WO2024212817A1 - Polypeptide conjugate of chlorotoxin analogue and use thereof - Google Patents
Polypeptide conjugate of chlorotoxin analogue and use thereof Download PDFInfo
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- WO2024212817A1 WO2024212817A1 PCT/CN2024/084351 CN2024084351W WO2024212817A1 WO 2024212817 A1 WO2024212817 A1 WO 2024212817A1 CN 2024084351 W CN2024084351 W CN 2024084351W WO 2024212817 A1 WO2024212817 A1 WO 2024212817A1
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K47/00—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient
- A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/62—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being a protein, peptide or polyamino acid
- A61K47/64—Drug-peptide, drug-protein or drug-polyamino acid conjugates, i.e. the modifying agent being a peptide, protein or polyamino acid which is covalently bonded or complexed to a therapeutically active agent
- A61K47/6415—Toxins or lectins, e.g. clostridial toxins or Pseudomonas exotoxins
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/335—Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin
- A61K31/337—Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin having four-membered rings, e.g. taxol
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
- A61K38/16—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K45/00—Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K47/00—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient
- A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/62—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being a protein, peptide or polyamino acid
- A61K47/64—Drug-peptide, drug-protein or drug-polyamino acid conjugates, i.e. the modifying agent being a peptide, protein or polyamino acid which is covalently bonded or complexed to a therapeutically active agent
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
- A61P35/02—Antineoplastic agents specific for leukemia
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K1/00—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
- C07K1/04—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length on carriers
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K1/00—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
- C07K1/107—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length by chemical modification of precursor peptides
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K1/00—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
- C07K1/107—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length by chemical modification of precursor peptides
- C07K1/1072—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length by chemical modification of precursor peptides by covalent attachment of residues or functional groups
- C07K1/1077—General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length by chemical modification of precursor peptides by covalent attachment of residues or functional groups by covalent attachment of residues other than amino acids or peptide residues, e.g. sugars, polyols, fatty acids
Definitions
- the present invention belongs to the technical field of biopharmaceutical polypeptides, and specifically relates to a polypeptide conjugate of a chlorotoxin analog and its use in preparing a drug for preventing, treating and curing cancer-related diseases.
- Chlorotoxin is a 36-amino acid peptide extracted from the venom of the Israeli golden scorpion (Leiurus quinquestriatus). It contains 36 amino acid residues, including 4 disulfide bonds, and its amino acid sequence is:
- chlorotoxin is a chloride channel blocker that can specifically bind to tumor cells.
- chlorotoxin has been shown to pass through the blood-brain barrier. Again, chlorotoxin has good biocompatibility and has no obvious toxic effects on normal tissue cells.
- chlorotoxin is slowly metabolized in the body, providing researchers with ample time for imaging and treatment. Therefore, chlorotoxin can be used as a targeting agent to deliver cytotoxic agents and/or imaging agents to various tumors, including metastatic tumors and brain tumors such as malignant gliomas.
- chlorotoxin is mainly developed as a carrier to carry radioactive isotopes, fluorescent molecules, etc. into the tumor to achieve tumor imaging, so that the tumor tissue can be completely and accurately removed during surgery, and normal brain tissue can be retained to the greatest extent.
- Chlorotoxin as a carrier can also carry nanoparticles and drugs into the tumor, reducing the damage of drugs to other organs of the body and reducing side effects.
- the characteristics of chlorotoxin binding to brain glioma cells were first studied on 125I-labeled small peptides (125I-CTX) and 131I-labeled small peptides (131I-CTX).
- 125I-CTX can accumulate in the tumors of tumor-bearing mice, and 125I-CTX can specifically bind to glioma cells, but not to normal astrocytes.
- 131I-CTX is the most widely studied chlorotoxin complex, and the radiation it emits can be detected to identify and locate brain tumors.
- 131I and indocyanine green (ICG) labeled chlorotoxin have passed the US preclinical safety test and entered Phase II/I clinical trials respectively.
- chlorotoxin was found to bind to tumors of neuroectodermal origin (tumors that share an embryonic origin with cells of the central nervous system).
- chlorotoxin linked to biotin could bind to more than 200 biopsy samples of malignant gliomas and other tumors at different stages, including melanoma, neuroblastoma, medulloblastoma, and small cell lung cancer, but could not bind to normal tissues of the brain, skin, kidney, and lung.
- some fluorescent dyes such as Cy5.5, BLZ-100, and 800CW, can specifically target tumors in vivo after being linked to chlorotoxin.
- chlorotoxin can deliver nanoprobes, magnetic resonance imaging contrast agents, and therapeutic drugs to tumor tissues.
- chlorotoxin conjugates including fusion proteins, such as chlorotoxin-GST fusion proteins linked to saporin, have also been shown to significantly and selectively kill tumor cells.
- chlorotoxin-GST fusion proteins linked to saporin have also been shown to significantly and selectively kill tumor cells.
- chlorotoxin has the potential to be a carrier for the specific delivery of anticancer drugs to cancer cells. Chlorotoxin was shown to bind to glioma cells, but not to normal rat astrocytes and human rhabdomyosarcoma cell lines, and has great application prospects as a specific marker for selectively targeting new drugs and diagnosis (including grade determination) of human tumors.
- brain tumor should be intracranial tumor, which is divided into primary tumors in the brain and secondary tumors in other organs.
- Malignant glioma is a type of brain tumor and one of the most difficult types of cancer to treat. Commonly used methods include surgery, radiotherapy, chemotherapy and targeted drugs, but if recurrence occurs, the average survival time of patients is less than 12 months.
- BBB blood-brain barrier
- PTX paclitaxel
- BBB blood-brain barrier
- Chinese patent CN102844044A discloses a lysine chlorotoxin polypeptide with no more than one binding site.
- the provided lysine-reduced chlorotoxin polypeptide and/or its conjugate can be used in medicine (for example, in various treatment and/or diagnostic contexts).
- the present invention Based on the characteristics of chlorotoxin, the present invention provides a new polypeptide conjugate of chlorotoxin analogs, which is expected to develop a drug for brain tumors with good development prospects. Through artificial modification, it can give full play to its own advantages, further increase its stability and efficacy, and reduce toxicity.
- the purpose of the present invention is to provide a novel polypeptide conjugate of chlorotoxin analogues to address the unmet clinical needs in the treatment of malignant brain tumors.
- the present invention provides a polypeptide conjugate of a chlorotoxin analog, comprising a structure as shown in the following formula (I): Peptide-(Linker-Drug) m (I)
- Peptide is a polypeptide
- Linker is a linker
- Drug is an anticancer agent
- m is 1, 2 or 3;
- the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
- SEQ ID NO: 1 MCMPCFTTDHQMARKCDDCCGGKGRGKCYGPQCLCR;
- SEQ ID NO: 2 MCMPCFTTDHQMARRCDDCCGGRGRGRCYGPQCLCR;
- SEQ ID NO: 3 MCMPCFTTDHQMARKCDDCCGGRGRGRCYGPQCLCR;
- SEQ ID NO: 4 MCMPCFTTDHQMARRCDDCCGGKGRG RCYGPQCLCR;
- SEQ ID NO: 5 MCMPCFTTDHQMARRCDDCCGGRGRGKCYGPQCLCR;
- SEQ ID NO: 6 MCMPCFTTDHQMARRCDDCCGGKGRGKCYGPQCLCR;
- SEQ ID NO: 7 MCMPCFTTDHQMARACDDCCGGKGRGKCYGPQCLCR;
- SEQ ID NO: 8 NleCNlePCFTTDHQNleARRCDDCCGGRGRGKCYGPQCLCR.
- the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1, SEQ ID NO: 5, SEQ ID NO: 6, and SEQ ID NO: 7, and the amino acid sequence may be modified or unmodified.
- the amino acid sequence of the polypeptide may be modified, and the modification is selected from N-terminal acetylation and/or C-terminal amidation.
- the amino acid sequence of the polypeptide has at least 85% overall sequence identity with SEQ ID NO: 1 to SEQ ID NO: 8.
- the amino acid sequence of the polypeptide has at least 90% sequence identity with SEQ ID NO: 1 to SEQ ID NO: 8.
- the amino acid sequence of the polypeptide has at least 95% sequence identity with SEQ ID NO: 1 to SEQ ID NO: 8.
- the amino acid sequence of the polypeptide has at least one site that can be used for linking the sub-linker, and the site that can be used for linking the sub-linker is -NH2 and/or or -COOH.
- the amino acid sequence of the polypeptide has at least one site that can be used for linking a linker, and the -NH2 site that can be used for linking a linker is the -NH2 of a lysine side chain.
- the amino acid sequence of the polypeptide has at least one site that can be used for linking with a linker, and the -NH2 site that can be used for linking with a linker is the -NH2 of the methionine at the N-terminus of the peptide chain;
- the -NH2 site available for linker linkage corresponds to the 1st, 15th, 23rd and/or 27th position of the amino acid sequence of the polypeptide.
- the amino acid sequence of the polypeptide has at least one site that can be used for linking with a linker, and the -COOH site that can be used for linking with a linker is the -COOH of the side chain of aspartic acid or glutamic acid.
- the linker is independently selected from the following structures or any combination of the following structures:
- linker is independently selected from the following structures or any combination of the following structures -GALGLPG-.
- linker is independently selected from the following structures or any combination of the following structures -GALGLPG-.
- the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (II):
- Peptide is a polypeptide
- Drug is an anticancer agent
- n 1, 2 or 3;
- the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
- the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (III):
- Peptide is a polypeptide
- Drug is an anticancer agent
- n 1, 2 or 3;
- the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
- the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (IV):
- Peptide is a polypeptide
- Drug is an anticancer agent
- n 1, 2 or 3;
- the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
- the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (V):
- Peptide is a polypeptide
- Drug is an anticancer agent
- n 1, 2 or 3;
- the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
- the anticancer agent is selected from BCNU, cisplatin, gemcitabine, hydroxyurea, paclitaxel, temozolomide, topotecan, fluorouracil, vincristine, vinblastine, procarbazine, dacarbazine, hexamethylmelamine, methotrexate, mercaptopurine, thioguanine, fludarabine phosphate, cladribine, pentostatin, cytarabine, azacitidine, etoposide, teniposide, irinotecan, docetaxel, doxorubicin, daunorubicin, actinomycin D, idarubicin, plicamycin, Mitomycin, bleomycin, tamoxifen, flutamide, leuprolide, goserelin, aminoglutethimide, anastrozole, amsacrine, asparaginase, mitoxantrone, mit
- the anticancer agent in the polypeptide conjugate of the present invention is a poorly water-soluble compound.
- the anticancer agent may be further selected from the taxanes, which are considered to be effective drugs for treating solid tumors that are refractory to many other anti-tumor agents.
- the anticancer agent is preferably paclitaxel, docetaxel, or a combination thereof.
- the anticancer agent in the polypeptide conjugates of the present invention is maytansine and/or its analogs (eg, DM1).
- the polypeptide conjugate provided by the present invention is further substituted with a lipophilic substituent, wherein the lipophilic substituent can be independently selected from the following groups: q is any integer from 0 to 20; n is 12, 13, 14, 15, 16, 17, 18, 19 or 20. Further, n is 12, 14 or 16.
- the lipophilic substituent is directly linked to the polypeptide conjugate or can be linked to the polypeptide conjugate via a linker, and is independently selected from the following groups:
- the linker may be one of the above linkers or any combination thereof.
- polypeptide conjugate provided by the present invention is further substituted, and the substituents can be independently selected from the following groups:
- the present invention provides a polypeptide conjugate, wherein the structure of the polypeptide conjugate is selected from one of the following structures:
- the present invention also relates to a pharmaceutical composition comprising any one of the polypeptide conjugates of the present invention.
- the pharmaceutical composition described in the present invention further comprises at least one of a pharmaceutically acceptable carrier and/or excipient, a diluent, an adjuvant and a vehicle.
- the present invention relates to the use of the polypeptide conjugate or pharmaceutical composition in the preparation of a drug for preventing, treating, curing or alleviating cancer, wherein the drug is used for preventing, treating, curing or alleviating cancer.
- the cancer includes but is not limited to breast cancer, lung cancer, prostate cancer, kidney cancer, leukemia, ovarian cancer, gastric cancer, uterine cancer, endometrial cancer, liver cancer, colon cancer, thyroid cancer, pancreatic cancer, colorectal cancer, esophageal cancer, brain tumor, skin cancer, lymphoma, or multiple myeloma; preferably, the cancer is a brain tumor; further, the cancer is a glioma.
- the polypeptide-drug conjugate of chlorotoxin analog provided by the present invention utilizes a hydrophilic polypeptide to modify a hydrophobic anti-tumor drug, thereby improving the solubility of the drug.
- the polypeptide conjugate drug provided by the present invention has the characteristics of high activity, strong specific binding to the target, and obvious cellular endocytosis.
- Administration of the conjugate of the present invention to patients can increase the specificity for target cells (especially tumor cells), increase cellular internalization of cells, reduce cellular degradation of cells, increase accumulation at target sites, reduce accumulation in normal tissues, reduce its biological toxicity, overcome drug resistance, increase the biological activity of the drug and/or prevent, limit or eliminate adverse side effects, toxicity and ineffectiveness compared with the administration of the therapeutic agent alone (i.e., not as part of the conjugate of the present invention).
- Chlorotoxin has a good ability to penetrate the blood-brain barrier. After coupling anti-tumor drugs with it, the ability of drugs to penetrate the blood-brain barrier can be greatly increased, and it has a better effect on brain tumor indications.
- peptide or "polypeptide” is well known to those skilled in the art.
- a peptide or polypeptide is two or more amino acids linked by an amide bond, which is formed by the amino group of one amino acid and the carboxyl group of the adjacent amino acid.
- the polypeptides described herein may contain naturally occurring amino acids or non-naturally occurring amino acids. They may be modified into analogs, derivatives, functional mimetics, pseudopeptides, and the like containing at least two amino acids. Unless it is specified that the N-terminus or C-terminus has a specific modification, a polypeptide comprising a specific amino acid sequence includes unmodified and modified amino and/or carboxyl termini, which is well known to those skilled in the art.
- a polypeptide of a specific amino acid sequence may include modified amino acids and/or additional amino acids, unless the N- and/or C-terminus contain modifications that prevent further addition of amino acids. Such modifications include, for example, acetylation of the N-terminus and/or amidation of the C-terminus.
- polypeptides of the present invention can be modified to form polypeptide derivatives.
- various modifications can be made to the polypeptides. Typical modifications include, but are not limited to, N-terminal acetylation, C-terminal amidation, d-amino acid substitution, non-natural amino acid substitution, fatty acid modification, or a combination of the above modifications.
- the present invention includes any well-known modification of the polypeptide.
- the polypeptide derivatives may include chemical modifications to the polypeptide, such as alkylation, acylation, carbamylation, iodination, or any other modification that produces a polypeptide derivative.
- the modification of the polypeptide may include modified amino acids, for example, hydroxyproline or carboxyglutamic acid, and may include amino acids connected by non-peptide bonds.
- non-natural amino acids can be used to replace the natural amino acids in the polypeptide, including but not limited to 2-amino fatty acid (Aad), 3-amino fatty acid ( ⁇ Aad), ⁇ -alanine, ⁇ -aminopropionic acid ( ⁇ Ala), 2-aminobutyric acid (Abu), 4-aminobutyric acid, piperidine carboxylic acid (4Abu), 6-aminohexanoic acid (Acp), 2-aminoheptanoic acid (Ahe), 2-aminoisobutyric acid (Aib), 3-aminoisobutyric acid ( ⁇ Aib), 2-aminopimelic acid (Apm), 2,4-diaminobutyric acid (Dbu), desmosine (Des), 2,2'- Diaminopimelate (Dpm), 2,3-diaminopropionic acid (Dpr), N-ethylglycine (EtGly), N
- amino acid refers to a molecule containing an amino group and a carboxyl group. Suitable amino acids include, but are not limited to, the D- and L-isomers of naturally occurring amino acids, and non-naturally occurring amino acids prepared by organic synthesis or other metabolic pathways. As used herein, the term amino acid includes, but is not limited to, ⁇ -amino acids, natural amino acids, non-natural amino acids, and amino acid analogs.
- naturally occurring amino acid refers to any of the 20 L-amino acids commonly found in peptides synthesized in nature, i.e., the L-isomers of alanine (Ala or A), arginine (Arg or R), asparagine (Asn or N), aspartic acid (Asp or D), cysteine (Cys or C), glutamic acid (Glu or E), glutamine (Glu or Q), glycine (Gly or G), histidine (His or H), isoleucine (Ile or I), leucine (Leu or L), lysine (Lys or K), methionine (Met or M), phenylalanine (Phe or F), proline (Pro or P), serine (Ser or S), threonine (Thr or T), tryptophan (Trp or W), tyrosine (Tyr or Y), and valine (Val or V).
- Constant amino acid substitutions are amino acid substitutions in which an amino acid residue is replaced by an amino acid residue with a similar side chain. Families of amino acid residues with similar side chains have been defined in the art. These families include amino acids with basic side chains (e.g., K, R, H), acidic side chains (e.g., D, E), uncharged polar side chains (e.g., G, N, Q, S, T, Y, C), non-polar side chains (e.g., A, V, L, I, P, F, M, W), ⁇ -branched side chains (e.g., T, V, I), and aromatic side chains (e.g., Y, F, W, H).
- basic side chains e.g., K, R, H
- acidic side chains e.g., D, E
- uncharged polar side chains e.g., G, N, Q, S, T, Y, C
- non-polar side chains e.g., A, V,
- a predicted non-essential amino acid residue in a polypeptide is preferably replaced by another amino acid residue from the same side chain family.
- Other examples of acceptable substitutions are substitutions based on isosteric considerations (e.g., norleucine replacing methionine) or other properties (e.g., 2-thienylalanine replacing phenylalanine).
- polypeptides of the present invention can be prepared using methods well known to those skilled in the art, including well-known chemical synthesis methods. Therefore, when a polypeptide or its derivatives contain one or more non-standard amino acids, it is very likely to be prepared by chemical synthesis. In addition to using chemical synthesis methods to prepare polypeptides or their derivatives, they can also be prepared by expressing encoding nucleic acids. This is particularly applicable to the preparation of polypeptides or their derivatives containing only natural amino acids.
- nucleic acid encoding polypeptide sequences can be used (see Sambrook et al., Molecula r Cloning: A Labora tory Manual, Third Ed., Cold Spring Harbor Laboratory, New York (2001); Ausubel et al., Current Protocols in Molecular Biology, John Wiley and Sons, Baltimore, MD (1999)).
- the polypeptide can be expressed in an organism and purified by well-known purification techniques.
- an analog refers to a substance that shares one or more specific structural features, elements, components or parts with a reference substance. Typically, an “analog” shows significant structural similarity to a reference substance, such as a shared core or shared structure, and also differs in certain discrete ways.
- an analog is a substance that can be produced from a reference substance, for example, by chemical manipulation of the reference substance.
- an analog is a substance that can be produced by the conduction of a synthetic process that is substantially similar to (e.g., shares multiple steps with) the synthetic process that produces the reference substance.
- an analog is or can be produced by the conduction of a synthetic process that is different from the synthetic process used to produce the reference substance.
- chlorotoxin analog refers to a polypeptide having an amino acid sequence that exhibits at least 45% identity to the amino acid sequence of an appropriate reference chlorotoxin (e.g., the amino acid sequence of SEQ ID NO: 1 or a related fragment thereof).
- the chlorotoxin polypeptide has an amino acid sequence that exhibits at least 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100% identity to SEQ ID NO: 1 or a related fragment thereof.
- the chlorotoxin analog has the same amino acid sequence as SEQ ID NO: 1. In some embodiments, the chlorotoxin analog is a chlorotoxin variant because it has an amino acid sequence different from the amino acid sequence of SEQ ID NO: 1 or its related fragments. In some embodiments, the chlorotoxin variant has an amino acid sequence that is different from SEQ ID NO: 1 or its related fragments at no more than 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 positions. In some embodiments, the related fragments of SEQ ID NO: 1 contain at least 5 adjacent residues of SEQ ID NO: 1.
- the related fragments of SEQ ID NO: 1 contain a range of 5 to 25 amino acids, and the range of amino acids has at least 45% sequence identity with the corresponding range of SEQ ID NO: 1.
- chlorotoxin analogs suitable for use in the practice of the present invention are described in International Application WO2003/101474 (the entire contents of which are incorporated herein by reference). Specific examples include polypeptides comprising or consisting of SEQ ID NO. 1 or SEQ ID NO. 8, as well as variants thereof, etc.
- sequence identity is calculated by sequence alignment.
- sequence alignment In order to determine the percent identity of two amino acid sequences, the sequences are aligned for optimal comparison. For example, a gap can be introduced in the sequence of the first amino acid sequence so as to optimally align with the second amino acid sequence. The amino acid residues at the corresponding amino acid positions are then compared. When the position in the first sequence is occupied by the same amino acid residue at the corresponding position in the second sequence, the molecules are identical at that position.
- the sequences can be the same length or can be different lengths.
- the optimal sequence alignment for determining the comparison window can be performed by the local homology algorithm of Smith and Waterman (J. Theor. Biol., 1981), by the homology alignment algorithm of Needleman and Wunsch (J. Mol. Biol, 1972), by the method of Pearson and Lipman to find similarity (Proc. Natl. Acad. Sci. U.S.A., 1988), by computerized implementation of these algorithms (GAP, BESTFIT, FASTA and TFASTA in Wisconsin Genetics Software Package Version 7.0, Genetic Computer Group, 575, Science Drive, Madison, Wisconsin) or, for example, using publicly available computer software such as BLAST. When using such software, it is preferred to use default parameters, such as gap penalties or extension penalties.
- the optimal alignment produced by various methods i.e., the highest identity percentage produced within the entire comparison window range) is selected.
- cancer refers to a disease, disorder or condition in which cells exhibit relatively abnormal, uncontrolled and/or autonomous growth, such that they exhibit abnormally elevated proliferation rates and/or abnormal growth phenotypes, characterized by a significant loss of control over cell proliferation.
- the characteristic of cancer may be one or more tumors.
- cancer may be or include precancerous (e.g., benign), malignant, pre-metastatic, metastatic and/or non-metastatic cells.
- the characteristic of a related cancer may be a solid tumor.
- the characteristic of a related cancer may be a blood tumor.
- examples of different types of cancer known in the art include, for example, cancers of the hematopoietic system, including leukemias, lymphomas (Hodgkin's and non-Hodgkin's lymphomas), myelomas and myeloproliferative disorders; sarcomas, melanomas, adenomas, solid tissue cancers, squamous cell carcinomas of the oral cavity, pharynx, larynx and lung, liver cancer, genitourinary cancers (such as prostate cancer, cervical cancer, bladder cancer, uterine cancer, endometrial cancer and renal cell carcinoma), bone cancer, pancreatic cancer, skin cancer, cutaneous or intraocular melanoma, cancers of the endocrine system, thyroid cancer, parathyroid cancer, head and neck cancer, brain tumors, breast cancer, gastrointestinal cancer and nervous system cancers, benign lesions (such as papilloma), and the like.
- leukemias including leukemias, lymphomas (
- anticancer agent has its art-understood meaning and refers to one or more pro-apoptotic, cytostatic and/or cytotoxic agents, for example, particularly including agents used and/or recommended for the treatment of one or more diseases, disorders or conditions associated with undesirable cell proliferation.
- the anticancer agent can be or include one or more alkyl agents, one or more anthracyclines, one or more cytoskeletal disruptors (e.g., microtubule targeting moieties such as taxanes, maytansine and their analogs), one or more epothilones, one or more histone deacetylase inhibitors HDAC, one or more topoisomerase inhibitors (e.g., inhibitors of topoisomerase I and/or topoisomerase II), one or more kinase inhibitors, one or more nucleotide analogs or nucleotide precursor analogs, one or more peptide antibiotics, one or more platinum-based agents, one or more retinoids, one or more vinca alkaloids, and/or one or more analogs of one or more of the following (i.e., sharing relevant antiproliferative activity).
- cytoskeletal disruptors e.g., microtubule targeting moieties such as taxanes, maytansine and
- the anticancer agent can be or include one or more of the following: BCNU, Actinomycin, all-trans retinoic acid, auristatin, azacitidine, azathioprine, bleomycin, bortezomib, carboplatin, capecitabine, cisplatin, chlorambucil, ambucil), cyclophosphamide, curcumin, cytarabine, daunorubicin, docetaxel, doxifluridine, doxorubicin, epirubicin, epothilone, etoposide, fluorouracil, Gemcitabine, Hydroxyurea, Idarubicin, Imatinib, Irinotecan, Maytansine and/or their analogs (e.g., DM1), Mechlorethamine, Mercaptopurine, Methotrexate, Mitoxantrone, Maytansine
- the invention relates to vinblastine,
- composition refers to a pharmaceutical composition comprising a therapeutically effective amount of a polypeptide of the present invention and a pharmaceutically acceptable carrier or excipient.
- a pharmaceutically acceptable carrier or pharmaceutically acceptable excipient includes any and all solvents, dispersion media, coatings, antibacterial and antifungal agents, isotonic and absorption delaying agents, and physiologically compatible analogs.
- pharmaceutically acceptable carriers or excipients include one or more of the following: water, saline, phosphate buffered saline, glucose, glycerol, ethanol, and the like, and combinations thereof.
- compositions preferably in the composition it includes an isotonic agent, for example, a sugar, a polyol, such as mannitol, sorbitol, or sodium chloride.
- an isotonic agent for example, a sugar, a polyol, such as mannitol, sorbitol, or sodium chloride.
- Pharmaceutically acceptable substances may also be included, such as a wetting amount or a trace amount of auxiliary substances, such as a wetting or emulsifier, preservative, or buffer that increases the shelf life and effectiveness of the antibody or antibody portion.
- a disintegrant may be included, such as cross-linked polyvinyl pyrrolidone, agar, alginic acid or a salt thereof, such as sodium alginate.
- pharmaceutical compositions may also include one or more of the following: carrier proteins such as serum albumin, buffers, binders, sweeteners and other flavoring agents; colorants and polyethylene glycol.
- the composition can be in many forms, for example, liquid, semisolid and solid dosage forms, such as liquid solutions (such as injectable solutions and infusible solutions), dispersions or suspensions, tablets, pills, powders, liposomes and suppositories.
- liquid solutions such as injectable solutions and infusible solutions
- dispersions or suspensions tablets, pills, powders, liposomes and suppositories.
- the mode of administration is parenteral (e.g., intravenous, subcutaneous, intraperitoneal, intramuscular), in one embodiment, the polypeptide is administered by intravenous injection or infusion. In another embodiment, the polypeptide is administered by intramuscular or subcutaneous injection.
- Suitable routes of administration for the pharmaceutical composition include, but are not limited to, rectal, transdermal, vaginal, transmucosal or enteral administration.
- protecting groups that can be used for this purpose include, but are not limited to, tert-butyloxycarbonyl (t-Boc) and benzoyloxy) groups for protecting amine groups; and simple esters (such as methyl and ethyl) and esters for protecting carboxyl groups.
- the protecting groups can usually be subsequently removed by treatment that leaves the peptide bonds intact (e.g., treatment with dilute acid).
- Peptides can be synthesized by sequentially adding amino acids to a growing peptide chain.
- liquid and solid phase peptide synthesis methods are applicable.
- solid phase peptide synthesis methods the growing peptide chain is usually connected to an insoluble matrix (such as, for example, polystyrene beads) by connecting the C-terminal amino acid to the matrix.
- a shearing agent that does not destroy the peptide bonds such as hydrofluoric acid (HF), can be used to release the peptide from the matrix.
- HF hydrofluoric acid
- automated, high throughput, and/or parallel peptide synthesis methods can also be used.
- peptide synthesis methods see, e.g., Merrifield (1969) "Solid-phase peptide synthesis,” Adv Enzymol Relat Areas Mol Biol., 32: 221-96; Fridkin et al. (1974) Annu Rev Biochem., 43(0): 419-43; Merrifield (1997) "Concept and Early Development of Solid Phase Peptide Synthesis," Methods in Enzymology, 289: 3-13; Sabatino et al. (2009) “Advances inautomatic, manual and microwave-assisted solid-phase peptide synthesis," CurrOpin Drug Discov Devel., 11(6): 762-70, the entire contents of each of which are incorporated herein by reference.
- polypeptides disclosed in the present invention may also exist in the form of their hydrates or in the form of containing their solvents (e.g., ethanol, DMSO, etc.), and may be used for crystallization.
- solvents e.g., ethanol, DMSO, etc.
- the compounds disclosed in the present invention may inherently or by design form solvates with pharmaceutically acceptable solvents (including water); therefore, the compounds of the present invention include solvated and unsolvated forms.
- Figure 11 Killing curve of some PDC molecules of the present invention on brain glioma cells U87-MG in Test Example 1;
- Figure 12 Killing curve of U373 glioma cells of some PDC molecules of the present invention in Test Example 1;
- Figure 13 Statistical results of the average fluorescence signal of the cells in the brain glioma cells U87-MG 4 hours after the internalization of the polypeptide molecules in Test Example 2;
- Figure 14 Statistical results of the average fluorescence signal of the cells in U373 glioma cells of test example 2 after endocytosis of the polypeptide molecule for 4 hours;
- Figure 15 Statistical results of the average fluorescence signal of the cells in the brain glioma cells U87-MG after 24 hours of endocytosis of the polypeptide molecules in Test Example 2;
- Figure 16 Statistical results of the average fluorescence signal of the cells in U373 glioma cells of test example 2 after 24 hours of endocytosis of the polypeptide molecule;
- Figure 17 Confocal imaging results of the endocytosis of polypeptide molecules (3uM) by U87-MG glioma cells in Test Example 2 after 4 hours;
- Figure 18 Confocal imaging results of U373 glioma cells in test example 2 after endocytosis of polypeptide molecules (3uM) for 4 hours;
- Figure 19 Confocal imaging results of the endocytosis of polypeptide molecules (1uM) by U87-MG glioma cells in Test Example 2 after 24 hours;
- Figure 20 Confocal imaging results of U373 glioma cells in test example 2 after endocytosis of polypeptide molecules (1uM) for 24 hours;
- Test Example 3 Results of the human plasma stability test of some PDC molecules of the present invention
- FIG22 Test Example 4: Results of mouse plasma stability test of some PDC molecules of the present invention.
- Figure 23 In vitro evaluation results of peptide molecules penetrating the blood-brain barrier in Test Example 5;
- Figure 24 Drug-time curve of compound 24, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
- Figure 25 Drug-time curve of compound 25, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
- Figure 26 Drug-time curve of compound 26, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
- Figure 27 Drug-time curve of compound 27, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
- Figure 28 AUC blood-brain ratio calculation results.
- the polypeptide compounds and derivatives provided by the present invention are synthesized by solid phase synthesis method to synthesize their linear precursors, and the synthetic carrier is Rink Amide-AM Resin resin.
- the Rink Amide-AM Resin resin is first fully swollen in N,N-dimethylformamide (DMF), and then the solid phase carrier and the activated amino acid derivative are repeatedly condensed ⁇ washed ⁇ Fmoc protection ⁇ washed ⁇ the next round of amino acid condensation to achieve the desired length of the synthesized polypeptide chain, and then the N-terminal amidation is completed on the solid phase, AEEA and FITC are coupled or tetradecanedioic acid is coupled, and then a mixed solution of trifluoroacetic acid: water: triisopropylsilane: anisyl thioether (90: 2.5: 2.5: 5:, v: v: v: v) is reacted with the resin to cleave the polypeptid
- the crude straight-chain precursor after cleavage is subjected to disulfide bond oxidation in a weakly alkaline solution, and then purified and separated by a C-18 reverse phase preparative chromatography column using a 0.1% trifluoroacetic acid acetonitrile/water system to obtain an oxidized polypeptide.
- the obtained oxidized polypeptide is coupled with a PTX conjugate in a liquid phase, and after the reaction, it is purified and separated by a C-18 reverse phase preparative chromatography column using a 0.1% trifluoroacetic acid acetonitrile/water system to obtain a pure polypeptide and its derivatives.
- Step 1 Synthesis of linear precursor peptide chain
- the linear precursor peptide chain of compound 1 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- Step 2 Cleavage of the linear precursor peptide chain
- Step 5 Detection and characterization methods
- the purified polypeptide from step 4 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and intramolecular disulfide bond formation of the compound.
- Step 1 Synthesis of linear precursor peptide chain
- the linear precursor peptide chain of compound 3 is M(Boc)-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K(Mtt)-C-Y-G-P-Q-C-L-C-R
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- the resin was washed 5 times with DMF and 5 times with DCM.
- Step 2 Coupling of AA27 lysine side chain with AEEA and FITC
- Removal of the Mtt protecting group of the lysine side chain After swelling the resin with DCM for 1 h, add a mixed solution of hexafluoroisopropanol/dichloromethane (30% v/v, 10 mL) to the resin, shake the reaction at room temperature for 45 minutes and then remove the solution. Repeat the operation once. After the reaction, rinse the resin with DCM 5 times and DMF 6 times.
- Lysine side chain coupling AEEA Weigh 1.0mmol Fmoc-AEEA-OH, 1.0mmol ethyl 2-oximecyanoacetate and dissolve in 8mL DMF, then add 160uLDIC for pre-activation for 3min, then add the mixed solution to the resin obtained in the previous step and shake for 3h. After the reaction, drain the reaction solution and wash with DMF 4-5 times.
- N-terminal coupling of AEEA with FITC Weigh 0.4 mmol FITC and dissolve it in 5 mL DMF, add 1.0 mmol DIEA, and then add the mixed solution to the resin obtained in the previous step, and shake it in the dark for 5 hours. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times until the discharged liquid is colorless, and rinse the resin with DCM 5 times. The resin is drained in a vacuum.
- Step 3 Cleavage of the linear precursor peptide chain
- Step 6 Detection and characterization methods
- the purified peptide from step 6 was subjected to analytical HPLC and LC/MS to determine the purity and compound completion of K27 side-linking AEEA and FITC, as well as the formation of intramolecular disulfide bonds.
- Step 1 Synthesis of linear precursor peptide chain
- the linear precursor peptide chain of compound 17 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-R-G-R-G-K-C-Y-G-P-Q-C-L-C-R
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- acetylation reagent Dissolve 500uL of acetic anhydride and 500uL of DIEA in 9mL of DMF. Add 10mL of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
- Step 3 Cleavage of the linear precursor peptide chain
- Step 5 Purification and preparation of oxidized peptides
- the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile).
- the chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-40% acetonitrile in 40min.
- the product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
- Step 8 Peptide coupling to PTX conjugate
- Step 9 Purification of target peptide
- the purified peptide from step 9 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and compound completion of N-terminal acetylation, K27 side-linked PTX conjugate, and formation of intramolecular disulfide bonds.
- the test results are shown in Figures 1 and 2.
- Step 1 Synthesis of linear precursor peptide chain
- the linear precursor peptide chain of compound 20 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- Step 3 Cleavage of the linear precursor peptide chain
- Step 5 Purification and preparation of oxidized peptides
- the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile).
- the chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-50% acetonitrile in 40min.
- the product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
- Purification method dissolve the sample in DMSO: acetonitrile 1:1, purify it with a C18 reverse phase column, and purify it with a gradient of 50-90% (the mobile phase is pure water and pure acetonitrile, without TFA)
- Step 8 Peptide coupling to PTX conjugate
- Step 9 Purification of target peptide
- step 9 The purity of the peptide in step 9 was determined by analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to confirm that the compound completed N-terminal acetylation, K23, K27 side-linked PTX conjugates, and formed intramolecular disulfide bonds.
- the test results are shown in Figures 3 and 4.
- Step 1 Synthesis of linear precursor peptide chain
- the linear precursor peptide chain of compound 21 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- acetylation reagent Dissolve 500uL of acetic anhydride and 500uL of DIEA in 9mL of DMF. Add 10mL of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
- Step 3 Cleavage of the linear precursor peptide chain
- Step 5 Purification and preparation of oxidized peptides
- the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile).
- the chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-50% acetonitrile in 40min.
- the product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
- Step 8 Peptide coupling to PTX conjugate
- Step 9 Purification of target peptide
- the purified peptide from step 9 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and compound completion of N-terminal acetylation, K15, K23, K27 side-linked PTX conjugates, and formation of intramolecular disulfide bonds.
- the detection spectra are shown in Figures 5 and 6.
- Step 1 Synthesis of linear precursor peptide chain
- the linear precursor peptide chain of compound 23 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-R-G-R-G-K-C-Y-G-P-Q-C-L-C-R
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- acetylation reagent 500uL of acetic anhydride and 500uL of DIEA dissolved in 9mL of DMF. Add the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
- Step 3 Cleavage of the linear precursor peptide chain
- Step 5 Purification and preparation of oxidized peptides
- the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile).
- the chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-40% acetonitrile in 40min.
- the product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
- Paclitaxel (0.950 g, 1.8 mmol) and 4-nitrophenyl carbonate (2.28 g, 7.49 mmol) were dissolved in 5 mL DMF, and DIEA (1.63 mL, 9.36 mmol) was added and stirred at room temperature for 1 h.
- the reaction results were monitored by LC-MS.
- the product was purified by C18 reverse phase chromatography column and freeze-dried to obtain Compound 1. Purification method: The sample was dissolved in DMSO: acetonitrile in a ratio of 1:1, and purified by C18 reverse phase chromatography column with a gradient of 40-90% (the mobile phase was pure water and pure acetonitrile without TFA).
- Step 7 Peptide coupling to PTX conjugate
- Step 8 Purification of target peptide
- the purified peptide from step 9 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and compound completion of N-terminal acetylation, K27 side-linked PTX conjugate, and formation of intramolecular disulfide bonds.
- the test results are shown in Figures 7 and 8.
- Step 1 Synthesis of linear precursor peptide chain
- Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
- the resin was washed 6-8 times with DMF until neutral pH.
- the resin was washed 4-6 times with DMF before coupling the next amino acid.
- acetylation reagent Dissolve 500uL of acetic anhydride and 500uL of DIEA in 9mL of DMF. Add 10mL of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
- Step 3 Coupling of AA15 lysine side chain to tetradecanedioic acid
- Removal of Mtt protecting group of lysine side chain After swelling the resin with DCM for 1h, add hexafluoroisopropanol/dichloromethane mixed solution (30% v/v, 10mL) to the resin, shake and react at room temperature for 45 minutes, then remove, repeat the operation once, and wash the resin with DMF 6 times after the reaction.
- Coupling of lysine side chain with tetradecanedioic acid weigh 1.0mmol tetradecanedioic acid, 1.0mmol ethyl 2-oximecyanoacetate and dissolve in 8mL DM, then add 160uL DIC for pre-activation for 3min, then add the mixed solution to the resin obtained in the previous step, shake and react for 3h. After the reaction, drain the reaction solution and wash with DMF 4-5 times.
- Step 4 Cleavage of the linear precursor peptide chain
- Step 6 Purification and preparation of oxidized peptides
- the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile).
- the chromatographic column was a BR C-18 (Saifen) reversed-phase column.
- the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 25-50% acetonitrile in 40min.
- the product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
- Step 8 Synthesis of 2-NHS-Succinyl PTX
- Purification method dissolve the sample in DMSO: acetonitrile 1:1, purify it with a C18 reverse phase column, and purify it with a gradient of 50-90% (the mobile phase is pure water and pure acetonitrile, without TFA)
- Step 9 Peptide coupling to PTX conjugate
- Step 10 Purification of target peptide
- step 9 The purity of the peptide in step 9 was determined by analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to confirm that the compound had completed N-terminal acetylation, K15 was linked to tetradecanedioic acid, K23, K27 were linked to PTX conjugates, and intramolecular disulfide bonds were formed.
- the detection spectra are shown in Figures 9 and 10.
- the invention evaluates the killing effect of PDC molecules on two types of brain glioma cells, U87-MG and U373, by measuring the killing experiment IC50.
- U373 cells (Fenghui Biotechnology); U87-MG cells (Punosai); FBS (EXCELL); DMEM (SIGMA); MEM (SIGMA); P/S solution 100x (homemade); trypsin (Gibco); EDTA (SIGMA); DPBS (homemade); 96-well black transparent bottom cell plate (Aligent); Celltiter-blue (Promega); DMSO (aladdin).
- U87-MG cells were cultured and grown in culture medium (MEM, 10% FBS, 1% P/S).
- culture medium MEM, 10% FBS, 1% P/S.
- the cells were first rinsed with DPBS, and then digested with 0.25% trypsin (containing 0.5mM EDTA); the cell suspension was collected into a centrifuge tube, centrifuged at 1000rpm for 3min, and the supernatant culture medium was removed; 6-8mL of fresh growth medium was added to resuspend the cells, and the cells were passaged at a ratio of 1:3 to 1:8, and cultured in a 37°C, 5% CO 2 incubator. After passage, the medium was changed or passaged every 2-3 days.
- U373 cells were cultured and grown in culture medium (DMEM, 10% FBS, 1% P/S). When the cell growth density reaches 80-90% of the culture flask, rinse the cells with DPBS first, then digest the cells with 0.25% trypsin (containing 0.5mM EDTA); collect the cell suspension into a centrifuge tube, centrifuge at 1000rpm for 3min, remove the supernatant medium; add 6-8mL of fresh growth medium to resuspend the cells, subculture at a ratio of 1:3 to 1:8, and culture in a 37°C, 5% CO2 incubator. After subculture, change the medium or subculture every 2-3 days.
- culture medium DMEM, 10% FBS, 1% P/S.
- U373 cells and U87-MG cells were subcultured and expanded to the required cell number, the cells were digested and centrifuged to collect the cell pellet, the cells were resuspended in an appropriate amount of complete medium, the cell viability was detected and counted, and the cell concentration was adjusted to 2 ⁇ 104 cells/mL with complete medium.
- 100 ⁇ L/well was inoculated into the middle well of the 96-well plate, and the edge wells were filled with the same volume of 100 ⁇ L/well DPBS, and incubated in a 37°C, 5% CO 2 incubator overnight.
- PDC drug was dissolved to 1 mM using sterile water or DMSO.
- the PDC drug was diluted with the growth medium of U373 cells and U87-MG cells to a concentration of 1 ⁇ M (2 ⁇ concentration), and then diluted 5-fold using the growth medium of the corresponding cells, for a total of 9 concentrations (500 nM-0.00128 nM).
- the IC50 results of the tumor cell killing experiment of some PDC molecules of the present invention are shown in Table 1, and the killing curves of two types of brain glioma cells, U87-MG and U373, are shown in Figures 11 and 12.
- ANG-1005 is a brain-penetrating peptide-drug conjugate.
- ANG-1005 is a taxane derivative consisting of three paclitaxel molecules covalently linked to Angiopep-2 (structure shown below), designed to cross the blood-brain and blood-brain-spinal cord barriers via the low-density lipoprotein receptor-related protein (LRP1) transport system and penetrate malignant cells.
- LRP1 low-density lipoprotein receptor-related protein
- the experimental results show that the PDC molecule of the present invention has a good killing effect on tumor cells U87-MG and U373.
- Test Example 2 Fluorescence imaging to detect the endocytosis effect of peptides in U87-MG and U373 cells
- peptides designed and synthesized by the company 96-well black transparent cell plates (Aligent); fixative (Biyuntian); DAPI (Biyuntian); DPBS (homemade).
- 4405, 24, 25, 26, and 27 are Cy5-labeled polypeptides, of which 4405 is Cy5-labeled Angiopep-2, and the PDC molecules corresponding to 24, 25, 26, and 27 are 17, 18, 20, and 21, respectively.
- U87-MG or U373 cells were subcultured and expanded to the required cell number, the cells were digested and centrifuged to collect the cell pellet, the cells were resuspended in an appropriate amount of complete medium, the cell viability was detected and counted, and the cell concentration was adjusted to 4 ⁇ 104 cells/mL with complete medium.
- 100 ⁇ L/well was inoculated into the middle well of the 96-well plate, and the edge wells were filled with the same volume of 100 ⁇ L/well DPBS, and incubated in a 37°C, 5% CO2 incubator overnight.
- the peptide was dissolved in DMSO to 1 mM. During the experiment, the peptide was diluted with each cell growth medium to a concentration of 10 ⁇ M. The peptide was diluted 3-fold with each cell growth medium, for a total of 3 concentrations (10 ⁇ M-1.11 ⁇ M).
- the confocal imaging results are shown in Figures 13 to 20.
- the endocytosis effect of the polypeptides in U87-MG and U373 cells is 27>26>25>24>4405, and the corresponding endocytosis effect of PDC molecules is 21>20>18>17>ANG-1005.
- test samples Dissolve the peptide to be tested in DMSO or other organic solvents to 100 times the final concentration of 1mM, and place it at -20°C for use.
- Plasma thawing Take out human plasma (sample number * 2.1) mL from the -80°C refrigerator and quickly thaw it in a 37°C water bath.
- MIX mixture
- Oscillate on a vortex oscillator for 30s divide 100 ⁇ L into each according to the time gradient, and incubate, all on ice. Incubation: Incubate in a 37°C water bath at six time points: 0min, 15min, 30min, 60min, 90min, and 120min. Stop the reaction: After incubation, add 4 times the volume of precipitant. Mixing: Oscillate on a vortex oscillator for 30s. Centrifugation: 4°C, 15000r/min for 10min. Take the supernatant, transfer to a small injection tube, and send to LC-MS/MS for analysis.
- the dot-line graph with the original drug remaining rate (%) as the ordinate and time as the abscissa shows a trend of sample degradation in in vitro plasma over time, and the sample stability result is obtained.
- the elimination rate constant (Ke) was calculated based on the first-order kinetic formula, and the T 1/2 (min) of the compound in plasma was further calculated based on the formula.
- Mouse plasma (heparin sodium) was obtained by Slack.
- Samples were diluted to 0.1 mM using DMSO.
- Termination reaction After incubation, different pretreatment methods are performed according to the pretreatment methods required for biological analysis.
- Centrifugation Centrifuge at 4°C, 13,000 rpm for 10 min in a low-temperature high-speed centrifuge. Take 70 ⁇ L of the supernatant, transfer it to a sample injection bottle, and analyze it by LC-MS/MS.
- Result evaluation The peak area of the peptide at different time points was detected by LC-MS/MS method, and the results were expressed as the percentage of the original drug remaining rate. The results are shown in Table 3, Table 4, and Figure 22. Table 3 shows the fitting results of the prism software. The half-life of compound 21 and the half-life of compound 32 were 1021 min and 304.5 min, respectively, using the prism software.
- Test Example 5 In vitro evaluation of peptide molecules penetrating the blood-brain barrier
- 25, 26, and 27 are Cy5-labeled polypeptides, of which 4405 is Cy5-labeled Angiopep-2, and the PDC molecules corresponding to 25, 26, and 27 are 18, 20, and 21, respectively.
- the original culture medium was aspirated and discarded, and room temperature sterile HBSS was added for rinsing once, and replaced with EBM-2 culture medium containing 3 ⁇ g/mL puromycin, and the medium was changed every two days thereafter (no puromycin was added for subsequent changes).
- EBM-2 culture medium containing 3 ⁇ g/mL puromycin
- the medium was changed every two days thereafter (no puromycin was added for subsequent changes).
- the above cells were transferred to a Transwell covered with rat tail glue for culture, and continued to be cultured for 7-8 days, and the medium was changed every two days and the resistance value was tested.
- the rate at which drugs permeate through rat primary brain endothelial cells is expressed by the apparent permeability coefficient (Papp, unit: ⁇ 10-6cm/s).
- VR is the volume of the receiving solution (0.6 mL)
- Area is the membrane area of the Transwell-24 well plate chamber (0.33 cm 2 )
- Time is the incubation time (unit: s)
- CR is the drug concentration at the sample receiving end
- C0 is the drug concentration at the initial time 0 of the sample.
- the experimental results are shown in FIG23 .
- the experimental results show that in the in vitro blood-brain barrier model, the peptide penetration is 27>26>25>4405, and the corresponding PDC molecule penetration is 21>20>18>ANG-1005.
- mice 6-8 week old male ICR mice (purchased from Hunan Slake Jingda Experimental Animal Co., Ltd.), DMSO (dimethyl sulfoxide) (purchased from Aladdin).
- 24, 25, 26, and 27 are Cy5-labeled polypeptides, and the PDC molecules corresponding to 24, 25, 26, and 27 are 17, 18, 20, and 21, respectively.
- Preparation of test samples and sample processing label the peptide to be tested with cy5, prepare the marker working solution with DMSO, plot the fluorescence value and the marker curve corresponding to the concentration of the labeled peptide in plasma and brain homogenate, respectively, and prepare the injection dose according to the 1/2000 ratio of the marker curve detection line.
- Tail vein administration while the animal is awake, use a 1mL syringe with a 27# needle to administer 200uL into the tail vein of the mouse.
- Blood collection and centrifugation of sampled serum under isoflurane anesthesia, cut open the heart and ears at fixed time points, and collect blood with a pipette. The blood collection volume is not less than 0.4ml.
- the collected sampled blood is centrifuged at 4°C and 4000g for 5min. Take the supernatant. Take the brain and grind the brain tissue homogenate: perfuse the whole body of the mouse with 20mL PBS from the heart, then cut off the head and take the brain. Take half of the brain tissue, weigh it, and homogenize it at 1:2 (0.1g brain tissue plus 100uL PBS). The homogenization speed is 60hz, 60s, and two 2mm magnetic beads per tube. After homogenization, take the middle homogenate, and put the remaining brain tissue in a culture dish and store it in a -80°C refrigerator.
- Sample detection After the brain tissue is taken out and before homogenization, use the IVIS system imaging scan, take 100 ⁇ L of serum and brain homogenate, add it to a 96-well plate to read the fluorescence value, and the sample to be tested and the standard curve are detected on the enzyme reader at the same time (640/670Cy5).
- the concentrations in different matrices at different time points were obtained according to the standard curves.
- the drug-time curves were plotted using the drug concentrations in brain tissue and plasma as the ordinate and time as the abscissa.
- the areas under the curves (AUCs) of the brain tissue and plasma drug-time curves were calculated respectively, and the AUC blood-brain ratio was calculated based on the AUCs.
- AUC blood-brain ratio AUCBrain/AUCPlasma, where AUCBrain refers to the area under the curve of the brain tissue drug-time curve, and AUCplasma refers to the area under the curve of the plasma drug-time curve.
- the experimental results are shown in Table 5 and Figures 24 to 28.
- the PDC molecules of the present invention can penetrate the blood-brain barrier in mice and reach the brain tissue, and have a good penetration effect.
- the peptide was dissolved in acetonitrile/water solution, it was analyzed by Agilent HPLC 1260, and the buffer was A (90% H2O (20mM Na 2 HPO4 + 20mM NaH2PO4) / 10% ACN) and B (70% ACN + 30% H2O).
- the chromatographic column was Yuexu C18 reverse phase column (4.6*150mm, 5um, ), the chromatograph detection wavelength was set at 214 nm, the flow rate was 1 mL/min, and the gradient was 10% B-95% B in 26 min.
- mice ICR mice, 18, male, 6-7 weeks old, purchased from Hunan Slake Jingda Experimental Animal Co., Ltd.
- mice aged 6-7 weeks were raised under standard conditions. After one week of adaptive feeding, 8 mice of similar weight were randomly divided into 2 groups, 4 mice in each group. The compounds were prepared at 1.25 mg/mL, and the tail vein injection volume was 10 mL/kg. After the administration, about 200uL of blood was collected from the submandibular vein of the mice at 40s, 5min, 15min, 30min, 60min, 120min, 240min, and 360min. The blood samples were placed in EDTA anticoagulant tubes, centrifuged, separated, and collected plasma, which was placed in a -80°C refrigerator for testing.
- the PDC molecules of the present invention have good pharmacokinetic properties.
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Abstract
Description
本发明属于生物医药多肽技术领域,具体涉及一种氯毒素类似物的多肽偶联物及其在制备用于预防、处理、治疗癌症相关疾病的药物中的用途。The present invention belongs to the technical field of biopharmaceutical polypeptides, and specifically relates to a polypeptide conjugate of a chlorotoxin analog and its use in preparing a drug for preventing, treating and curing cancer-related diseases.
氯毒素(Chlorotoxin,CTX)是从雷蛇属以色列金蝎(Leiurus quinquestriatus)的毒液中提取的由36个氨基酸组成的肽段,它含有36个氨基酸残基,包括4个二硫键,其氨基酸序列为:Chlorotoxin (CTX) is a 36-amino acid peptide extracted from the venom of the Israeli golden scorpion (Leiurus quinquestriatus). It contains 36 amino acid residues, including 4 disulfide bonds, and its amino acid sequence is:
Met1-Cys2-Met3-Pro4-Cys5-Phe6-Thr7-Thr8-Asp9-His10-Gln11-Met12-Ala13-Arg14-Lys15-Cys16-Asp17-Asp18-Cys19-Cys20-Gly21-Gly22-Lys23-Gly24-Arg25-Gly26-Lys27-Cys28-Tyr29-Gly30-Pro31-Gln32-Cys33-Leu34-Cys35-Arg36-NH2(DisuLfidebridge:Cys2-Cys19,Cys5-Cys28,Cys16-Cys33,Cys20-Cys35)。Met 1 -Cys 2 -Met 3 -Pro 4 -Cys 5 -Phe 6 -Thr 7 -Thr 8 -Asp 9 -His 10 -Gln 11 -Met 12 -Ala 13 -Arg 14 -Lys 15 -Cys 16 -Asp 17 -Asp 18 -Cys 19 -Cys 20 -Gly 21 -Gly 22 -Lys 23 -Gly 24 -Arg 25 -Gly 26 -Lys 27 -Cys 28 -Tyr 29 -Gly 30 -Pro 31 -Gln 32 -Cys 33 -Leu 34 -Cys 35 -Arg 36 -NH 2 (DisuLfidebridge:Cys 2 -Cys 19 ,Cys 5 -Cys 28 ,Cys 16 -Cys 33 ,Cys 20 -Cys 35 ).
其分子结构式为:
Its molecular structure is:
前期许多研究表明氯毒素是氯离子通道(chloride channel)阻断剂,可以特异性地结合于肿瘤细胞,同时,氯毒素已被证实可以通过血脑屏障,再次,氯毒素具有良好的生物相容性,对正常组织细胞无明显毒性作用。此外,氯毒素在体内代谢慢,供研究者进行显像与治疗的时间充足。因此,氯毒素可用作靶向剂来将细胞毒性剂和/或成像剂递送到各种肿瘤,包括转移性瘤和脑瘤如恶性胶质瘤。Many previous studies have shown that chlorotoxin is a chloride channel blocker that can specifically bind to tumor cells. At the same time, chlorotoxin has been shown to pass through the blood-brain barrier. Again, chlorotoxin has good biocompatibility and has no obvious toxic effects on normal tissue cells. In addition, chlorotoxin is slowly metabolized in the body, providing researchers with ample time for imaging and treatment. Therefore, chlorotoxin can be used as a targeting agent to deliver cytotoxic agents and/or imaging agents to various tumors, including metastatic tumors and brain tumors such as malignant gliomas.
目前在应用中,主要将氯毒素开发作为载体,将放射性同位素、荧光分子等运载入肿瘤内部,实现肿瘤成像,从而使得手术过程中能够完整准确地切除肿瘤组织,最大程度保留正常脑组织。氯毒素作为载体还能将纳米颗粒和药物等运载入肿瘤内部,减少药物对机体其他器官的损害,减少副作用。氯毒素结合脑胶质瘤细胞的特性最早在125I标记的小肽(125I-CTX)和131I标记的小肽(131I-CTX)上得到研究,结果发现125I-CTX能够聚集在荷瘤小鼠的肿瘤中,同时125I-CTX能够特异性结合胶质瘤细胞,而不能与正常星形胶质细胞结合。而131I-CTX是目前研究最广泛的氯毒素复合物,其放射出的辐射被检测后可以鉴定和定位脑肿瘤。目前,131I与吲哚菁绿(ICG)标记的氯毒素已经通过美国临床前安全性试验,分别进入II/I期临床试验。在另一项研究中,发现氯毒素能够与神经外胚层起源的肿瘤(与中枢神经系统细胞有共同的胚胎起源的肿瘤)结合。还发现与生物素biotin连接的氯毒素可以与多于200种恶性胶质瘤和其他不同阶段肿瘤的活检样本相结合,包括黑素瘤、神经母细胞瘤、髓母细胞瘤和小细胞肺癌,但不能与大脑、皮肤、肾脏和肺的正常组织结合。同时,一些荧光染料,如Cy5.5,BLZ-100,800CW,与氯毒素连接后都能在体内特异性地靶向肿瘤,此外氯毒素能够将纳米探针、磁共振成像造影剂以及治疗性药物运送到肿瘤组织中。其它氯毒素结合物,包括融合蛋白,如连接于皂草素的氯毒素-GST融合蛋白也已表明可以显著和选择性地杀伤肿瘤细胞。为了开发用于神经胶质瘤诊疗的新工具,目前人们还构建了许多基于CTX的纳米颗粒。此外,氯毒素具有作为向癌细胞特异性递送抗癌药物的载体的潜力。氯毒素显示结合胶质瘤细胞,但不能结合正常大鼠星形胶质细胞和人类横纹肌肉瘤细胞系,其作为人体肿瘤选择性靶向新药和诊断(包括级别判断)的特异标记有着巨大的应用前景。At present, in application, chlorotoxin is mainly developed as a carrier to carry radioactive isotopes, fluorescent molecules, etc. into the tumor to achieve tumor imaging, so that the tumor tissue can be completely and accurately removed during surgery, and normal brain tissue can be retained to the greatest extent. Chlorotoxin as a carrier can also carry nanoparticles and drugs into the tumor, reducing the damage of drugs to other organs of the body and reducing side effects. The characteristics of chlorotoxin binding to brain glioma cells were first studied on 125I-labeled small peptides (125I-CTX) and 131I-labeled small peptides (131I-CTX). The results showed that 125I-CTX can accumulate in the tumors of tumor-bearing mice, and 125I-CTX can specifically bind to glioma cells, but not to normal astrocytes. 131I-CTX is the most widely studied chlorotoxin complex, and the radiation it emits can be detected to identify and locate brain tumors. At present, 131I and indocyanine green (ICG) labeled chlorotoxin have passed the US preclinical safety test and entered Phase II/I clinical trials respectively. In another study, chlorotoxin was found to bind to tumors of neuroectodermal origin (tumors that share an embryonic origin with cells of the central nervous system). It was also found that chlorotoxin linked to biotin could bind to more than 200 biopsy samples of malignant gliomas and other tumors at different stages, including melanoma, neuroblastoma, medulloblastoma, and small cell lung cancer, but could not bind to normal tissues of the brain, skin, kidney, and lung. At the same time, some fluorescent dyes, such as Cy5.5, BLZ-100, and 800CW, can specifically target tumors in vivo after being linked to chlorotoxin. In addition, chlorotoxin can deliver nanoprobes, magnetic resonance imaging contrast agents, and therapeutic drugs to tumor tissues. Other chlorotoxin conjugates, including fusion proteins, such as chlorotoxin-GST fusion proteins linked to saporin, have also been shown to significantly and selectively kill tumor cells. In order to develop new tools for the diagnosis and treatment of gliomas, many CTX-based nanoparticles have been constructed. In addition, chlorotoxin has the potential to be a carrier for the specific delivery of anticancer drugs to cancer cells. Chlorotoxin was shown to bind to glioma cells, but not to normal rat astrocytes and human rhabdomyosarcoma cell lines, and has great application prospects as a specific marker for selectively targeting new drugs and diagnosis (including grade determination) of human tumors.
脑瘤它的全名应该叫颅脑肿瘤,分为原发于颅脑的和继发于其他脏器恶性肿瘤。恶性神经胶质瘤是脑瘤的一种,也是最难治疗的癌症种类之一。常用的方法包括手术、放疗、化疗和靶向药,但如果复发,患者的平均生存时间不到12个月。恶性脑瘤治疗效果不好,有两个重要的原因:第一是手术很难把肿瘤切干净,会担心切多了伤害到大脑核心功能,第二是绝大多数抗癌药很难到达肿瘤部位,因为大脑有一个保护层叫“血脑屏障(BBB)”,比如紫杉醇(Paclitaxel,PTX)是常见的肿瘤化疗药物,但因血脑屏障(BBB)的存在,PTX不能进入脑内,对胶质瘤无明显疗效。The full name of brain tumor should be intracranial tumor, which is divided into primary tumors in the brain and secondary tumors in other organs. Malignant glioma is a type of brain tumor and one of the most difficult types of cancer to treat. Commonly used methods include surgery, radiotherapy, chemotherapy and targeted drugs, but if recurrence occurs, the average survival time of patients is less than 12 months. There are two important reasons why the treatment of malignant brain tumors is not effective: first, it is difficult to completely remove the tumor during surgery, and there is a worry that cutting too much will damage the core functions of the brain; second, it is difficult for most anticancer drugs to reach the tumor site because the brain has a protective layer called the "blood-brain barrier (BBB)". For example, paclitaxel (PTX) is a common tumor chemotherapy drug, but due to the existence of the blood-brain barrier (BBB), PTX cannot enter the brain and has no obvious effect on gliomas.
传统的治疗方式由于缺乏对肿瘤细胞的靶向选择性,在杀伤肿瘤细胞的同时也损伤正常的组织细胞。同时由于BBB的存在,因此寻找新型的靶向药物递送系统已经成为肿瘤治疗研究的重要方向。因而针对脑瘤的治疗存在着极大的尚未得到满足的临床需求,对新型脑瘤药物的研发也迫在眉睫。中国专利CN102844044A公开了一种具有不超过一个可用作结合位点的赖氨酸氯毒素多肽,在一些实施方式中,提供的赖氨酸减少的氯毒素多肽和/或其结合物可以用于医药(例如,在各种治疗和/或诊断背景中)。基于氯毒素的特性,本发明提供了一种全新的氯毒素类似物的多肽偶联物,有望开发一种具有良好发展前景的针对脑瘤的药物,通过人工改造能更多发挥其本身优势,进一步增加其稳定性和药效,降低毒性。Traditional treatment methods lack targeted selectivity for tumor cells, and while killing tumor cells, they also damage normal tissue cells. At the same time, due to the existence of BBB, finding a new targeted drug delivery system has become an important direction of tumor treatment research. Therefore, there is a huge unmet clinical demand for the treatment of brain tumors, and the development of new brain tumor drugs is also imminent. Chinese patent CN102844044A discloses a lysine chlorotoxin polypeptide with no more than one binding site. In some embodiments, the provided lysine-reduced chlorotoxin polypeptide and/or its conjugate can be used in medicine (for example, in various treatment and/or diagnostic contexts). Based on the characteristics of chlorotoxin, the present invention provides a new polypeptide conjugate of chlorotoxin analogs, which is expected to develop a drug for brain tumors with good development prospects. Through artificial modification, it can give full play to its own advantages, further increase its stability and efficacy, and reduce toxicity.
发明内容Summary of the invention
以下仅概况说明本发明的一些方面,并不局限于此。这些方面和其他部分在后面有更完整的说明。本说明书中的所有参考文献通过整体引用与此。当本说明书的公开内容与引用文献有差异时,以本说明书的公开内容为准。The following is only an overview of some aspects of the present invention, which is not limited thereto. These aspects and other parts are described in more detail below. All references in this specification are incorporated herein by reference in their entirety. When there is a discrepancy between the disclosure of this specification and the referenced documents, the disclosure of this specification shall prevail.
本发明的目的是要针对恶性肿瘤脑瘤治疗存在的尚未得到满足的临床需求的问题,提供一种新型的氯毒素类似物的多肽偶联物。The purpose of the present invention is to provide a novel polypeptide conjugate of chlorotoxin analogues to address the unmet clinical needs in the treatment of malignant brain tumors.
第一方面,本发明提供一种氯毒素类似物的多肽偶联物,其包含如下式(I)所示的结构:
Peptide-(Linker-Drug)m
(I)In a first aspect, the present invention provides a polypeptide conjugate of a chlorotoxin analog, comprising a structure as shown in the following formula (I):
Peptide-(Linker-Drug) m
(I)
其中:Peptide是多肽;Linker为连接子;Drug为抗癌剂;m为1、2或3;Wherein: Peptide is a polypeptide; Linker is a linker; Drug is an anticancer agent; m is 1, 2 or 3;
所述多肽的氨基酸序列选自SEQ ID NO:1~SEQ ID NO:8所示的氨基酸序列中的一种,所述氨基酸序列可被修饰或不被修饰。The amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
SEQ ID NO:1:MCMPCFTTDHQMARKCDDCCGGKGRGKCYGPQCLCR;SEQ ID NO: 1: MCMPCFTTDHQMARKCDDCCGGKGRGKCYGPQCLCR;
SEQ ID NO:2:MCMPCFTTDHQMARRCDDCCGGRGRGRCYGPQCLCR;SEQ ID NO: 2: MCMPCFTTDHQMARRCDDCCGGRGRGRCYGPQCLCR;
SEQ ID NO:3:MCMPCFTTDHQMARKCDDCCGGRGRGRCYGPQCLCR;SEQ ID NO: 3: MCMPCFTTDHQMARKCDDCCGGRGRGRCYGPQCLCR;
SEQ ID NO:4:MCMPCFTTDHQMARRCDDCCGGKGRG RCYGPQCLCR;SEQ ID NO: 4: MCMPCFTTDHQMARRCDDCCGGKGRG RCYGPQCLCR;
SEQ ID NO:5:MCMPCFTTDHQMARRCDDCCGGRGRGKCYGPQCLCR;SEQ ID NO: 5: MCMPCFTTDHQMARRCDDCCGGRGRGKCYGPQCLCR;
SEQ ID NO:6:MCMPCFTTDHQMARRCDDCCGGKGRGKCYGPQCLCR;SEQ ID NO: 6: MCMPCFTTDHQMARRCDDCCGGKGRGKCYGPQCLCR;
SEQ ID NO:7:MCMPCFTTDHQMARACDDCCGGKGRGKCYGPQCLCR;SEQ ID NO: 7: MCMPCFTTDHQMARACDDCCGGKGRGKCYGPQCLCR;
SEQ ID NO:8:NleCNlePCFTTDHQNleARRCDDCCGGRGRGKCYGPQCLCR。SEQ ID NO: 8: NleCNlePCFTTDHQNleARRCDDCCGGRGRGKCYGPQCLCR.
优选地,所述多肽的氨基酸序列选自SEQ ID NO:1、SEQ ID NO:5、SEQ ID NO:6、SEQ ID NO:7所示的氨基酸序列中的一种,所述氨基酸序列可被修饰或不被修饰。Preferably, the amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1, SEQ ID NO: 5, SEQ ID NO: 6, and SEQ ID NO: 7, and the amino acid sequence may be modified or unmodified.
在一些实施方式中,所述多肽的氨基酸序列可被修饰,所述修饰选自N-末端乙酰化和/或C-末端酰胺化。In some embodiments, the amino acid sequence of the polypeptide may be modified, and the modification is selected from N-terminal acetylation and/or C-terminal amidation.
在一些实施方式中,所述多肽的氨基酸序列与SEQ ID NO:1~SEQ ID NO:8具有至少85%的总体序列的同一性。In some embodiments, the amino acid sequence of the polypeptide has at least 85% overall sequence identity with SEQ ID NO: 1 to SEQ ID NO: 8.
在一些实施方式中,所述多肽的氨基酸序列与SEQ ID NO:1~SEQ ID NO:8具有至少90%体序列的同一性。In some embodiments, the amino acid sequence of the polypeptide has at least 90% sequence identity with SEQ ID NO: 1 to SEQ ID NO: 8.
在一些实施方式中,所述多肽的氨基酸序列与SEQ ID NO:1~SEQ ID NO:8具有至少95%体序列的同一性。In some embodiments, the amino acid sequence of the polypeptide has at least 95% sequence identity with SEQ ID NO: 1 to SEQ ID NO: 8.
在一些实施方式中,所述多肽的氨基酸序列具有至少一个可用于连接子链接的位点,所述可用于连接子链接的位点为氨基酸序列中的-NH2和/ 或-COOH。In some embodiments, the amino acid sequence of the polypeptide has at least one site that can be used for linking the sub-linker, and the site that can be used for linking the sub-linker is -NH2 and/or or -COOH.
在一些实施方式中,所述多肽的氨基酸序列具有至少一个可用于连接子链接的位点,所述可用于连接子链接的-NH2位点为赖氨酸侧链的-NH2。In some embodiments, the amino acid sequence of the polypeptide has at least one site that can be used for linking a linker, and the -NH2 site that can be used for linking a linker is the -NH2 of a lysine side chain.
在一些实施方式中,所述多肽的氨基酸序列具有至少一个可用于连接子链接的位点,所述可用于连接子链接的-NH2位点为肽链N端甲硫氨酸的-NH2;In some embodiments, the amino acid sequence of the polypeptide has at least one site that can be used for linking with a linker, and the -NH2 site that can be used for linking with a linker is the -NH2 of the methionine at the N-terminus of the peptide chain;
进一步地,所述可用于连接子链接的-NH2位点对应于所述多肽的氨基酸序列的第1位、第15位、第23位和/或第27位。Furthermore, the -NH2 site available for linker linkage corresponds to the 1st, 15th, 23rd and/or 27th position of the amino acid sequence of the polypeptide.
在一些实施方式中,所述多肽的氨基酸序列具有至少一个可用于连接子链接的位点,所述可用于连接子链接的-COOH位点为天冬氨酸或谷氨酸侧链的-COOH。In some embodiments, the amino acid sequence of the polypeptide has at least one site that can be used for linking with a linker, and the -COOH site that can be used for linking with a linker is the -COOH of the side chain of aspartic acid or glutamic acid.
在一些实施方式中,所述连接子独立地选自以下的结构或以下结构任意的组合:In some embodiments, the linker is independently selected from the following structures or any combination of the following structures:
-GALGLPG-,其中,p为1、2、3、4或5。 -GALGLPG-, where p is 1, 2, 3, 4 or 5.
进一步地,所述连接子独立地选自以下的结构或以下结构任意的组合 -GALGLPG-。Furthermore, the linker is independently selected from the following structures or any combination of the following structures -GALGLPG-.
进一步地,所述连接子独立地选自以下的结构或以下结构任意的组合 -GALGLPG-。Furthermore, the linker is independently selected from the following structures or any combination of the following structures -GALGLPG-.
优选地,本发明提供一种多肽偶联物,其特征在于,具有如下式(II)所示的结构:
Preferably, the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (II):
其中:Peptide是多肽,Drug为抗癌剂;Wherein: Peptide is a polypeptide, Drug is an anticancer agent;
m为1、2或3;m is 1, 2 or 3;
所述多肽的氨基酸序列选自SEQ ID NO:1~SEQ ID NO:8所示的氨基酸序列中的一种,所述氨基酸序列可被修饰或不被修饰。The amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
优选地,本发明提供一种多肽偶联物,其特征在于,具有如下式(III)所示的结构:
Preferably, the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (III):
其中:Peptide是多肽,Drug为抗癌剂;Wherein: Peptide is a polypeptide, Drug is an anticancer agent;
m为1、2或3;m is 1, 2 or 3;
所述多肽的氨基酸序列选自SEQ ID NO:1~SEQ ID NO:8所示的氨基酸序列中的一种,所述氨基酸序列可被修饰或不被修饰。The amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
优选地,本发明提供一种多肽偶联物,其特征在于,具有如下式(IV)所示的结构:
Preferably, the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (IV):
其中:Peptide是多肽,Drug为抗癌剂;Wherein: Peptide is a polypeptide, Drug is an anticancer agent;
m为1、2或3;m is 1, 2 or 3;
所述多肽的氨基酸序列选自SEQ ID NO:1~SEQ ID NO:8所示的氨基酸序列中的一种,所述氨基酸序列可被修饰或不被修饰。The amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
优选地,本发明提供一种多肽偶联物,其特征在于,具有如下式(V)所示的结构:
Preferably, the present invention provides a polypeptide conjugate, characterized in that it has a structure as shown in the following formula (V):
其中:Peptide是多肽,Drug为抗癌剂;Wherein: Peptide is a polypeptide, Drug is an anticancer agent;
m为1、2或3;m is 1, 2 or 3;
所述多肽的氨基酸序列选自SEQ ID NO:1~SEQ ID NO:8所示的氨基酸序列中的一种,所述氨基酸序列可被修饰或不被修饰。The amino acid sequence of the polypeptide is selected from one of the amino acid sequences shown in SEQ ID NO: 1 to SEQ ID NO: 8, and the amino acid sequence may be modified or unmodified.
在一些实施方式中,所述抗癌剂选自BCNU、顺铂、吉西他滨、羟基脲、紫杉醇、替莫唑胺、托泊替康、氟尿嘧啶、长春新碱、长春花碱、甲基苄肼、达卡巴嗪、六甲蜜胺、氨甲蝶呤、巯基嘌呤、硫鸟嘌呤、磷酸氟达拉滨、克拉屈滨、喷司他汀、阿糖胞苷、阿扎胞苷、依托泊苷、替尼泊苷、伊立替康、多西他赛、多柔比星、柔红霉素、放线菌素D、伊达比星、普卡霉素、丝裂霉素、博莱霉素、他莫昔芬、氟他胺、亮丙瑞林、戈舍瑞林、氨鲁米特、阿那曲唑、安吖啶、天冬酰胺酶、米托蒽醌、米托坦、氨磷汀、奥法木单抗、贝伐单抗、托西莫单抗、阿仑单抗、西妥昔单抗、曲妥珠单抗、吉妥珠单抗奥唑米星、利妥昔单抗、帕尼单抗、替伊莫单抗、美登素(Maytansine)、喜树碱和/或它们的类似物(例如,DM1)或它们的组合。In some embodiments, the anticancer agent is selected from BCNU, cisplatin, gemcitabine, hydroxyurea, paclitaxel, temozolomide, topotecan, fluorouracil, vincristine, vinblastine, procarbazine, dacarbazine, hexamethylmelamine, methotrexate, mercaptopurine, thioguanine, fludarabine phosphate, cladribine, pentostatin, cytarabine, azacitidine, etoposide, teniposide, irinotecan, docetaxel, doxorubicin, daunorubicin, actinomycin D, idarubicin, plicamycin, Mitomycin, bleomycin, tamoxifen, flutamide, leuprolide, goserelin, aminoglutethimide, anastrozole, amsacrine, asparaginase, mitoxantrone, mitotane, amifostine, ofatumumab, bevacizumab, tositumomab, alemtuzumab, cetuximab, trastuzumab, gemtuzumab ozogamicin, rituximab, panitumumab, ibritumomab tiuxetansine, maytansine, camptothecin and/or their analogs (e.g., DM1) or a combination thereof.
在一些实施方式中,本发明所述的多肽偶联物中的抗癌剂是水溶性差的化合物。正如本领域技术人员将认识到的,多种水溶性差的抗癌剂适用于本发明。例如,抗癌剂可以进一步的选自紫杉烷类,紫杉烷类被认为是治疗许多其他抗肿瘤剂难治的实体瘤的有效药物。更进一步的所述抗癌剂优选的为紫杉醇、多西他赛或它们的组合。In some embodiments, the anticancer agent in the polypeptide conjugate of the present invention is a poorly water-soluble compound. As will be appreciated by those skilled in the art, a variety of poorly water-soluble anticancer agents are suitable for use in the present invention. For example, the anticancer agent may be further selected from the taxanes, which are considered to be effective drugs for treating solid tumors that are refractory to many other anti-tumor agents. Further, the anticancer agent is preferably paclitaxel, docetaxel, or a combination thereof.
在一些实施方式中,本发明所述的多肽偶联物中的抗癌剂是美登素(Maytansine)和/或它们的类似物(例如,DM1)。In some embodiments, the anticancer agent in the polypeptide conjugates of the present invention is maytansine and/or its analogs (eg, DM1).
在一些实施方式中,本发明提供的多肽偶联物进一步被亲脂性取代基取代,其中,亲脂性取代基可独立地选自以下基团: q为0~20中任意一个整数;n为12、13、14、15、16、17、18、19或20。进一步地,n为12、14或16。In some embodiments, the polypeptide conjugate provided by the present invention is further substituted with a lipophilic substituent, wherein the lipophilic substituent can be independently selected from the following groups: q is any integer from 0 to 20; n is 12, 13, 14, 15, 16, 17, 18, 19 or 20. Further, n is 12, 14 or 16.
亲脂性取代基直接连接多肽偶联物或可经由连接子连接至多肽偶联物,独立地选自以下基团: 其中,连接子可为上述连接子之一或其任意的组合。The lipophilic substituent is directly linked to the polypeptide conjugate or can be linked to the polypeptide conjugate via a linker, and is independently selected from the following groups: The linker may be one of the above linkers or any combination thereof.
优选地,本发明提供的多肽偶联物进一步被取代,取代基可独立地选自以下基团:
Preferably, the polypeptide conjugate provided by the present invention is further substituted, and the substituents can be independently selected from the following groups:
本发明提供一种多肽偶联物,所述多肽偶联物结构选自如下结构的一种:
The present invention provides a polypeptide conjugate, wherein the structure of the polypeptide conjugate is selected from one of the following structures:
另一方面,本发明还涉及一种药物组合物,其包含本发明任一所述的多肽偶联物。On the other hand, the present invention also relates to a pharmaceutical composition comprising any one of the polypeptide conjugates of the present invention.
在一些实施方案中,本发明所述的药物组合物进一步包含药学上可接受的载体和/或赋形剂、稀释剂、辅剂和媒介物的至少一种。In some embodiments, the pharmaceutical composition described in the present invention further comprises at least one of a pharmaceutically acceptable carrier and/or excipient, a diluent, an adjuvant and a vehicle.
另一方面,本发明涉及所述的多肽偶联物或药物组合物在制备用于预防、处理、治疗或减轻癌症的药物中的用途,其中,所述的药物用于预防、处理、治疗或减轻癌症疾病。On the other hand, the present invention relates to the use of the polypeptide conjugate or pharmaceutical composition in the preparation of a drug for preventing, treating, curing or alleviating cancer, wherein the drug is used for preventing, treating, curing or alleviating cancer.
在一些实施方式中,所述癌症包括但不限于乳腺癌、肺癌、前列腺癌、肾癌、白血病、卵巢癌、胃癌、子宫癌、子宫内膜癌、肝癌、结肠癌、甲状腺癌、胰腺癌、结直肠癌、食道癌、脑瘤、皮肤癌、淋巴瘤、或多发性骨髓瘤;优选的,所述癌症为脑瘤;进一步的,所述癌症为脑胶质瘤。In some embodiments, the cancer includes but is not limited to breast cancer, lung cancer, prostate cancer, kidney cancer, leukemia, ovarian cancer, gastric cancer, uterine cancer, endometrial cancer, liver cancer, colon cancer, thyroid cancer, pancreatic cancer, colorectal cancer, esophageal cancer, brain tumor, skin cancer, lymphoma, or multiple myeloma; preferably, the cancer is a brain tumor; further, the cancer is a glioma.
本发明的优势在于:The advantages of the present invention are:
(1)本发明所提供的氯毒素类似物的多肽药物偶联物,利用亲水性的多肽修饰疏水抗肿瘤药物,提高了药物的溶解性。(1) The polypeptide-drug conjugate of chlorotoxin analog provided by the present invention utilizes a hydrophilic polypeptide to modify a hydrophobic anti-tumor drug, thereby improving the solubility of the drug.
(2)本发明提供的多肽偶联药物具有活性高,与靶点特异性结合强,细胞内吞作用明显的特点,对患者施用本发明的偶联物可以增加对靶细胞(特别是肿瘤细胞)的特异性,增加细胞的细胞内化,减少细胞的细胞降解,增加靶位点的积累,减少正常组织的蓄积,降低其生物毒性,克服耐药性,增加药物的生物活性和/或预防、限制或消除与单独施用治疗剂(即不作为本发明偶联物的一部分)相比的不良副作用、毒性和无作用的问题。(2) The polypeptide conjugate drug provided by the present invention has the characteristics of high activity, strong specific binding to the target, and obvious cellular endocytosis. Administration of the conjugate of the present invention to patients can increase the specificity for target cells (especially tumor cells), increase cellular internalization of cells, reduce cellular degradation of cells, increase accumulation at target sites, reduce accumulation in normal tissues, reduce its biological toxicity, overcome drug resistance, increase the biological activity of the drug and/or prevent, limit or eliminate adverse side effects, toxicity and ineffectiveness compared with the administration of the therapeutic agent alone (i.e., not as part of the conjugate of the present invention).
(3)氯毒素具有较好的穿透血脑屏障功能,将抗肿瘤药物与其偶联以后,可大大增加药物穿透血脑屏障的能力,对于脑肿瘤适应症有更好的效果。(3) Chlorotoxin has a good ability to penetrate the blood-brain barrier. After coupling anti-tumor drugs with it, the ability of drugs to penetrate the blood-brain barrier can be greatly increased, and it has a better effect on brain tumor indications.
术语the term
术语“肽”或“多肽”的含义是被本专业领域的技术人员所熟知的。通常情况下,肽或多肽是两个或多个氨基酸由酰胺键链接,酰胺键则由一个氨基酸的氨基与相邻氨基酸的羧基构成。本文所述的多肽可包含天然存在的氨基酸或者非天然存在的氨基酸。可被修饰成其类似物,衍生物,功能模拟物,伪肽等诸如此类包含至少两个氨基酸的化合物。除非指明N-端或C-末端具有特定的修饰,否则一个包含特定氨基酸序列的多肽,则包括不加修饰的和修饰的氨基和/或羧基末端,这是被本领域的专业技术人员所熟知的。一个特定的氨基酸序列的多肽可以包括修饰的氨基酸和/或额外的氨基酸,除非N-和/或C-末端包含妨碍进一步添加氨基酸的修饰。这样的修改包括,例如,N-末端的乙酰化和/或C-末端的酰胺化。The meaning of the term "peptide" or "polypeptide" is well known to those skilled in the art. Generally, a peptide or polypeptide is two or more amino acids linked by an amide bond, which is formed by the amino group of one amino acid and the carboxyl group of the adjacent amino acid. The polypeptides described herein may contain naturally occurring amino acids or non-naturally occurring amino acids. They may be modified into analogs, derivatives, functional mimetics, pseudopeptides, and the like containing at least two amino acids. Unless it is specified that the N-terminus or C-terminus has a specific modification, a polypeptide comprising a specific amino acid sequence includes unmodified and modified amino and/or carboxyl termini, which is well known to those skilled in the art. A polypeptide of a specific amino acid sequence may include modified amino acids and/or additional amino acids, unless the N- and/or C-terminus contain modifications that prevent further addition of amino acids. Such modifications include, for example, acetylation of the N-terminus and/or amidation of the C-terminus.
本发明的多肽可以通过改造修饰,形成多肽衍生物。正如本领域技术人员所熟知的,可以对多肽进行各种改造修饰。典型的改造修饰包含但不限于,N-末端乙酰化、C-末端酰胺化、d型氨基酸替换、非天然氨基酸替换、脂肪酸修饰或以上各种修饰改造的组合。本发明包括任何被众所周知的多肽的修饰改造。例如,多肽衍生物可以包括对于多肽的化学修饰,如烷基化、酰基化、氨基甲酰化、碘化或其他任何产生多肽衍生物的改造修饰。多肽的改造修饰可以包含改造过的氨基酸,例如,羟基脯氨酸或羧基谷氨酸,并且可以包括以非肽键相连的氨基酸。The polypeptides of the present invention can be modified to form polypeptide derivatives. As is well known to those skilled in the art, various modifications can be made to the polypeptides. Typical modifications include, but are not limited to, N-terminal acetylation, C-terminal amidation, d-amino acid substitution, non-natural amino acid substitution, fatty acid modification, or a combination of the above modifications. The present invention includes any well-known modification of the polypeptide. For example, the polypeptide derivatives may include chemical modifications to the polypeptide, such as alkylation, acylation, carbamylation, iodination, or any other modification that produces a polypeptide derivative. The modification of the polypeptide may include modified amino acids, for example, hydroxyproline or carboxyglutamic acid, and may include amino acids connected by non-peptide bonds.
对于本发明的多肽的其它修饰改造可采用非天然氨基酸对多肽中的天然氨基酸进行取代,非天然氨基酸包含但不限于,2-氨基脂肪酸(Aad)、3-氨基脂肪酸(βAad)、β-丙氨酸,β-氨基丙酸(βAla)、2-氨基丁酸(Abu)、4-氨基丁酸、哌啶羧酸(4Abu)、6-氨基己酸(Acp)、2-氨基庚酸(Ahe)、2-氨基异丁酸(Aib)、3-氨基异丁酸(βAib)、2-氨基庚二酸(Apm)、2,4-二氨基丁酸(Dbu)、锁链素(Des),2,2'-二氨基庚二酸(Dpm),2,3-二氨基丙酸(Dpr),N-乙基甘氨酸(EtGly)、N-乙基天冬酰胺(EtAsn),羟赖氨酸(Hyl)、异羟赖氨酸(aHyl)、3-羟脯氨酸(3Hyp)、4-羟基脯氨酸(4Hyp)、异锁链素(Ide)、异-异亮氨酸(aIle)、N-甲基甘氨酸(MeGly)、N-甲基异亮氨酸(MeIle)、6-N-甲基赖氨酸(MeLys)、N-甲基缬氨酸(MeVal)、正缬氨酸(Nva)、正亮氨酸(Nle)和鸟氨酸(Orn)。当然,所有被修饰改造的α-氨基酸可以被相应的β-,γ-或ω-氨基羧酸所取代。For other modifications of the polypeptide of the present invention, non-natural amino acids can be used to replace the natural amino acids in the polypeptide, including but not limited to 2-amino fatty acid (Aad), 3-amino fatty acid (βAad), β-alanine, β-aminopropionic acid (βAla), 2-aminobutyric acid (Abu), 4-aminobutyric acid, piperidine carboxylic acid (4Abu), 6-aminohexanoic acid (Acp), 2-aminoheptanoic acid (Ahe), 2-aminoisobutyric acid (Aib), 3-aminoisobutyric acid (βAib), 2-aminopimelic acid (Apm), 2,4-diaminobutyric acid (Dbu), desmosine (Des), 2,2'- Diaminopimelate (Dpm), 2,3-diaminopropionic acid (Dpr), N-ethylglycine (EtGly), N-ethylasparagine (EtAsn), hydroxylysine (Hyl), isohydroxylysine (aHyl), 3-hydroxyproline (3Hyp), 4-hydroxyproline (4Hyp), isodesmosine (Ide), isoleucine (aIle), N-methylglycine (MeGly), N-methylisoleucine (MeIle), 6-N-methyllysine (MeLys), N-methylvaline (MeVal), norvaline (Nva), norleucine (Nle) and ornithine (Orn). Of course, all modified α-amino acids can be replaced by the corresponding β-, γ- or ω-aminocarboxylic acids.
术语“氨基酸”是指含有氨基和羧基的分子。合适的氨基酸包括但不限于天然存在的氨基酸的D-和L-异构体,以及通过有机合成或其它代谢途径制备的非天然存在的氨基酸。如本文所用,术语氨基酸包括但不限于α-氨基酸、天然氨基酸、非天然氨基酸和氨基酸类似物。The term "amino acid" refers to a molecule containing an amino group and a carboxyl group. Suitable amino acids include, but are not limited to, the D- and L-isomers of naturally occurring amino acids, and non-naturally occurring amino acids prepared by organic synthesis or other metabolic pathways. As used herein, the term amino acid includes, but is not limited to, α -amino acids, natural amino acids, non-natural amino acids, and amino acid analogs.
术语“天然存在的氨基酸”是指在自然界中合成的肽中常见的20种L-氨基酸中的任何一种,即丙氨酸(Ala或A)、精氨酸(Arg或R)、天冬酰胺(Asn或N)、天冬氨酸(Asp或D)、半胱氨酸(Cys或C)、谷氨酸(Glu或E)、谷氨酰胺(Glu或Q)、甘氨酸(Gly或G)、组氨酸(His或H)、异亮氨酸(Ile或I)、亮氨酸(Leu或L)、赖氨酸(Lys或K)、甲硫氨酸(Met或M)、苯丙氨酸(Phe或F)、脯氨酸(Pro或P)、丝氨酸(Ser或S)、苏氨酸(Thr或T)、色氨酸(Trp或W)、酪氨酸(Tyr或Y)和缬氨酸(Val或V)的L-异构体。The term "naturally occurring amino acid" refers to any of the 20 L-amino acids commonly found in peptides synthesized in nature, i.e., the L-isomers of alanine (Ala or A), arginine (Arg or R), asparagine (Asn or N), aspartic acid (Asp or D), cysteine (Cys or C), glutamic acid (Glu or E), glutamine (Glu or Q), glycine (Gly or G), histidine (His or H), isoleucine (Ile or I), leucine (Leu or L), lysine (Lys or K), methionine (Met or M), phenylalanine (Phe or F), proline (Pro or P), serine (Ser or S), threonine (Thr or T), tryptophan (Trp or W), tyrosine (Tyr or Y), and valine (Val or V).
“保守氨基酸取代”是其中氨基酸残基被具有相似侧链的氨基酸残基所取代的氨基酸取代。本领域已经定义了具有相似侧链的氨基酸残基家族。这些家族包括具有碱性侧链(例如,K、R、H)、酸性侧链(例如,D、E)、不带电荷的极性侧链(例如,G、N、Q、S、T、Y、C)、非极性侧链(例如,A、V、L、I、P、F、M、W)、β-分支侧链(例如,T、V、I)和芳族侧链(例如,Y、F、W、H)的氨基酸。因此,例如,多肽中预测非必需氨基酸残基优选被来自相同侧链家族的另一个氨基酸残基取代。可接受的取代的其它实例是基于电子等排考虑的取代(例如,正亮氨酸取代甲硫氨酸)或其它性质(例如,2-噻吩基丙氨酸取代苯丙氨酸)。"Conservative amino acid substitutions" are amino acid substitutions in which an amino acid residue is replaced by an amino acid residue with a similar side chain. Families of amino acid residues with similar side chains have been defined in the art. These families include amino acids with basic side chains (e.g., K, R, H), acidic side chains (e.g., D, E), uncharged polar side chains (e.g., G, N, Q, S, T, Y, C), non-polar side chains (e.g., A, V, L, I, P, F, M, W), β-branched side chains (e.g., T, V, I), and aromatic side chains (e.g., Y, F, W, H). Thus, for example, a predicted non-essential amino acid residue in a polypeptide is preferably replaced by another amino acid residue from the same side chain family. Other examples of acceptable substitutions are substitutions based on isosteric considerations (e.g., norleucine replacing methionine) or other properties (e.g., 2-thienylalanine replacing phenylalanine).
本发明的多肽可以使用本领域技术人员所熟知的方法制备,包括众所周知的化学合成的方法。因此,当多肽或其衍生物包含一个或多个非标准氨基酸,则极有可能是通过化学合成法制备而来。除了使用化学合成的方法制备多肽或其衍生物,还可以通过编码核酸表达来制备。这对于制备只含有天然氨基酸的多肽或其衍生物特别适用,在这种情况下可以使用众所周知的核酸编码多肽序列的制备方法(参见Sambrook et al.,Molecula r Cloning:A La bora tory Manua l,Third Ed.,Cold Spring Ha rbor Laboratory,NewYork(2001);Ausubel et al.,Current Protocols in Molecular Biology,John Wiley and Sons,Baltimore,MD(1999))。多肽可以在生物体中表达,并通过公知的纯化技术进行纯化。The polypeptides of the present invention can be prepared using methods well known to those skilled in the art, including well-known chemical synthesis methods. Therefore, when a polypeptide or its derivatives contain one or more non-standard amino acids, it is very likely to be prepared by chemical synthesis. In addition to using chemical synthesis methods to prepare polypeptides or their derivatives, they can also be prepared by expressing encoding nucleic acids. This is particularly applicable to the preparation of polypeptides or their derivatives containing only natural amino acids. In this case, well-known methods for preparing nucleic acid encoding polypeptide sequences can be used (see Sambrook et al., Molecula r Cloning: A Labora tory Manual, Third Ed., Cold Spring Harbor Laboratory, New York (2001); Ausubel et al., Current Protocols in Molecular Biology, John Wiley and Sons, Baltimore, MD (1999)). The polypeptide can be expressed in an organism and purified by well-known purification techniques.
术语“类似物”是指与参考物质共有一个或多个特定结构特征、要素、组分或部分的物质。通常,“类似物”显示出与参考物质的显著的结构相似性,例如共有核心或共有结构,而且在某些离散方式上也有所不同。在一些实施方案中,类似物是可以例如通过参考物质的化学操纵而从参考物质产生的物质。在一些实施方案中,类似物是可以通过与产生参考物质的合成过程基本上类似(例如,与它们共有多个步骤)的合成过程的进行来产生的物质。在一些实施方案中,类似物通过或可以通过与用于产生参考物质的合成过程不同的合成过程的进行来产生。The term "analog" refers to a substance that shares one or more specific structural features, elements, components or parts with a reference substance. Typically, an "analog" shows significant structural similarity to a reference substance, such as a shared core or shared structure, and also differs in certain discrete ways. In some embodiments, an analog is a substance that can be produced from a reference substance, for example, by chemical manipulation of the reference substance. In some embodiments, an analog is a substance that can be produced by the conduction of a synthetic process that is substantially similar to (e.g., shares multiple steps with) the synthetic process that produces the reference substance. In some embodiments, an analog is or can be produced by the conduction of a synthetic process that is different from the synthetic process used to produce the reference substance.
术语“氯毒素类似物”是指氨基酸序列显示出与适当的参考氯毒素的氨基酸序列(例如,SEQ ID NO:1或其相关片段的氨基酸序列)具有至少45%同一性的多肽。在一些实施方案中,氯毒素多肽具有显示出与SEQ ID NO:1或其相关片段具有至少50%、55%、60%、65%、70%、75%、80%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%、99%或100%同一性的氨基酸序列。在一些实施方案 中,氯毒素类似物具有与SEQ ID NO:1相同的氨基酸序列。在一些实施方案中,氯毒素类似物是氯毒素变体,因为它具有与SEQ ID NO:1或其相关片段的氨基酸序列不同的氨基酸序列。在一些实施方案中,氯毒素变体具有相对于SEQ ID NO:1或其相关片段在不超过1个、2个、3个、4个、5个、6个、7个、8个、9个或10个位置处不同的氨基酸序列。在一些实施方案中,SEQ ID NO:1的相关片段包含SEQ ID NO:1的至少5个邻接残基。在一些实施方案中,SEQ ID NO:1的相关片段包含5个至25个氨基酸的范围,所述氨基酸的范围与对应的SEQ ID NO:1的范围具有至少45%的序列同一性。适合在本发明的实践中使用的氯毒素类似物的实例描述于国际申请WO2003/101474中(其全部内容结合于此以供参考)。具体的实例包括包含或由SEQ ID NO.1或SEQ ID NO.8组成的多肽,以及其变异体等。The term "chlorotoxin analog" refers to a polypeptide having an amino acid sequence that exhibits at least 45% identity to the amino acid sequence of an appropriate reference chlorotoxin (e.g., the amino acid sequence of SEQ ID NO: 1 or a related fragment thereof). In some embodiments, the chlorotoxin polypeptide has an amino acid sequence that exhibits at least 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100% identity to SEQ ID NO: 1 or a related fragment thereof. In some embodiments, In some embodiments, the chlorotoxin analog has the same amino acid sequence as SEQ ID NO: 1. In some embodiments, the chlorotoxin analog is a chlorotoxin variant because it has an amino acid sequence different from the amino acid sequence of SEQ ID NO: 1 or its related fragments. In some embodiments, the chlorotoxin variant has an amino acid sequence that is different from SEQ ID NO: 1 or its related fragments at no more than 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 positions. In some embodiments, the related fragments of SEQ ID NO: 1 contain at least 5 adjacent residues of SEQ ID NO: 1. In some embodiments, the related fragments of SEQ ID NO: 1 contain a range of 5 to 25 amino acids, and the range of amino acids has at least 45% sequence identity with the corresponding range of SEQ ID NO: 1. Examples of chlorotoxin analogs suitable for use in the practice of the present invention are described in International Application WO2003/101474 (the entire contents of which are incorporated herein by reference). Specific examples include polypeptides comprising or consisting of SEQ ID NO. 1 or SEQ ID NO. 8, as well as variants thereof, etc.
关于序列同一性。根据本领域已知的方法,序列同一性是通过序列比对计算的。为了确定两个氨基酸序列的同一性百分比,比对序列以进行最佳比较。例如,可以在第一氨基酸序列的序列中引入空位以便与第二氨基酸序列最佳比对。然后比较相应氨基酸位置的氨基酸残基。当第一序列中的位置被第二序列中相应位置的相同氨基酸残基占据时,分子在该位置是相同的。两个序列之间的百分比同一性是序列共有的相同位置数的函数。因此%同一性=相同位置数/重叠位置的总数乘以100。在该比较中,序列可以是相同的长度或可以是不同的长度。用于确定比较窗口的最佳序列比对可以通过Smith和Waterman的局部同源性算法(J.Theor.Biol.,1981),通过Needleman和Wunsch的同源性比对算法(J.Mol.Biol,1972),通过Pearson和Lipman的方法寻找相似性(Proc.Natl.Acad.Sci.U.S.A.,1988)来进行,通过这些算法的计算机化实施(威斯康星遗传学软件包7.0版中的GAP、BESTFIT、FASTA和TFASTA,Genetic Computer Group,575,Science Drive,Madison,Wisconsin)或者例如使用公共可用的计算机软件例如BLAST。当使用这种软件时,优选使用默认参数,例如空位罚分或延伸罚分。选择由各种方法产生的最佳比对(即整个比较窗口范围内产生最高的同一性百分比)。About sequence identity. According to methods known in the art, sequence identity is calculated by sequence alignment. In order to determine the percent identity of two amino acid sequences, the sequences are aligned for optimal comparison. For example, a gap can be introduced in the sequence of the first amino acid sequence so as to optimally align with the second amino acid sequence. The amino acid residues at the corresponding amino acid positions are then compared. When the position in the first sequence is occupied by the same amino acid residue at the corresponding position in the second sequence, the molecules are identical at that position. The percent identity between the two sequences is a function of the number of identical positions shared by the sequences. Therefore, % identity = number of identical positions/total number of overlapping positions multiplied by 100. In this comparison, the sequences can be the same length or can be different lengths. The optimal sequence alignment for determining the comparison window can be performed by the local homology algorithm of Smith and Waterman (J. Theor. Biol., 1981), by the homology alignment algorithm of Needleman and Wunsch (J. Mol. Biol, 1972), by the method of Pearson and Lipman to find similarity (Proc. Natl. Acad. Sci. U.S.A., 1988), by computerized implementation of these algorithms (GAP, BESTFIT, FASTA and TFASTA in Wisconsin Genetics Software Package Version 7.0, Genetic Computer Group, 575, Science Drive, Madison, Wisconsin) or, for example, using publicly available computer software such as BLAST. When using such software, it is preferred to use default parameters, such as gap penalties or extension penalties. The optimal alignment produced by various methods (i.e., the highest identity percentage produced within the entire comparison window range) is selected.
术语“癌症”是指细胞表现出相对异常、不受控制和/或自主生长,从而它们显示出异常升高的增殖速率和/或异常生长表型的疾病、病症或疾患,所述疾病、病症或疾患的特征在于对细胞增殖的控制显著丧失。在一些实施方案中,癌症的特征可以是一种或多种肿瘤。在一些实施方案中,癌症可以是或包括癌前(例如,良性)、恶性、转移前、转移性和/或非转移性的细胞。在一些实施方案中,相关的癌症的特征可以是实体瘤。在一些实施方案中,相关的癌症的特征可以是血液肿瘤。通常,本领域已知的不同类型的癌症的实例包括例如造血系统癌症,包括白血病、淋巴瘤(霍奇金(Hodgkin’s)淋巴瘤和非霍奇金淋巴瘤)、骨髓瘤和骨髓增生性疾病;肉瘤、黑素瘤、腺瘤、实体组织癌、口腔、咽喉、喉和肺的鳞状细胞癌、肝癌、泌尿生殖系统癌(诸如前列腺癌、宫颈癌、膀胱癌、子宫癌、子宫内膜癌和肾细胞癌)、骨癌、胰腺癌、皮肤癌、皮肤或眼内黑素瘤、内分泌系统癌症、甲状腺癌、甲状旁腺癌、头颈癌、脑瘤、乳腺癌、胃肠癌和神经系统癌症、良性病变(诸如乳头状瘤)等等。The term "cancer" refers to a disease, disorder or condition in which cells exhibit relatively abnormal, uncontrolled and/or autonomous growth, such that they exhibit abnormally elevated proliferation rates and/or abnormal growth phenotypes, characterized by a significant loss of control over cell proliferation. In some embodiments, the characteristic of cancer may be one or more tumors. In some embodiments, cancer may be or include precancerous (e.g., benign), malignant, pre-metastatic, metastatic and/or non-metastatic cells. In some embodiments, the characteristic of a related cancer may be a solid tumor. In some embodiments, the characteristic of a related cancer may be a blood tumor. In general, examples of different types of cancer known in the art include, for example, cancers of the hematopoietic system, including leukemias, lymphomas (Hodgkin's and non-Hodgkin's lymphomas), myelomas and myeloproliferative disorders; sarcomas, melanomas, adenomas, solid tissue cancers, squamous cell carcinomas of the oral cavity, pharynx, larynx and lung, liver cancer, genitourinary cancers (such as prostate cancer, cervical cancer, bladder cancer, uterine cancer, endometrial cancer and renal cell carcinoma), bone cancer, pancreatic cancer, skin cancer, cutaneous or intraocular melanoma, cancers of the endocrine system, thyroid cancer, parathyroid cancer, head and neck cancer, brain tumors, breast cancer, gastrointestinal cancer and nervous system cancers, benign lesions (such as papilloma), and the like.
术语“抗癌剂”具有其所属领域理解的含义,是指一种或多种促细胞凋亡剂、细胞抑制剂和/或细胞毒性剂,例如特别包括用于和/或推荐用于治疗一种或多种与不期望的细胞增殖相关的疾病、病症或疾患的药剂。在一些实施方案中,抗癌剂可以是或包括一种或多种烷基剂、一种或多种蒽环类药物、一种或多种细胞骨架破坏剂(例如微管靶向部分,诸如紫杉烷、美登素及其类似物)、一种或多种埃博霉素、一种或多种组蛋白脱乙酰基酶抑制剂HDAC、一种或多种拓扑异构酶抑制剂(例如,拓扑异构酶I和/或拓扑异构酶II的抑制剂)、一种或多种激酶抑制剂、一种或多种核苷酸类似物或核苷酸前体类似物、一种或多种肽抗生素、一种或多种基于铂的药剂、一种或多种类维生素A、一种或多种长春花生物碱、和/或以下一者或多者的一种或多种类似物(即,共有相关的抗增殖活性)。在一些特定实施方案中,抗癌剂可以是或包括以下一者或多者:BCNU、放线菌素(Actinomycin)、全反式视黄酸、奥瑞斯他汀(Auiristatin)、阿扎胞苷(Azacitidine)、硫唑嘌呤(Azathioprine)、博来霉素(Bleomycin)、硼替佐米(Bortezomib)、卡铂(Carboplatin)、卡培他滨(Capecitabine)、顺铂(Cisplatin)、苯丁酸氮芥(Chlorambucil)、环磷酰胺(Cyclophosphamide)、姜黄素(Curcumin)、阿糖胞苷(Cytarabine)、道诺霉素(Daunorubicin)、多西他赛(Docetaxel)、脱氧氟尿苷(Doxifluridine)、多柔比星(Doxorubicin)、表柔比星(Epirubicin)、埃博霉素(Epothilone)、依托泊苷(Etoposide)、氟尿嘧啶(Fluorouracil)、吉西他滨(Gemcitabine)、羟基脲(Hydroxyurea)、伊达比星(Idarubicin)、伊马替尼(Imatinib)、伊立替康(Irinotecan)、美登素(Maytansine)和/或它们的类似物(例如,DM1)、双氯乙基甲胺(Mechlorethamine)、巯基嘌呤(Mercaptopurine)、氨甲蝶呤(Methotrexate)、米托蒽醌(Mitoxantron e)、美登木素(Maytansinoid)、奥沙利铂(Oxaliplatin)、紫杉醇(Paclitaxel)、培美曲塞(Pemetrexed)、替尼泊苷(Teniposide)、硫鸟嘌呤(Tioguanine)、托泊替康(Topotecan)、戊柔比星(Valrubicin)、长春花碱(Vinblastine)、长春新碱(Vincristine)、长春地辛(Vindesine)、长春瑞滨(Vinorelbine)以及它们的组合。The term "anticancer agent" has its art-understood meaning and refers to one or more pro-apoptotic, cytostatic and/or cytotoxic agents, for example, particularly including agents used and/or recommended for the treatment of one or more diseases, disorders or conditions associated with undesirable cell proliferation. In some embodiments, the anticancer agent can be or include one or more alkyl agents, one or more anthracyclines, one or more cytoskeletal disruptors (e.g., microtubule targeting moieties such as taxanes, maytansine and their analogs), one or more epothilones, one or more histone deacetylase inhibitors HDAC, one or more topoisomerase inhibitors (e.g., inhibitors of topoisomerase I and/or topoisomerase II), one or more kinase inhibitors, one or more nucleotide analogs or nucleotide precursor analogs, one or more peptide antibiotics, one or more platinum-based agents, one or more retinoids, one or more vinca alkaloids, and/or one or more analogs of one or more of the following (i.e., sharing relevant antiproliferative activity). In some specific embodiments, the anticancer agent can be or include one or more of the following: BCNU, Actinomycin, all-trans retinoic acid, auristatin, azacitidine, azathioprine, bleomycin, bortezomib, carboplatin, capecitabine, cisplatin, chlorambucil, ambucil), cyclophosphamide, curcumin, cytarabine, daunorubicin, docetaxel, doxifluridine, doxorubicin, epirubicin, epothilone, etoposide, fluorouracil, Gemcitabine, Hydroxyurea, Idarubicin, Imatinib, Irinotecan, Maytansine and/or their analogs (e.g., DM1), Mechlorethamine, Mercaptopurine, Methotrexate, Mitoxantrone, Maytansine The invention relates to vinblastine, vinblastine, vincristine, vindesine, vinorelbine and combinations thereof.
术语“药物组合物”,本发明涉及包括治疗有效量的本发明的多肽以及药学可接受载体或赋形剂的药物组合物。如本发明所用,“药学可接受载体”或“药学可接受赋形剂”包括任何和所有的溶剂、分散介质、涂层、抗菌和抗真菌剂、等渗和吸收延迟剂和生理学可相容的类似物。药学可接受载体或赋形剂的例子包括以下的一种或更多种:水、盐水、磷酸缓冲盐水、葡萄糖、甘油、乙醇和类似物以及其组合。在任何情况下,优选地在组合物中其包括等渗剂,例如,糖,多元醇,例如甘露醇、山梨糖醇,或氯化钠。也可以包括药学可接受的物质,例如润湿量或微量的辅助物质,例如提高抗体或抗体部分的存放时间和有效性的润湿或乳化剂、防腐剂或缓冲剂。任选地,可以包括崩解剂,例如交联聚乙烯基吡咯烷酮、琼脂、海藻酸或其盐,例如海藻酸钠。除赋形剂之外,药物组合物还可以包括以下的一种或更多种:载体蛋白质例如血清白蛋白、缓冲剂、结合剂、甜味剂和其他调味剂;着色剂和聚乙二醇。The term "pharmaceutical composition" refers to a pharmaceutical composition comprising a therapeutically effective amount of a polypeptide of the present invention and a pharmaceutically acceptable carrier or excipient. As used herein, a "pharmaceutically acceptable carrier" or "pharmaceutically acceptable excipient" includes any and all solvents, dispersion media, coatings, antibacterial and antifungal agents, isotonic and absorption delaying agents, and physiologically compatible analogs. Examples of pharmaceutically acceptable carriers or excipients include one or more of the following: water, saline, phosphate buffered saline, glucose, glycerol, ethanol, and the like, and combinations thereof. In any case, preferably in the composition it includes an isotonic agent, for example, a sugar, a polyol, such as mannitol, sorbitol, or sodium chloride. Pharmaceutically acceptable substances may also be included, such as a wetting amount or a trace amount of auxiliary substances, such as a wetting or emulsifier, preservative, or buffer that increases the shelf life and effectiveness of the antibody or antibody portion. Optionally, a disintegrant may be included, such as cross-linked polyvinyl pyrrolidone, agar, alginic acid or a salt thereof, such as sodium alginate. In addition to excipients, pharmaceutical compositions may also include one or more of the following: carrier proteins such as serum albumin, buffers, binders, sweeteners and other flavoring agents; colorants and polyethylene glycol.
组合物可以是许多种形式,例如,液体、半固体和固体剂型,例如液体溶液(如可注射溶液和可输注溶液)、分散液或悬浮液、片剂、丸药、粉末、脂质体和栓剂。优选的形式将取决于既定的给药途径和治疗应用。在一个实施方式中,组合物是可注射或可输注液体的形式,例如类似于用抗体对人进行被动免疫使用的那些形式。在一个实施方式中,给药方式是肠胃外(例如静脉内、皮下、腹膜内、肌肉内)、在一个实施方式中,通过静脉内注射或输注给予多肽。在另一实施方式中,通过肌肉内或皮下注射给予多肽。The composition can be in many forms, for example, liquid, semisolid and solid dosage forms, such as liquid solutions (such as injectable solutions and infusible solutions), dispersions or suspensions, tablets, pills, powders, liposomes and suppositories. The preferred form will depend on the established route of administration and therapeutic application. In one embodiment, the composition is in the form of an injectable or infusible liquid, such as those forms similar to those used for passive immunization of humans with antibodies. In one embodiment, the mode of administration is parenteral (e.g., intravenous, subcutaneous, intraperitoneal, intramuscular), in one embodiment, the polypeptide is administered by intravenous injection or infusion. In another embodiment, the polypeptide is administered by intramuscular or subcutaneous injection.
其他适合用于该药物组合物的给药途径包括,但不限于,直肠、透皮、阴道、透粘膜或肠内给药。Other suitable routes of administration for the pharmaceutical composition include, but are not limited to, rectal, transdermal, vaginal, transmucosal or enteral administration.
用于合成氯毒素类似物的多肽(如本文描述的)的方法在本领域中是已知的。在一些肽合成方法中,一个氨基酸(或氨基酸衍生物)的氨基连接于另一个氨基酸(或氨基酸衍生物)的羧基,该羧基通过它和试剂如二环己基碳二亚胺(DCC)的反应来活化。当自由氨基和活化羧基起化学反应时,会形成肽键并释放二环己基脲。在这样的方法中,可以封闭(“保护”)其它潜在活性基团(如N端氨基酸或氨基酸衍生物的α–氨基和C端氨基酸或氨基酸衍生物的羧基),以使其避免参与化学反应。因而,仅特定的活性基团进行反应,以致形成所期望的产物。可用于此目的保护基团包括但不限于用来保护胺基的叔丁氧炭基(t-Boc)和苯甲酰氧基)基;以及用来保护羧基的简单酯(如甲基和乙基)和酯。通常可以借助于留下完好的肽键的处理(例如,用稀酸进行的处理)来随后除去保护基团可以重复保护反应基团(其不应反应)、耦合以形成肽键、和对反应基团进行去保护的过程。可以通过将氨基酸依次加入一个生长的肽链来合成肽。按照本发明,液相和固相肽合成方法均是适用的。在固相肽合成方法中,通常通过将C端氨基酸连接于基质来将生长肽链连接于不溶性基质(如,例如,聚苯乙烯珠)。在合成结束时,可以利用并不破坏肽键的剪切试剂,如氢氟酸(HF)来从基质释放肽。此时,还通常除去保护基团。按照本发明,还可以使用自动化的、高通量、和/或平行肽合成方法。关于肽合成方法的更多信息,参见,例如,Merrifield(1969)“Solid-phase peptide synthesis,”Adv Enzymol RelatAreas Mol Biol.,32:221-96;Fridkin et al.(1974)Annu Rev Biochem.,43(0):419-43;Merrifield(1997)“Concept and Early Development of Solid Phase PeptideSynthesis,”Methods in Enzymology,289:3-13;Sabatino et al.(2009)“Advances inautomatic,manual and microwave-assisted solid-phase peptide synthesis,"Curr0pin Drug Discov Devel.,11(6):762-70,上述各自的全部内容以引用方式结合于本文。Methods for synthesizing chlorotoxin analog polypeptides (such as described herein) are known in the art. In some peptide synthesis methods, the amino group of one amino acid (or amino acid derivative) is linked to the carboxyl group of another amino acid (or amino acid derivative), which is activated by reaction with a reagent such as dicyclohexylcarbodiimide (DCC). When the free amino group and the activated carboxyl group react chemically, a peptide bond is formed and dicyclohexylurea is released. In such methods, other potentially reactive groups (such as the α -amino group of the N-terminal amino acid or amino acid derivative and the carboxyl group of the C-terminal amino acid or amino acid derivative) can be blocked ("protected") to prevent them from participating in the chemical reaction. Thus, only specific reactive groups react to form the desired product. Protecting groups that can be used for this purpose include, but are not limited to, tert-butyloxycarbonyl (t-Boc) and benzoyloxy) groups for protecting amine groups; and simple esters (such as methyl and ethyl) and esters for protecting carboxyl groups. The protecting groups can usually be subsequently removed by treatment that leaves the peptide bonds intact (e.g., treatment with dilute acid). The process of protecting reactive groups (which should not react), coupling to form peptide bonds, and deprotecting the reactive groups can be repeated. Peptides can be synthesized by sequentially adding amino acids to a growing peptide chain. According to the present invention, both liquid and solid phase peptide synthesis methods are applicable. In solid phase peptide synthesis methods, the growing peptide chain is usually connected to an insoluble matrix (such as, for example, polystyrene beads) by connecting the C-terminal amino acid to the matrix. At the end of the synthesis, a shearing agent that does not destroy the peptide bonds, such as hydrofluoric acid (HF), can be used to release the peptide from the matrix. At this point, the protecting groups are also usually removed. According to the present invention, automated, high throughput, and/or parallel peptide synthesis methods can also be used. For more information on peptide synthesis methods, see, e.g., Merrifield (1969) "Solid-phase peptide synthesis," Adv Enzymol Relat Areas Mol Biol., 32: 221-96; Fridkin et al. (1974) Annu Rev Biochem., 43(0): 419-43; Merrifield (1997) "Concept and Early Development of Solid Phase Peptide Synthesis," Methods in Enzymology, 289: 3-13; Sabatino et al. (2009) "Advances inautomatic, manual and microwave-assisted solid-phase peptide synthesis," CurrOpin Drug Discov Devel., 11(6): 762-70, the entire contents of each of which are incorporated herein by reference.
另外,本发明公开的多肽、包括它们的盐,也可以以它们的水合物形式或包含其溶剂(例如乙醇,DMSO,等等)的形式存在,并可用于结晶。本发明公开化合物可以与药学上可接受的溶剂(包括水)固有地或通过设计形成溶剂化物;因此,本发明化合物包括溶剂化的和未溶剂化的形式。In addition, the polypeptides disclosed in the present invention, including their salts, may also exist in the form of their hydrates or in the form of containing their solvents (e.g., ethanol, DMSO, etc.), and may be used for crystallization. The compounds disclosed in the present invention may inherently or by design form solvates with pharmaceutically acceptable solvents (including water); therefore, the compounds of the present invention include solvated and unsolvated forms.
图1:化合物17液相检测结果;Figure 1: Liquid phase detection results of compound 17;
图2:化合物17液质联用检测结果;Figure 2: LC-MS detection results of compound 17;
图3:化合物20液相检测结果;Figure 3: Liquid phase detection results of compound 20;
图4:化合物20液质联用检测结果;Figure 4: LC-MS detection results of compound 20;
图5:化合物21液相检测结果;Figure 5: Liquid phase detection results of compound 21;
图6:化合物21液质联用检测结果;Figure 6: LC-MS detection results of compound 21;
图7:化合物23液相检测结果;Figure 7: Liquid phase detection results of compound 23;
图8:化合物23液质联用检测结果;Figure 8: LC-MS detection results of compound 23;
图9:化合物32液相检测结果;Figure 9: Liquid phase detection results of compound 32;
图10:化合物32液质联用检测结果; Figure 10: LC-MS detection results of compound 32;
图11:测试例1本发明部分PDC分子脑胶质瘤细胞U87-MG的杀伤曲线;Figure 11: Killing curve of some PDC molecules of the present invention on brain glioma cells U87-MG in Test Example 1;
图12:测试例1本发明部分PDC分子脑胶质瘤细胞U373的杀伤曲线;Figure 12: Killing curve of U373 glioma cells of some PDC molecules of the present invention in Test Example 1;
图13:测试例2脑胶质瘤细胞U87-MG内吞多肽分子4h后细胞平均荧光信号统计结果;Figure 13: Statistical results of the average fluorescence signal of the cells in the brain glioma cells U87-MG 4 hours after the internalization of the polypeptide molecules in Test Example 2;
图14:测试例2脑胶质瘤细胞U373内吞多肽分子4h后细胞平均荧光信号统计结果;Figure 14: Statistical results of the average fluorescence signal of the cells in U373 glioma cells of test example 2 after endocytosis of the polypeptide molecule for 4 hours;
图15:测试例2脑胶质瘤细胞U87-MG内吞多肽分子24h后细胞平均荧光信号统计结果;Figure 15: Statistical results of the average fluorescence signal of the cells in the brain glioma cells U87-MG after 24 hours of endocytosis of the polypeptide molecules in Test Example 2;
图16:测试例2脑胶质瘤细胞U373内吞多肽分子24h后细胞平均荧光信号统计结果;Figure 16: Statistical results of the average fluorescence signal of the cells in U373 glioma cells of test example 2 after 24 hours of endocytosis of the polypeptide molecule;
图17:测试例2脑胶质瘤细胞U87-MG内吞多肽分子(3uM)4h后共聚焦成像结果;Figure 17: Confocal imaging results of the endocytosis of polypeptide molecules (3uM) by U87-MG glioma cells in Test Example 2 after 4 hours;
图18:测试例2脑胶质瘤细胞U373内吞多肽分子(3uM)4h后共聚焦成像结果;Figure 18: Confocal imaging results of U373 glioma cells in test example 2 after endocytosis of polypeptide molecules (3uM) for 4 hours;
图19:测试例2脑胶质瘤细胞U87-MG内吞多肽分子(1uM)24h后共聚焦成像结果;Figure 19: Confocal imaging results of the endocytosis of polypeptide molecules (1uM) by U87-MG glioma cells in Test Example 2 after 24 hours;
图20:测试例2脑胶质瘤细胞U373内吞多肽分子(1uM)24h后共聚焦成像结果;Figure 20: Confocal imaging results of U373 glioma cells in test example 2 after endocytosis of polypeptide molecules (1uM) for 24 hours;
图21:测试例3本发明部分PDC分子人血浆稳定性实验结果;Figure 21: Test Example 3: Results of the human plasma stability test of some PDC molecules of the present invention;
图22:测试例4本发明部分PDC分子小鼠血浆稳定性实验结果;FIG22 : Test Example 4: Results of mouse plasma stability test of some PDC molecules of the present invention;
图23:测试例5多肽分子穿透血脑屏障体外评估实验结果;Figure 23: In vitro evaluation results of peptide molecules penetrating the blood-brain barrier in Test Example 5;
图24:化合物24药物-时间曲线,其中,A为脑组织药物-时间曲线,B为血浆药物-时间曲线;Figure 24: Drug-time curve of compound 24, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
图25:化合物25药物-时间曲线,其中,A为脑组织药物-时间曲线,B为血浆药物-时间曲线;Figure 25: Drug-time curve of compound 25, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
图26:化合物26药物-时间曲线,其中,A为脑组织药物-时间曲线,B为血浆药物-时间曲线;Figure 26: Drug-time curve of compound 26, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
图27:化合物27药物-时间曲线,其中,A为脑组织药物-时间曲线,B为血浆药物-时间曲线;Figure 27: Drug-time curve of compound 27, wherein A is the drug-time curve of brain tissue and B is the drug-time curve of plasma;
图28:AUC血脑比计算结果。Figure 28: AUC blood-brain ratio calculation results.
本公开提供的多肽化合物及其衍生物采用固相合成的方法合成其直链前体,合成载体为Rink Amide-AM Resin树脂。合成过程中,首先将Rink Amide-AM Resin树脂在N,N-二甲基甲酰胺(DMF)中充分溶胀,然后该固相载体与活化后氨基酸衍生物重复缩合→洗涤→去保护Fmoc→洗涤→下一轮氨基酸缩合的操作以达到所要合成的多肽链长度,再在固相上完成N端酰胺化,偶联AEEA和FITC或者偶联十四烷二酸,之后用三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)的混合溶液与树脂反应将多肽从固相载体上裂解下来,再由冷冻甲基叔丁基醚沉降后得到直链前体的固体粗品。切割后的直链前体粗品在弱碱性溶液中进行二硫键氧化后使用0.1%三氟乙酸的乙腈/水的体系由C-18反相制备色谱柱纯化分离后得到氧化后多肽,得到的氧化后多肽在液相中偶联PTX缀合物,反应后再通过0.1%三氟乙酸的乙腈/水的体系由C-18反相制备色谱柱纯化分离后得到多肽及其衍生物的纯品。The polypeptide compounds and derivatives provided by the present invention are synthesized by solid phase synthesis method to synthesize their linear precursors, and the synthetic carrier is Rink Amide-AM Resin resin. In the synthesis process, the Rink Amide-AM Resin resin is first fully swollen in N,N-dimethylformamide (DMF), and then the solid phase carrier and the activated amino acid derivative are repeatedly condensed → washed → Fmoc protection → washed → the next round of amino acid condensation to achieve the desired length of the synthesized polypeptide chain, and then the N-terminal amidation is completed on the solid phase, AEEA and FITC are coupled or tetradecanedioic acid is coupled, and then a mixed solution of trifluoroacetic acid: water: triisopropylsilane: anisyl thioether (90: 2.5: 2.5: 5:, v: v: v: v) is reacted with the resin to cleave the polypeptide from the solid phase carrier, and then the solid crude product of the linear precursor is obtained after precipitation by frozen methyl tert-butyl ether. The crude straight-chain precursor after cleavage is subjected to disulfide bond oxidation in a weakly alkaline solution, and then purified and separated by a C-18 reverse phase preparative chromatography column using a 0.1% trifluoroacetic acid acetonitrile/water system to obtain an oxidized polypeptide. The obtained oxidized polypeptide is coupled with a PTX conjugate in a liquid phase, and after the reaction, it is purified and separated by a C-18 reverse phase preparative chromatography column using a 0.1% trifluoroacetic acid acetonitrile/water system to obtain a pure polypeptide and its derivatives.
实验试剂
Experimental reagents
实施例1.化合物1的制备
Example 1. Preparation of Compound 1
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物1的直链前体肽链M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-RThe linear precursor peptide chain of compound 1 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下:294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次,DCM冲洗树脂5次。树脂在真空中抽干。After the linear peptide synthesis, the resin was washed 5 times with DMF and 5 times with DCM. The resin was dried in vacuo.
步骤2:直链前体肽链切割Step 2: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤1所得树脂中,在室温下振荡反应2h。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) was added to the resin obtained in step 1 and shaken for 2 h at room temperature. After the reaction, the reaction solution was filtered, and the resin was washed with trifluoroacetic acid, combined with the reaction solution, and precipitated with 4 times the volume of cold MTBE to obtain a crude product. The crude product was washed with MTBE 3 times and dried in a vacuum.
步骤3:分子内二硫键形成Step 3: Intramolecular disulfide bond formation
将步骤2得到的粗品加入20%(v:v)DMSO充分溶解,然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的多肽溶液缓慢滴加至上述缓冲液中,终浓度为1mg/mL,室温震荡16h。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 2 was fully dissolved in 20% (v:v) DMSO, and then 2mM GSH was added to 50mM ammonium bicarbonate buffer (pH=8.0, containing 30% acetonitrile). The dissolved peptide solution was slowly added dropwise to the above buffer to a final concentration of 1mg/mL, and shaken at room temperature for 16h. The reaction results were monitored by LC-MS, and purification was performed directly after the reaction was completed.
步骤4:多肽的纯化制备Step 4: Peptide purification
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为20-40%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column. During the purification process, the chromatograph detection wavelength was set to 230nm, the flow rate was 15mL/min, and the gradient was 20-40% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure polypeptide.
步骤5:检测与表征方法Step 5: Detection and characterization methods
将步骤4的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物形成分子内二硫键。The purified polypeptide from step 4 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and intramolecular disulfide bond formation of the compound.
实施例2.化合物3的制备
Example 2. Preparation of Compound 3
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物3的直链前体肽链M(Boc)-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K(Mtt)-C-Y-G-P-Q-C-L-C-RThe linear precursor peptide chain of compound 3 is M(Boc)-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K(Mtt)-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下:294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次,DCM冲洗树脂5次。After the synthesis of the linear peptide, the resin was washed 5 times with DMF and 5 times with DCM.
步骤2:AA27赖氨酸侧链偶联AEEA及FITCStep 2: Coupling of AA27 lysine side chain with AEEA and FITC
脱去赖氨酸侧链Mtt保护基:用DCM将树脂溶胀1h后,在树脂中加入六氟异丙醇/二氯甲烷混合溶液(30%v/v,10mL),室温下振荡反应45分钟后抽除,重复操作一次,反应结束后用DCM冲洗树脂5次,DMF洗涤树脂6次。Removal of the Mtt protecting group of the lysine side chain: After swelling the resin with DCM for 1 h, add a mixed solution of hexafluoroisopropanol/dichloromethane (30% v/v, 10 mL) to the resin, shake the reaction at room temperature for 45 minutes and then remove the solution. Repeat the operation once. After the reaction, rinse the resin with DCM 5 times and DMF 6 times.
赖氨酸侧链偶联AEEA:称取1.0mmol Fmoc-AEEA-OH,1.0mmol 2-肟氰乙酸乙酯溶于8mL DMF中,再加入160uLDIC预活化3min,然后将混合溶液加入至上一步得到的树脂中,震荡反应3h。反应后排干反应液,DMF洗涤4-5次。Lysine side chain coupling AEEA: Weigh 1.0mmol Fmoc-AEEA-OH, 1.0mmol ethyl 2-oximecyanoacetate and dissolve in 8mL DMF, then add 160uLDIC for pre-activation for 3min, then add the mixed solution to the resin obtained in the previous step and shake for 3h. After the reaction, drain the reaction solution and wash with DMF 4-5 times.
脱去Fmoc保护:20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,第一次去保护反应5min,第二次去保护反应20min。反应后排干反应液,DMF冲洗树脂6-8次直到中性pH。Deprotection of Fmoc: 20% piperidine/DMF (20% v/v, 10 mL) was used to perform Fmoc-deprotection twice, the first deprotection reaction lasted 5 min, and the second deprotection reaction lasted 20 min. After the reaction, the reaction solution was drained and the resin was washed with DMF 6-8 times until the pH was neutral.
AEEA的N端偶联FITC:称取0.4mmol FITC溶于5mL DMF中,加入1.0mmol DIEA,然后将混合溶液加入至上一步得到的树脂中,避光震荡反应5h。反应后排干反应液,DMF冲洗树脂6-8次直至排出液体为无色,DCM冲洗树脂5次。树脂在真空中抽干。N-terminal coupling of AEEA with FITC: Weigh 0.4 mmol FITC and dissolve it in 5 mL DMF, add 1.0 mmol DIEA, and then add the mixed solution to the resin obtained in the previous step, and shake it in the dark for 5 hours. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times until the discharged liquid is colorless, and rinse the resin with DCM 5 times. The resin is drained in a vacuum.
步骤3:直链前体肽链切割Step 3: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤2所得树脂中,在室温下振荡反应2h。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Add freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) to the resin obtained in step 2 and shake at room temperature for 2 hours. After the reaction is completed, filter the reaction solution, wash the resin with trifluoroacetic acid, combine it with the reaction solution, and precipitate with 4 times the volume of cold MTBE to obtain a crude product. Wash the crude product 3 times with MTBE and dry it in a vacuum.
步骤4:分子内二硫键形成Step 4: Intramolecular disulfide bond formation
将步骤3得到的粗品加入20%(v:v)DMSO充分溶解,然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的 多肽溶液缓慢滴加至上述缓冲液中,终浓度为0.5mg/mL,室温震荡16h。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 3 was dissolved in 20% (v:v) DMSO, and then 2 mM GSH was added to 50 mM ammonium bicarbonate buffer (pH = 8.0, containing 30% acetonitrile). The peptide solution was slowly added dropwise to the above buffer solution to a final concentration of 0.5 mg/mL and shaken at room temperature for 16 h. The reaction results were monitored by LC-MS and the purification preparation was carried out directly after the reaction was completed.
步骤5:多肽的纯化制备Step 5: Peptide purification and preparation
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为20-40%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column. During the purification process, the chromatograph detection wavelength was set to 230nm, the flow rate was 15mL/min, and the gradient was 20-40% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure polypeptide.
步骤6:检测与表征方法Step 6: Detection and characterization methods
将步骤6的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物完成K27侧链接AEEA和FITC,以及形成分子内二硫键。The purified peptide from step 6 was subjected to analytical HPLC and LC/MS to determine the purity and compound completion of K27 side-linking AEEA and FITC, as well as the formation of intramolecular disulfide bonds.
实施例3.化合物17的制备
Example 3. Preparation of Compound 17
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物17的直链前体肽链M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-R-G-R-G-K-C-Y-G-P-Q-C-L-C-RThe linear precursor peptide chain of compound 17 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-R-G-R-G-K-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下:294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次。After the linear peptide synthesis, the resin was washed 5 times with DMF.
步骤2:N端乙酰化Step 2: N-terminal acetylation
配制10mL乙酰化试剂:500uLL乙酸酐和500uL DIEA溶于9mL DMF中,将配制好的乙酰化试剂10mL加入至步骤1所得树脂中,摇匀,震荡10min。反应后排干反应液,用DMF冲洗树脂6-8次,DCM冲洗树脂5次。树脂在真空中抽干。Prepare 10mL of acetylation reagent: Dissolve 500uL of acetic anhydride and 500uL of DIEA in 9mL of DMF. Add 10mL of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
步骤3:直链前体肽链切割Step 3: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤2所得树脂中,在室温下振荡反应2h。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Add freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) to the resin obtained in step 2 and shake at room temperature for 2 hours. After the reaction is completed, filter the reaction solution, wash the resin with trifluoroacetic acid, combine it with the reaction solution, and precipitate with 4 times the volume of cold MTBE to obtain a crude product. Wash the crude product 3 times with MTBE and dry it in a vacuum.
步骤4:分子内二硫键形成Step 4: Intramolecular disulfide bond formation
将步骤3得到的粗品加入20%(v:v)DMSO充分溶解,然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的多肽溶液缓慢滴加至上述缓冲液中,终浓度为1mg/mL,室温震荡16h。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 3 was fully dissolved in 20% (v:v) DMSO, and then 2mM GSH was added to 50mM ammonium bicarbonate buffer (pH=8.0, containing 30% acetonitrile). The dissolved peptide solution was slowly added dropwise to the above buffer to a final concentration of 1mg/mL, and shaken at room temperature for 16h. The reaction results were monitored by LC-MS, and purification was performed directly after the reaction was completed.
步骤5:氧化后多肽的纯化制备Step 5: Purification and preparation of oxidized peptides
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为20-40%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>75%的馏分合并,冻干,获得氧化后多肽。After filtering through a 0.45um membrane, the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-40% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
步骤6:2-Succinyl PTX合成Step 6: 2-Succinyl PTX Synthesis
将紫杉醇(2g,2.3mmol)和丁二酸酐(1.875g,18.6mmol)溶于20mL无水吡啶,室温搅拌24h。反应完全后,减压除去溶剂,加入水搅拌1h,出现大量白色固体,抽滤,将白色固体50℃过夜干燥,得到丁二酰紫杉醇。Paclitaxel (2 g, 2.3 mmol) and succinic anhydride (1.875 g, 18.6 mmol) were dissolved in 20 mL of anhydrous pyridine and stirred at room temperature for 24 h. After the reaction was complete, the solvent was removed under reduced pressure, water was added and stirred for 1 h, and a large amount of white solid appeared. The white solid was filtered and dried at 50 ° C overnight to obtain succinyl paclitaxel.
步骤7:2-NHS-Succinyl PTX合成Step 7: Synthesis of 2-NHS-Succinyl PTX
将步骤6得到的2-Succinyl PTX(2146.5mg,2.25mmol),N-羟基丁二酰亚胺(388.5mg,3.375mmol)混合,加入65mL DCM(CH2Cl2)使其充分溶解。再加入DCC(696.4mg,3.375mmol)到反应体系中,室温搅拌4.5h后减压除去溶剂得到白色固体。然后将白色固体用饱和食盐水和乙酸乙酯萃取3-5次,合并有机相。将有机相用无水硫酸钠干燥、过滤。减压除去溶剂,出现大量白色固体,得到粗品2-NHS-PTX。经C18反相色谱柱纯化,冻干后得到纯2-NHS-PTX。纯化方法:DMSO:乙腈1:1溶解样品,C18反相色谱柱纯化,梯度为50-90%(流动相为纯水和纯乙腈,不含TFA)2-Succinyl PTX (2146.5 mg, 2.25 mmol) obtained in step 6 and N-hydroxysuccinimide (388.5 mg, 3.375 mmol) were mixed and 65 mL of DCM (CH 2 Cl 2 ) was added to fully dissolve them. Then DCC (696.4 mg, 3.375 mmol) was added to the reaction system, stirred at room temperature for 4.5 h, and the solvent was removed under reduced pressure to obtain a white solid. The white solid was then extracted with saturated brine and ethyl acetate for 3-5 times, and the organic phases were combined. The organic phase was dried over anhydrous sodium sulfate and filtered. The solvent was removed under reduced pressure, and a large amount of white solid appeared to obtain crude 2-NHS-PTX. Purification by C18 reverse phase chromatography column, lyophilization to obtain pure 2-NHS-PTX. Purification method: DMSO: acetonitrile 1:1 dissolved sample, C18 reverse phase chromatography column purification, gradient of 50-90% (mobile phase is pure water and pure acetonitrile, without TFA)
步骤8:多肽偶联PTX缀合物Step 8: Peptide coupling to PTX conjugate
称取步骤5所得多肽20mg,加入6.8mL DMSO溶解多肽。称取步骤7所得2-NHS-PTX(3eq),加入6.8mL DMSO使其充分溶解,再缓慢滴加6.4mL 1×PBS至溶液中,此时溶液有明显放热。将溶液放置4℃冷却5-10min。冷却后,将多肽溶液缓慢滴加至2-NHS-PTX缓冲液中,终浓度为1mg/mL,摇匀,室温反应1-2h。LC-MS监测反应结果,反应结束后直接进行纯化制备。Weigh 20 mg of the peptide obtained in step 5 and add 6.8 mL DMSO to dissolve the peptide. Weigh 2-NHS-PTX (3 eq) obtained in step 7, add 6.8 mL DMSO to fully dissolve it, and then slowly add 6.4 mL 1×PBS to the solution. At this time, the solution has obvious heat release. Cool the solution at 4°C for 5-10 minutes. After cooling, slowly add the peptide solution to the 2-NHS-PTX buffer solution with a final concentration of 1 mg/mL, shake well, and react at room temperature for 1-2 hours. Monitor the reaction results by LC-MS, and purify and prepare directly after the reaction.
步骤9:目标多肽的纯化制备Step 9: Purification of target peptide
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为30-60%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column. During the purification process, the chromatograph detection wavelength was set to 230nm, the flow rate was 15mL/min, and the gradient was 30-60% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure peptide.
步骤10:检测与表征方法Step 10: Detection and Characterization Methods
将步骤9的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物完成N端乙酰化,K27侧链接PTX缀合物以及形成分子内二硫键。检测结果如图1、图2所示。The purified peptide from step 9 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and compound completion of N-terminal acetylation, K27 side-linked PTX conjugate, and formation of intramolecular disulfide bonds. The test results are shown in Figures 1 and 2.
实施例4.化合物20的制备
Example 4. Preparation of Compound 20
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物20的直链前体肽链M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-RThe linear precursor peptide chain of compound 20 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下:294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次。After the linear peptide synthesis, the resin was washed 5 times with DMF.
步骤2:N端乙酰化Step 2: N-terminal acetylation
配制10ml乙酰化试剂:500ul乙酸酐和500ul DIEA溶于9ml DMF中,将配制好的乙酰化试剂10ml加入至步骤1所得树脂中,摇匀,震荡10min。反应后排干反应液,用DMF冲洗树脂6-8次,DCM冲洗树脂5次。树脂在真空中抽干。Prepare 10 ml of acetylation reagent: Dissolve 500 ul of acetic anhydride and 500 ul of DIEA in 9 ml of DMF. Add 10 ml of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
步骤3:直链前体肽链切割Step 3: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤2所得树脂中,在室温下振荡反应2小时。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) was added to the resin obtained in step 2 and shaken for 2 hours at room temperature. After the reaction, the reaction solution was filtered, and the resin was washed with trifluoroacetic acid, combined with the reaction solution, and precipitated with 4 times the volume of cold MTBE to obtain a crude product. The crude product was washed with MTBE 3 times and dried in a vacuum.
步骤4:分子内二硫键形成Step 4: Intramolecular disulfide bond formation
将步骤3得到的粗品加入DMSO充分溶解(DMSO体积为反应体系总体积的20%),然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的多肽溶液缓慢滴加至上述缓冲液中,终浓度为1mg/ml,室温震荡16小时。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 3 was fully dissolved in DMSO (the volume of DMSO was 20% of the total volume of the reaction system), and then 2mM GSH was added to 50mM ammonium bicarbonate buffer (pH=8.0, containing 30% acetonitrile). The dissolved peptide solution was slowly added dropwise to the above buffer to a final concentration of 1mg/ml, and shaken at room temperature for 16 hours. The reaction results were monitored by LC-MS, and purification was performed directly after the reaction was completed.
步骤5:氧化后多肽的纯化制备Step 5: Purification and preparation of oxidized peptides
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为20-50%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>75%的馏分合并,冻干,获得氧化后多肽。After filtering through a 0.45um membrane, the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-50% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
步骤6:2-Succinyl PTX合成Step 6: 2-Succinyl PTX Synthesis
将紫杉醇(2g,2.3mmol)和丁二酸酐(1.875g,18.6mmol)溶于20mL无水吡啶,室温搅拌24小时。反应完全后,减压除去溶剂,加入水搅拌1小时,出现大量白色固体,抽滤,将白色固体50℃过夜干燥,得到丁二酰紫杉醇。Paclitaxel (2 g, 2.3 mmol) and succinic anhydride (1.875 g, 18.6 mmol) were dissolved in 20 mL of anhydrous pyridine and stirred at room temperature for 24 hours. After the reaction was complete, the solvent was removed under reduced pressure, water was added and stirred for 1 hour, and a large amount of white solid appeared. The white solid was filtered and dried at 50°C overnight to obtain succinyl paclitaxel.
步骤7:2-NHS-Succinyl PTX合成Step 7: Synthesis of 2-NHS-Succinyl PTX
将步骤6得到的2-Succinyl PTX(2146.5mg,2.25mmol),N-羟基丁二酰亚胺(388.5mg,3.375mmol)混合,加入65mL DCM(CHCl2)使其充分溶解。再加入DCC(696.4mg,3.375mmol)到反应体系中,室温搅拌4.5h后减压除去溶剂得到白色固体。然后将白色固体用饱和食盐水和乙酸乙酯萃取3-5次,合并有机相。将有机相用无水硫酸钠干燥、过滤。减压除去溶剂,出现大量白色固体,得到粗品2-NHS-PTX。经C18反相色谱柱纯化,冻干后得到纯2-NHS-PTX。纯化方法:DMSO:乙腈1:1溶解样品,C18反相色谱柱纯化,梯度为50-90%(流动相为纯水和纯乙腈,不含TFA)Mix 2-Succinyl PTX (2146.5 mg, 2.25 mmol) obtained in step 6 and N-hydroxysuccinimide (388.5 mg, 3.375 mmol), add 65 mL DCM (CHCl2) to fully dissolve it. Add DCC (696.4 mg, 3.375 mmol) to the reaction system, stir at room temperature for 4.5 hours, and remove the solvent under reduced pressure to obtain a white solid. Then extract the white solid with saturated brine and ethyl acetate 3-5 times, and combine the organic phases. Dry the organic phase with anhydrous sodium sulfate and filter. Remove the solvent under reduced pressure, a large amount of white solid appears, and crude 2-NHS-PTX is obtained. Purify it with a C18 reverse phase column and freeze-dry it to obtain pure 2-NHS-PTX. Purification method: dissolve the sample in DMSO: acetonitrile 1:1, purify it with a C18 reverse phase column, and purify it with a gradient of 50-90% (the mobile phase is pure water and pure acetonitrile, without TFA)
步骤8:多肽偶联PTX缀合物Step 8: Peptide coupling to PTX conjugate
称取步骤5所得多肽20mg,加入13.6ml DMSO溶解多肽。称取步骤7所得2-NHS-PTX(6eq),加入13.6ml DMSO使其充分溶解,再缓慢滴加12.8ml 1×PBS至溶液中,此时溶液有明显放热。将溶液放置4℃冷却5-10min。冷却后,将多肽溶液缓慢滴加至2-NHS-PTX缓冲液中,终浓度为0.5mg/ml,摇匀,室温反应过夜。LC-MS监测反应结果,反应结束后直接进行纯化制备。Weigh 20 mg of the peptide obtained in step 5, add 13.6 ml DMSO to dissolve the peptide. Weigh 2-NHS-PTX (6 eq) obtained in step 7, add 13.6 ml DMSO to fully dissolve it, and then slowly drop 12.8 ml 1×PBS into the solution. At this time, the solution has obvious heat release. Cool the solution at 4°C for 5-10 minutes. After cooling, slowly add the peptide solution to the 2-NHS-PTX buffer solution with a final concentration of 0.5 mg/ml, shake well, and react at room temperature overnight. Monitor the reaction results by LC-MS, and directly purify and prepare after the reaction.
步骤9:目标多肽的纯化制备Step 9: Purification of target peptide
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR-C18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为40-80%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR-C18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 40-80% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure polypeptide.
步骤10:检测与表征方法Step 10: Detection and Characterization Methods
将步骤9的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物完成N端乙酰化,K23,K27侧链接PTX缀合物以及形成分子内二硫键。检测结果如图3、图4所示。The purity of the peptide in step 9 was determined by analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to confirm that the compound completed N-terminal acetylation, K23, K27 side-linked PTX conjugates, and formed intramolecular disulfide bonds. The test results are shown in Figures 3 and 4.
实施例5.化合物21的制备
Example 5. Preparation of Compound 21
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物21的直链前体肽链M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-RThe linear precursor peptide chain of compound 21 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下:294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次。After the linear peptide synthesis, the resin was washed 5 times with DMF.
步骤2:N端乙酰化Step 2: N-terminal acetylation
配制10mL乙酰化试剂:500uL乙酸酐和500uL DIEA溶于9mL DMF中,将配制好的乙酰化试剂10mL加入至步骤1所得树脂中,摇匀,震荡10min。反应后排干反应液,用DMF冲洗树脂6-8次,DCM冲洗树脂5次。树脂在真空中抽干。Prepare 10mL of acetylation reagent: Dissolve 500uL of acetic anhydride and 500uL of DIEA in 9mL of DMF. Add 10mL of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
步骤3:直链前体肽链切割Step 3: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤2所得树脂中,在室温下振荡反应2h。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Add freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) to the resin obtained in step 2 and shake at room temperature for 2 hours. After the reaction is completed, filter the reaction solution, wash the resin with trifluoroacetic acid, combine it with the reaction solution, and precipitate with 4 times the volume of cold MTBE to obtain a crude product. Wash the crude product 3 times with MTBE and dry it in a vacuum.
步骤4:分子内二硫键形成Step 4: Intramolecular disulfide bond formation
将步骤3得到的粗品加入20%(v:v)DMSO充分溶解,然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的多肽溶液缓慢滴加至上述缓冲液中,终浓度为1mg/mL,室温震荡16h。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 3 was fully dissolved in 20% (v:v) DMSO, and then 2mM GSH was added to 50mM ammonium bicarbonate buffer (pH=8.0, containing 30% acetonitrile). The dissolved peptide solution was slowly added dropwise to the above buffer to a final concentration of 1mg/mL, and shaken at room temperature for 16h. The reaction results were monitored by LC-MS, and purification was performed directly after the reaction was completed.
步骤5:氧化后多肽的纯化制备Step 5: Purification and preparation of oxidized peptides
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为20-50%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>75%的馏分合并,冻干,获得氧化后多肽。After filtering through a 0.45um membrane, the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-50% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
步骤6:2-Succinyl PTX合成Step 6: 2-Succinyl PTX Synthesis
将紫杉醇(2g,,2.3mmol)和丁二酸酐(1.875g,18.6mmol)溶于20mL无水吡啶,室温搅拌24h。反应完全后,减压除去溶剂,加入水搅拌1h,出现大量白色固体,抽滤,将白色固体50℃过夜干燥,得到丁二酰紫杉醇。Paclitaxel (2 g, 2.3 mmol) and succinic anhydride (1.875 g, 18.6 mmol) were dissolved in 20 mL of anhydrous pyridine and stirred at room temperature for 24 h. After the reaction was complete, the solvent was removed under reduced pressure, water was added and stirred for 1 h, and a large amount of white solid appeared. The white solid was filtered and dried at 50 ° C overnight to obtain succinyl paclitaxel.
步骤7:2-NHS-Succinyl PTX合成Step 7: Synthesis of 2-NHS-Succinyl PTX
将步骤6得到的2-Succinyl PTX(2146.5mg,2.25mmol),N-羟基丁二酰亚胺(388.5mg,3.375mmol)混合,加入65mL DCM(CH2Cl2)使其充分溶解。再加入DCC(696.4mg,3.375mmol)到反应体系中,室温搅拌4.5h后减压除去溶剂得到白色固体。然后将白色固体用饱和食盐水和乙酸乙酯萃取3-5次,合并有机相。将有机相用无水硫酸钠干燥、过滤。减压除去溶剂,出现大量白色固体,得到粗品2-NHS-PTX。经C18反相色谱柱纯化,冻干后得到纯2-NHS-PTX。纯化方法:DMSO:乙腈1:1溶解样品,C18反相色谱柱纯化,梯度为50-90%(流动相为纯水和纯乙腈,不含TFA)。2-Succinyl PTX (2146.5 mg, 2.25 mmol) obtained in step 6 and N-hydroxysuccinimide (388.5 mg, 3.375 mmol) were mixed and 65 mL of DCM (CH 2 Cl 2 ) was added to fully dissolve them. Then DCC (696.4 mg, 3.375 mmol) was added to the reaction system, stirred at room temperature for 4.5 h, and the solvent was removed under reduced pressure to obtain a white solid. The white solid was then extracted with saturated brine and ethyl acetate for 3-5 times, and the organic phases were combined. The organic phase was dried over anhydrous sodium sulfate and filtered. The solvent was removed under reduced pressure, and a large amount of white solid appeared to obtain crude 2-NHS-PTX. Purification by C18 reverse phase chromatography column, freeze-dried to obtain pure 2-NHS-PTX. Purification method: DMSO: acetonitrile 1:1 dissolved sample, C18 reverse phase chromatography column purification, gradient 50-90% (mobile phase is pure water and pure acetonitrile, without TFA).
步骤8:多肽偶联PTX缀合物Step 8: Peptide coupling to PTX conjugate
称取步骤5所得多肽20mg,加入13.6mL DMSO溶解多肽。称取步骤7所得2-NHS-PTX(6eq),加入13.6mL DMSO使其充分溶解,再缓慢滴加12.8mL 1×PBS至溶液中,此时溶液有明显放热。将溶液放置4℃冷却5-10min。冷却后,将多肽溶液缓慢滴加至2-NHS-PTX缓冲液中,终浓度为0.5mg/mL,摇匀,室温反应过夜。LC-MS监测反应结果,反应结束后直接进行纯化制备。Weigh 20 mg of the peptide obtained in step 5 and add 13.6 mL DMSO to dissolve the peptide. Weigh 2-NHS-PTX (6 eq) obtained in step 7 and add 13.6 mL DMSO to fully dissolve it. Then slowly drop 12.8 mL 1×PBS into the solution. At this time, the solution has obvious heat release. Cool the solution at 4°C for 5-10 minutes. After cooling, slowly drop the peptide solution into the 2-NHS-PTX buffer to a final concentration of 0.5 mg/mL, shake well, and react at room temperature overnight. Monitor the reaction results by LC-MS, and purify and prepare directly after the reaction.
步骤9:目标多肽的纯化制备Step 9: Purification of target peptide
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为40-80%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 40-80% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure peptide.
步骤10:检测与表征方法Step 10: Detection and Characterization Methods
将步骤9的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物完成N端乙酰化,K15,K23,K27侧链接PTX缀合物以及形成分子内二硫键。检测图谱如图5、图6所示。The purified peptide from step 9 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and compound completion of N-terminal acetylation, K15, K23, K27 side-linked PTX conjugates, and formation of intramolecular disulfide bonds. The detection spectra are shown in Figures 5 and 6.
实施例6.化合物23的制备
Example 6. Preparation of Compound 23
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物23的直链前体肽链M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-R-G-R-G-K-C-Y-G-P-Q-C-L-C-RThe linear precursor peptide chain of compound 23 is M-C-M-P-C-F-T-T-D-H-Q-M-A-R-R-C-D-D-C-C-G-G-R-G-R-G-K-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下: 294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次。After the linear peptide synthesis, the resin was washed 5 times with DMF.
步骤2:N端乙酰化Step 2: N-terminal acetylation
配制10mL乙酰化试剂:500uL乙酸酐和500uL DIEA溶于9mL DMF中,将配制好的乙酰化试剂加入至步骤1所得树脂中,摇匀,震荡10min。反应后排干反应液,用DMF冲洗树脂6-8次,DCM冲洗树脂5次。树脂在真空中抽干。Prepare 10mL of acetylation reagent: 500uL of acetic anhydride and 500uL of DIEA dissolved in 9mL of DMF. Add the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
步骤3:直链前体肽链切割Step 3: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤2所得树脂中,在室温下振荡反应2h。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Add freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) to the resin obtained in step 2 and shake at room temperature for 2 hours. After the reaction is completed, filter the reaction solution, wash the resin with trifluoroacetic acid, combine it with the reaction solution, and precipitate with 4 times the volume of cold MTBE to obtain a crude product. Wash the crude product 3 times with MTBE and dry it in a vacuum.
步骤4:分子内二硫键形成Step 4: Intramolecular disulfide bond formation
将步骤3得到的粗品加入20%(v:v)DMSO充分溶解,然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的多肽溶液缓慢滴加至上述缓冲液中,终浓度为1mg/mL,室温震荡16h。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 3 was fully dissolved in 20% (v:v) DMSO, and then 2mM GSH was added to 50mM ammonium bicarbonate buffer (pH=8.0, containing 30% acetonitrile). The dissolved peptide solution was slowly added dropwise to the above buffer to a final concentration of 1mg/mL, and shaken at room temperature for 16h. The reaction results were monitored by LC-MS, and purification was performed directly after the reaction was completed.
步骤5:氧化后多肽的纯化制备Step 5: Purification and preparation of oxidized peptides
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为20-40%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>75%的馏分合并,冻干,获得氧化后多肽。After filtering through a 0.45um membrane, the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 20-40% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
步骤6:合成Compound 1
Step 6: Synthesize Compound 1
将紫杉醇(0.950g,1.8mmol)和4-硝基苯基碳酸酯(2.28g,7.49mmol)溶于5mL DMF,再加入DIEA(1.63mL,9.36mmol)室温搅拌1h。LC-MS监测反应结果,反应结束后,经C18反相色谱柱纯化,冻干后得到Compound 1。纯化方法:DMSO:乙腈1:1溶解样品,C18反相色谱柱纯化,梯度为40-90%(流动相为纯水和纯乙腈,不含TFA)。Paclitaxel (0.950 g, 1.8 mmol) and 4-nitrophenyl carbonate (2.28 g, 7.49 mmol) were dissolved in 5 mL DMF, and DIEA (1.63 mL, 9.36 mmol) was added and stirred at room temperature for 1 h. The reaction results were monitored by LC-MS. After the reaction, the product was purified by C18 reverse phase chromatography column and freeze-dried to obtain Compound 1. Purification method: The sample was dissolved in DMSO: acetonitrile in a ratio of 1:1, and purified by C18 reverse phase chromatography column with a gradient of 40-90% (the mobile phase was pure water and pure acetonitrile without TFA).
步骤7:多肽偶联PTX缀合物Step 7: Peptide coupling to PTX conjugate
称取步骤5所得多肽20mg,加入2mL DMF溶解多肽,再加入DIEA(6eq)。称取步骤6所得Compound 1(2eq),加入2mL DMF使其充分溶解。将Compound 1溶液缓慢滴加至多肽混合溶液中,终浓度为5mg/mL,N2保护,37。C水浴搅拌,过夜反应。LC-MS监测反应结果,反应结束后直接进行纯化制备。Weigh 20 mg of the peptide obtained in step 5, add 2 mL DMF to dissolve the peptide, and then add DIEA (6 eq). Weigh Compound 1 (2 eq) obtained in step 6, add 2 mL DMF to fully dissolve it. Slowly add the Compound 1 solution dropwise to the peptide mixed solution to a final concentration of 5 mg/mL, under N2 protection, stir in a 37. C water bath, and react overnight. LC-MS monitors the reaction results, and purification and preparation are carried out directly after the reaction is completed.
步骤8:目标多肽的纯化制备Step 8: Purification of target peptide
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为30-45%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column. During the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 30-45% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure peptide.
步骤9:检测与表征方法Step 9: Detection and Characterization Methods
将步骤9的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物完成N端乙酰化,K27侧链接PTX缀合物以及形成分子内二硫键。检测结果如图7、图8所示。The purified peptide from step 9 was subjected to analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to determine the purity and compound completion of N-terminal acetylation, K27 side-linked PTX conjugate, and formation of intramolecular disulfide bonds. The test results are shown in Figures 7 and 8.
实施例7.化合物32的制备
Example 7. Preparation of Compound 32
步骤1:直链前体肽链合成Step 1: Synthesis of linear precursor peptide chain
化合物32的直链前体肽链Linear precursor peptide chain of compound 32
M-C-M-P-C-F-T-T-D-H-Q-M-A-R-K(Mtt)-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-RM-C-M-P-C-F-T-T-D-H-Q-M-A-R-K(Mtt)-C-D-D-C-C-G-G-K-G-R-G-K-C-Y-G-P-Q-C-L-C-R
将294mg(0.2mmol)Rink Amide-AM Resin树脂在DMF中充分溶胀1h。之后将依照的直链前体序列从羧基端到氨基端的顺序合成。每一个偶联周期进行如下:294 mg (0.2 mmol) of Rink Amide-AM Resin was fully swollen in DMF for 1 h. Then the linear precursor sequence was synthesized from the carboxyl end to the amino end. Each coupling cycle was performed as follows:
20%哌啶/DMF(20%v/v,10mL)进行Fmoc-去保护两次,每次8min。Fmoc-deprotection was performed twice with 20% piperidine/DMF (20% v/v, 10 mL), each time for 8 min.
DMF冲洗树脂6-8次直到中性pH。The resin was washed 6-8 times with DMF until neutral pH.
用DMF溶解1.0mmol Fmoc-AA,1.0mmol 6-氯苯并三氮唑-1,1,3,3-四甲基脲六氟磷酸酯(HCTU)和2mmol 4-甲基吗啉(NMM),加入树脂室温反应1h。Dissolve 1.0 mmol Fmoc-AA, 1.0 mmol 6-chlorobenzotriazole-1,1,3,3-tetramethyluronium hexafluorophosphate (HCTU) and 2 mmol 4-methylmorpholine (NMM) in DMF, add the resin and react at room temperature for 1 h.
下一个氨基酸偶联之前用DMF冲洗树脂4-6次。The resin was washed 4-6 times with DMF before coupling the next amino acid.
直链多肽合成后用DMF冲洗树脂5次。After the linear peptide synthesis, the resin was washed 5 times with DMF.
步骤2:N端乙酰化 Step 2: N-terminal acetylation
配制10mL乙酰化试剂:500uL乙酸酐和500uL DIEA溶于9mL DMF中,将配制好的乙酰化试剂10mL加入至步骤1所得树脂中,摇匀,震荡10min。反应后排干反应液,用DMF冲洗树脂6-8次,DCM冲洗树脂5次。树脂在真空中抽干。Prepare 10mL of acetylation reagent: Dissolve 500uL of acetic anhydride and 500uL of DIEA in 9mL of DMF. Add 10mL of the prepared acetylation reagent to the resin obtained in step 1, shake well, and oscillate for 10 minutes. After the reaction, drain the reaction solution, rinse the resin with DMF 6-8 times, and rinse the resin with DCM 5 times. Drain the resin in a vacuum.
步骤3:AA15赖氨酸侧链偶联十四烷二酸Step 3: Coupling of AA15 lysine side chain to tetradecanedioic acid
脱去赖氨酸侧链Mtt保护基:用DCM将树脂溶胀1h后,在树脂中加入六氟异丙醇/二氯甲烷混合溶液(30%v/v,10mL),室温下振荡反应45分钟后抽除,重复操作一次,反应结束后用DMF洗涤树脂6次。赖氨酸侧链偶联十四烷二酸:称取1.0mmol十四烷二酸,1.0mmol 2-肟氰乙酸乙酯溶于8mL DM中,再加入160uL DIC预活化3min,然后将混合溶液加入至上一步得到的树脂中,震荡反应3h。反应后排干反应液,DMF洗涤4-5次。Removal of Mtt protecting group of lysine side chain: After swelling the resin with DCM for 1h, add hexafluoroisopropanol/dichloromethane mixed solution (30% v/v, 10mL) to the resin, shake and react at room temperature for 45 minutes, then remove, repeat the operation once, and wash the resin with DMF 6 times after the reaction. Coupling of lysine side chain with tetradecanedioic acid: weigh 1.0mmol tetradecanedioic acid, 1.0mmol ethyl 2-oximecyanoacetate and dissolve in 8mL DM, then add 160uL DIC for pre-activation for 3min, then add the mixed solution to the resin obtained in the previous step, shake and react for 3h. After the reaction, drain the reaction solution and wash with DMF 4-5 times.
步骤4:直链前体肽链切割Step 4: Cleavage of the linear precursor peptide chain
将新鲜配制的切割鸡尾酒(10mL)三氟乙酸:水:三异丙基硅烷:苯甲硫醚(90:2.5:2.5:5:,v:v:v:v)加入到步骤3所得树脂中,在室温下振荡反应2h。反应结束后将反应溶液过滤,并用三氟乙酸洗涤树脂,与反应溶液合并,用4倍体积冷MTBE沉淀得到粗品。用MTBE洗涤粗品3次,放入真空中抽干。Freshly prepared cutting cocktail (10 mL) trifluoroacetic acid: water: triisopropylsilane: thioanisole (90: 2.5: 2.5: 5:, v: v: v: v) was added to the resin obtained in step 3 and shaken for 2 h at room temperature. After the reaction, the reaction solution was filtered, and the resin was washed with trifluoroacetic acid, combined with the reaction solution, and precipitated with 4 volumes of cold MTBE to obtain a crude product. The crude product was washed with MTBE 3 times and dried in a vacuum.
步骤5:分子内二硫键形成Step 5: Intramolecular disulfide bond formation
将步骤4得到的粗品加入20%(v:v)DMSO充分溶解,然后在50mM碳酸氢铵缓冲液(pH=8.0,含30%乙腈)中加入2mM GSH,将溶解后的多肽溶液缓慢滴加至上述缓冲液中,终浓度为1mg/mL,室温震荡16h。LC-MS监测反应结果,反应结束后直接进行纯化制备。The crude product obtained in step 4 was fully dissolved in 20% (v:v) DMSO, and then 2mM GSH was added to 50mM ammonium bicarbonate buffer (pH=8.0, containing 30% acetonitrile). The dissolved peptide solution was slowly added dropwise to the above buffer to a final concentration of 1mg/mL, and shaken at room temperature for 16h. The reaction results were monitored by LC-MS, and purification was performed directly after the reaction was completed.
步骤6:氧化后多肽的纯化制备Step 6: Purification and preparation of oxidized peptides
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为25-50%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>75%的馏分合并,冻干,获得氧化后多肽。After filtering through a 0.45um membrane, the product was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column. During the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 25-50% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >75% were combined and freeze-dried to obtain the oxidized peptide.
步骤7:2-Succinyl PTX合成Step 7: 2-Succinyl PTX Synthesis
将紫杉醇(2g,2.3mmol)和丁二酸酐(1.875g,18.6mmol)溶于20mL无水吡啶,室温搅拌24h。反应完全后,减压除去溶剂,加入水搅拌1h,出现大量白色固体,抽滤,将白色固体50℃过夜干燥,得到丁二酰紫杉醇。Paclitaxel (2 g, 2.3 mmol) and succinic anhydride (1.875 g, 18.6 mmol) were dissolved in 20 mL of anhydrous pyridine and stirred at room temperature for 24 h. After the reaction was complete, the solvent was removed under reduced pressure, water was added and stirred for 1 h, and a large amount of white solid appeared. The white solid was filtered and dried at 50 ° C overnight to obtain succinyl paclitaxel.
步骤8:2-NHS-Succinyl PTX合成Step 8: Synthesis of 2-NHS-Succinyl PTX
取2-Succinyl PTX(2146.5mg,2.25mmol),N-羟基丁二酰亚胺(388.5mg,3.375mmol)混合,加入65mL DCM(CH2Cl2)使其充分溶解。再加入DCC(696.4mg,3.375mmol)到反应体系中,室温搅拌4.5h后减压除去溶剂得到白色固体。然后将白色固体用饱和食盐水和乙酸乙酯萃取3-5次,合并有机相。将有机相用无水硫酸钠干燥、过滤。减压除去溶剂,出现大量白色固体,得到粗品2-NHS-PTX。经C18反相色谱柱纯化,冻干后得到纯2-NHS-PTX。纯化方法:DMSO:乙腈1:1溶解样品,C18反相色谱柱纯化,梯度为50-90%(流动相为纯水和纯乙腈,不含TFA)Take 2-Succinyl PTX (2146.5 mg, 2.25 mmol) and N-hydroxysuccinimide (388.5 mg, 3.375 mmol) and mix them. Add 65 mL DCM (CH 2 Cl 2 ) to fully dissolve them. Then add DCC (696.4 mg, 3.375 mmol) to the reaction system, stir at room temperature for 4.5 hours, and then remove the solvent under reduced pressure to obtain a white solid. Then extract the white solid with saturated brine and ethyl acetate 3-5 times, and combine the organic phases. Dry the organic phase with anhydrous sodium sulfate and filter. Remove the solvent under reduced pressure, and a large amount of white solid will appear to obtain crude 2-NHS-PTX. Purify it with a C18 reverse phase column and freeze-dry it to obtain pure 2-NHS-PTX. Purification method: dissolve the sample in DMSO: acetonitrile 1:1, purify it with a C18 reverse phase column, and purify it with a gradient of 50-90% (the mobile phase is pure water and pure acetonitrile, without TFA)
步骤9:多肽偶联PTX缀合物Step 9: Peptide coupling to PTX conjugate
称取步骤6所得多肽20mg,加入13.6mL DMSO溶解多肽。称取步骤8所得2-NHS-PTX(6eq),加入13.6mL DMSO使其充分溶解,再缓慢滴加12.8mL 1×PBS至溶液中,此时溶液有明显放热。将溶液放置4℃冷却5-10min。冷却后,将多肽溶液缓慢滴加至2-NHS-PTX缓冲液中,终浓度为0.5mg/mL,摇匀,室温反应过夜。LC-MS监测反应结果,反应结束后直接进行纯化制备。Weigh 20 mg of the peptide obtained in step 6 and add 13.6 mL DMSO to dissolve the peptide. Weigh 2-NHS-PTX (6 eq) obtained in step 8 and add 13.6 mL DMSO to fully dissolve it. Then slowly drop 12.8 mL 1×PBS into the solution. At this time, the solution has obvious heat release. Cool the solution at 4°C for 5-10 minutes. After cooling, slowly drop the peptide solution into the 2-NHS-PTX buffer to a final concentration of 0.5 mg/mL, shake well, and react at room temperature overnight. Monitor the reaction results by LC-MS, and purify and prepare directly after the reaction.
步骤10:目标多肽的纯化制备Step 10: Purification of target peptide
经过0.45um膜过滤后用反相高效液相色谱系统进行分离,缓冲液为A(0.1%三氟乙酸,水溶液)和B(0.1%三氟乙酸,乙腈)。其中,色谱柱为BR C-18(赛分)反相色谱柱,纯化过程中色谱仪检测波长设定为230nm,流速为15mL/min,梯度为40-80%乙腈in 40min。收集产物相关馏分,HPLC鉴定纯度后将>95%的馏分合并,冻干,获得多肽纯品。After filtering through a 0.45um membrane, it was separated using a reversed-phase high-performance liquid chromatography system, with buffers A (0.1% trifluoroacetic acid, aqueous solution) and B (0.1% trifluoroacetic acid, acetonitrile). The chromatographic column was a BR C-18 (Saifen) reversed-phase column, and during the purification process, the chromatograph detection wavelength was set at 230nm, the flow rate was 15mL/min, and the gradient was 40-80% acetonitrile in 40min. The product-related fractions were collected, and after HPLC identification of the purity, the fractions >95% were combined and freeze-dried to obtain the pure peptide.
步骤11:检测与表征方法Step 11: Detection and Characterization Methods
将步骤9的多肽纯品通过分析性高效液相色谱和液相色谱/质谱联用确定纯度及化合物完成N端乙酰化,K15侧链接十四烷二酸,K23,K27侧链接PTX缀合物以及形成分子内二硫键。检测图谱如图9、图10所示。The purity of the peptide in step 9 was determined by analytical high performance liquid chromatography and liquid chromatography/mass spectrometry to confirm that the compound had completed N-terminal acetylation, K15 was linked to tetradecanedioic acid, K23, K27 were linked to PTX conjugates, and intramolecular disulfide bonds were formed. The detection spectra are shown in Figures 9 and 10.
本发明其他化合物可参照上述合成实施例合成。Other compounds of the present invention can be synthesized by referring to the above synthesis examples.
生物学评价Biological evaluation
测试例1 PDC分子对肿瘤细胞杀伤实验Test Example 1 PDC molecule killing tumor cells experiment
本发明通过测定PDC分子对两种脑胶质瘤细胞U87-MG和U373的杀伤实验IC50,评估其体外对脑胶质瘤细胞的杀伤效果。The invention evaluates the killing effect of PDC molecules on two types of brain glioma cells, U87-MG and U373, by measuring the killing experiment IC50.
材料:U373细胞(丰晖生物);U87-MG细胞(普诺赛);FBS(EXCELL);DMEM(SIGMA);MEM(SIGMA);P/S溶液100x(自制);胰酶(Gibco);EDTA(SIGMA);DPBS(自制);96孔黑色透底细胞板(Aligent);Celltiter-blue(Promega);DMSO(aladdin)。Materials: U373 cells (Fenghui Biotechnology); U87-MG cells (Punosai); FBS (EXCELL); DMEM (SIGMA); MEM (SIGMA); P/S solution 100x (homemade); trypsin (Gibco); EDTA (SIGMA); DPBS (homemade); 96-well black transparent bottom cell plate (Aligent); Celltiter-blue (Promega); DMSO (aladdin).
实验步骤:Experimental steps:
U87-MG细胞在培养基(MEM,10%FBS,1%P/S)中培养生长。细胞生长密度达到培养瓶的80-90%,先用DPBS润洗细胞,再用0.25%胰酶(含0.5mM EDTA)消化细胞;收集细胞悬液至离心管,1000rpm离心3min,移除上清培养基;加入6-8mL新鲜生长培养基重悬细胞,按照1:3~1:8的比列进行传代,放于37℃,5%CO2培养箱中培养。传代后每2-3天进行换液或传代。U373细胞在培养基(DMEM,10%FBS,1%P/S)中培养生长。细胞生长密度达到培养瓶的80-90%,先用DPBS润洗细胞,再用0.25%胰酶(含0.5mM EDTA)消化细胞;收集细胞悬液至离心管,1000rpm离心3min,移除上清培养基;加入6-8mL新鲜生长培养基重悬细胞,按照1:3~1:8的比列进行传代,放于37℃,5%CO2培养箱中培养。传代后每2-3天进行换液或传代。U87-MG cells were cultured and grown in culture medium (MEM, 10% FBS, 1% P/S). When the cell growth density reached 80-90% of the culture flask, the cells were first rinsed with DPBS, and then digested with 0.25% trypsin (containing 0.5mM EDTA); the cell suspension was collected into a centrifuge tube, centrifuged at 1000rpm for 3min, and the supernatant culture medium was removed; 6-8mL of fresh growth medium was added to resuspend the cells, and the cells were passaged at a ratio of 1:3 to 1:8, and cultured in a 37°C, 5% CO 2 incubator. After passage, the medium was changed or passaged every 2-3 days. U373 cells were cultured and grown in culture medium (DMEM, 10% FBS, 1% P/S). When the cell growth density reaches 80-90% of the culture flask, rinse the cells with DPBS first, then digest the cells with 0.25% trypsin (containing 0.5mM EDTA); collect the cell suspension into a centrifuge tube, centrifuge at 1000rpm for 3min, remove the supernatant medium; add 6-8mL of fresh growth medium to resuspend the cells, subculture at a ratio of 1:3 to 1:8, and culture in a 37℃, 5% CO2 incubator. After subculture, change the medium or subculture every 2-3 days.
在实验前16-24h,将U373细胞和U87-MG细胞传代扩增至所需细胞数量,将细胞消化离心收集细胞沉淀,使用适量完全培养基重悬细胞,检测细胞活力并计数,再以完全培养基调整细胞浓度为2×104cells/mL。以100μL/孔接种96孔板中间孔,边缘孔用相同体积100μL/孔DPBS填充,放入37℃,5%CO2培养箱中孵育过夜。16-24h before the experiment, U373 cells and U87-MG cells were subcultured and expanded to the required cell number, the cells were digested and centrifuged to collect the cell pellet, the cells were resuspended in an appropriate amount of complete medium, the cell viability was detected and counted, and the cell concentration was adjusted to 2×104 cells/mL with complete medium. 100μL/well was inoculated into the middle well of the 96-well plate, and the edge wells were filled with the same volume of 100μL/well DPBS, and incubated in a 37°C, 5% CO 2 incubator overnight.
PDC药物使用灭菌水或DMSO溶解至1mM,实验分别用U373细胞和U87-MG细胞的生长培养基稀释PDC药物,浓度为1μM(2×浓度),并依次用对应细胞的生长培养基进行5倍梯度稀释,共9个浓度(500nM-0.00128nM)。PDC drug was dissolved to 1 mM using sterile water or DMSO. The PDC drug was diluted with the growth medium of U373 cells and U87-MG cells to a concentration of 1 μM (2× concentration), and then diluted 5-fold using the growth medium of the corresponding cells, for a total of 9 concentrations (500 nM-0.00128 nM).
取出接种过夜的细胞,每孔吸弃50μL培养基,加入50μL/孔PDC药物工作液,继续放入37℃,5%CO2培养箱中孵育48h后,每孔加入20μL平衡至室温的Celltiter-blue染液,37℃,5%CO2培养箱中孵育1h后检测560EX/590EM。Remove the cells inoculated overnight, discard 50 μL of culture medium from each well, add 50 μL/well PDC drug working solution, continue to incubate in a 37°C, 5% CO2 incubator for 48 hours, then add 20 μL of Celltiter-blue dye balanced to room temperature to each well, incubate in a 37°C, 5% CO2 incubator for 1 hour, and then detect 560EX/590EM.
本发明部分PDC分子对肿瘤细胞杀伤实验IC50结果如表1所示,对两种脑胶质瘤细胞U87-MG和U373的杀伤曲线如图11、图12所示。The IC50 results of the tumor cell killing experiment of some PDC molecules of the present invention are shown in Table 1, and the killing curves of two types of brain glioma cells, U87-MG and U373, are shown in Figures 11 and 12.
ANG-1005是一种脑穿透肽药物偶联物。ANG-1005是一种紫杉烷衍生物,由三个紫杉醇分子与Angiopep-2共价连接组成(结构如下所示),旨在通过低密度脂蛋白受体相关蛋白(LRP1)运输系统穿过血脑和血脑脊髓屏障,并穿透恶性细胞。
ANG-1005 is a brain-penetrating peptide-drug conjugate. ANG-1005 is a taxane derivative consisting of three paclitaxel molecules covalently linked to Angiopep-2 (structure shown below), designed to cross the blood-brain and blood-brain-spinal cord barriers via the low-density lipoprotein receptor-related protein (LRP1) transport system and penetrate malignant cells.
表1本发明部分PDC分子对肿瘤细胞U87-MG和U373杀伤实验IC50结果
Table 1 IC 50 results of the killing experiment of some PDC molecules of the present invention on tumor cells U87-MG and U373
实验结果显示,本发明PDC分子对肿瘤细胞U87-MG和U373具有较好的杀伤效果。The experimental results show that the PDC molecule of the present invention has a good killing effect on tumor cells U87-MG and U373.
测试例2荧光成像检测多肽在U87-MG和U373细胞上内吞效果Test Example 2 Fluorescence imaging to detect the endocytosis effect of peptides in U87-MG and U373 cells
材料:公司自研设计并合成的多肽;96孔黑色透底细胞板(Aligent);固定液(碧云天);DAPI(碧云天);DPBS(自制)。Materials: peptides designed and synthesized by the company; 96-well black transparent cell plates (Aligent); fixative (Biyuntian); DAPI (Biyuntian); DPBS (homemade).
4405,24,25,26,27为Cy5标记多肽,其中4405为Cy5标记Angiopep-2,24、25、26、27分别对应的PDC分子为17、18、20、21。4405, 24, 25, 26, and 27 are Cy5-labeled polypeptides, of which 4405 is Cy5-labeled Angiopep-2, and the PDC molecules corresponding to 24, 25, 26, and 27 are 17, 18, 20, and 21, respectively.
实验步骤:Experimental steps:
将U87-MG或U373细胞与Cy5标记的多肽一起孵育,随后使用共聚焦显微镜进行监测带有FITC-多肽的位置。U87-MG or U373 cells were incubated with Cy5-labeled peptides, and the location of FITC-peptides was subsequently monitored using confocal microscopy.
在实验前16-24h,将U87-MG或U373细胞传代扩增至所需细胞数量,将细胞消化离心收集细胞沉淀,使用适量完全培养基重悬细胞,检测细胞活力并计数,再以完全培养基调整细胞浓度为4×104cells/mL。以100μL/孔接种96孔板中间孔,边缘孔用相同体积100μL/孔DPBS填充,放入37℃,5%CO2培养箱中孵育过夜。16-24h before the experiment, U87-MG or U373 cells were subcultured and expanded to the required cell number, the cells were digested and centrifuged to collect the cell pellet, the cells were resuspended in an appropriate amount of complete medium, the cell viability was detected and counted, and the cell concentration was adjusted to 4×104 cells/mL with complete medium. 100μL/well was inoculated into the middle well of the 96-well plate, and the edge wells were filled with the same volume of 100μL/well DPBS, and incubated in a 37°C, 5% CO2 incubator overnight.
多肽使用DMSO溶解至1mM,实验时使用各细胞生长培养基稀释多肽,浓度为10μM,分别用各细胞生长培养基进行3倍梯度稀释,共3个浓度(10μM-1.11μM)。The peptide was dissolved in DMSO to 1 mM. During the experiment, the peptide was diluted with each cell growth medium to a concentration of 10 μM. The peptide was diluted 3-fold with each cell growth medium, for a total of 3 concentrations (10 μM-1.11 μM).
取出接种过夜的细胞板,吸弃孔中旧培养基,替换成稀释好的多肽100μL/孔,继续放入37℃,5%CO2培养箱中孵育4h/24h后,再经过固定液固定、DAPI进行核染后使用共聚焦显微镜镜下荧光成像观察。Take out the cell plate inoculated overnight, discard the old culture medium in the wells, replace it with 100 μL/well of diluted polypeptide, and continue to incubate in a 37°C, 5% CO2 incubator for 4h/24h, then fix it with fixative, perform nuclear staining with DAPI, and observe fluorescence imaging under a confocal microscope.
共聚焦成像结果如图13~20所示,在U87-MG和U373细胞上多肽的内吞效果27>26>25>24>4405,其对应的PDC分子内吞效果为21>20>18>17>ANG-1005。The confocal imaging results are shown in Figures 13 to 20. The endocytosis effect of the polypeptides in U87-MG and U373 cells is 27>26>25>24>4405, and the corresponding endocytosis effect of PDC molecules is 21>20>18>17>ANG-1005.
测试例3人血浆稳定性Test Example 3 Human Plasma Stability
实验材料:甲醇(购自Sigma);甲酸(购自阿拉丁);DMSO(二甲基亚砜)(购自阿拉丁)。Experimental materials: methanol (purchased from Sigma); formic acid (purchased from Aladdin); DMSO (dimethyl sulfoxide) (purchased from Aladdin).
实验步骤:待测样本配置:取待测多肽用DMSO或其他有机溶剂溶解至终浓度的100倍1mM,置于-20℃备用。血浆融化:从-80℃冰箱中取出人血浆(样本数*2.1)mL,放在37℃水浴迅速融化。配置MIX(混合物):取693μL血浆加入到1.5mL EP管中,每个时间点3个平行样,配置3管MIX。再每管加7μL待测样本,使其终浓度为可检测浓度或体内用药浓度10μM。在旋涡振荡器上震荡30s,按时间梯度各分装100μL后孵育,全程冰上操作。孵育:在37℃水浴锅中按照0min、15min、30min、60min、90min、120min六个时间点孵育。终止反应:孵育后,加入4倍体积沉淀剂。混匀:在旋涡振荡器上震荡30s。离心:4℃,15000r/min离心10min。取上清,转移至进样小管中,送至LC-MS/MS进行分析。Experimental steps: Preparation of test samples: Dissolve the peptide to be tested in DMSO or other organic solvents to 100 times the final concentration of 1mM, and place it at -20℃ for use. Plasma thawing: Take out human plasma (sample number * 2.1) mL from the -80℃ refrigerator and quickly thaw it in a 37℃ water bath. Prepare MIX (mixture): Take 693μL of plasma and add it to a 1.5mL EP tube, 3 parallel samples at each time point, and prepare 3 tubes of MIX. Then add 7μL of the sample to be tested to each tube to make its final concentration a detectable concentration or in vivo drug concentration of 10μM. Oscillate on a vortex oscillator for 30s, divide 100μL into each according to the time gradient, and incubate, all on ice. Incubation: Incubate in a 37℃ water bath at six time points: 0min, 15min, 30min, 60min, 90min, and 120min. Stop the reaction: After incubation, add 4 times the volume of precipitant. Mixing: Oscillate on a vortex oscillator for 30s. Centrifugation: 4℃, 15000r/min for 10min. Take the supernatant, transfer to a small injection tube, and send to LC-MS/MS for analysis.
实验结果:Experimental results:
以纵坐标为原药剩余率(%),横坐标为时间的点线图。可以看到一个随着时间变化,样品在体外血浆中降解的变化趋势,得到样品稳定性的结果。
The dot-line graph with the original drug remaining rate (%) as the ordinate and time as the abscissa shows a trend of sample degradation in in vitro plasma over time, and the sample stability result is obtained.
计算药物在血浆中的半衰期T1/2。Calculate the half-life T 1/2 of the drug in plasma.
根据一级动力学公式计算,得到消除速率常数(Ke),进一步根据公式,求得该化合物在血浆中的T1/2(min)。The elimination rate constant (Ke) was calculated based on the first-order kinetic formula, and the T 1/2 (min) of the compound in plasma was further calculated based on the formula.
T1/2=-0.693/KeT 1/2 = -0.693/Ke
本发明部分PDC分子血浆稳定性实验结果如表2、图21所示:The experimental results of plasma stability of some PDC molecules of the present invention are shown in Table 2 and Figure 21:
表2本发明部分PDC分子人血浆稳定性实验结果
Table 2 The experimental results of the stability of some PDC molecules in human plasma of the present invention
实验结果显示,本发明的PDC分子具有良好的血浆稳定性,有助于临床应用。The experimental results show that the PDC molecule of the present invention has good plasma stability and is conducive to clinical application.
测试例4小鼠血浆稳定性Test Example 4 Mouse plasma stability
1.实验材料:甲醇(购自Sigma);甲酸(购自阿拉丁);DMSO(二甲基亚砜)(购自阿拉丁);乙腈(购自Sigma);二氯甲烷(购自Sigma)。1. Experimental materials: methanol (purchased from Sigma); formic acid (purchased from Aladdin); DMSO (dimethyl sulfoxide) (purchased from Aladdin); acetonitrile (purchased from Sigma); dichloromethane (purchased from Sigma).
小鼠血浆(肝素钠)为斯莱克自取。Mouse plasma (heparin sodium) was obtained by Slack.
2.测试化合物的配制2. Preparation of test compounds
使用DMSO将样本稀释至0.1mM。Samples were diluted to 0.1 mM using DMSO.
3.前处理溶液及配制方法
3. Pretreatment solution and preparation method
4.实验步骤:4. Experimental steps:
(1)配置混匀液:取(50μL×(6个时间点)+1)350μL血浆(肝素钠)加入到1.5ml EP管中,每个时间点至少3个平行样,配置1管混匀液,冰浴5min。每管加3.5μL待测样本,使其终浓度为1μM。在旋涡振荡器上震荡混匀,按时间梯度的重复分装50μL至EP管后孵育。(1) Prepare the mixed solution: Take (50μL×(6 time points)+1) 350μL plasma (heparin sodium) and add it to a 1.5ml EP tube. Prepare at least 3 parallel samples for each time point, prepare 1 tube of mixed solution, and place on ice for 5 min. Add 3.5μL of the sample to be tested to each tube to make the final concentration 1μM. Vortex and mix well, and dispense 50μL into EP tubes according to the time gradient and incubate.
(2)孵育:在37℃水浴锅中按照0min、15min、30min、60min、120min、240min六个时间点孵育。(2) Incubation: Incubate in a 37°C water bath at six time points: 0 min, 15 min, 30 min, 60 min, 120 min, and 240 min.
(3)终止反应:孵育后,根据生物分析要求的前处理方式进行不同的前处理。(3) Termination reaction: After incubation, different pretreatment methods are performed according to the pretreatment methods required for biological analysis.
(4)混匀:在旋涡振荡器上震荡混匀。(4) Mixing: Mix by vortexing on a vortex oscillator.
(5)离心:低温高速离心机中4℃,13000rpm离心10min。取上清70μL,转至进样瓶中,用LC-MS/MS进行分析。(5) Centrifugation: Centrifuge at 4°C, 13,000 rpm for 10 min in a low-temperature high-speed centrifuge. Take 70 μL of the supernatant, transfer it to a sample injection bottle, and analyze it by LC-MS/MS.
(6)数据分析(6) Data analysis
结果评定:用LC-MS/MS方法检测不同时间点下的多肽的峰面积,结果使用原药剩余率百分比表示。结果如表3、表4、图22所示,表3展示prism软件拟合结果。利用prism软件得出化合物21的半衰期为1021min,化合物32的半衰期为304.5min。Result evaluation: The peak area of the peptide at different time points was detected by LC-MS/MS method, and the results were expressed as the percentage of the original drug remaining rate. The results are shown in Table 3, Table 4, and Figure 22. Table 3 shows the fitting results of the prism software. The half-life of compound 21 and the half-life of compound 32 were 1021 min and 304.5 min, respectively, using the prism software.
表3不同时间点多肽剩余率百分比
Table 3 Percentage of peptide remaining rate at different time points
表4 prism软件拟合结果
Table 4 Prism software fitting results
测试例5多肽分子穿透血脑屏障体外评估Test Example 5 In vitro evaluation of peptide molecules penetrating the blood-brain barrier
实验材料:甲醇(购自Sigma);甲酸(购自阿拉丁);DMSO(二甲基亚砜)(购自阿拉丁);平衡盐溶液(HBSS)自制。Experimental materials: methanol (purchased from Sigma); formic acid (purchased from Aladdin); DMSO (dimethyl sulfoxide) (purchased from Aladdin); balanced salt solution (HBSS) was homemade.
4405,25,26,27为Cy5标记多肽,其中4405为Cy5标记Angiopep-2,25、26、27分别对应的PDC分子为18、20、21。4405, 25, 26, and 27 are Cy5-labeled polypeptides, of which 4405 is Cy5-labeled Angiopep-2, and the PDC molecules corresponding to 25, 26, and 27 are 18, 20, and 21, respectively.
实验步骤:Experimental steps:
配置以下溶液:沉淀剂(1%甲酸甲醇溶液),平衡盐溶液(HBSS):137mM NaCl,5.4mM KCl,0.44mM KH2PO4,0.5mM NaH2PO4,4.2mM Na2HPO4,4.2mM NaHCO3,5.5mM D-葡萄糖.Prepare the following solutions: precipitant (1% formic acid in methanol), balanced salt solution (HBSS): 137 mM NaCl, 5.4 mM KCl, 0.44 mM KH 2 PO 4 , 0.5 mM NaH 2 PO 4 , 4.2 mM Na 2 HPO 4 , 4.2 mM NaHCO 3 , 5.5 mM D-glucose.
将3-4周龄雄性SD大鼠处死,置于超净台,沿中缝剪开脑壳,挖出全脑置于缓冲液中。去除小脑、间脑,取微血管,剔除大脑实质,保留大脑皮层;将大脑皮层平铺于灭菌纸上,向下翻滚一周,重复以上动作,直至血管脑粘膜粘干净;消化分离,细胞纯化,取微血管细胞层,移入T75培养瓶中培养。第二天吸弃原有培养液,加入常温无菌HBSS润洗1次,换成含有3μg/mL嘌呤霉素的EBM-2培养液,此后每两天换一次液(后续换液不加嘌呤霉素)。细胞长到80%左右后将上述细胞转入铺鼠尾胶的Transwell中进行培养,继续培养7-8天,每两天换一次液并进行电阻值检测。Male SD rats aged 3-4 weeks were killed and placed on a clean bench. The skull was cut open along the midline, and the whole brain was dug out and placed in a buffer solution. The cerebellum and diencephalon were removed, the microvessels were taken, the brain substance was removed, and the cerebral cortex was retained; the cerebral cortex was spread flat on sterile paper, rolled down for a week, and the above actions were repeated until the vascular brain mucosa was clean; digestion and separation, cell purification, microvascular cell layer was taken, and transferred to a T75 culture bottle for culture. The next day, the original culture medium was aspirated and discarded, and room temperature sterile HBSS was added for rinsing once, and replaced with EBM-2 culture medium containing 3μg/mL puromycin, and the medium was changed every two days thereafter (no puromycin was added for subsequent changes). After the cells grew to about 80%, the above cells were transferred to a Transwell covered with rat tail glue for culture, and continued to be cultured for 7-8 days, and the medium was changed every two days and the resistance value was tested.
用HBSS将各多肽样品稀释到终浓度为10μM的给药液,在涡旋振荡器上震荡30s。将培养到符合实验要求的原代大鼠内皮细胞模型,弃去小室两侧旧的培养基,用37℃预热的转运缓冲液各清洗一遍。弃去缓冲液,上层小室(顶端,Apical,AP)每孔加入100μL给药端溶液,下层小室(基底端;Basolateral,BL)每孔加入600μL HBSS。37℃条件下孵育1h。孵育结束后,在小室上端(AP)吸取10μL给药端样品,加入90μL HBSS到酶标板中;在小室下端(BL)取100μL样品到酶标板中;T0时刻样品吸取10μL样品,加入90μLHBSS到酶标板中,震荡混匀。Dilute each peptide sample with HBSS to a final concentration of 10 μM dosing solution, and oscillate on a vortex oscillator for 30 seconds. For the primary rat endothelial cell model that has been cultured to meet the experimental requirements, discard the old culture medium on both sides of the chamber, and wash each well with transport buffer preheated at 37°C. Discard the buffer, add 100 μL of dosing end solution to each well of the upper chamber (apical, AP), and add 600 μL HBSS to each well of the lower chamber (basolateral, BL). Incubate at 37°C for 1 hour. After the incubation, aspirate 10 μL of dosing end sample at the upper end of the chamber (AP), add 90 μL HBSS to the ELISA plate; take 100 μL of sample at the lower end of the chamber (BL) to the ELISA plate; aspirate 10 μL of sample at T0, add 90 μL HBSS to the ELISA plate, and oscillate to mix.
所有多肽样品都为CY5标记,用酶标仪检测OD值(激发波长:OD640nm,发射波长:OD681nm)。All peptide samples were labeled with CY5, and the OD values were detected using a microplate reader (excitation wavelength: OD640 nm, emission wavelength: OD681 nm).
药物透过大鼠原代脑内皮细胞的速率以表观渗透系数(Papp,单位:×10-6cm/s)来表示。
The rate at which drugs permeate through rat primary brain endothelial cells is expressed by the apparent permeability coefficient (Papp, unit: ×10-6cm/s).
VR为接收端溶液的体积(0.6mL),Area为Transwell-24孔板小室膜面积(0.33cm2),Time为孵育时间(单位:s),CR为样品接收端的药物浓度,C0为样品最初0时刻时的药物浓度。VR is the volume of the receiving solution (0.6 mL), Area is the membrane area of the Transwell-24 well plate chamber (0.33 cm 2 ), Time is the incubation time (unit: s), CR is the drug concentration at the sample receiving end, and C0 is the drug concentration at the initial time 0 of the sample.
实验结果如图23所示,实验结果显示:体外血脑屏障模型中,多肽穿透力27>26>25>4405,其对应的PDC分子穿透力为21>20>18>ANG-1005。The experimental results are shown in FIG23 . The experimental results show that in the in vitro blood-brain barrier model, the peptide penetration is 27>26>25>4405, and the corresponding PDC molecule penetration is 21>20>18>ANG-1005.
测试例6多肽分子穿透血脑屏障小鼠体内评估Test Example 6 Evaluation of Peptide Molecules Penetrating the Blood-Brain Barrier in Mice
实验材料:ICR小鼠6-8周雄性(购自湖南斯莱克景达实验动物有限公司),DMSO(二甲基亚砜)(购自阿拉丁)。Experimental materials: 6-8 week old male ICR mice (purchased from Hunan Slake Jingda Experimental Animal Co., Ltd.), DMSO (dimethyl sulfoxide) (purchased from Aladdin).
24,25,26,27为Cy5标记多肽,24、25、26、27分别对应的PDC分子为17、18、20、21。24, 25, 26, and 27 are Cy5-labeled polypeptides, and the PDC molecules corresponding to 24, 25, 26, and 27 are 17, 18, 20, and 21, respectively.
实验步骤:Experimental steps:
待测样准备和样本处理:用cy5标记待测多肽,用DMSO配置标曲工作液,分别绘制在血浆和脑匀浆中荧光值和对应标记多肽浓度的标曲,根据标曲检测下线的1/2000比例配制注射剂量。尾静脉给药:在动物保持清醒状态下,用27#针的1mL注射器,于小鼠尾静脉给药200uL。采血并离心含样血清:在异氟烷麻醉下,在固定时间点剪开心耳,用加样器采血,采血量不低于0.4ml,将收集到的含样血液4℃、4000g下离心5min, 取上清液。取脑并研磨脑组织匀浆:用20mLPBS从心脏灌注小鼠全身后断头取脑,取出的脑组织取半脑,称重,以1:2(0.1g脑组织加100uL PBS)匀浆,匀浆速度为60hz,60s,2mm磁珠两个/每管,匀浆后取中间匀浆,剩余脑组织放在培养皿中,保存于-80℃冰箱。样本检测:脑组织取出后匀浆前使用IVIS系统成像扫描,将血清和脑匀浆液各取100μL,加入96孔板读荧光值,待测样品与标曲同时进行在酶标仪上检测(640/670Cy5)。Preparation of test samples and sample processing: label the peptide to be tested with cy5, prepare the marker working solution with DMSO, plot the fluorescence value and the marker curve corresponding to the concentration of the labeled peptide in plasma and brain homogenate, respectively, and prepare the injection dose according to the 1/2000 ratio of the marker curve detection line. Tail vein administration: while the animal is awake, use a 1mL syringe with a 27# needle to administer 200uL into the tail vein of the mouse. Blood collection and centrifugation of sampled serum: under isoflurane anesthesia, cut open the heart and ears at fixed time points, and collect blood with a pipette. The blood collection volume is not less than 0.4ml. The collected sampled blood is centrifuged at 4°C and 4000g for 5min. Take the supernatant. Take the brain and grind the brain tissue homogenate: perfuse the whole body of the mouse with 20mL PBS from the heart, then cut off the head and take the brain. Take half of the brain tissue, weigh it, and homogenize it at 1:2 (0.1g brain tissue plus 100uL PBS). The homogenization speed is 60hz, 60s, and two 2mm magnetic beads per tube. After homogenization, take the middle homogenate, and put the remaining brain tissue in a culture dish and store it in a -80℃ refrigerator. Sample detection: After the brain tissue is taken out and before homogenization, use the IVIS system imaging scan, take 100μL of serum and brain homogenate, add it to a 96-well plate to read the fluorescence value, and the sample to be tested and the standard curve are detected on the enzyme reader at the same time (640/670Cy5).
根据标曲得到不同时间点的不同基质中的浓度,使用脑组织和血浆中药物浓度作为纵坐标,时间作为横坐标绘制药物-时间曲线,分别计算脑组织和血浆药-时曲线的曲线下面积(AUC),根据AUC计算AUC血脑比。The concentrations in different matrices at different time points were obtained according to the standard curves. The drug-time curves were plotted using the drug concentrations in brain tissue and plasma as the ordinate and time as the abscissa. The areas under the curves (AUCs) of the brain tissue and plasma drug-time curves were calculated respectively, and the AUC blood-brain ratio was calculated based on the AUCs.
AUC血脑比=AUCBrain/AUCPlasma,其中AUCBrain指的是脑组织药-时曲线的曲线下面积,AUCplasma指的是血浆药-时曲线的曲线下面积。AUC blood-brain ratio = AUCBrain/AUCPlasma, where AUCBrain refers to the area under the curve of the brain tissue drug-time curve, and AUCplasma refers to the area under the curve of the plasma drug-time curve.
实验结果如表5、图24~28所示,本发明PDC分子能够在小鼠体内穿透血脑屏障到达脑组织,且具有良好的穿透效果。The experimental results are shown in Table 5 and Figures 24 to 28. The PDC molecules of the present invention can penetrate the blood-brain barrier in mice and reach the brain tissue, and have a good penetration effect.
表5 AUC血脑比计算结果
Table 5 AUC blood-brain ratio calculation results
测试例7 CHILogD检测Test Example 7 CHILogD Detection
实验材料:PDC药物(自制合成多肽联药):ANG-1005、21、32。Experimental materials: PDC drugs (self-made synthetic peptide drug): ANG-1005, 21, 32.
实验相关试剂:Na2HPO4(磷酸氢二钠)(购自阿拉丁);NaH2PO4(磷酸二氢钠)(购自阿拉丁);ACN(乙腈)(购自Sigma-);超纯水(超纯水机自制)。Experimental related reagents: Na 2 HPO4 (disodium hydrogen phosphate) (purchased from Aladdin); NaH2PO4 (sodium dihydrogen phosphate) (purchased from Aladdin); ACN (acetonitrile) (purchased from Sigma- ); ultrapure water (made by ultrapure water machine).
实验仪器:安捷伦高效液相色谱仪1260。Experimental instrument: Agilent 1260 high performance liquid chromatograph.
实验方法:Experimental methods:
使用乙腈/水溶液溶解多肽后,通过安捷伦高效液相色谱仪1260进样分析,缓冲液为A(90%H2O(20mM Na2HPO4+20mM NaH2PO4)/10%ACN)和B(70%ACN+30%H2O)。其中色谱柱为月旭C18反相色谱柱(4.6*150mm,5um,),色谱仪检测波长设定为214nm,流速为1mL/min,梯度为10%B-95%B in26 min。After the peptide was dissolved in acetonitrile/water solution, it was analyzed by Agilent HPLC 1260, and the buffer was A (90% H2O (20mM Na 2 HPO4 + 20mM NaH2PO4) / 10% ACN) and B (70% ACN + 30% H2O). The chromatographic column was Yuexu C18 reverse phase column (4.6*150mm, 5um, ), the chromatograph detection wavelength was set at 214 nm, the flow rate was 1 mL/min, and the gradient was 10% B-95% B in 26 min.
实验结果:Experimental results:
HPLC进样分析后,记录样品的保留时间(tR),代入公式计算测试化合物的CHI7.4值,再计算CHILogD值。计算结果如表6所示。After HPLC injection analysis, the retention time (tR) of the sample was recorded and substituted into the formula to calculate the CHI7.4 value of the test compound, and then the CHILogD value was calculated. The calculation results are shown in Table 6.
CHI7.4=14.817tR-63.317 r=0.9999CHI7.4=14.817tR-63.317 r=0.9999
CHILogD=0.054CHI-1.467CHILogD=0.054CHI-1.467
CHILogD值越高,表示化合物的亲脂性越强。在中性pH值下的亲脂性差异揭示了中性pH值下分子的总体电荷是带正电荷还是负电荷。Higher CHILogD values indicate a more lipophilic compound. The difference in lipophilicity at neutral pH reveals whether the overall charge of the molecule at neutral pH is positive or negative.
表6化合物CHILogD值
Table 6 CHILogD values of compounds
测试例8多肽分子小鼠药代动力学评估Test Example 8 Peptide molecule pharmacokinetic evaluation in mice
实验材料:PDC药物(自制合成多肽联药)。Experimental materials: PDC drug (self-made synthetic peptide drug).
相关试剂及耗材:1mL胰岛素针、1.5mL EDTA抗凝管、0.3mLEP管、EDTA、蛋白酶抑制剂。Related reagents and consumables: 1mL insulin needle, 1.5mL EDTA anticoagulant tube, 0.3mL EP tube, EDTA, and protease inhibitors.
实验动物:ICR小鼠、18只,雄性、6-7周,购自湖南斯莱克景达实验动物有限公司。Experimental animals: ICR mice, 18, male, 6-7 weeks old, purchased from Hunan Slake Jingda Experimental Animal Co., Ltd.
实验方法:Experimental methods:
在标准环境下饲养6-7周龄ICR雌鼠,适应性饲养一周后,将体重相近的8只小鼠随机分为2组,每组4只。将化合物分别配制为1.25mg/mL,尾静脉注射体积为10mL/kg,给药结束后,化合物于40s、5min、15min、30min、60min、120min、240min、360min进行小鼠颌下静脉采血约200uL,将血液样品置于EDTA抗凝管中,离心后分离收集血浆,置于-80℃冰箱中待测。ICR female mice aged 6-7 weeks were raised under standard conditions. After one week of adaptive feeding, 8 mice of similar weight were randomly divided into 2 groups, 4 mice in each group. The compounds were prepared at 1.25 mg/mL, and the tail vein injection volume was 10 mL/kg. After the administration, about 200uL of blood was collected from the submandibular vein of the mice at 40s, 5min, 15min, 30min, 60min, 120min, 240min, and 360min. The blood samples were placed in EDTA anticoagulant tubes, centrifuged, separated, and collected plasma, which was placed in a -80°C refrigerator for testing.
取血浆样品,解冻,涡旋混匀,取50uL于1.5mLEP管,加入50uL含1%FA的50%甲醇PBS,涡旋3min,加入200uL 0.1%FA75%乙腈,涡旋3min,离心10min(13000rpm),取上清于LC-MS进样分析。Take plasma samples, thaw, vortex mix, take 50uL into a 1.5mL EP tube, add 50uL of 50% methanol PBS containing 1% FA, vortex for 3min, add 200uL 0.1% FA 75% acetonitrile, vortex for 3min, centrifuge for 10min (13000rpm), and take the supernatant for LC-MS injection analysis.
实验结果Experimental Results
小鼠静脉给药化合物后,测定各时间点的结果制作血药浓度-时间曲线图。After intravenous administration of the compound to mice, the results at each time point were measured to prepare a blood drug concentration-time curve.
用PKslover2.0药代动力学软件对小鼠静脉给药后,不同PDC药物的代谢动力学参数进行计算,结果见表(t1/2:消除半衰期;C0:初始浓度;CL:清除率;AUC:药时曲线下面积;Vss:稳态浓度时的分布容积;Vz:分布容积)。The metabolic kinetic parameters of different PDC drugs were calculated after intravenous administration to mice using PKslover2.0 pharmacokinetic software. The results are shown in the table (t1/2: elimination half-life; C0: initial concentration; CL: clearance rate; AUC: area under the drug-time curve; Vss: distribution volume at steady-state concentration; Vz: distribution volume).
本发明的PDC分子具有良好的药代动力学性质。The PDC molecules of the present invention have good pharmacokinetic properties.
以上已对本发明创造的较佳实施例进行了具体说明,但本发明创造并不限于所述的实施例,熟悉领域的技术人员在不违背本发明创造精神的前提下还可做出种种的等同的变形或替换,这些等同的变形或替换均包含在本申请权利要求所限定的范围内。 The preferred embodiments of the present invention have been specifically described above, but the present invention is not limited to the described embodiments. Technicians familiar with the field can make various equivalent modifications or substitutions without violating the spirit of the present invention. These equivalent modifications or substitutions are all included in the scope defined by the claims of this application.
Claims (10)
Peptide-(Linker-Drug)m
(I)A polypeptide conjugate of a chlorotoxin analogue as shown in formula (I),
Peptide-(Linker-Drug) m
(I)
-GALGLPG-,其中,p为1、2、3、4或5。The polypeptide conjugate according to claim 1, characterized in that the linker is independently selected from the following structures or any combination of the following structures:
-GALGLPG-, where p is 1, 2, 3, 4 or 5.
The polypeptide conjugate according to claim 1, characterized in that it has a structure shown in the following formula (II), formula (III), formula (IV) or formula (V):
The polypeptide conjugate according to claim 1, characterized in that the structure of the polypeptide conjugate is selected from one of the following structures:
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