion protein, add 50 μL Jurkat-NFAT-PVRIG cells to each well and mix well. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein is 300nM.
将96孔白色板置于37℃CO2恒温培养箱中孵育10min,取出96孔白色板。CHO-OKT3-PVRL2细胞用检测用稀释液稀释,使细胞密度为2×106cells/mL。按照每孔50μL体积加入CHO-OKT3-PVRL2细胞并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为200nM。将96孔白色板置于CO2恒温培养箱中37℃孵育6h。提前从-20℃冰箱中取出Bio-LiteTMLuciferaseAssay System显色液,室温下溶解。孵育后将96孔白色板从培养箱中取出,室温平衡约8min,然后每孔中加入70μL显色液,室温避光放置5min,尽快读板。Place the 96-well white plate in a 37°C CO 2 constant temperature incubator and incubate for 10 minutes, then remove the 96-well white plate. Dilute CHO-OKT3-PVRL2 cells with the detection diluent to a cell density of 2×10 6 cells/mL. Add CHO-OKT3-PVRL2 cells at a volume of 50 μL per well and mix well. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein is 200 nM. Place the 96-well white plate in a CO 2 constant temperature incubator and incubate at 37°C for 6 hours. Take out the Bio-Lite TM Luciferase Assay System colorimetric solution from the -20°C refrigerator in advance and dissolve it at room temperature. After incubation, remove the 96-well white plate from the incubator, equilibrate at room temperature for about 8 minutes, then add 70 μL of colorimetric solution to each well, place it at room temperature away from light for 5 minutes, and read the plate as soon as possible.
用SpectraMax多功能酶标仪上的Luminescence检测模块,设置PMT and Optics为500,读取相对光单位(RLU),读板前震荡。以抗体或VHH-Fc融合蛋白浓度为横坐标,相对光单位为纵坐标,以四参数模型对样品进行曲线拟合,得出四参数曲线如图6所示。Use the Luminescence detection module on the SpectraMax multi-function microplate reader, set PMT and Optics to 500, read the relative light unit (RLU), and shake before reading the plate. With the antibody or VHH-Fc fusion protein concentration as the horizontal axis and the relative light unit as the vertical axis, the sample was curve-fitted using the four-parameter model, and the four-parameter curve was obtained as shown in Figure 6.
结果显示,VHH-Fc融合蛋白32、34和37均能够有效阻断PVRL2-PVRIG的抑制信号,从而激活Jurkat的NFAT信号通路。VHH-Fc融合蛋白32的EC50为140.9nM,VHH-Fc融合蛋白34的EC50为124.8nM,VHH-Fc融合蛋白37的EC50为10.0nM。The results showed that VHH-Fc fusion proteins 32, 34 and 37 could effectively block the inhibitory signal of PVRL2-PVRIG, thereby activating the NFAT signaling pathway of Jurkat. The EC 50 of VHH-Fc fusion protein 32 was 140.9 nM, the EC 50 of VHH-Fc fusion protein 34 was 124.8 nM, and the EC 50 of VHH-Fc fusion protein 37 was 10.0 nM.
2)取适量双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y、Bi-VH3-94W、VHH-Fc融合蛋白N1-94Y-Fc和N1-94W-Fc用RPMI 1640培养基稀释至600nM作为起始浓度,用RPMI 1640培养基进行5倍梯度稀释,共得到8个系列稀释浓度;取96孔白色板,按照每孔100μL体积加入备用。2) Take appropriate amount of bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y, Bi-VH3-94W, VHH-Fc fusion proteins N1-94Y-Fc and N1-94W-Fc and dilute them to 600 nM with RPMI 1640 medium as the starting concentration, and perform 5-fold gradient dilution with RPMI 1640 medium to obtain 8 serial dilution concentrations in total; take a 96-well white plate and add 100 μL volume to each well for later use.
取生长状态良好的Jurkat-NFAT-PVRIG细胞和CHO-OKT3-PVRL2细胞,离心弃上清后用含10%FBS(胎牛血清)的RPMI 1640培养基重悬后用细胞计数仪进行计数。Jurkat-NFAT-PVRIG细胞用含10%FBS的RPMI 1640培养基稀释,使细胞密度为4×106cells/mL。取出已加100μL/孔抗体或VHH-Fc融合蛋白的96孔白色板,每孔加入50μLJurkat-NFAT-PVRIG细胞并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为400nM。Take Jurkat-NFAT-PVRIG cells and CHO-OKT3-PVRL2 cells that are in good growth condition, centrifuge and discard the supernatant, resuspend them in RPMI 1640 medium containing 10% FBS (fetal bovine serum), and count them using a cell counter. Dilute Jurkat-NFAT-PVRIG cells with RPMI 1640 medium containing 10% FBS to a cell density of 4×10 6 cells/mL. Take out the 96-well white plate to which 100 μL/well of antibody or VHH-Fc fusion protein has been added, add 50 μL of Jurkat-NFAT-PVRIG cells to each well and mix well. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein is 400 nM.
CHO-OKT3-PVRL2细胞用含10%FBS的RPMI 1640培养基稀释,使细胞密度为2×106cells/mL。取出加有抗体和Jurkat-NFAT-PVRIG细胞的96孔白色板,按照每孔50μL体积加入CHO-OKT3-PVRL2细胞并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为300nM。将白色板置于CO2恒温培养箱中37℃孵育6h。CHO-OKT3-PVRL2 cells were diluted with RPMI 1640 medium containing 10% FBS to a cell density of 2×10 6 cells/mL. Take out the 96-well white plate with antibodies and Jurkat-NFAT-PVRIG cells, add CHO-OKT3-PVRL2 cells at a volume of 50 μL per well and mix well. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein is 300 nM. Place the white plate in a CO 2 constant temperature incubator at 37°C for 6 hours.
提前从-20℃冰箱中取出Bio-LiteTMLuciferaseAssay System显色液,室温下溶解。将白色板从培养箱中取出,室温平衡约8min,然后每孔中加入70μL显色液,室温避光放置5min,尽快读板。用SpectraMax多功能酶标仪上的Luminescence检测模块,设置PMT and Optics为500,读取相对光单位(RLU),读板前震荡。以抗体或VHH-Fc融合蛋白浓度为横坐标,相对光单位为纵坐标,以四参数模型对样品进行曲线拟合,得出四参数曲线如图7所示。Take out the Bio-Lite TM LuciferaseAssay System colorimetric solution from the -20℃ refrigerator in advance and dissolve it at room temperature. Take out the white plate from the incubator and equilibrate it at room temperature for about 8 minutes. Then add 70μL of colorimetric solution to each well, place it at room temperature away from light for 5 minutes, and read the plate as soon as possible. Use the Luminescence detection module on the SpectraMax multi-function microplate reader, set the PMT and Optics to 500, read the relative light units (RLU), and shake before reading the plate. With the antibody or VHH-Fc fusion protein concentration as the horizontal axis and the relative light unit as the vertical axis, the sample was curve-fitted using the four-parameter model, and the four-parameter curve was obtained as shown in Figure 7.
结果显示,双特异性抗体和VHH-Fc融合蛋白均能够有效阻断Jurkat-NFAT-PVRIG细胞表面表达PVRIG抗原与CHO-OKT3-PVRL2细胞表面高表达PVRL2的相互作用,促进T细胞的激活。Bi-VH1-94Y激活T细胞的EC50为35.34nM、Bi-VH1-94W为51.27nM、Bi-VH3-94Y为67.15nM,与VHH-Fc融合蛋白N1-94W-Fc(EC50=21.79nM)和N1-94Y-Fc(EC50=56.60nM)的阻断效果相当。The results showed that both the bispecific antibody and the VHH-Fc fusion protein could effectively block the interaction between the PVRIG antigen expressed on the surface of Jurkat-NFAT-PVRIG cells and the PVRL2 highly expressed on the surface of CHO-OKT3-PVRL2 cells, promoting the activation of T cells. The EC 50 of Bi-VH1-94Y for activating T cells was 35.34nM, Bi-VH1-94W was 51.27nM, and Bi-VH3-94Y was 67.15nM, which was comparable to the blocking effect of the VHH-Fc fusion proteins N1-94W-Fc (EC 50 = 21.79nM) and N1-94Y-Fc (EC 50 = 56.60nM).
实施例8:双特异性抗体与TIGIT细胞活性实验Example 8: Bispecific Antibody and TIGIT Cell Activity Experiment
取适量双特异性抗体Bi-VH1-94Y、Bi-VH1-94W、Bi-VH3-94Y、Bi-VH3-94W用RPMI 1640培养基稀释至700nM作为起始浓度,抗体与RPMI 1640培养基按照1:4倍数稀释,共得到9个系列稀释浓度。Take an appropriate amount of bispecific antibodies Bi-VH1-94Y, Bi-VH1-94W, Bi-VH3-94Y, and Bi-VH3-94W and dilute them to 700 nM with RPMI 1640 medium as the starting concentration. The antibodies and RPMI 1640 medium were diluted in a 1:4 ratio to obtain a total of 9 serial dilution concentrations.
取生长状态良好的CHO-K1-CD155细胞(构建方法参考专利CN111748580A实施例1中sAPC细胞株的构建)离心弃上清,用含10%FBS的RPMI 1640培养基重悬细胞,计数,将细胞配制成1×105cells/mL密度的细胞悬液,以100μL/孔(此时细胞数为1×104cells/孔)加入96孔白色板,边孔补加无菌水,置于5%CO2、37℃培养箱过夜孵育。CHO-K1-CD155 cells in good growth state (the construction method refers to the construction of sAPC cell line in Example 1 of patent CN111748580A) were centrifuged and the supernatant was discarded. The cells were resuspended in RPMI 1640 medium containing 10% FBS, counted, and the cells were prepared into a cell suspension with a density of 1×10 5 cells/mL. 100 μL/well (the cell number at this time was 1×10 4 cells/well) was added to a 96-well white plate, and sterile water was added to the side wells. The plate was placed in a 5% CO 2 , 37°C incubator for overnight incubation.
取生长状态良好的Jurkat-TIGIT细胞离心弃上清,用含10%FBS的RPMI 1640培养基重悬细胞,计数,将细胞配制成5.0×106cells/mL密度的细胞悬液,待用。将已经铺有CHO-K1-CD155细胞的96孔白色板从培养箱中取出,弃上清液,接着往96孔白色板的第2~11列,B~H行各加入40μL/孔的抗体稀释液、40μL/孔的Jurkat-TIGIT细胞悬液(此时细胞数为2×105cells/孔),此时抗体终浓度最大值为350nM。边孔补加无菌水。将细胞板置于5%CO2、37℃培养箱中孵育6h。Take Jurkat-TIGIT cells that are growing well, centrifuge and discard the supernatant, resuspend the cells in RPMI 1640 medium containing 10% FBS, count the cells, and prepare a cell suspension with a density of 5.0×10 6 cells/mL for later use. Take out the 96-well white plate that has been plated with CHO-K1-CD155 cells from the incubator, discard the supernatant, and then add 40μL/well of antibody diluent and 40μL/well of Jurkat-TIGIT cell suspension to the 2nd to 11th columns and rows B to H of the 96-well white plate (the number of cells is 2×10 5 cells/well at this time), and the maximum final antibody concentration is 350nM at this time. Add sterile water to the side wells. Place the cell plate in a 5% CO 2 , 37°C incubator and incubate for 6h.
提前从-20℃冰箱中取出Bio-LiteTMLuciferase Assay System显色液,室温下溶解。将96孔白色板从培养箱中取出,室温平衡约8min,然后每孔中加入60μL显色液,室温避光放置5min,尽快读板。用SpectraMax多功能酶标仪上的Luminescence检测模块,设置PMT and Optics为500,读取相对光单位(RLU)。以抗体浓度为横坐标,相对光单位为纵坐标,以四参数模型对样品进行曲线拟合,如图8所示。Take out the Bio-Lite TM Luciferase Assay System colorimetric solution from the -20℃ refrigerator in advance and dissolve it at room temperature. Take out the 96-well white plate from the incubator, equilibrate it at room temperature for about 8 minutes, then add 60μL of colorimetric solution to each well, place it at room temperature away from light for 5 minutes, and read the plate as soon as possible. Use the Luminescence detection module on the SpectraMax multi-function microplate reader, set PMT and Optics to 500, and read the relative light units (RLU). With the antibody concentration as the horizontal axis and the relative light unit as the vertical axis, the sample is curve-fitted using the four-parameter model, as shown in Figure 8.
结果显示,双特异性抗体Bi-VH1-94Y(EC50=1.42nM)、Bi-VH1-94W(EC50=1.68nM)、Bi-VH3-94Y(EC50=2.15nM),Bi-VH3-94W(EC50=1.71nM),均能够有效阻断Jurkat-TIGIT细胞表面表达TIGIT抗原与CHO-K1-CD155细胞表面高表达CD155的相互作用,促进T细胞的激活。The results showed that the bispecific antibodies Bi-VH1-94Y (EC 50 = 1.42nM), Bi-VH1-94W (EC 50 = 1.68nM), Bi-VH3-94Y (EC 50 = 2.15nM), and Bi-VH3-94W (EC 50 = 1.71nM) could effectively block the interaction between TIGIT antigen expressed on the surface of Jurkat-TIGIT cells and CD155 highly expressed on the surface of CHO-K1-CD155 cells, thereby promoting the activation of T cells.
实施例9:检测双特异性抗体的NK细胞活性Example 9: Detection of NK cell activity of bispecific antibodies
往500mL的RPMI 1640培养基中加入55mLFBS作为检测用稀释液。取适量双特异性抗体Bi-VH1-94W、Bi-VH3-94W,VHH-Fc融合蛋白N1-94W-Fc以及抗体h10D8OF。样品组为Bi-VH1-94W、Bi-VH3-94W,对照组为N1-94W-Fc、抗体h10D8OF、N1-94W-Fc+抗体h10D8OF(其中N1-94W-Fc和抗体h10D8OF的添加量分别与单独的N1-94W-Fc和抗体h10D8OF浓度一样)、hIgG1(北京义翘神州科技股份有限公司,货号:MA14OC2903)。样品组和对照组在96孔V型板中分别用检测用稀释液稀释至200nM作为起始浓度,用检测用稀释液进行100倍梯度稀释,共得到3个系列稀释浓度。Add 55 mL of FBS to 500 mL of RPMI 1640 medium as a diluent for detection. Take appropriate amounts of bispecific antibodies Bi-VH1-94W, Bi-VH3-94W, VHH-Fc fusion protein N1-94W-Fc, and antibody h10D8OF. The sample groups are Bi-VH1-94W and Bi-VH3-94W, and the control groups are N1-94W-Fc, antibody h10D8OF, N1-94W-Fc+antibody h10D8OF (where the added amounts of N1-94W-Fc and antibody h10D8OF are the same as those of N1-94W-Fc and antibody h10D8OF alone), and hIgG1 (Beijing Sino Biological Technology Co., Ltd., Cat. No.: MA14OC2903). The sample group and the control group were diluted to 200 nM as the starting concentration with the detection diluent in a 96-well V-shaped plate, and then 100-fold gradient dilution was performed with the detection diluent to obtain 3 serial dilution concentrations.
取状态良好的PBMC细胞转移到六孔板或细胞培养瓶37℃培养4h,离心弃去上清,用含10%FBS的RPMI 1640培养基重悬细胞使其密度为4×106cells/mL,按照100μL/孔加入96孔U型板(康宁,货号:7007),此时细胞数为4×105cells/孔,每孔加入50μL对应浓度的抗体或VHH-Fc融合蛋白样品并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为66.7nM。将96孔U型板置于5%CO2、37℃培养箱孵育4h。Take the PBMC cells in good condition and transfer them to a six-well plate or cell culture flask and culture them at 37°C for 4 hours. Centrifuge and discard the supernatant. Resuspend the cells with RPMI 1640 medium containing 10% FBS to a density of 4×10 6 cells/mL. Add 100 μL/well to a 96-well U-shaped plate (Corning, Cat. No.: 7007). At this time, the number of cells is 4×10 5 cells/well. Add 50 μL of the corresponding concentration of antibody or VHH-Fc fusion protein sample to each well and mix well. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein is 66.7 nM. Place the 96-well U-shaped plate in a 5% CO 2 , 37°C incubator and incubate for 4 hours.
取生长状态良好的K562细胞(高表达PVRL2和PVR)离心弃去上清,用含10%FBS的RPMI 1640培养基重悬细胞使其密度为1×107cells/mL。取出已孵育4h的96孔U型板,每孔加入50μLK562细胞并混匀,此时抗体或VHH-Fc融合蛋白终浓度最大值为50nM。将96孔U型板置于5%CO2、37℃培养箱孵育21h。Take K562 cells (highly expressing PVRL2 and PVR) with good growth status, centrifuge and discard the supernatant, resuspend the cells in RPMI 1640 medium containing 10% FBS to a density of 1×10 7 cells/mL. Take out the 96-well U-shaped plate that has been incubated for 4 hours, add 50 μL of K562 cells to each well and mix well. At this time, the maximum final concentration of the antibody or VHH-Fc fusion protein is 50 nM. Place the 96-well U-shaped plate in a 5% CO 2 , 37°C incubator and incubate for 21 hours.
将96孔U型板离心去掉上清,用含2%FBS的PBS洗涤后去掉上清以进行下一步的孵育。按照1:500稀释比例向含2%FBS的PBS中同时加入Anti-CD3 APC(购自BioLegend,货号344812),Anti-NKp46 BV421(购自BioLegend,货号331914)和anti-CD137 PE(购自BioLegend,货号309804),得到荧光二抗稀释液。除了空白孔外每孔加入100μL的荧光二抗稀释液重悬细胞,置于4℃冰箱中避光孵育25min。孵育完成后将96孔U型板离心去掉上清,用含2%FBS的PBS洗涤,最后用含2%FBS的PBS按照每孔150μL体积重悬。用流式细胞仪收集细胞,检测细胞表面结合的荧光抗体,得到原始数据MFI值。最后得到的结果以抗体浓度为横坐标,以NK细胞的百分比为纵坐标用四参数模型进行曲线拟合,得到抗体剂量依赖性的结合曲线,如图9所示。The 96-well U-shaped plate was centrifuged to remove the supernatant, and the supernatant was removed after washing with PBS containing 2% FBS for the next incubation. Anti-CD3 APC (purchased from BioLegend, item number 344812), Anti-NKp46 BV421 (purchased from BioLegend, item number 331914) and anti-CD137 PE (purchased from BioLegend, item number 309804) were added to PBS containing 2% FBS at a dilution ratio of 1:500 to obtain a fluorescent secondary antibody dilution solution. 100 μL of fluorescent secondary antibody dilution solution was added to each well except the blank well to resuspend the cells, and placed in a 4°C refrigerator in the dark for 25 minutes. After the incubation is completed, the 96-well U-shaped plate was centrifuged to remove the supernatant, washed with PBS containing 2% FBS, and finally resuspended with PBS containing 2% FBS according to a volume of 150 μL per well. Cells were collected by flow cytometry, and fluorescent antibodies bound to the cell surface were detected to obtain the raw data MFI value. The final result was obtained by fitting the curve using a four-parameter model with antibody concentration as the horizontal axis and the percentage of NK cells as the vertical axis to obtain the antibody dose-dependent binding curve, as shown in Figure 9.
结果显示,双特异性抗体Bi-VH1-94W和Bi-VH3-94W均能够有效地激活NK细胞,使得NK细胞表面的活化标志物CD137的表达分别是32.63%和35.88%,而hIgG1对照组只有22.45%。The results showed that the bispecific antibodies Bi-VH1-94W and Bi-VH3-94W were able to effectively activate NK cells, resulting in the expression of the activation marker CD137 on the surface of NK cells at 32.63% and 35.88%, respectively, while the hIgG1 control group was only 22.45%.
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