WO2024206245A1 - Methods and compositions for producing ovarian support cell co-culture - Google Patents
Methods and compositions for producing ovarian support cell co-culture Download PDFInfo
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- C12N2501/00—Active agents used in cell culture processes, e.g. differentation
- C12N2501/30—Hormones
- C12N2501/31—Pituitary sex hormones, e.g. follicle-stimulating hormone [FSH], luteinising hormone [LH]; Chorionic gonadotropins
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- C12N2506/00—Differentiation of animal cells from one lineage to another; Differentiation of pluripotent cells
- C12N2506/45—Differentiation of animal cells from one lineage to another; Differentiation of pluripotent cells from artificially induced pluripotent stem cells
Definitions
- This disclosure relates to the fields of in vitro oocyte maturation and assisted reproductive technology (ART).
- IVM in vitro maturation
- the disclosure features an ex vivo composition that includes one or more ovarian support cells (OSCs) and one or more diluents or excipients.
- OSCs ovarian support cells
- the composition promotes the maturation of one or more oocytes.
- the one or more OSCs include one or more granulosa cells. In some embodiments, the one or more OSCs express FOXL2, AMHR2, CD82, or any combination thereof. In some embodiments, the one or more OSCs express one or more genes selected from GJA1 , MDK, BBX, HES4, PBX3, YBX3, BMPR2, CD46, COL4A1 , COL4A2, LAMC1 , ITGAV, and ITGB.
- the one or more OSCs further express one or more genes selected from FOXO1 , CDH1 , CYP19A1 , RARRES2, NOTCH2, NRG1 , BMPR1 B, EGFR (ERBB1 ), and ERBB4. In some embodiments, the one or more OSCs further express one or more genes selected from RARRES2, NOTCH2, NOTCH3, ID3, and BMPR2. In some embodiments, the one or more OSCs further express genes CDH2 and/or NOTCH2. In some embodiments, the one or more OSCs do not exhibit significant expression of RARRES2.
- the one or more OSCs express NR2F2. In some embodiments, the one or more OSCs include ovarian stroma cells. In some embodiments, the one or more OSCs include granulosa cells and ovarian stroma cells.
- the one or more OSCs include more than 60% granulosa cells, more than 70% granulosa cells, more than 80% granulosa cells, more than 90% granulosa cells, or more than 95% granulosa cells.
- the one or more OSCs are obtained by differentiation of a population of iPSCs.
- the iPSCs are human iPSCs (hiPSCs).
- the hiPSCs express or overexpress transcription factor RUNX2.
- the hiPSCs express or overexpress transcription factor NR5A1 .
- the hiPSCs express or overexpress transcription factor GATA4.
- the hiPSCs express or overexpress transcription factor FOXL2.
- the hiPSCs express or overexpress transcription factors RUNX2 and NR5A1 . In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2 and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2 and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors GATA4 and FOXL2.
- the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, GATA4, and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 , GATA4, and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , GATA4, and FOXL2.
- the transcription factor expression or overexpression is induced by way of a doxycycline-responsive transcription regulatory element, such as a doxycycline-responsive promoter or enhancer.
- the hiPSCs are contacted with a Wnt/p-catenin pathway activator.
- the Wnt/p-catenin pathway activator is a Rho-associated protein kinase (ROCK) inhibitor, a glycogen synthase kinase-3 (GSK3) inhibitor, or a combination thereof.
- ROCK Rho-associated protein kinase
- GSK3 glycogen synthase kinase-3
- At least one of the one or more OSCs are encapsulated.
- the one or more OSCs are encapsulated in alginate, laminin, collagen, vitronectin, chitosan, hyaluronic acid, Poly-D-Lactone, or any mixture thereof.
- the one or more OSCs are encapsulated in laminin, such as laminin-521 .
- the one or more OSCs are encapsulated in vitronectin.
- the one or more OSCs have reduced expression, or undetectable expression, of one or more genes associated with pluripotency relative to an unmodified iPSC.
- the one or more genes associated with pluripotency include NANOG.
- the one or more genes associated with pluripotency include POU5F1 .
- the one or more OSCs produce one or more growth factors.
- the one or more growth factors include insulin-like growth factor (IGF), stem cell factor (SCF), epidermal growth factor (EGF), leukemia inhibitory factor (LIF), vascular endothelial growth factor (VEGF), bone morphogenetic proteins (BMPs), C-type natriuretic peptide (CNP), or any combination thereof.
- IGF insulin-like growth factor
- SCF stem cell factor
- EGF epidermal growth factor
- LIF leukemia inhibitory factor
- VEGF vascular endothelial growth factor
- BMPs bone morphogenetic proteins
- CNP C-type natriuretic peptide
- the one or more of the OSCs produce one or more steroids.
- the one or more steroids include estradiol, progesterone, or a combination thereof.
- the one or more steroids are produced in response to hormonal stimulation.
- the hormonal stimulation comprises FSH, androstenedione treatment, or a combination thereof.
- at least a portion of the one or more steroids is secreted.
- the one or more OSCs are cryopreserved.
- the composition further includes an in vitro maturation (IVM) media.
- the IVM media includes a cell culture media.
- the IVM media includes Medicult-IVM media.
- the IVM media includes one or more supplements.
- the one or more supplements include:
- HSA human serum albumin
- rFSH recombinant follicle stimulating hormone
- human chorionic gonadotropin optionally at a concentration of about 95 mIU/mL to about 105 mIU/mL, further optionally at a concentration of 100 mIU/mL;
- doxycycline optionally at a concentration of about 0.5 pg/mL to about 1 .5 pg/mL, further optionally at a concentration of 1 pg/mL; or any combination of the one or more supplements.
- the one or more oocytes are retrieved from a donor subject.
- the donor subject is from about 19 years old to about 45 years old.
- the subject is undergoing ovarian stimulation.
- the ovarian stimulation includes treatment with gonadotropin releasing hormone (GnRH).
- the ovarian stimulation includes treatment with one or more GnRH analogs.
- the one or more GnRH analog is a GnRH agonist or antagonist.
- the ovarian stimulation includes one or more ovulatory triggers.
- the one or more ovulatory triggers include human chorionic gonadotropin (hCG).
- the one or more ovulatory trigger comprises a GnRH agonist, optionally wherein the GnRH agonist is leuprolide.
- the ovarian stimulation includes FSH treatment. In some embodiments, the ovarian stimulation does not include FSH treatment. In some embodiments, the FSH treatment includes 300 international units (IU) to 700 IU of FSH. In some embodiments, the FSH treatment includes 400 IU to 600 IU of FSH. In some embodiments, the FSH treatment includes 1 , 2, 3, or more injections of FSH, optionally wherein the FSH treatment includes a plurality of injections, wherein each injection includes a dose of about 100 IU to about 200 IU of the FSH.
- the ovarian stimulation further includes clomiphene citrate administration, optionally wherein the clomiphene citrate is administered for up to 8 days as one or more doses, optionally wherein each dose is between 50 mg and150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110-130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg).
- the ovarian stimulation further includes one or more hCG triggers.
- the one or more hCG triggers includes 2,500 IU to 10,000 IU of hCG or about 200 pg to about 700 pg of hCG, optionally wherein the hCG is administered to the subject at a dose of about 400 pg to about 600 pg, further optionally wherein the hCG is administered to the subject at a dose of about 500 pg per dose.
- the one or more oocytes are present in cumulus oocyte complexes (COCs).
- the one or more oocytes include one or more denuded immature oocytes. In some embodiments, all of the one or more oocytes are denuded immature oocytes. In some embodiments, the one or more oocytes are not denuded.
- the one or more oocytes include one or more germinal vesicle (GV)- containing oocytes. In some embodiments, the one or more of the oocytes include one or more oocytes in metaphase I (Ml). In some embodiments, the one or more of the oocytes include one or more oocytes in metaphase II (Mil). In some embodiments, at least a portion of the one or more oocytes include one or more previously vitrified oocytes. In some embodiments, at least a portion of the one or more oocytes include one or more previously cryopreserved oocytes.
- GV germinal vesicle
- the one or more oocytes are co-cultured with the one or more OSCs.
- the one or more oocytes are evaluated for a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- the one or more co-cultured oocytes have morphological quality substantially the same as in vivo matured oocytes, wherein the morphological quality comprises oocyte size, oocyte zona size, oocyte color, oocyte shape, oocyte cytoplasmic granularity, oocyte polar body quality, and oocyte PVS quality.
- the one or more co-cultured oocytes have an improved maturation rate compared to oocytes in a culture that does not comprise the one or more OSCs.
- the one or more co-cultured oocytes have a second meiotic metaphase spindle located substantially in the same position as in vivo matured oocytes.
- the one or more co-cultured oocytes have a transcriptomic profile substantially the same as in vivo matured oocytes.
- the one or more oocytes are co-cultured with the one or more OSCs for about 20 hours, about 21 hours, about 22 hours, about 23 hours, about 24 hours, about 25 hours, about 26 hours, about 27 hours, about 28 hours, about 29 hours, about 30 hours, about 31 hours, about 32 hours, about 33 hours, about 34 hours, about 35 hours, or about 36 hours. In some embodiments, the one or more oocytes are co-cultured with the one or more OSCs for about 24 hours to about 28 hours.
- the one or more oocytes co-cultured with the one or more OSCs form one or more blastocytes following contact with one or more mature sperm cells.
- the one or more oocytes are co-cultured in direct contact with the one or more OSCs. In some embodiments, the one or more oocytes do not directly contact the OSCs.
- the culture system is a suspension culture. In some embodiments, the culture system is an adherent culture.
- the disclosure features a method of cultivating oocytes, wherein one or more immature oocytes are co-cultured with one or more OSCs.
- the disclosure features a method of preparing one or more oocytes that have previously been retrieved from a human subject for use in an assisted reproduction technology (ART) procedure, the method including co-culturing the one or more oocytes with one or more OSCs.
- ART assisted reproduction technology
- the disclosure features a method of producing a mature oocyte for use in an ART procedure, the method including co-culturing one or more oocytes that have previously been retrieved from a human subject with a population of ovarian support cells that have been differentiated from one or more iPSCs.
- the disclosure features a method of inducing oocyte maturation in vitro, the method including co-culturing one or more oocytes with a population of ovarian support cells that have been differentiated from one or more iPSCs, optionally wherein the co-culturing is conducted for a period of from about 6 hours to about 120 hours.
- the disclosure features method of producing a mature oocyte for use in an ART procedure, the method including:
- the disclosure features a method of promoting oocyte maturation for a subject undergoing an ART procedure and that has previously been administered one or more follicular triggering agents during a follicular triggering period, the method including:
- the one or more oocytes are evaluated for a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml- stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml- stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- the one or more co-cultured oocytes have morphological quality substantially the same as in vivo matured oocytes, wherein the morphological quality comprises oocyte size, oocyte zona size, oocyte color, oocyte shape, oocyte cytoplasmic granularity, oocyte polar body quality, and oocyte PVS quality.
- the one or more co-cultured oocytes have an improved maturation rate compared to oocytes in a culture that does not include the one or more OSCs. In some embodiments, the one or more co-cultured oocytes have an improved maturation rate compared to oocytes matured in vivo. In some embodiments, the one or more co-cultured oocytes have a second meiotic metaphase spindle located substantially in the same position as in vivo matured oocytes. In some embodiments, the one or more co-cultured oocytes have a transcriptomic profile substantially the same as in vivo matured oocytes.
- the one or more OSCs express FOXL2, AMHR2, CD82 or any combination thereof. In some embodiments, the one or more OSCs express one or more of the genes selected from GJA1 , MDK, BBX, HES4, PBX3, YBX3, BMPR2, CD46, COL4A1 , COL4A2, LAMC1 , ITGAV, and ITGB. In some embodiments, the one or more OSCs further express one or more of the genes selected from FOXO1 , CDH1 , CYP19A1 , RARRES2, NOTCH2, NRG1 , BMPR1 B, EGFR (ERBB1 ), and ERBB4.
- the one or more OSCs further express one or more of the genes selected from RARRES2, NOTCH2, NOTCH3, ID3, and BMPR2. In some embodiments, the one or more OSCs further express genes CDH2 and/or NOTCH2, with no significant gene expression of RARRES2. In some embodiments, the one or more OSCs include granulosa cells.
- the one or more OSCs express NR2F2. In some embodiments, the one or more OSCs include ovarian stroma cells.
- the one or more OSCs include granulosa cells and ovarian stroma cells. In some embodiments, the one or more OSCs include more than 60% granulosa cells, more than 70% granulosa cells, more than 80% granulosa cells, more than 90% granulosa cells, or more than 95% granulosa cells.
- the one or more OSCs are obtained by differentiation of a population of iPSCs.
- the iPSCs are hiPSCs.
- the hiPSCs express or overexpress transcription factor RUNX2.
- the hiPSCs express or overexpress transcription factor NR5A1 .
- the hiPSCs express or overexpress transcription factor GATA4.
- the hiPSCs express or overexpress transcription factor FOXL2.
- the hiPSCs express or overexpress transcription factors RUNX2 and NR5A1 . In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2 and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2 and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors GATA4 and FOXL2.
- the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, GATA4, and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 , GATA4, and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , GATA4, and FOXL2.
- the expression or overexpression of any of the foregoing transcription factors is induced by way of a doxycycline-responsive transcription regulatory element, such as a doxycycline-responsive promoter or enhancer.
- the hiPSCs are contacted with a Wnt/p-catenin pathway activator.
- the Wnt/p-catenin pathway activator is a Rho-associated protein kinase (ROCK) inhibitor, a glycogen synthase kinase-3 (GSK3) inhibitor, or a combination thereof.
- ROCK Rho-associated protein kinase
- GSK3 glycogen synthase kinase-3
- the one or more OSCs are encapsulated. In some embodiments, the one or more OSCs are encapsulated in alginate, laminin, collagen, vitronectin, chitosan, hyaluronic acid, Poly- D-Lactone, or a mixture thereof. In some embodiments, the one or more OSCs are encapsulated in laminin, optionally wherein the laminin is laminin-521. In some embodiments, the one or more OSCs are encapsulated in vitronectin.
- the one or more OSCs have low or undetectable expression of one or more genes associated with pluripotency relative to an iPSC.
- the one or more genes associated with pluripotency include NANOG.
- the one or more genes associated with pluripotency include POU5F1 .
- the one or more of the OSCs produce one or more growth factors.
- the growth factors include IGF, SCF, EGF, LIF, VEGF, BMPs, CNP, or any combination thereof. In some embodiments, at least a portion of the one or more growth factors is secreted.
- the one or more OSCs produce one or more steroids.
- the one or more steroids include estradiol, progesterone, or a combination thereof.
- the one or more steroids are produced in response to hormonal stimulation of the OSCs.
- the hormonal stimulation includes exposure to FSH, androstenedione, or a combination thereof.
- at least a portion of the one or more steroids is secreted.
- the one or more OSCs are cryopreserved.
- the composition further includes an in vitro maturation (IVM) media.
- IVM in vitro maturation
- the IVM media includes a cell culture media.
- the IVM media includes Medicult-IVM media.
- the IVM media includes one or more supplements.
- the one or more supplements includes:
- HSA human serum albumin
- rFSH recombinant follicle stimulating hormone
- human chorionic gonadotropin optionally at a concentration of about 95 mIU/mL to about 105 mIU/mL, further optionally at a concentration of 100 mIU/mL;
- doxycycline optionally at a concentration of about 0.5 pg/mL to about 1 .5 pg/mL, further optionally at a concentration of 1 pg/mL; or any combination of the one or more supplements.
- the one or more oocytes are retrieved from a donor subject.
- the donor subject is from about 19 years old to about 45 years old.
- the subject is undergoing ovarian stimulation.
- the ovarian stimulation includes treatment with gonadotropin releasing hormone (GnRH).
- the ovarian stimulation includes treatment with one or more GnRH analogs.
- the one or more GnRH analog is a GnRH agonist or antagonist.
- the ovarian stimulation includes one or more ovulatory triggers.
- the one or more ovulatory triggers include human chorionic gonadotropin (hCG).
- the one or more ovulatory trigger comprises a GnRH agonist, optionally wherein the GnRH agonist is leuprolide.
- the ovarian stimulation includes FSH treatment. In some embodiments, the ovarian stimulation does not include FSH treatment. In some embodiments, the FSH treatment includes 300 international units (IU) to 700 IU of FSH. In some embodiments, the FSH treatment includes 400 IU to 600 IU of FSH. In some embodiments, the FSH treatment includes 1 , 2, 3, or more injections of FSH, optionally wherein the FSH treatment includes a plurality of injections, wherein each injection includes a dose of about 100 IU to about 200 IU of the FSH.
- the ovarian stimulation further includes clomiphene citrate administration, optionally wherein the clomiphene citrate is administered for up to 8 days as one or more doses, optionally wherein each dose is between 50 mg and 150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110-130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg).
- the ovarian stimulation further includes one or more hCG triggers.
- the one or more hCG triggers includes 2,500 IU to 10,000 IU of hCG or about 200 pg to about 700 pg of hCG, optionally wherein the hCG is administered to the subject at a dose of about 400 pg to about 600 pg, further optionally wherein the hCG is administered to the subject at a dose of about 500 pg per dose.
- the one or more oocytes are in cumulus oocyte complexes (COCs).
- the one or more oocytes include one or more denuded immature oocytes. In some embodiments, all of the one or more oocytes are denuded immature oocytes. In some embodiments, the one or more oocytes are not denuded.
- the one or more oocytes include one or more germinal vesicle (GV)- containing oocytes. In some embodiments, the one or more of the oocytes include one or more oocytes in metaphase I (Ml). In some embodiments, the one or more of the oocytes include one or more oocytes in metaphase II (Mil). In some embodiments, at least a portion of the one or more oocytes include one or more previously vitrified oocytes. In some embodiments, at least a portion of the one or more oocytes include one or more previously cryopreserved oocytes.
- GV germinal vesicle
- the one or more oocytes are co-cultured with the one or more OSCs.
- the one or more oocytes are evaluated for a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- the one or more co-cultured oocytes have morphological quality substantially the same as in vivo matured oocytes, wherein the morphological quality comprises oocyte size, oocyte zona size, oocyte color, oocyte shape, oocyte cytoplasmic granularity, oocyte polar body quality, and oocyte PVS quality.
- the one or more co-cultured oocytes have an improved maturation rate compared to oocytes in a culture that does not comprise the one or more OSCs.
- the one or more co-cultured oocytes have a second meiotic metaphase spindle located substantially in the same position as in vivo matured oocytes.
- the one or more co-cultured oocytes have a transcriptomic profile substantially the same as in vivo matured oocytes.
- the one or more oocytes are co-cultured with the one or more OSCs for about 20 hours, about 21 hours, about 22 hours, about 23 hours, about 24 hours, about 25 hours, about 26 hours, about 27 hours, about 28 hours, about 29 hours, about 30 hours, about 31 hours, about 32 hours, about 33 hours, about 34 hours, about 35 hours, or about 36 hours. In some embodiments, the one or more oocytes are co-cultured with the one or more OSCs for about 24 hours to about 28 hours.
- the one or more oocytes co-cultured with the one or more OSCs form one or more blastocytes following contact with one or more mature sperm cells.
- the one or more oocytes are co-cultured in direct contact with the one or more OSCs. In some embodiments, the one or more oocytes do not directly contact the OSCs.
- the culture system is a suspension culture. In some embodiments, the culture system is an adherent culture.
- the disclosure features a method of promoting differentiation of one or more induced pluripotent stem cells (iPSCs) to one or more ovarian support cells (OSCs), the method comprising:
- the disclosure features method of producing one or more ovarian support cells (OSCs) from one or more induced pluripotent stem cells (iPSCs), the method comprising:
- the disclosure features a method of preparing a composition comprising one or more ovarian support cells (OSCs), the method comprising:
- the iPSCs are human iPSCs (hiPSCs). In some embodiments, the iPSCs were previously cryopreserved. In some embodiments, the co-culturing is performed in in vitro maturation (IVM) media. In some embodiments, the IVM media includes a cell culture media. In some embodiments, the IVM media includes Medicult-IVM media. In some embodiments, the IVM media includes one or more supplements. In some embodiments, the one or more supplements include:
- HSA human serum albumin
- rFSH recombinant follicle stimulating hormone
- hCG human chorionic gonadotropin
- the induction of iPSCs to OSCs occurs for about 1 day to about 10 days, optionally wherein the induction occurs for about 5 days.
- the iPSCs are cultured in a media that includes a matrix.
- the matrix includes alginate, laminin, collagen, vitronectin, chitosan, hyaluronic acid, Poly- D-Lactone, or a mixture thereof.
- matrix includes laminin, optionally wherein the laminin is laminin-521 .
- the matrix includes vitronectin.
- the iPSCs are reprogrammed using a transposase method to carry one or more inducible transcription factors.
- the iPSCs are transformed via electroporation, liposome-mediated transformation, or viral-mediated gene transfer.
- the expression or overexpression of the one or more transcription factors is induced in the presence of doxycycline.
- the iPSCs are contacted with a Wnt/p-catenin pathway activator.
- the Wnt/p-catenin pathway activator is a Rho-associated protein kinase (ROCK) inhibitor, a glycogen synthase kinase-3 (GSK3) inhibitor, or a combination thereof.
- the one or more OSCs express FOXL2, AMHR2, CD82, or any combination thereof. In some embodiments, the one or more OSCs express one or more of the following genes selected from GJA1 , MDK, BBX, HES4, PBX3, YBX3, BMPR2, CD46, COL4A1 , COL4A2, LAMC1 , ITGAV, and ITGB. In some embodiments, the one or more OSCs further express one or more of the genes selected from FOXO1 , CDH1 , CYP19A1 , RARRES2, NOTCH2, NRG1 , BMPR1 B, EGFR (ERBB1 ), and ERBB4.
- the one or more OSCs further express one or more of the genes selected from RARRES2, NOTCH2, NOTCH3, ID3, and BMPR2. In some embodiments, the one or more OSCs further express genes CDH2 and/or NOTCH2, optionally with no significant gene expression of RARRES2.
- the one or more OSCs include one or more granulosa cells.
- one or more OSCs express NR2F2. In some embodiments, the one or more OSCs include one or more ovarian stroma cells.
- the one or more OSCs include granulosa cells and ovarian stroma cells. In some embodiments, the one or more OSCs include more than 60% granulosa cells, more than 70% granulosa cells, more than 80% granulosa cells, more than 90% granulosa cells, or more than 95% granulosa cells.
- the one or more OSCs have low or undetectable expression of one or more genes associated with pluripotency relative to an iPSC.
- the one or more genes associated with pluripotency include NANOG.
- the one or more genes associated with pluripotency include POU5F1 .
- the one or more of the OSCs produce one or more growth factors.
- the growth factors include IGF, SCF, EGF, LIF, VEGF, BMPs, CNP, or any combination thereof. In some embodiments, at least a portion of the one or more growth factors is secreted.
- the one or more OSCs produce one or more steroids.
- the one or more steroids include estradiol, progesterone, or a combination thereof.
- the one or more steroids are produced in the presence of one or more hormones.
- the one or more hormones includes exposure to FSH, androstenedione, or a combination thereof.
- at least a portion of the one or more steroids is secreted.
- the one or more oocytes retrieved from the subject are immature oocytes.
- the co-culturing the one or more OSCs with one or more oocytes promotes the maturation of the one or more oocytes.
- the method further includes harvesting the one or more oocytes for an assisted reproductive technology procedure.
- the subject is undergoing ovarian stimulation prior to the retrieval of one or more oocytes.
- the ovarian stimulation includes treatment with gonadotropin releasing hormone (GnRH).
- the ovarian stimulation includes treatment with one or more GnRH analogs.
- the one or more GnRH analog is a GnRH agonist or antagonist.
- the ovarian stimulation includes one or more ovulatory triggers.
- the one or more ovulatory triggers includes hCG.
- the one or more ovulatory trigger includes a GnRH agonist, optionally wherein the GnRH agonist is leuprolide.
- the ovarian stimulation includes FSH treatment. In some embodiments, the ovarian stimulation does not include FSH treatment. In some embodiments, the FSH treatment includes 300 IU to 700 IU of FSH. In some embodiments, the FSH treatment includes 400 IU to 600 IU of FSH. In some embodiments, the FSH treatment includes 1 , 2, 3, or more injections of FSH, optionally wherein the FSH treatment comprises a plurality of injections, wherein each injection comprises a dose of about 100 IU to about 200 IU of the FSH.
- the ovarian stimulation further includes clomiphene citrate administration, optionally wherein the clomiphene citrate is administered for up to 8 days as one or more doses, wherein each dose is between 50 mg and 150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110-130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg).
- the ovarian stimulation further includes one or more hCG triggers.
- the one or more hCG triggers includes 2,500 IU to 10,000 IU of hCG or about 200 pg to about 700 pg of hCG, optionally wherein the hCG is administered to the subject at a dose of about 400 pg to about 600 pg, further optionally wherein the hCG is administered to the subject at a dose of about 500 pg per dose.
- the one or more oocytes are in cumulus oocyte complexes (COCs).
- the one or more oocytes include one or more denuded immature oocytes. In some embodiments, all of the one or more oocytes are denuded immature oocytes. In some embodiments, the one or more oocytes are not denuded prior to or following co-culturing.
- the one or more oocytes include one or more germinal vesicle (GV)- containing oocytes. In some embodiments, the one or more oocytes include one or more oocytes in metaphase I (Ml). In some embodiments, the one or more oocytes include one or more oocytes in metaphase II (Mil). In some embodiments, at least a portion of the one or more oocytes include one or more previously vitrified oocytes. In some embodiments, at least a portion of the one or more oocytes includes one or more previously cryopreserved oocytes.
- GV germinal vesicle
- the one or more oocytes are evaluated for a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- the one or more co-cultured oocytes have morphological quality substantially the same as in vivo matured oocytes, wherein the morphological quality comprises oocyte size, oocyte zona size, oocyte color, oocyte shape, oocyte cytoplasmic granularity, oocyte polar body quality, and oocyte PVS quality.
- the one or more co-cultured oocytes have an improved maturation rate compared to oocytes in a culture that does not comprise the one or more OSCs.
- the one or more co-cultured oocytes have a second meiotic metaphase spindle located substantially in the same position as in vivo matured oocytes.
- the one or more co- cultured oocytes have a transcriptomic profile substantially the same as in vivo matured oocytes.
- the one or more oocytes are co-cultured with the one or more OSCs for about 20 hours, about 21 hours, about 22 hours, about 23 hours, about 24 hours, about 25 hours, about 26 hours, about 27 hours, about 28 hours, about 29 hours, about 30 hours, about 31 hours, about 32 hours, about 33 hours, about 34 hours, about 35 hours, or about 36 hours.
- the one or more oocytes are cultured with the one or more OSCs for about 24 hours to about 28 hours.
- method further includes isolating one or more Mil-stage oocytes from the co-culture including the one or more oocytes retrieved from the subject with the one or more OSCs.
- the one or more oocytes co-cultured with the one or more OSCs form one or more blastocytes following contact with one or more mature sperm cells.
- the one or more oocytes are cultured in direct contact with the one or more OSCs. In some embodiments, the one or more oocytes do not directly contact the one or more OSCs.
- the co-culture is a suspension co-culture. In some embodiments, the coculture is an adherent co-culture.
- the disclosure features a cell culture system including one or more ovarian support cells (OSCs), wherein the system promotes maturation of one or more oocytes.
- OSCs ovarian support cells
- the one or more OSCs further express one or more genes selected from FOXO1 , CDH1 , CYP19A1 , RARRES2, NOTCH2, NRG1 , BMPR1 B, EGFR (ERBB1 ), and ERBB4. In some embodiments, the one or more OSCs further express one or more genes selected from RARRES2, NOTCH2, NOTCH3, ID3, and BMPR2. In some embodiments, the one or more OSCs further express genes CDH2 and/or NOTCH2. In some embodiments, the one or more OSCs do not exhibit significant expression of RARRES2. In some embodiments, the one or more OSCs express NR2F2. In some embodiments, the one or more OSCs include ovarian stroma cells. In some embodiments, the one or more OSCs include granulosa cells and ovarian stroma cells.
- the one or more OSCs include more than 60% granulosa cells, more than 70% granulosa cells, more than 80% granulosa cells, more than 90% granulosa cells, or more than 95% granulosa cells.
- the one or more OSCs are obtained by differentiation of a population of iPSCs.
- the iPSCs are human iPSCs (hiPSCs).
- the hiPSCs express or overexpress transcription factor RUNX2.
- the hiPSCs express or overexpress transcription factor NR5A1 .
- the hiPSCs express or overexpress transcription factor GATA4.
- the hiPSCs express or overexpress transcription factor FOXL2.
- the hiPSCs express or overexpress transcription factors RUNX2 and NR5A1 . In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2 and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2 and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors GATA4 and FOXL2.
- the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , and GATA4. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, GATA4, and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors NR5A1 , GATA4, and FOXL2. In some embodiments, the hiPSCs express or overexpress transcription factors RUNX2, NR5A1 , GATA4, and FOXL2.
- the transcription factor expression or overexpression is under the control of doxycycline.
- the hiPSCs are contacted with a Wnt/p-catenin pathway activator.
- the Wnt/p-catenin pathway activator is a Rho-associated protein kinase (ROCK) inhibitor, a glycogen synthase kinase-3 (GSK3) inhibitor, or a combination thereof.
- ROCK Rho-associated protein kinase
- GSK3 glycogen synthase kinase-3
- At least one of the one or more OSCs are encapsulated.
- the one or more OSCs are encapsulated in alginate, laminin, collagen, vitronectin, chitosan, hyaluronic acid, Poly-D-Lactone, or any mixture thereof.
- the one or more OSCs are encapsulated in laminin, optionally wherein the laminin is laminin-521 .
- the one or more OSCs are encapsulated in vitronectin.
- the one or more OSCs have lower expression, or undetectable expression, of one or more genes associated with pluripotency relative to an iPSC.
- the one or more genes associated with pluripotency include NANOG.
- the one or more genes associated with pluripotency include POU5F1 .
- the OSCs produce one or more growth factors.
- the one or more growth factors include insulin-like growth factor (IGF), stem cell factor (SCF), epidermal growth factor (EGF), leukemia inhibitory factor (LIF), vascular endothelial growth factor (VEGF), bone morphogenetic proteins (BMPs), C-type natriuretic peptide (CNP), or any combination thereof.
- IGF insulin-like growth factor
- SCF stem cell factor
- EGF epidermal growth factor
- LIF leukemia inhibitory factor
- VEGF vascular endothelial growth factor
- BMPs bone morphogenetic proteins
- CNP C-type natriuretic peptide
- the one or more of the OSCs produce one or more steroids.
- the one or more steroids include estradiol, progesterone, or a combination thereof.
- the one or more steroids are produced in response to hormonal stimulation.
- the hormonal stimulation comprises FSH, androstenedione treatment, or a combination thereof.
- at least a portion of the one or more steroids is secreted.
- the one or more OSCs are cryopreserved.
- the composition further includes an in vitro maturation (IVM) media.
- IVM in vitro maturation
- the IVM media includes a cell culture media.
- the IVM media includes Medicult-IVM media.
- the IVM media includes one or more supplements.
- the one or more supplements includes:
- HSA human serum albumin
- rFSH recombinant follicle stimulating hormone
- human chorionic gonadotropin optionally at a concentration of about 95 mIU/mL to about 105 mIU/mL, further optionally at a concentration of 100 mIU/mL;
- doxycycline optionally at a concentration of about 0.5 pg/mL to about 1 .5 pg/mL, further optionally at a concentration of 1 pg/mL; or any combination of the one or more supplements.
- the one or more oocytes are retrieved from a donor subject.
- the donor subject is from about 19 years old to about 45 years old.
- the subject is undergoing ovarian stimulation.
- the ovarian stimulation includes treatment with gonadotropin releasing hormone (GnRH).
- the ovarian stimulation includes treatment with one or more GnRH analogs.
- the one or more GnRH analog is a GnRH agonist or antagonist.
- the ovarian stimulation includes one or more ovulatory triggers.
- the one or more ovulatory triggers include human chorionic gonadotropin (hCG).
- the one or more ovulatory trigger comprises a GnRH agonist, optionally wherein the GnRH agonist is leuprolide.
- the ovarian stimulation includes FSH treatment. In some embodiments, the ovarian stimulation does not include FSH treatment. In some embodiments, the FSH treatment includes 300 international units (IU) to 700 IU of FSH. In some embodiments, the FSH treatment includes 400 IU to 600 IU of FSH. In some embodiments, the FSH treatment includes 1 , 2, 3, or more injections of FSH, optionally wherein the FSH treatment includes a plurality of injections, wherein each injection includes a dose of about 100 IU to about 200 IU of the FSH.
- the ovarian stimulation further includes clomiphene citrate administration, optionally wherein the clomiphene citrate is administered for up to 8 days as one or more doses, wherein each dose is between 50 mg and 150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110-130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg).
- the ovarian stimulation further includes one or more hCG triggers.
- the one or more hCG triggers includes 2,500 IU to 10,000 IU of hCG or about 200 pg to about 700 pg of hCG, optionally wherein the hCG is administered to the subject at a dose of about 400 pg to about 600 pg, further optionally wherein the hCG is administered to the subject at a dose of about 500 pg per dose.
- the one or more oocytes are in cumulus oocyte complexes (COCs).
- the one or more oocytes include one or more denuded immature oocytes. In some embodiments, all of the one or more oocytes are denuded immature oocytes. In some embodiments, the one or more oocytes are not denuded.
- the one or more oocytes include one or more germinal vesicle (GV)- containing oocytes. In some embodiments, the one or more of the oocytes include one or more oocytes in metaphase I (Ml). In some embodiments, the one or more of the oocytes include one or more oocytes in metaphase II (Mil). In some embodiments, at least a portion of the one or more oocytes include one or more previously vitrified oocytes. In some embodiments, at least a portion of the one or more oocytes include one or more previously cryopreserved oocytes.
- GV germinal vesicle
- the one or more oocytes are co-cultured with the one or more OSCs.
- the one or more oocytes are evaluated for a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- a parameter selected from the group consisting of total oocyte score, GV-stage to Mil-stage oocyte maturation rate, GV-stage to Ml-stage oocyte maturation rate, Ml-stage to Mil-stage oocyte maturation rate, average oocyte shape, average oocyte size, average ooplasm quality, average perivitelline space (PVS) quality, average zona pellucida (ZP) quality, and average polar body quality.
- the one or more co-cultured oocytes have morphological quality substantially the same as in vivo matured oocytes, wherein the morphological quality comprises oocyte size, oocyte zona size, oocyte color, oocyte shape, oocyte cytoplasmic granularity, oocyte polar body quality, and oocyte PVS quality.
- the one or more co-cultured oocytes have an improved maturation rate compared to oocytes in a culture that does not comprise the one or more OSCs.
- the one or more co-cultured oocytes have a second meiotic metaphase spindle located substantially in the same position as in vivo matured oocytes.
- the one or more co-cultured oocytes have a transcriptomic profile substantially the same as in vivo matured oocytes.
- the one or more oocytes are co-cultured with the one or more OSCs for about 20 hours, about 21 hours, about 22 hours, about 23 hours, about 24 hours, about 25 hours, about 26 hours, about 27 hours, about 28 hours, about 29 hours, about 30 hours, about 31 hours, about 32 hours, about 33 hours, about 34 hours, about 35 hours, or about 36 hours. In some embodiments, the one or more oocytes are co-cultured with the one or more OSCs for about 24 hours to about 28 hours.
- the one or more oocytes co-cultured with the one or more OSCs form one or more blastocytes following contact with one or more mature sperm cells.
- the one or more oocytes are co-cultured in direct contact with the one or more OSCs. In some embodiments, the one or more oocytes do not directly contact the OSCs.
- the culture system is a suspension culture. In some embodiments, the culture system is an adherent culture.
- the disclosure features a kit that includes any one of the preceding embodiments of the ex vivo composition and a package insert, wherein the package insert instructs a user of the kit to co-culture the population of ovarian support cells with one or more oocytes in accordance with any one of the preceding methods.
- the disclosure features a kit that includes a vial that contains a population of iPSCs and a package insert, wherein the package insert instructs a user of the kit to differentiate the population of iPSCs to one or more ovarian support cells in accordance with any one of the preceding methods.
- the disclosure features a kit that includes a vial that contains one or more OSCs and a package insert, wherein the package insert instructs a user of the kit to cultivate any one of the preceding embodiments of the cell culture system.
- FIG. 1 A is a series of UMAP projections and bar graphs depicting single cell RNA-sequencing (scRNA-seq) data obtained from six independent batches of hiPSCs after five days of differentiating with three inducible transcription factors: NR5A1 , RUNX2, and GATA4.
- the resulting gene expression profiles of the batches were partitioned into clusters (Early GC, GC, Atresia/luteolysis, Mitochondrial gene enriched, and Ribosomal gene enriched) and subclusters (Early GC I, Early GC II, and Early GC III as well as GC I, GC II, and GC III).
- FIG. 1B is a collection of gene expression enrichment data derived from the scRNA-seq data from (FIG. 1 A), shown as a bubble plot, violin plots, and UMAP projections, each of which depict the relative expression of genes in each cluster or subcluster.
- FIG. 1C is a series of UMAP projections depicting gene expression enrichment data of the differentiated hiPSCs relative to gene expression data that corresponds to Primary GC, Secondary GC, Antral GC, and Pre-Ovulatory GC gene signatures.
- FIG. 2 is a series of UMAP projections and bar graphs depicting scRNA-seq clustering data of differentiated hiPSCs that were cultured on a matrix of either laminin or vitronectin.
- FIG. 3A is an image of a gel depicting genotype data from a PCR reaction to assess the relative expression levels of transcription factors NR5A1 , GATA4, and RUNX2 from individual clones following hiPSC reprogramming.
- FIG. 3B is a series of representative micrographs showing the morphology of the indicated clones following hiPSC differentiation.
- FIG. 3C is a graph showing relative expression levels of ovarian support cell biomarkers and an hiPSC biomarker expressed in each indicated clone based on a cut-off (dotted line) as measured by flow cytometry.
- FIG. 3D is a bar graph depicting the levels of estradiol (E2) secreted by the selected clones in response to application of follicle stimulating hormone (+F), application of androstenedione (+A), or application of a combination of follicle stimulating hormone and androstenedione (+F+A) to the cell culture media (DK10).
- FIG. 3E is a table characterizing the indicated clones based on the ratio of OSC:hiPSC, cell viability, relative expression level of indicated biomarkers, and expression level of progesterone (P4) and estradiol (E2).
- FIG. 4A is a series of fluorescent microscopy micrographs showing the relative expression of indicated hiPSC biomarkers and a karyotype graph to show the cellular identity of the selected clones prior to reprogramming.
- FIG. 4B is a UMAP projection and a bar graph depicting scRNA-seq clustering data of two batches of independently reprogrammed hiPSC populations derived from the same clone.
- FIG. 5 is an exemplary table of metabolite formulations.
- FIG. 6 is an exemplary flow-chart for preparing a granulosa co-culture.
- FIG. 7 is a schematic of an apparatus for aiding in human oocyte maturation in vitro.
- FIG. 8A is a schematic of the experimental co-culture IVM approach.
- hiPSCs are differentiated using inducible transcription factor overexpression to form ovarian supporting cells (OSCs).
- OSCs ovarian supporting cells
- Immature human cumulus oocyte complexes (COCs) are obtained from donors in the clinic after undergoing abbreviated gonadotropin stimulation.
- COCs Immature human cumulus oocyte complexes
- COCs are introduced for IVM co-culture. Oocyte maturation and morphological quality are assessed after 24-28 hours IVM co-culture, and samples are banked for analysis or utilized for embryo formation.
- FIG. 9A shows the maturation rate of oocytes after 24-28 hour IVM experiments in Experiment 1 , including oocyte co-culture with OSCs, or in Media Control, n indicates the number of individual oocytes in each culture condition. Error bars indicate mean ⁇ SEM. p-value is derived from unpaired t-test comparing OSC-IVM to Media Control condition.
- TOS Total Oocyte Score
- FIG. 10A shows the maturation rate of oocytes after 28-hour IVM experiments in Experiment 2, including oocyte co-culture with OSCs or in Commercially available IVM Control, n indicates the number of individual oocytes in each culture condition. Error bars indicate mean ⁇ SEM. p-value derived from paired t-test comparing Experimental OSC-IVM to Control Condition (Commercial IVM Control).
- TOS Total Oocyte Score
- FIG. 11 A shows the embryo formation outcomes after 28-hour IVM experiments in the subset of oocytes utilized for embryo formation in Experiment 2, including oocyte co-culture with OSCs or in Commercially available IVM Control. Error bars indicate mean ⁇ SEM. Results are displayed as a percentage of total COCs treated in the group. Outcomes for fertilization, cleavage, blastocyst formation, high quality blastocyst formation and euploid blastocyst formation are assessed for both IVM conditions.
- FIG. 11B shows representative images of embryo formation in OSC-IVM versus Commercial IVM conditions at day 3 cleavage, as well as day 5, 6, and 7 of blastocyst formation. Embryos that were of suitable vitrification quality are labeled as “usable quality blast” and were utilized for trophectoderm biopsy.
- FIG. 12A is a schematic of the experimental co-culture IVM approach.
- hiPSCs were differentiated using inducible transcription factor overexpression to form OSCs.
- Human oocytes were obtained from donors in the clinic after undergoing standard gonadotropin stimulation, and immature oocytes (GV and Ml) identified after denuding were allocated to this research study.
- GV and Ml immature oocytes
- dishes were prepared including OSCs seeding as required, and immature oocytes were introduced for IVM co-culture. Oocyte maturation and health were assessed after 24-28 hours IVM co-culture, and oocyte samples were banked for further analyses.
- FIG. 13A shows the maturation rate of oocytes after 24-28 hour IVM experiments, including oocyte co-culture with OSCs (OSC-IVM), or in Media Control (Media-IVM).
- OSC-IVM oocyte co-culture with OSCs
- Media-IVM Media Control
- n indicates the number of individual oocytes in each culture condition. Error bars indicate mean ⁇ SEM.
- TOS Total Oocyte Scores
- FIG. 14A shows representative images of Mil oocytes after 28-hour IVM co-culture with OSCs, stained with fluorescent alpha-tubulin dye to visualize the meiotic spindle. Blue lines transecting the middle of the PB1 and the spindle assembly from the oocyte center were used to derive the PB1 -spindle angle. PB1 -spindle angle ranges are indicated above. An example of an Mil with a missing spindle is provided from the Media-IVM condition.
- FIG. 14B shows quantification of the angle between the PB1 and spindle, derived from oocyte fluorescence imaging analysis (as in FIG. 14A).
- FIG. 15B shows UMAP projections colored by scores for each of the gene marker sets (GV and IVF Mil).
- FIG. 15C shows UMAP projection generated from the scores of cells for each of the two signature marker sets (GV vs IVF MH), colored by experimental condition, oocyte maturation state, and Leiden cluster.
- FIG. 15D shows quantification of oocytes in each maturation outcome (GV, Ml and MH) by experimental condition (IVM or IVF), with color distribution indicating percentage of population in each Leiden cluster. Striped bars are utilized to denote clusters with predominantly I VF-like characteristics.
- FIG. 16A shows immunofluorescence images of human ovaroid (F66/N.R1 .G.F #4 granulosa-like cells + hPGCLCs) sections at days 2, 4, 14, and 32 of culture, stained for FOXL2 (granulosa), OCT4 (germ cell/pluripotent), and DAZL (mature germ cell). Scale bars are 40 pm.
- FIG. 16B shows mouse ovaroid (fetal mouse ovarian somatic cells + hPGCLCs) sections stained as in FIG. 18A. Scale bars are 40 pm.
- FIG. 16C shows the fraction of OCT4+ and DAZL+ cells relative to the total (DAPI+) over time in human ovaroids and mouse xenovaroids. Counts were performed at 11 time points on images from 2 replicates of human ovaroids (F66/N.R1 .G.F #4 and F66/N.R2 #1 granulosa-like cells + hPGCLCs) and 1 replicate of mouse xeno-ovaroids.
- FIG. 16D shows immunofluorescence images of human ovaroid (F66/N.R2 #1 granulosa-like cells + hPGCLCs) sections at days 4 and 8 of culture, stained for SOX17 (germ cell), TFAP2C (early germ cell), and AMHR2 (granulosa). Scale bars are 40 pm.
- FIG. 16E shows DAZL and OCT4 expression observed by immunofluorescence in day 16 ovaroids. Some DAZL+OCT4- cells (arrows) are visible, as well as DAZL+OCT4+ cells (arrows). Ovaroids are also beginning to form follicle-like morphology (arrows). Scale bars are 40 pm.
- FIG. 17A shows day 35 human ovaroid (F66/N.R1 .G #7 + hPGCLC) sections stained for FOXL2, OCT4, and AMHR2. Scale bars are 40 pm. Follicle-like structures are marked with triangles.
- FIG. 17B shows a whole-ovaroid view of follicle-like structures in human ovaroids (F66/N.R1 .G #7). Scale bars are 1 mm.
- FIG. 17C shows a section of human ovaroid (F66/N.R1 .G.F #4 + hPGCLC) at day 70 of culture, stained for FOXL2, NR2F2, and AMHR2, showing multiple small follicles (triangles) consisting single layers of FOXL2+AMHR2+ cells. NR2F2+ cells are interspersed between these. Scale bars are 100 pm.
- FIG. 17D shows a section of human ovaroid (F66/N.R2 #1 + hPGCLC) at day 70 of culture, stained for FOXL2, NR2F2, and AMHR2, showing an antral follicle consisting of FOXL2+AMHR2+ granulosa-like cells arranged in several layers around a central cavity.
- NR2F2 staining is visible outside of the follicle (marked ‘Stroma’). Scale bars are 100 pm.
- FIG. 18A shows the expression (Iog2 CPM) of selected granulosa (FOXL2), stroma/theca (NR2F2), and germ cell (PRDM1 ) markers. Expression is from scRNA-seq analysis of ovaroids (F66/N.R1 .G.F #4 granulosa-like cells + hPGCLCs). Data from all samples (days 2, 4, 8, and 14) were combined for joint dimensionality reduction and clustering.
- FIG. 18B shows Leiden clustering of four main clusters; the expression (Iog2 CPM) of marker genes is plotted for each cluster from the scRNA-seq analysis of ovaroids (as in FIG. 18A).
- FIG. 18C shows the mapping of cells onto a human fetal ovary reference atlas (Garcia-Alonso et al., 2022) and assignment of cell types based on the scRNA-seq analysis described in (FIG. 18A).
- FIG. 18D shows the proportion of somatic cell types, germ cells, DAZL+ cells, and DDX4+ cells in ovaroids from each day based on the scRNA-seq analysis described in (FIG. 18A).
- FIG. 19A shows denuded oocytes from standard of care.
- FIG. 19B shows COCs from minimal stimulation.
- FIG. 19C shows OSC-IVM statistically significantly improves oocyte maturation rates.
- FIG. 20A shows morphological quality of oocytes grown in culture with OSCs-lVM.
- FIG. 20B shows the angle between the PB1 and the spindle of oocytes grown in culture with OSCs-lVM.
- FIG. 20C shows the high similarity of oocytes grown in culture with OSCs-lVM to in vivo Mil oocytes.
- FIG. 20D shows the high similarity of oocytes grown in culture with OSCs-lVM to in vivo Mil oocytes.
- FIG. 21A shows the oocyte degradation rate from a toxicity assessment of OSCs-lVM product.
- FIG. 21 B shows the fertilization and blastocysts generation of OSCs-lVM product.
- the term “about” refers to a value that is within 10% (10%, 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, 1%, or less) above or below the value being described.
- the phrase “about 50 mg” refers to a value between and including 45 mg and 55 mg.
- ART assisted reproductive technology
- oocytes female gametocytes
- ova gametes
- an oocyte retrieved from a subject undergoing an ART procedure may be matured in vitro using, e.g., co-culturing methodologies described herein.
- the ovum upon the formation of a mature oocyte (ovum), the ovum may be treated with one or more sperm cells so as to promote the formation of a zygote and, ultimately, an embryo.
- the embryo may then be transferred to the uterus of a female subject, for instance, using the compositions and methods in the art.
- ART procedures include in vitro fertilization (IVF) and intracytoplasmic sperm injection (ICSI) techniques described herein and known in the art.
- subject refers to an organism that receives treatment for a particular disease or condition as described herein.
- subjects and subjects include mammals, such as humans (e.g., a female human), receiving treatment for diseases or conditions that correspond to a reduced ovarian reserve or release of immature oocytes.
- controlled ovarian hyperstimulation refers to a procedure in which ovulation is induced in a subject, such as a human subject, prior to oocyte or ovum retrieval for use in embryo formation, for instance, by in vitro fertilization (IVF) or intracytoplasmic sperm injection (ICSI).
- Controlled ovarian hyperstimulation procedures may involve administration of follicle-stimulating hormone (FSH), human chorionic gonadotropin (hCG), and/or a gonadotropin-releasing hormone (GnRH) antagonist to the subject so as to promote follicular maturation.
- FSH follicle-stimulating hormone
- hCG human chorionic gonadotropin
- GnRH gonadotropin-releasing hormone
- Controlled ovarian hyperstimulation methods are known in the art and are described herein as they pertain to methods for inducing follicular maturation and ovulation in conjunction with assisted reproductive technology.
- the term “derived from” in the context of a cell derived from a subject refers to a cell, such as a mammalian ovum, that is either isolated from the subject or obtained from expansion, division, maturation, or manipulation (e.g., ex vivo expansion, division, maturation, or manipulation) of one or more cells isolated from the subject.
- an ovum is “derived from” a subject or an oocyte as described herein if the ovum is directly isolated from the subject or obtained from the maturation of an oocyte isolated from the subject, such as an oocyte isolated from the subject from about 1 day to about 5 days following the subject receiving ovarian hyperstimulation procedures (e.g., an oocyte isolated from the subject from about 2 days to about 4 days following ovarian hyperstimulation procedures).
- the term “dose” refers to the quantity of a therapeutic agent, such as a follicle stimulating agent described herein, that is administered to a subject for the treatment of a disorder or condition, such as to enhance oocyte maturation and/or release and promote retrieval and ex vivo maturation of viable oocytes.
- a therapeutic agent as described herein may be administered in a single dose or in multiple doses. In each case, the therapeutic agent may be administered using one or more unit dosage forms of the therapeutic agent. For instance, a single dose of 100 mg of a therapeutic agent may be administered using, e.g., two 50 mg unit dosage forms of the therapeutic agent.
- a single dose of 300 mg of a therapeutic agent may be administered using, e.g., six 50 mg unit dosage forms of the therapeutic agent or two 50 mg unit dosage forms of the therapeutic agent and one 200 mg unit dosage form of the therapeutic agent, among other combinations.
- a single dose of 900 mg of a therapeutic agent may be administered using, e.g., six 50 mg unit dosage forms of the therapeutic agent and three 200 mg unit dosage forms of the therapeutic agent or ten 50 mg unit dosage form of the therapeutic agent and two 200 mg unit dosage forms of the therapeutic agent, among other combinations.
- the term “follicular triggering period” refers to the timepoint for administering a follicular triggering agent.
- the timepoint for administering a follicular triggering agent i.e. , the follicular triggering period
- the timepoint for administering a follicular triggering agent to a female subject is on day 1 , day 2, or day 3 of her menstrual cycle, with preference for day 2 of her menstrual cycle.
- the timepoint for administering a follicular triggering agent is 4-6 days (e.g., 4 days, 5 days, or 6 days) after consuming the last oral contraception pill, with preference for 5 days following the dosing of her last oral contraception pill.
- FSH follicle-stimulating hormone
- FSH refers to a biologically active heterodimeric human fertility hormone capable of inducing ovulation in a subject.
- FSH may be purified from post-menopausal human urine or produced as a recombinant protein product.
- Exemplary recombinant FSH products include follitropin alfa (GONAL-F, Merck Serono/EMD Serono) and follitropin beta (PUREGON/FOLLISTIM, MSD/Scherig-Plough).
- hCG human chorionic gonadotropin
- LHCGR luteinizing hormone chorionic gonadotropin receptor
- hCG may be purified from the urine of pregnant women or produced as a recombinant protein product.
- exemplary recombinant hCG products include choriogonadotropin alfa (OVIDREL®, Merck Serono/EMD Serono).
- the term “in vitro fertilization” refers to a process in which an ovum, such as a human ovum, is contacted ex vivo with one or more sperm cells so as to promote fertilization of the ovum and zygote formation.
- the ovum can be derived from a subject, such as a human subject, undergoing various ARTs known in the art.
- one or more oocytes may be obtained from the subject following injection of follicular maturation stimulating agents for controlled ovarian hyperstimulation procedures, e.g., from about 1 day to about 5 days prior after injection of said agents (such as from about one day to about 4 days after injection of follicular maturation stimulating agents to the subject).
- the ovum may also be retrieved directly from the subject, for instance, by transvaginal ovum retrieval procedures known in the art.
- ICSI intracytoplasmic sperm injection
- a sperm cell is injected directly into an ovum, such as a human ovum, so as to promote fertilization of the ovum and zygote formation.
- the sperm cell may be injected into the ovum, for instance, by piercing the oolemma with a microinjector so as to deliver the sperm cell directly to the cytoplasm of the ovum.
- ovum and oocyte refer to a haploid female reproductive cell or gamete.
- ova may be produced ex vivo by maturation of one or more oocytes isolated from a subject undergoing ART.
- Ova may also be isolated directly from the subject, for example, by transvaginal ovum retrieval methods described herein or known in the art.
- Ovum or oocyte as used in this disclosure may refer to a plurality of oocytes.
- An oocyte may be in complex with surrounding cells such as a cumulus-oocyte complex (COC).
- COC cumulus-oocyte complex
- mature ova and “mature oocyte” refer to one or more ovum or oocyte in metaphase II (Mll)-stage of meiosis and typically has morphological or structural features consistent with metaphase II, such as a polar body and other features described herein.
- Mll metaphase II
- an immature oocyte refers to one or more ovum or oocyte that has not reached MH stage of meiosis.
- an immature oocyte may be an oocyte including germinal vesicle (GV)-stage and/or metaphase I (Ml)-stage oocytes as determined by morphological features and/or other indications known in the art.
- GV germinal vesicle
- Ml metaphase I
- Oocyte maturation refers to the process by which an immature oocyte developmentally transitions to a mature oocyte. Oocyte maturation occurs as immature oocytes undergo cell signaling events incurred by external and internal stimuli. External stimuli may be produced by neighboring cells or supporting cells described herein. Oocyte maturation may occur prior to the release of an oocyte and retrieval from a subject. Oocyte maturation may occur in vitro as a result of culturing methods and culture compositions described herein.
- an “induced pluripotent stem cell (iPSC)” such as a human iPSC (hiPSC) refers to one or more cells that are self-renewing in an undifferentiated state and can differentiate into any one type of differentiated cell types found in an organism.
- iPSCs can be derived from non-embryonic sources such as a somatic cell and can proliferate without limit.
- iPSCs can differentiate into each one of the three embryonic germ layers (i.e. , the endoderm, mesoderm, and ectoderm) and further cell types therein, depending on the induction of transcription factors and/or use of methods of gene editing known in the art.
- iPSCs can differentiate into a population of ovarian support cells, as described herein.
- the pluripotency or “stem-ness” of an iPSC may be verified by the expression of one or more pluripotent cell-specific markers including 0CT4, SSEA3, SSEA4, TRA1 -60, TRA1 -81 , NANOG, SOX2, and/or POU5F1 , among other pluripotent cell-specific markers known in the art and described herein.
- an “ovarian support cell” or “support cell” refers to one or more cells that promotes maturation of one or more oocytes.
- An OSC may be an ovarian granulosa cell (e.g., a type of granulosa cell described herein). Additionally or alternatively, an OSC may be an ovarian stroma cell (e.g., a type of stroma cell described herein).
- An OSC may form a cumulus-oocyte complex (COC) with an oocyte.
- COC cumulus-oocyte complex
- An OSC may be generated from an exogenous source, such as from induced pluripotent stem cells (iPSCs), e.g., human induced pluripotent stem cells (hiPSCs), as described herein.
- An OSC may be applied to a retrieved oocyte using in vitro cell culture methods and compositions described herein.
- An OSC may be a mixture of two or more cell types.
- An OSC may be a mixture of stroma cells and granulosa cells such that the mixture is approximately a 1 :1 population of stroma cells and granulosa cells.
- An OSC may be a mixture of stroma cells and granulosa cells such that one cell type is in higher relative abundance compared to one or more cell types such that the mixture is approximately a 2:1 population, a 3:1 population, a 4:1 population, a 5:1 population, among other possible population distributions.
- An OSC may be a mixture of stroma cells and granulosa cells such that one cell type is more abundant in the mixture (e.g., 90% stroma cells and 10% granulosa cells, 80% stroma cells and 20% granulosa cells, 70% stroma cells and 30% granulosa cells, 60% stroma cells and 40% granulosa cells, 40% stroma cells and 60% granulosa cells, 30% stroma cells and 70% granulosa cells, 20% stroma cells and 80% granulosa cells, or 10% stroma cells and 90% granulosa cells, among other possible distributions).
- an OSC may be a mixture of stroma cells and granulosa cells in combination with one or more additional cell types.
- an “ovarian stroma cell” or a “stroma cell” is a cumulus cell surrounding the oocyte to ensure healthy oocyte and subsequent embryo development.
- An ovarian stroma cell may form a COC with an oocyte.
- An ovarian stroma cell may express markers consistent with a stroma subtype such as nuclear receptor subfamily 2 group F member 2 (NR2F2), which can be detected by methods known in the art.
- An ovarian stroma cell may be a steroidogenic stroma cell.
- An ovarian stroma cell may be produced from differentiated hiPSCs as described herein.
- a “steroidogenic stroma cell” is a stroma cell that may produce one or more steroids such as estradiol, progesterone, or a combination thereof.
- One or more steroids may be produced in response to hormonal stimulation, such as by FSH, androstenedione, or a combination thereof.
- One or more steroids may be secreted.
- EGFR and ERBB1 are interchangeable terms for a gene or a biomarker expressed by a cell (e.g., an ovarian support cell; (e.g., a differentiated iPSC)).
- EGFR and ERBB1 are gene names of epidermal growth factor receptor (e.g., human epidermal growth factor receptor; NCBI Gene ID: 1956).
- Other names for the gene are known in the art and include ERRP, HER1 , mENA, PIG51 , and NISBD2.
- an “ovarian granulosa cell” or a “granulosa cell” is a cumulus cell surrounding the oocyte to ensure healthy oocyte and subsequent embryo development.
- An ovarian granulosa cell may form a COC with an oocyte.
- An ovarian granulosa cell may express markers consistent with a granulosa subtype such as FOXL2, CD82 and/or follicle-stimulating hormone receptor (FSHR), which can be detected by methods known in the art.
- An ovarian granulosa cell may be a steroidogenic granulosa cell.
- An ovarian granulosa cell may be produced from differentiated hiPSCs as described herein.
- a “steroidogenic granulosa cell” is a granulosa cell that may produce one or more steroids such as estradiol, progesterone, or a combination thereof.
- One or more steroids may be produced in response to hormonal stimulation, such as by FSH, androstenedione, or a combination thereof.
- One or more steroids may be secreted.
- biological sample may refer to a component of an in vitro cell culture system such as one or more isolated cells, a whole population of cells or a portion thereof, and/or cell culture media.
- a biological sample or a sample may refer to a specimen (e.g., blood, blood component (e.g., serum or plasma), urine, saliva, amniotic fluid, cerebrospinal fluid, tissue (e.g., placental or dermal), pancreatic fluid, chorionic villus sample, hair, oocyte, ovum, and/or cells isolated from a subject.
- a specimen e.g., blood, blood component (e.g., serum or plasma), urine, saliva, amniotic fluid, cerebrospinal fluid, tissue (e.g., placental or dermal), pancreatic fluid, chorionic villus sample, hair, oocyte, ovum, and/or cells isolated from a subject.
- the term "express” refers to one or more of the following events: (1 ) production of an RNA template from a DNA sequence (e.g., by transcription); (2) processing of an RNA transcript (e.g., by splicing, editing, 5' cap formation, and/or 3' end processing); (3) translation of an RNA into a polypeptide or protein; and (4) post-translational modification of a polypeptide or protein.
- a gene or a biomarker of interest in a sample can manifest, for example, by detecting: the quantity or concentration of mRNA encoding a corresponding protein (as assessed, e.g., using RNA detection procedures such as quantitative polymerase chain reaction (qPCR), reverse transcription PCR (RT-PCR), and RNA sequencing (RNA-seq) techniques, among other RNA detection methods known in the art), the quantity or concentration of a corresponding protein (as assessed, e.g., using protein detection methods described herein or known in the art, such as enzyme-linked immunosorbent assays (ELISA), immunofluorescence methods, Western blot, or mass spectrometry, among others), and/or the activity of a corresponding protein (e.g., in the case of an enzyme, as assessed using an enzymatic activity as
- RNA detection procedures such as quantitative polymerase chain reaction (qPCR), reverse transcription PCR (RT-PCR), and RNA sequencing (RNA-seq) techniques, among other RNA detection methods known in
- a control sample is a cell or population of cells that has not undergone one or more of the procedures that a sample of interest has undergone.
- Exemplary procedures include a reprogramming or differentiation method such as any one or more types of reprogramming or differentiation methods directed to an iPSC as described herein, an in vitro maturation method such as an in vitro maturation method directed to one or more oocytes as described herein, or an in vitro fertilization method such as an in vitro fertilization method described herein.
- a control sample is a cell or a population of cells that is representative of a particular cell type, such as, an established cell line from a manufacturer or an otherwise characterized cell type (e.g., an iPSC or an OSC).
- one or more cells are determined to express a gene or biomarker if the expression level is within an acceptable range as compared to the expression level of a control sample (e.g., within 20%, within 15%, within 10%, or within 5% of the expression level of a control sample).
- significant expression refers to an expression level relative to a cut-off value or threshold, such as, e.g., a cut-off value or threshold for an RNA-sequencing or flow cytometry method.
- a population of cells may be determined to express a gene or biomarker of interest if a significant portion of the population (e.g., about 50% of the population, about 60% of the population, about 70% of the population, about 80% of the population, about 90% of the population, about 95% of the population, or about 99% of the population) has significant expression of a gene or biomarker of interest by meeting or exceeding a particular cut-off or threshold.
- a significant portion of the population e.g., about 50% of the population, about 60% of the population, about 70% of the population, about 80% of the population, about 90% of the population, about 95% of the population, or about 99% of the population
- no significant expression of one or more target genes or biomarkers is observed.
- “no significant expression” or “no detectable expression” refers to an expression level that is below the limits of detection for a particular detection method (e.g., an RT-PCR or an ELISA) and/or an expression level that is less than about 95% (e.g., 95%, 96%, 97%, 98%, 99%, or less than 99%) relative to a suitable control, such as a particular cell type (e.g., an undifferentiated iPSC or a typical OSC such as an in vivo OSC).
- a suitable control such as a particular cell type (e.g., an undifferentiated iPSC or a typical OSC such as an in vivo OSC).
- no significant expression or “no detectable expression” refers to an expression level relative to a cut-off value or threshold, such as, e.g., a cut-off value or threshold for an RNA-sequencing or a flow cytometry method.
- No significant expression or no detectable expression may refer to the relative expression levels of a population of cells, in which a significant portion of the population (e.g., about 50% of the population, about 60% of the population, about 70% of the population, about 80% of the population, about 90% of the population, about 95% of the population, or about 99% of the population) does not have significant expression of a gene or biomarker of interest by having an expression level that is below a particular cut-off or threshold.
- the term “overexpress” refers to expression of a gene or a biomarker that is increased relative to a basal level of expression for a particular cell type (e.g., an iPSC).
- the expression of a gene or a biomarker may be increased by 5%, by 10%, by 15%, by 20%, by 25%, by 30%, by 35%, by 40%, by 45%, by 50%, by 55%, by 60%, by 65%, by 70%, by 75%, by 80%, by 85%, by 90%, by 95%, by 100%, or in some instances, greater than 100%, such as 125%, 150%, 175%, 200%, 225%, 250%, 275%, 300%, 325%, 350%, 375%, 400%, or greater than 400%.
- Overexpression of a gene or biomarker may be detected or measured by any suitable methods for detecting or measuring expression of a gene or a biomarker, such as genotyping methods, mRNA detection methods, or protein detection methods, such as methods described herein and known in the art.
- doxycycline-responsive transcription regulatory element refers to a nucleotide sequence such as a promoter that initiates transcription of a gene in the presence of doxycycline (e.g., an effective amount of doxycycline).
- oral contraceptive treatment refers to a hormonal method of treatment typically used to prevent pregnancy.
- Oral contraceptive treatment may block the release of oocytes from the ovaries and may contain hormones including estrogen and progestin.
- ovarian reserve refers to the number of oocytes in a subject’s ovaries and the quality of said oocytes.
- the ovarian reserve naturally declines with age and/or medical conditions described herein.
- Subjects with a diminished ovarian reserve may seek IVF or other ARTs to achieve a successful pregnancy.
- Levels of anti-Mullerian hormone (AMH), as described herein, may be indicative of a subject’s ovarian reserve.
- stimulation protocol refers to the process of administering to the subject one or more follicular triggering agents during a follicular triggering period.
- follicular triggering agent refers to a chemical or biological composition that stimulates release of oocytes from the ovaries during ovulation.
- Follicular triggering agents may include hormones such as human chorionic gonadotropin and follicle-stimulating hormone.
- iPSCs induced pluripotent stem cells
- iPSCs refer to artificial stem cells that derive from reprogrammed and otherwise manipulated harvested somatic cells. iPSCs may differentiate into other cell types including ovarian support cells or granulosa cells via methods known in the art and methods described herein.
- iPSCs may be human iPSCs (hiPSCs) or iPSCs from, e.g., other mammalian sources.
- Clomid or “clomiphene citrate” are interchangeable terms that refer to a nonsteroidal, ovulatory stimulant that is designated chemically as 2-[p-(2-chloro-1 ,2- diphenylvinyl)phenoxy]triethylamine citrate (1 :1 ) with a molecular formula of C26H28CINO • CeHsO? and a molecular weight of 598.01 g/mol.
- Clomiphene citrate is a mixture of two geometric isomers in the cis (zuclomiphene) and trans (enclomiphene) forms, in which the mixture contains between 30% and 50% (e.g., about 25%, about 30%, about 35%, about 40%, about 45%, about 50%, or about 55%) of the cisisomer (zuclomiphene).
- cell culture refers to laboratory methods that enable in vitro cell proliferation and/or cultivation of prokaryotic or eukaryotic cell types.
- matrix in the context of cell culture or methods of in vitro cell cultivation refers to a coating such as a substrate or a membrane on a surface of a cell culture receptacle (e.g., a well plate or a Petri dish) that facilitates immobilization or adhesion of a cell to the surface.
- a suitable matrix may be a protein such as a glycoprotein, a proteoglycan, or a combination thereof.
- a suitable matrix may derive from plants or animal products or may be synthetic (e.g., a recombinant protein or a polymer).
- a suitable matrix may be an extracellular matrix protein, a particular isoform thereof, or a purified or partially purified fraction that is enriched for species based on their molecular weight.
- a suitable matrix may comprise a mixture of components.
- Exemplary matrices include alginate, laminin (e.g., laminin-111 , laminin-21 1 , laminin-121 , laminin-221 , laminin-332, laminin-31 1 , laminin-321 , laminin- 41 1 , laminin-421 , laminin-51 1 , laminin-521 , and/or laminin-213), vitronectin (e.g., type I, type II, and/or type III), fibronectin (e.g., type I, type II, and/or type III), collagen (e.g., type I, type II, type III, type IV, type V, type VI, type VII, type VIII, type IX, type X, type XI
- the term “encapsulate” or variations thereof refer to a coating of a cell or a plurality of cells in an in vitro culture system, optionally wherein the cell or plurality of cells is delivered (e.g., implanted, dispensed, or deposited) to a cellular niche (e.g., a tissue or an organ of an organism). Encapsulating a cell or a plurality of cells may increase the efficacy of delivery.
- a suitable reagent for encapsulation may be a protein such as a glycoprotein, a proteoglycan, or a combination thereof.
- a reagent for encapsulation may derive from plants or animal products or may be synthetic (e.g., a recombinant protein or a polymer).
- a suitable reagent for encapsulation may be an extracellular matrix protein, a particular isoform thereof, or a purified or partially purified fraction that is enriched for species based on their molecular weight.
- a suitable reagent for encapsulation comprise a mixture of components.
- Exemplary encapsulation agents include alginate, laminin (e.g., laminin-1 1 1 , laminin-21 1 , laminin-121 , laminin-221 , laminin-332, laminin-31 1 , laminin-321 , laminin-41 1 , laminin-421 , laminin-51 1 , laminin-521 , and/or laminin-213), vitronectin (e.g., type I, type II, and/or type III), fibronectin (e.g., type I, type II, and/or type III), collagen (e.g., type I, type II, type III, type IV, type V, type VI, type VII, type VIII, type IX, type X, type XI, type XII, type XIII, type XIV, type XV, type XVI, type XVII, type XVIII, type XIX, type XX, type XXI, type
- Selection of a reagent for encapsulation may depend on cell type or relative cellular composition (e.g., lipid content, surface protein expression; e.g., relative abundance of one or more adhesion receptors) of the cells to be encapsulated or of the cells in a niche that will receive the one or more encapsulated cells.
- cell type or relative cellular composition e.g., lipid content, surface protein expression; e.g., relative abundance of one or more adhesion receptors
- Wnt/p-catenin activator refers to any agent (e.g., a nucleic acid, a protein, a lipid, a small molecule, or a combination thereof) that ultimately upregulates, stimulates, initiates, drives, or induces activation of the Wnt/p-catenin signaling pathway.
- a Wnt/p-catenin activator may directly contact a positive regulator of the pathway to upregulate said pathway.
- a Wnt/p-catenin activator may directly contact a negative regulator of the pathway to upregulate said pathway (i.e. , act as an inhibitor of an inhibitor of the Wnt/p-catenin pathway).
- Regulators of the Wnt/p-catenin signaling pathway are known in the art and can be found elsewhere such as, e.g., Nusse and Clevers, Cell. 169(6):985-999, 2017, hereby incorporated by reference.
- a Wnt/p-catenin activator is a Rho-associated protein kinase (ROCK) inhibitor, such as Y-27642 or an equivalent salt or derivative thereof, the structure of which is shown below:
- ROCK Rho-associated protein kinase
- a Wnt/p-catenin activator is a glycogen synthase kinase-3 inhibitor, such as CHIR099021 , or an equivalent salt or derivative thereof, the structure of which is shown below:
- co-culture refers to a type of cell culture method in which more than one cell type or cell populations are cultivated with some degree of contact between them. In a typical coculture system, two or more cell types may share artificial growth medium.
- adherent co-culture systems or “adherent cell culture” refer to a cell culture arrangement by which cells are attached to a surface for proper growth and proliferation.
- the terms “suspension co-culture systems” or “suspension cell culture” refer to a cell culture arrangement by which cells are cultivated via dispersion in a liquid medium for proper growth and proliferation.
- compositions and methods for use in assisted reproductive technology are directed to producing, engineering, and culturing one or more ovarian support cells (OSCs) (e.g., ovarian granulosa, ovarian stroma cells, or a combination thereof) and in vitro maturation of oocytes.
- OSCs ovarian support cells
- compositions and methods described herein facilitate the harvest and use of previously discarded oocytes for purposes of in vitro fertilization (IVF) by performing in vitro maturation of immature oocytes via co-culture with ovarian support cells (e.g., ovarian support cells derived from reprogrammed iPSCs).
- ovarian support cells e.g., ovarian support cells derived from reprogrammed iPSCs.
- the described in vitro maturation methods improve the ability to use these typically discarded immature oocytes in IVF procedures and may lead to a more cost-effective treatment strategy and reduced risk to a treated subject.
- the methods can reduce the risk of systemic ovarian overstimulation for subjects seeking IVF procedures by requiring fewer hormone injections and/or lower doses of injected hormones than present IVF treatment options.
- aspects of the present disclosure can be used to increase the overall pool of available healthy oocytes in women for use in IVF. Aspects of the present disclosure can also be used to significantly reduce hormone dosing in subjects during egg retrieval and improve oocyte quality in culture. This may greatly expand access to reproductive technology, make the duration of a single cycle significantly shorter and require fewer cycles overall to achieve pregnancy.
- the disclosure provides an engineered cell culture system.
- the engineered cell culture system comprises a population of engineered ovarian supporting cells (OSCs).
- OSCs engineered ovarian supporting cells
- the subject matter described herein relates to a method of differentiating a population of induced pluripotent stem cells (iPSCs) such as human iPSCs (hiPSCs) to a population of OSCs.
- iPSCs induced pluripotent stem cells
- hiPSCs human iPSCs
- the subject matter described herein relates to in vitro maturation (IVM) methods.
- the engineered cell culture system promotes the maturation of one or more oocytes.
- the subject matter described herein relates to in vitro fertilization (IVF) methods.
- the one or more mature oocytes are utilized in an ART or IVF method.
- the engineered cell culture system is an engineered cell co-culture system.
- the co-cultured cells are in a suspension culture.
- the co-cultured cells are in an adherent culture.
- any one or more OSCs utilized in the methods described herein may be created from iPSCs using transcription factor (TF)-directed protocols.
- the iPSCs are mammalian iPSCs.
- the iPSCs are human iPSCs (hiPSCs).
- hiPSCs may be transformed with any one or more plasmids encoding one or more transcription factors.
- the differentiation of hiPSCs to OSCs is driven by overexpression of one or more transcription factors.
- the one or more TFs comprise FOXL2, NR5A1 , RUNX2, GATA4, or any combination thereof.
- undifferentiated hiPSCs are reprogrammed using a transposase method (e.g., a piggyBac transposase method) to carry specific inducible transcription factors (e.g., FOXL2, NR5A1 , RUNX2, and/or GATA4).
- hiPSCs may be transformed via electroporation, liposome-mediated transformation, viral-mediated gene transfer, among other cell transformation methodologies known in the art.
- gene expression of desired transcription factors may be induced in a doxycycline-dependent manner.
- a plasmid or expression vector used for reprogramming hiPSCs may have a reporter gene such as a fluorescent protein.
- hiPSCs may differentiate into stroma cells with induced expression of transcription factors including GATA4, FOXL2, or a combination thereof. In some embodiments, hiPSCs may differentiate into granulosa with induced expression of transcription factors including FOXL2, NR5A1 , GATA4, RUNX1 , RUNX2, or a combination thereof. In addition to a combination of one or more transcription factors of FOXL2, NR5A1 , GATA4, RUNX1 , and/or RUNX2, hiPSCs may differentiate into granulosa via expression of KLF2, TCF21 , NR2F2, or a combination thereof.
- the OSCs utilized in the methods described herein may be produced using Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) technology.
- CRISPR is programmable technology that targets specific stretches of genetic code to edit DNA at precise locations.
- CRISPR technology may include CRISPR-CAS 9.
- Cas9 or "CRISPR-associated protein 9" is an enzyme that uses CRISPR sequences as a guide to recognize and cleave specific strands of DNA that are complementary to the CRISPR sequence, allowing for the insertion of exogenous nucleic acids into a cell’s genome.
- CRISPR-based gene editing techniques can be used to introduce into an iPSC genome, one or more genes encoding for factors that induce differentiation into OSCs (e.g., granulosa cells or stroma cells). These factors include, e.g., FOXL2, NR5A1 , GATA4, RUNX1 , and RUNX2.
- CRISPR systems include those that utilize a Cas9 enzyme.
- Cas9 enzymes, together with CRISPR sequences, form the basis of a technology known as CRISPR-Cas9 that can be used to edit genes within organisms.
- CRISPR technology may include Class 1 CRISPR systems including type I (cas3), type III (cas10), and type IV and 12 subtypes.
- CRISPR technology may include Class 2 CRISPR systems including type II (cas9), type V (cas12), type VI (cas13), and 9 subtypes.
- CRISPR technology may involve CRISPR-Cas design tools which are computer software platforms and bioinformatics tools used to facilitate the design of guide RNAs (gRNAs) for use with the CRISPR/Cas gene editing system.
- gRNAs guide RNAs
- CRISPR-Cas design tools may include: CRISPRon, CRISPRoff, Invitrogen TrueDesign Genome Editor, Breaking-Cas, Cas-OFFinder, CASTING, CRISPy, CCTop, CHOPCHOP, CRISPOR, sgRNA Designer, Synthego Design Tool, and the like.
- CRISPR technology may also be used as a diagnostic tool.
- CRISPR-based diagnostics may be coupled to enzymatic processes, such as SHERLOCK-based Profiling of in vitro Transcription (SPRINT). SPRINT can be used to detect a variety of substances, such as metabolites in subject samples or contaminants in environmental samples, with high throughput or with portable point-of-care devices.
- overexpression of the one or more TFs is driven by any suitable induction agent known in the art.
- the induction lasts for 1 day, 2 days, 3, days, 4 days, 5 days or longer than 5 days.
- transcription factors are constitutively expressed.
- a plasmid or expression vector used for reprogramming hiPSCs may have a reporter gene such as a fluorescent protein.
- the cells e.g., hiPSCs
- cells e.g., hiPSCs
- cells e.g., hiPSCs
- an agent that inhibits a serinethreonine protein kinase such as Rho-associated protein kinase (ROCK) (e.g., a small molecule ROCK inhibitor; e.g., Y-27642) or glycogen synthase kinase-3 (GSK3) (e.g., a GSK3 inhibitor; e.g., CHIR099021 ).
- ROCK Rho-associated protein kinase
- GSK3 glycogen synthase kinase-3
- the resulting OSCs comprise a population of cells with functional and biological similarity to human granulosa cells (cells that express FOXL2 and AMHR2, among other granulosa biomarkers known in the art and described herein). In some embodiments, the resulting OSCs comprise a population of cells with functional and biological similarity to ovarian stroma cells (cells that express NR2F2, among other stroma cell biomarkers known in the art and described herein). In some embodiments, the resulting OSCs comprise a population of cells comprising both granulosa and stroma cells.
- a population of OSCs primarily comprises granulosa cells such that the population of OSCs comprise more than 50%, more than 60% granulosa cells, more than 70% granulosa cells, more than 80% granulosa cells, more than 90% granulosa cells, or more than 95% granulosa cells.
- Reprogramming of hiPSCs to granulosa may be determined by genotyping methods described herein.
- hiPSCs to OSCs may be determined by relative expression of biomarkers typical of a granulosa cell type including FOXL2, AMHR2, CD82, FSHR, IGFBP7, KRT19, STAR, WNT4, or a combination thereof among other granulosa cell biomarkers known in the art.
- hiPSCs that are differentiated to OSCs may be categorized into one or more clusters based on transcriptome profiling.
- differentiation of hiPSCs to OSCs may be determined by relative expression of biomarkers or genes, such as genes associated with cell adherence, chemotaxis, growth factors and/or growth factor receptors, steroids and/or steroid receptors, or a combination thereof, among other genes or biomarkers associated with one or more types of OSCs.
- biomarkers typical of an OSC e.g., a granulosa cell
- biomarkers typical of an OSC may further include FOXO1 , CDH1 , CYP19A1 , RARRES2, NOTCH2, NRG1 , BMPR1 B, EGFR (ERBB1 ), and/or ERBB4.
- biomarkers typical of an OSC may further include RARRES2, NOTCH2, NOTCH3, ID3, and/or BMPR2.
- biomarkers typical of an OSC may further include CDH2 and/or NOTCH2, with no significant expression of RARRES2.
- the functional screening of individual clones identifies a stable line harboring the optimal balance of expression of each transcription factor or biomarker.
- application of doxycycline to the cells or cell culture maintains activation of one or more TFs in the OSCs (e.g., for doxycycline-dependent induction).
- RNA-seq RNA-sequencing
- RT-PCR real-time reverse transcription polymerase chain reaction
- qPCR quantitative PCR
- RT-qPCR Northern blot analysis
- mass spectrometry mass spectrometry and proteomic modalities
- Western blot analysis enzyme-linked immunosorbent assay (ELISA)
- ELISA enzyme-linked immunosorbent assay
- reprogramming of hiPSCs to OSCs yield one or more OSCs that share strong gene expression similarity to in vivo granulosa cells (e.g., cells that express FOXL2 and AMHR2)
- the OSCs share strong gene expression similarity to in vivo stroma cells (e.g., cells that express NR2F2).
- the OSCs recapitulate folliculogenesis progression in vitro through follicle formation.
- reprogramming of hiPSCs to one or more OSCs may be determined by production of growth factors and/or hormones that may adequately support in vitro maturation of retrieved oocyte via paracrine and juxtacrine cell signaling.
- the OSCs produce one or more growth factors including insulin-like growth factor (IGF), stem cell factor (SCF), epidermal growth factor (EGF), leukemia inhibitory factor (LIF), vascular endothelial growth factor (VEGF), bone morphogenetic proteins (BMPs), C-type natriuretic peptide (CNP), or any combination thereof.
- the one or more growth factors are secreted from the OSCs.
- the OSCs are steroidogenic and produce hormones including estradiol and/or progesterone.
- the OSCs are steroidogenic in the presence of an exogenously supplied reagent.
- the OSCs such as granulosa cells produce estradiol and/or progesterone upon stimulation of androstenedione and FSH or forskolin.
- secretion of estradiol and/or progesterone may be detected or measured by one or more protein detection methods known in the art.
- application of doxycycline to the OSCs maintains cell identity and drives steroidogenic activity.
- doxycycline is applied to the OSCs or OSC media upon thawing and seeding OSCs derived from reprogrammed iPSCs after cryopreservation and frozen storage (e.g., for doxycycline-dependent induction).
- OSCs derived from iPSCs may be provided as a composition further containing a cell culture media.
- Said OSCs or precursors may be cultivated in a cell culture media.
- the engineered OSCs can be added to a commercially available reproductive media (e.g., IVF, IVM, (e.g., MEDICULT IVM® media), or LAG media).
- cell culture media comprises DMEM/F12 supplemented with Knockout Serum Replacement (KSR).
- the cell culture media comprises L-glutamine analogs such as, e.g., GLUTAMAXTM (GIBCOTM, Thermo Fisher Scientific, Waltham, MA), optionally wherein the GLUTAMAXTM has been adapted to use animal origin-free reagents.
- an embryology lab procures a suitable IVF cell culture media.
- the cell culture media comprises Medicult IVM media.
- an embryology lab procures a suitable cell culture plate.
- the cell culture plate is a GPS Universal dish.
- an embryology lab procures an ART-grade mineral oil.
- the co-culture is achieved by preparation of an IVM media.
- the IVM media comprises a base medium formulation.
- the base medium formulation comprises MEDICULT IVM® media.
- the hiPSCs and/or the resulting OSCs described herein are cultured on a matrix or encapsulated during induction, culturing, or co-culturing with an oocyte.
- the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising alginate.
- the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising laminin.
- the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising laminin-521 .
- the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising vitronectin. In some embodiments, the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising collagen. In some embodiments, the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising chitosan. In some embodiments, the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising hyaluronic acid.
- the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in a matrix comprising dextran hydrogel. In some embodiments, the hiPSCs and/or the OSCs are cultured on a matrix or encapsulated in matrix comprising a MATRIG EL® matrix.
- the cell culture media is supplemented.
- the cell culture media may be supplemented with human serum albumin (HSA) (e.g., at about 5-15 mg/mL, e.g., 10 mg/mL), follicle stimulating hormone (FSH) (e.g., at about 70-80 mIU/mL, e.g., 75 mIU/mL), human chorionic gonadotropin (hCG) (e.g., at about 95-105 mIU/mL, e.g., 100 mIU/mL), Androstenedione (e.g., at about 495-505 ng/mL, e.g., 500 ng/mL), Doxycycline (e.g., 0.5-1 .5 pg/mL, e.g., 1 pg/mL) and other compounds such as hyaluronidase and/or dPBS.
- HSA human serum albumin
- FSH follicle
- one or more supplemented proteins are recombinant proteins.
- the cell culture media is supplemented with an agent that that activates Wnt/p-catenin signaling, such as, e.g., a ROCK inhibitor or a GSK3 inhibitor.
- the supplemented cell culture media forms an in vitro maturation (IVM) media.
- IVM in vitro maturation
- the IVM media is utilized by placement of about 100 pL of the media into the suitable cell culture dish, with a mineral oil overlay the day before oocyte retrieval from a subject.
- the engineered OSCs are thawed.
- the thawed engineered OSCs are centrifuged.
- the engineered OSCs are washed with IVM media.
- the engineered OSCs are seeded to a cell culture droplet.
- the engineered OSCs are seeded at a final concentration of about 1 ,000 cells per 1 pl (e.g., about 500-1 ,000 cells/pL, about 700-1 ,000 cells/pL, about 1 ,000-1 ,200 cells/pL, about 1 ,000-1 ,500 cells/pL, or about 1 ,000-2,000 cells/pL).
- a final concentration of about 1 ,000 cells per 1 pl e.g., about 500-1 ,000 cells/pL, about 700-1 ,000 cells/pL, about 1 ,000-1 ,200 cells/pL, about 1 ,000-1 ,500 cells/pL, or about 1 ,000-2,000 cells/pL.
- one or more OSCs described herein may be produced in multiple batches.
- the OSCs may be frozen and thawed prior to co-culture methods.
- the OSCs are freshly reprogrammed from a population of iPSCs prior to an in vitro maturation method.
- the OSCs may be seeded and equilibrated for 2-8 hours (e.g., 2-3 hours, 2-4 hours, 3-4 hours, 4-6 hours, 5-7 hours, 6-8 hours; e.g., 2 hours, 3 hours, 4 hours, 5 hours, 6 hours, 7 hours, 8 hours) before the addition of oocytes for in vitro maturation.
- the OSCs may be seeded and equilibrated for about 25-90 minutes (e.g., about 25 minutes, about 30 minutes, about 35 minutes, about 40 minutes, about 45 minutes, about 50 minutes, about 55 minutes, about 60 minutes, about 65 minutes, about 70 minutes, about 75 minutes, about 80 minutes, about 85 minutes, or about 90 minutes).
- 25-90 minutes e.g., about 25 minutes, about 30 minutes, about 35 minutes, about 40 minutes, about 45 minutes, about 50 minutes, about 55 minutes, about 60 minutes, about 65 minutes, about 70 minutes, about 75 minutes, about 80 minutes, about 85 minutes, or about 90 minutes.
- a subject may donate hiPSCs.
- hiPSCs donation may follow an oocyte retrieval process as discussed herein.
- a subject participating in hiPSCs donation may be different, or the same, from the subject from which the oocyte was retrieved.
- a hiPSC donor may undergo a stimulation protocol as disclosed herein.
- Select hiPSC clones may be expanded to generate an intermediate cell bank.
- Select hiPSC clones may be expanded and fully differentiated for immediate use.
- the hiPSCs e.g., undifferentiated hiPSCs; e.g., intermediate cell banks
- the engineered OSCs described herein are provided in a cryovial.
- the cryovial is composed of -125,000 cells (e.g., hiPSCs or OSCs).
- the hiPSCs or the engineered OSCs are suspended in a cryoprotectant solution.
- the cryoprotectant solution comprises CryoStor CS10.
- the cryovial is a plastic vial.
- the cryovial is an internal thread liquid nitrogen-suited plastic vial.
- the hiPSCs or the engineered OSCs are provided in one or more aggregates.
- the hiPSCs or the engineered OSCs are provided in one or more single cell suspensions.
- the hiPSCs or the engineered OSCs are prepared and then frozen or cryopreserved for later use. Cryopreservation or freezing methods may include using a cryoprotective agent such as dimethyl sulfoxide and/or any other freezing method known in the art.
- the hiPSCs or the engineered OSCs are stored in liquid nitrogen.
- the hiPSCs or the engineered OSCs are stored in liquid nitrogen until use.
- cryopreserved undifferentiated hiPSCs e.g., intermediate cell banks
- Undifferentiated hiPSCs e.g., intermediate cell banks
- the engineered OSCs are stored in liquid nitrogen until use for IVM methods and applications.
- frozen cells are submitted to different sets of batch release assays, in which cells undergo one or more tests to determine cell quality.
- one or more aliquots of frozen cells undergo a panel of tests to determine cell count and/or viability upon thawing, to verify genetic stability, to verify genotype, to confirm sterility, or a combination thereof.
- One or more aliquots of undifferentiated cells e.g., undifferentiated hiPSCs; e.g., an intermediate cell bank
- may further undergo a panel of tests to measure the presence and/or relative abundance of one or more pluripotency markers e.g., NANOG, POU5F1 , SOX2, OCT4.
- One or more aliquots of one or more OSC populations may undergo a panel of tests to measure the presence and/or relative abundance of a marker associated with one or more types of OSCs (e.g., a granulosa or a stroma cell) or the potency of secreted proteins or steroids (e.g., estradiol and/or progesterone production).
- a marker associated with one or more types of OSCs e.g., a granulosa or a stroma cell
- the potency of secreted proteins or steroids e.g., estradiol and/or progesterone production.
- one or more aliquots of frozen cells undergo tests to determine risks of embryo toxicity (e.g., the presence of one or more chemicals or agents that may disrupt normal growth, development, or genetic differentiation of an embryo).
- the one or more oocytes are human oocytes. In some embodiments, the one or more oocytes are mammalian oocytes. In some embodiments, the one or more oocytes are mouse oocytes. In some embodiments, the one or more oocytes are rat oocytes. In some embodiments, the one or more oocytes are monkey oocytes. In some embodiments, the one or more oocytes are rhesus macaque oocytes. In some embodiments, the one or more oocytes is obtained from conventional stimulation.
- the engineered OSCs promote the maturation of one or more oocytes outside of the body (i.e. , in vitro maturation (IVM)) by forming a cumulus-oocyte-complex (COC) with one or more oocytes.
- the one or more oocytes may be evaluated at any point during IVM based on oocyte scoring, as described in Section I l(C)(i).
- the engineered OSCs widen access to in vitro fertilization (IVF) and oocyte freezing by offering a more cost-effective, more efficient, and less invasive methodology for subjects seeking fertility treatments or an ART.
- the engineered OSCs promote IVM of one or more oocytes, as describe in further detail in Section II.
- the engineered OSCs do not have any continuing effect (e.g., biological or developmental effect) on the one or more mature oocytes following maturation.
- the engineered OSCs are physically separated from the one or more mature oocytes after the IVM and are not present in a sample utilized in a further step of an IVF procedure (e.g., embryo formation and/or embryo implantation).
- the one or more mature oocytes are utilized for subsequent IVF procedures including, but not limited to, embryo formation and embryo implantation.
- the engineered OSCs are not separated from the one or more matured oocytes and have no biological or developmental impact on a developing embryo.
- the methods described herein may be indicated for a subject who desires to increase the number of usable oocytes from any standard ART that utilizes controlled ovarian hyperstimulation (COH).
- COH controlled ovarian hyperstimulation
- the increased number of usable oocytes can result from co-culturing immature oocytes with one or more OSCs (e.g., one or more reprogrammed OSCs as described herein) to promote maturation of the immature oocytes that are commonly obtained in typical COH and oocyte retrieval procedures.
- Current standard of care is to discard retrieved immature oocytes.
- the OSCs described herein can promote maturation of immature oocytes, thus increasing the number of mature and usable oocytes from a population of retrieved oocytes.
- the methods described herein may be indicated for a subject seeking assisted reproductive technology procedures but may have limited access due to prohibitively high costs and/or risks associated with traditional methods of ovarian stimulation for oocyte retrieval (e.g., risks of ovarian hyperstimulation syndrome (OHSS)).
- Traditional methods typically require administering gonadotropins to a subject for ovarian stimulation and retrieval of mature oocytes. Delivery of administered gonadotropins is typically inefficient and requires high concentrations of gonadotropins to ensure that sufficient levels of gonadotropins are delivered to the ovarian follicle for oocyte maturation and release following systemic injection.
- IVM methods described herein By performing IVM methods described herein, reduced quantities of gonadotropin can be administered for oocyte retrieval, thereby providing a method that circumvents the costly and potentially dangerous side effects associated with systemic administration of high levels of gonadotropins.
- Immature oocytes can be retrieved, exposed to conditions that lead to optimized maturation ex vivo, and the resulting mature oocytes can be used for subsequent fertilization, embryo development, blastocyst formation, implantation, and gestation to ultimately become healthy offspring.
- a subject is a female with a low oocyte retrieval number or a subject with many immature oocytes.
- a subject may be between 20 and 45 years old, and a subject is typically 35 years of age or older.
- a subject may have a reduced ovarian reserve due to advancing age and/or a genetic or medical condition (e.g., polycystic ovarian syndrome (PCOS)) that leads to a reduced ovarian reserve.
- PCOS polycystic ovarian syndrome
- a subject may have an ovarian reserve of 20 or fewer oocytes such that a subject has 1 to 5 oocytes, 4 to 10 oocytes, 8 to 16 oocytes, or 15 to 20 oocytes, e.g., the subject has 1 oocyte, 2 oocytes, 3 oocytes, 4 oocytes, 5 oocytes, 6 oocytes, 7 oocytes, 8 oocytes, 9 oocytes, 10 oocytes, 11 oocytes, 12 oocytes, 13 oocytes, 14 oocytes, 15 oocytes, 16 oocytes, 17 oocytes, 18 oocytes, 19 oocytes, or 20 oocytes.
- a subject may have anti-Mullerian hormone (AMH) levels that are consistent with reduced ovarian reserve.
- a subject may have their AMH levels measured by a blood test and other methods known in the art.
- a subject may have AMH levels between 1 and 6 ng/mL (e.g., 1 -2 ng/mL, 2-4 ng/mL, or 4-6 ng/mL; e.g., 1 ng/mL, 2 ng/mL, 3 ng/mL, 4 ng/mL, 5 ng/mL, or 6 ng/mL).
- a subject may have measured estradiol levels between 20 and 50 pg/mL (e.g., 20-30 pg/mL, 25-35 pg/mL, 30-40 pg/mL, 35- 45 pg/mL, or 40-50 pg/mL; e.g., 20 pg/mL, 21 pg/mL, 22 pg/mL, 23 pg/mL, 24 pg/mL, 25 pg/mL, 30 pg/mL, 35 pg/mL, 40 pg/mL, 45 pg/mL, or 50 pg/mL).
- 20 pg/mL e.g., 20-30 pg/mL, 25-35 pg/mL, 30-40 pg/mL, 35- 45 pg/mL, or 40-50 pg/mL
- 20 pg/mL e.g., 20-30 pg/mL
- a physician or skilled practitioner may evaluate a subject for the methods of stimulating oocyte release by taking a biological sample from the subject.
- a biological sample may include a laboratory specimen held by a biorepository for research.
- a biological sample may include bodily fluids including blood, saliva, urine, semen (seminal fluid), vaginal secretions, cerebrospinal fluid (CSF), synovial fluid, pleural fluid (pleural lavage), pericardial fluid, peritoneal fluid, amniotic fluid, saliva, nasal fluid, optic fluid, gastric fluid, breast milk, cell culture supernatants, and the like.
- a biological sample may include a medical diagnosis, user input describing how a user is feeling and/or a symptomatic complaint, information collected from a wearable device pertaining to a user and the like.
- a biological sample may include information obtained from a visit with a medical professional such as a health history.
- a biological sample may include information such as data collected from a wearable device worn by a user and designed to collect information relating to a user’s sleep patterns, exercise patterns, and the like.
- a biological sample may be collected on the second day of a user’s menstrual cycle to evaluate one or more hormone levels.
- the biological sample may be utilized to determine markers of a subject’s ovarian reserve that may be measured by a subject’s AMH levels and/or other hormone levels or other indications.
- AMH levels of 1 ng/mL or less may be used to indicate a low ovarian reserve.
- a subject with a low ovarian reserve may have measured AMH levels of 1 .0 ng/mL, 0.9 ng/mL, 0.8 ng/mL, 0.7 ng/mL, 0.6 ng/mL, 0.5 ng/mL, 0.4 ng/mL, 0.3 ng/mL, 0.2 ng/mL, or 0.1 ng/mL.
- Other biological samples that may be utilized to determine one or more markers of a subject’s overall health include without limitation menstrual cycle progression, and/or monitor circulating hormone levels such as estradiol (E2), luteinizing hormone (LH), follicle-stimulating hormone (FSH), progesterone (P4), estrone (E1 ), estriol (E3), testosterone, androgens, dehydroepiandrosterone (DHEA), triiodothyronine (T3), tetraiodothyronine (T4), calcitonin, melatonin, insulin, cortisol, human growth hormone (HGH), adrenaline levels, and other hormones.
- E2 estradiol
- LH luteinizing hormone
- FSH follicle-stimulating hormone
- P4 progesterone
- E1 estrone
- E3 estriol
- testosterone androgens
- DHEA dehydroepiandrosterone
- biological sample data taken from a subject includes at least an oocyte.
- biological sample data is data that provides a characterization of the biological, genetic, biochemical and/or physiological properties, compositions, or activities of biological samples.
- an oocyte may be an immature oocyte.
- An “immature oocyte” as used in this disclosure is a one or more immature reproductive cells originating in the ovaries.
- an immature oocyte may be an oocyte including GV and/or Ml oocytes.
- an immature oocyte may be a plurality of oocytes.
- An immature oocyte may be immature cumulus-oocyte complexes (COCs) taken from the subject.
- COCs cumulus-oocyte complexes
- a “cumulus-oocyte complex” is an oocyte surrounded by specialized granulosa cells.
- a ’’specialized granulosa cell is a cumulus cell surrounding the oocyte to ensure healthy oocyte and embryo development.
- the immature oocyte may contain an oocyte wherein the specialized granulosa cell is added to mature the oocyte in a cell culture (e.g., a co-culture) and thus create a COC.
- the biological sample may be extracted from the user through an extraction device.
- An “extraction device” is a device and/or tool capable of obtaining, recording and/or ascertaining a measurement associated with a sample.
- the extraction device may include a needle, syringe, vial, lancet, Evacuated Collection Tubes (ECT), tourniquet, vacuum extraction tube systems, any combination thereof and the like.
- the extraction device may comprise a butterfly needle set.
- Data from a biological sample may include measurements, for example, of serum calcium, phosphate, electrolytes, blood urea nitrogen and creatinine, uric acid, and the like.
- biological sample information of a subject may be obtained from an ultrasound.
- An “ultrasound,” as used in this disclosure, is any procedure that utilizes sound waves to generate one or more images of a user’s body.
- an ultrasound may be utilized to obtain an image of a subject’s reproductive organs and/or tissues.
- an ultrasound may be performed at a particular time of a subject’s menstrual cycle.
- a subject may receive an ultrasound on day 2 of her cycle and this may be utilized to determine follicle size and/or follicle count. Selection of a stimulation protocol and/or adjustment to a stimulation protocol may be made utilizing this information.
- a subject with an ultrasound that shows PCOS may have a dose adjustment made to one or more medications received and/or utilized during a stimulation protocol.
- the length of her stimulation protocol may be modified based on her PCOS diagnosis.
- an ultrasound may be repeated one or more times throughout a subject’s stimulation protocol, and information obtained may be utilized to adjust her stimulation protocol in real time.
- a physician or skilled practitioner may determine the stimulation protocol of oocyte release directed to a subject using the described biological parameters.
- biological parameters include hormone levels (e.g., baseline hormone levels and/or hormone levels due to use of contraceptives), subject anatomy (e.g., follicle size, follicle count, ovarian morphology, and/or uterine morphology), among other biological parameters known to a skilled practitioner.
- hormone levels e.g., baseline hormone levels and/or hormone levels due to use of contraceptives
- subject anatomy e.g., follicle size, follicle count, ovarian morphology, and/or uterine morphology
- a skilled practitioner may administer a stimulation protocol with any one or a combination of triggering agents, or compositions directed to stimulate follicular maturation and oocyte release, described herein.
- Hormone levels or concentrations of other relevant compounds of the biological sample may include estradiol (E2), luteinizing hormone (LH), follicle-stimulating hormone (FSH), progesterone (P4), estrone (E1 ), estriol (E3), testosterone, androgens, dehydroepiandrosterone (DHEA), triiodothyronine (T3), tetraiodothyronine (T4), calcitonin, melatonin, insulin, cortisol, human growth hormone (HGH), adrenaline levels and the like.
- the measurement of hormone levels may be based on blood analysis of the biological sample.
- blood analysis may include plasma hormone analysis techniques.
- measurement of hormone levels may be based on saliva hormone testing techniques. Measurement of hormone levels may be based on other forms of analysis such as hair, urine, and any other form of biological samples described throughout this disclosure.
- a subject may have a baseline serum level of estradiol from about 30 pg/mL to about 60 pg/mL (e.g., from about 30 pg/mL to about 45 pg/mL, from about 40 pg/mL to about 55 pg/mL, or from about 45 pg/mL to about 60 pg/mL; e.g., about 30 pg/mL, about 35 pg/mL, about 40 pg/mL, about 45 pg/mL, about 50 pg/mL, about 55 pg/mL, or about 60 pg/mL) prior to the follicular triggering period.
- a subject may have a baseline serum level of progesterone from about 0.5 ng/mL to about 2.5 ng/mL (e.g., from about 0.5 ng/mL to about 1 .0 ng/mL, from about 1 .0 ng/mL to about 1 .5 ng/mL, from about 1 .5 ng/mL to about 2.0 ng/mL, or from about 2.0 ng/mL to about 2.5 ng/mL; e.g., about 1 .0 ng/mL, about 1 .5 ng/mL, about 2.0 ng/mL, or about 2.5 ng/mL) prior to the follicular triggering period.
- a baseline serum level of progesterone from about 0.5 ng/mL to about 2.5 ng/mL (e.g., from about 0.5 ng/mL to about 1 .0 ng/mL, from about 1 .0 ng/mL to about 1 .5 ng/mL,
- a subject’s contraception may affect assignment of a stimulation protocol.
- Consideration for contraception may aid in determining the follicular triggering period in the woman’s menstrual cycle.
- a subject who is not using any form of contraception may begin her stimulation protocol with recombinant follicle stimulating hormone (rFSH) between the first and third day of her menstrual cycle, with preference for the second day of her menstrual cycle.
- rFSH recombinant follicle stimulating hormone
- a subject who is using contraception may begin her stimulation protocol with rFSH 4-6 days (e.g., 4 days, 5 days, or 6 days) after consuming her last oral contraception pill, with preference for 5 days following the dosing of her last oral contraception pill.
- rFSH stimulation may be utilized for 2 to 3 days (e.g., 2 days or 3 days), depending on a subject’s tolerance, follicle size, and/or growth dynamics.
- a coasting period of 1 to 3 days e.g., 1 day, 2 days, or 3 days
- 1 day, 2 days, or 3 days may be utilized to monitor follicle size and allow for further follicle maturation and development.
- a “coasting period,” as used in this disclosure, is any period of time when a medication used throughout a stimulation protocol is not administered and/or consumed.
- a coasting period may last for example for 1 day, 2 days, 3 days, or more if medically necessary.
- a subject may continue to receive one or more ultrasounds to monitor her progression.
- a subject may be triggered with a dose of a triggering agent, such as human chorionic gonadotropin (hCG).
- a triggering agent such as human chorionic gonadotropin (hCG).
- hCG human chorionic gonadotropin
- a “follicle measurement” as used in this disclosure is any measurement of an ovarian follicle.
- a follicle may include any sac found in an ovary that contains an unfertilized egg.
- a follicle measurement may be obtained using any methodology as described herein, including for example an ultrasound, a manual measurement, an automated measurement and the like.
- a double hCG injection may be utilized, to induce follicle maturation to prepare one or more follicles for retrieval.
- a double hCG injection may be two or three injections of hCG.
- a blood test for one or more hormone levels such as E2, P4, and LH may be performed on the trigger day of the double dose of hCG injection to monitor hormone levels. After the day of the double dose of hCG, one or more hormone levels may be measured such as for example with a blood test to determine and examine levels of E2, P4, and LH.
- a “triggering agent” is a chemical that triggers cell generation in the ovaries.
- a triggering agent e.g., a follicular triggering agent
- a triggering agent may include any substance including any non-prescription and/or prescription product.
- a triggering agent e.g., a follicular triggering agent
- a subject may not receive a triggering agent (e.g., a follicular triggering agent) to stimulate oocyte production.
- a subject may receive multiple injections of a triggering agent over 1 to 4 days (e.g., 1 day, 2 days, 3 days, or 4 days) but no more than 5 days in the preferred stimulation protocol.
- a subject may receive multiple injections over multiple days such that a subject receives five dose injections of one or multiple triggering agents.
- a subject may receive three days of stimulation using 300 IU to 700 IU of rFSH per injection (e.g., 300-500 IU, 400-600 IU, 500-700 IU, 300-350 IU, 350-400 IU, 400-450 IU, 450-500 IU, 500-550 IU, 550-600 IU, 600-650 IU, 650-700 IU; e.g., 300 IU, 325 IU, 350 IU, 375 IU, 400 IU, 425 IU, 450 IU, 475 IU, 500 IU, 525 IU, 550 IU, 575 IU, 600 IU, 625 IU, 650 IU, 675 IU, or 700 IU) with one or more injections per day.
- 300 IU to 700 IU of rFSH per injection e.g., 300-500 IU, 400-600 IU, 500-700 IU, 300-350 IU, 350-400 IU, 400-450 IU, 450
- a subject may receive injections of hCG as a triggering agent (e.g., a follicular triggering agent) using 200-700 pg or 2,500-10,000 IU hCG (e.g., 200-500 pg, 300-600 pg, 400-700 pg, 200-300 pg, 300-400 pg, 400-500 pg, 500-600 pg, or 600-700 pg), with a preferred stimulation dose of 500 pg.
- a triggering agent e.g., a follicular triggering agent
- a subject may receive one or more administrations (e.g., by oral administration or by injection) of clomiphene citrate in combination with other triggering agents with a dose of 50-150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110- 130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg) of clomiphene citrate per injection for up to 8 days (e.g., 1 day, 2 days, 3 days, 4 days, 5 days, 6 days, 7 days, or 8 days).
- administrations e.g., by oral administration or by injection
- other triggering agents with a dose of 50-150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110- 130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg,
- a subject Prior to receiving a triggering agent, a subject’s serum may be evaluated for levels of hormones or other relevant compounds.
- a subject may have serum levels of estradiol from about 250 pg/mL to about 400 pg/mL (e.g., from about 250 pg/mL to about 275 pg/mL, from about 275 pg/mL to about 300 pg/mL, from about 300 pg/mL to about 325 pg/mL, from about 325 pg/mL to about 350 pg/mL, from about 350 pg/mL to about 375 pg/mL, or from about 375 pg/mL to about 400 pg/mL; e.g., about 250 pg/mL, about 260 pg/mL, about 270 pg/mL, about 280 pg/mL, about 290 pg/mL, about 300 pg/mL, about
- a subject may have serum levels of progesterone from about 0.25 ng/mL to about 0.75 ng/mL (e.g., from about 0.25 ng/mL to about 0.35 ng/mL, from about 0.35 ng/mL to about 0.45 ng/mL, from about 0.45 ng/mL to about 0.55 ng/mL, from about 0.55 ng/mL to about 0.65 ng/mL, or from about 0.65 ng/mL to about 0.75 ng/mL; e.g., about 0.25 ng/mL, about 0.30 ng/mL, about 0.35 ng/mL, about 0.40 ng/mL, about 0.45 ng/mL, about 0.50 ng/mL, about 0.55 ng/mL, about 0.60 ng/mL, about 0.65 ng/mL, about 0.70 ng/mL, or about 0.75 ng/mL) prior to receiving a triggering agent.
- ng/mL
- a subject may have serum levels of LH from about 1 .0 mIU/mL to about 2.5 mIU/mL (e.g., from about 1 .0 mIU/mL to about 1 .5 mIU/mL, from about 1 .5 mIU/mL to about 2.0 mIU/mL, or from about 2.0 mIU/mL to about 2.5 mIU/mL; e.g., about 1 .0 mIU/mL, about 1 .25 mIU/mL, about 1 .5 mIU/mL, about 1 .75 mIU/mL, about 2 mIU/mL, about 2.25 mIU/mL, or about 2.5 mIU/mL) prior to receiving a triggering agent.
- a triggering agent e.g., from about 1 .0 mIU/mL to about 1 .5 mIU/mL, from about 1 .5 mIU/mL to about 2.0 mIU/mL
- a subject may have serum levels of FSH from about 11 mIU/mL to about 14 mIU/mL (e.g., from about 11 mIU/mL to about 12 mIU/mL, from about 12 mIU/mL to about 13 mIU/mL, or from about 13 mIU/mL to about 14 mIU/mL; e.g., about 11 mIU/mL, about 12 mIU/mL, about 13 mIU/mL, or about 14 mIU/mL) prior to receiving a triggering agent.
- FSH serum levels of FSH from about 11 mIU/mL to about 14 mIU/mL
- the triggering agent may be administered over a course of time to produce a follicle stimulation protocol that is a minimal stimulation protocol.
- the minimal stimulation protocol is configured by a skilled practitioner to trigger the release of a cell in the span of about 3 days.
- a “minimal stimulation protocol” is a stimulation process spanning over a shortened period of time, compared to average in vitro fertilization (IVF) stimulation protocols, to aid in inducing an ovary to produce an oocyte.
- IVVF in vitro fertilization
- the minimal stimulation protocol may induce the release of a cell in a span of 8 days or less (e.g.
- the average time for performing a minimal stimulation protocol may be 2 days.
- the average time for performing a minimal stimulation protocol may be 3 days.
- the average time for performing a minimal stimulation protocol may be 4 days.
- the average time for performing a minimal stimulation protocol may be 5 days.
- the average time for performing a minimal stimulation protocol may be 6 days.
- the minimal stimulation protocol may not require administration of a follicular triggering agent for successful retrieval and subsequent maturation of an oocyte.
- the minimal stimulation protocol may include selecting a first triggering agent (e.g., a follicular triggering agent) and selecting a second triggering agent (e.g., a follicular triggering agent) as a function of a follicle measurement and/or other biological sample data.
- oocytes (or a group of cells containing an oocyte) are retrieved from the subject.
- An “oocyte,” as used in this disclosure, is a reproductive cell originating from an ovary.
- a subject may undergo an oocyte retrieval.
- triggering agent e.g., a follicular triggering agent
- Hormone levels of E2 may be from about 300 pg/mL to about 450 pg/mL (e.g., from about 300 pg/mL to about 350 pg/mL, from about 350 pg/mL to about 400 pg/mL, or from about 400 pg/mL to about 450 pg/mL; e.g., about 300 pg/mL, about 325 pg/mL, about 350 pg/mL, about 375 pg/mL, about 400 pg/mL, about 425 pg/mL, or about 450 pg/mL) on the day of oocyte retrieval.
- Hormone levels of LH may be from about 3 mIU/mL to about 6 mIU/mL (e.g., from about 3 mIU/mL to about 4 mIU/mL, from about 4 mIU/mL to about 5 mIU/mL, or from about 5 mIU/mL to about 6 mIU/mL; e.g., about 3 mIU/mL, about 3.5 mIU/mL, about 4 mIU/mL, about 4.5 mIU/mL, about 5 mIU/mL, about 5.5 mIU/mL, or about 6 mIU/mL) on the day of oocyte retrieval.
- Hormone levels of FSH may be from about 6 mIU/mL to about 9 mIU/mL (e.g., from about 6 mIU/mL to about 7 mIU/mL, from about 7 mIU/mL to about 8 mIU/mL, or from about 8 mIU/mL to about 9 mIU/mL; e.g., about 6 mIU/mL, about 6.5 mIU/mL, about 7 mIU/mL, about 7.5 mIU/mL, about 8 mIU/mL, about 8.5 mIU/mL, or about 9 mIU/mL) on the day of oocyte retrieval.
- Hormone levels of P4 may be from about 0.5 ng/mL to about 1 .5 ng/mL (e.g., from about 0.5 ng/mL to about 1 .0 ng/mL, from about 0.75 ng/mL to about 1 .0 ng/mL, from about 1 .0 ng/mL to about 1 .5 ng/mL, or from about 1 .25 ng/mL to about 1 .5 ng/mL; e.g., about 0.5 ng/mL, about 0.75 ng/mL, about 1 .0 ng/mL, about 1 .25 ng/mL, or about 1 .5 ng/mL) on the day of oocyte retrieval.
- Oocytes (or a group of cells containing an oocyte) are retrieved from the subject using methods known in the art. For example, oocytes may be retrieved via aspiration using a transvaginal ultrasound with a needle guide on the probe to suction released follicular contents. Follicular aspirates may then be examined using a dissection microscope and washed with HEPES media (G-MOPS Plus, VITROLIFE®) and filtered with a 70-micron cell strainer (FALCON®, Corning). Oocytes and/or COCs are then transferred to culture dishes and media to begin co-culturing and appropriate controls, as described herein.
- HEPES media G-MOPS Plus, VITROLIFE®
- FALCON® 70-micron cell strainer
- Other retrieval methods may include an extraction device, such as a needle, syringe, vial, lancet, Evacuated Collection Tubes (ECT), tourniquet, vacuum extraction tube systems, any combination thereof and the like.
- the extraction device may comprise a butterfly needle set.
- a retrieved oocyte may include but is not limited to an immature oocyte, a mature oocyte, a group of one or more oocytes, a group of one or more cells, such as a cumulus oocyte complex, among other examples.
- a “cumulus oocyte complex” (COC) as used in this disclosure, is an oocyte containing one or more surrounding cumulus cells.
- a COC may contain an immature oocyte.
- a COC may contain a mature oocyte.
- an immature oocyte as used in this disclosure is one or more immature reproductive cells originating in the ovaries.
- an immature oocyte may be an oocyte including but not limited to germinal vesicle stage (GV) and metaphase I stage (Ml) oocytes, as described further below.
- an immature oocyte may be a plurality of oocytes.
- An immature oocyte may be immature cumulus-oocyte-complexes (COCs) taken from a subject.
- a “mature oocyte” as used in this disclosure, may be one or more mature oocytes in metaphase II stage (MH). Once retrieved, a COC may rest for 1 hour, 2 hours, 3 hours or more to allow for equilibration to in vitro conditions for in vitro maturation.
- any one or more of the retrieved oocytes or cells described herein may be appropriately frozen and stored using methods known in the art for future use, analysis, or experimentation. Additionally, any one or more of the retrieved oocytes or cells described herein may be used fresh (i.e., ready for immediate use such as use for in vitro maturation or any one or more analyses or experimentation described herein).
- oocyte denudation refers to the removal of cumulus cells or other cell types from the oocyte by means of mechanical separation, chemical separation, or combinations thereof.
- oocyte denudation may occur in a IVM well, by gently mechanically disassociating cells by pipetting to remove most cumulus and/or granulosa cells. If enzymatic disassociation is needed, the cells may be transferred to a separate dish for hyaluronidase treatment.
- COCs may be stripped with stripper tips and washed in IVM media or MOPS plus media to clean the oocyte for imaging and if needed inactivate hyaluronidase.
- Stripper tips may include 200 micron and/or 400 microns for fine cleaning.
- germinal vesical (GV)-stage) and metaphase I (Ml)-stage oocytes may be formulated and utilized in cultivation following denudation of the COCs. Denuded COCs may be transferred to a separate culture dish for imaging.
- an oocyte may be combined with one or more OSCs such as one or more granulosa or stroma cells.
- OSC is a cumulus cell that surrounds the oocyte to ensure healthy oocyte and subsequent embryo development.
- the granulosa and/or stroma co-culture cells derive from differentiated induced pluripotent stem cells (iPSCs) such as human iPSCs (hiPSCs) as described herein (see, Section 1(A)).
- iPSCs differentiated induced pluripotent stem cells
- hiPSCs human iPSCs
- a “co-culture” is a cell cultivation set-up, in which two or more different populations of cells are grown with some degree of contact between them.
- steroidogenic granulosa cells derived from human induced pluripotent stem cells hiPSCs, may be co-cultured with immature oocytes to form COCs, thereby reconstituting the follicular niche in vitro to promote rapid and efficient oocyte maturation in a manner that reinforces oocyte health and developmental competence.
- a “steroidogenic granulosa cell” is a granulosa cell expressing high levels of steroidogenic enzymes that produce estradiol.
- a steroidogenic granulosa cell may be a mural granulosa cell extracted from the antral follicle.
- Applying steroidogenic granulosa cells in the co-cultures of COCs may increase oocyte maturation in vitro after egg/oocyte retrieval, allowing for utilization of all retrieved eggs/oocyte by directly supplying nutrients, raw materials, and mechanical support to oocytes throughout gametogenesis and folliculogenesis.
- Steroidogenic granulosa cells may grow and perform oocyte maturation of immature oocytes in standard IVF and IVM media as described further below. This may increase the overall pool of available, healthy oocytes for use in IVF and reduce the number of ova/oocyte retrieval procedures a user is subjected to.
- a cell culture may be formed by combining an immature oocyte with a population of engineered OSCs, which is added to mature the oocyte in the cell culture and thus create a COC after extraction of one or more oocytes following the minimal stimulation protocol.
- one or more specialized granulosa cells and/or specialized stroma cells may be thawed during a resting period of one or more COCs.
- 50,000- 150,000 specialized granulosa cells e.g., 50,000-60,000 cells, 60,000-70,000 cells, 70,000-80,000 cells, 80,000-90,000 cells, 90,000-100,000 cells, 100,000-110,000 cells, 110,000-120,000 cells, 120,000- 130,000 cells, 130,000-140,000 cells, or 140,000-150,000 cells; e.g., 50,000 cells, 55,000 cells, 60,000 cells, 65,000 cells, 70,000 cells, 75,000 cells, 80,000 cells, 85,000 cells, 90,000 cells, 95,000 cells, 100,000 cells, 105,000 cells, 110,000 cells, 115,000 cells, 120,000 cells, 125,000 cells, 130,000 cells, 135,000 cells, 140,000 cells, 145,000 cells, or 150,000 cells) may be combined with a COC during culturing.
- 50,000 cells e.g., 50,000-60,000 cells, 60,000-70,000 cells, 70,000-80,000 cells, 80,000-90,000 cells, 90,000-100,000 cells, 100,000-110,000 cells, 110,000-120,000 cells, 120,000- 130,000 cells
- thawed specialized granulosa cells may be placed into a culture media prior to COC retrieval, including anywhere from about 24-120 hours beforehand (e.g., about 24-48 hours, about 48-72 hours, about 72-96 hours, about 96-120 hours; e.g., about 24-36 hours, about 30-40 hours, about 36-48 hours, about 48-56 hours, about 56-72 hours, about 72-84 hours, about 80-96 hours, about 90-100 hours about 96-108 hours, about 108-120 hours; e.g., about 24 hours, about 30 hours, about 36 hours, about 42 hours, about 48 hours, about 56 hours, about 60 hours, about 65 hours, about 72 hours, about 78 hours, about 86 hours, about 92 hours, about 96 hours, about 102 hours, about 110 hours, about 115 hours, about 120 hours).
- about 24-120 hours e.g., about 24-48 hours, about 48-72 hours, about 72-96 hours, about 96-120 hours; e.g.,
- a COC may be transferred into culture media containing thawed specialized granulosa cells to form a group culture as described below in more detail.
- a group culture may be cultured in an incubator ranging in time from anywhere between 12-48 hours (e.g., 12-16 hours, 12-20 hours, 18-24 hours, 18-36 hours, 24-36 hours, 36-48 hours; e.g., 12 hours, 16 hours, 20 hours, 24 hours, 28 hours, 32 hours, 36 hours, 40 hours, 44 hours, 48 hours).
- the co-culture may be conducted at a biologically suitable temperature, e.g., 37°C.
- a retrieved oocyte including immature cumulus-oocyte complexes, may be cultured in a group culture.
- a “group culture” is an extracted COC combined with one or more additional cells.
- An additional cell may include any cell grown together with an extracted COC.
- An additional cell may include a specialized stroma cell.
- An additional cell may include a specialized granulosa cell.
- a group culture may be cultured and/or incubated for a particular length of time, such as from between 12-120 hours (e.g., 12-24 hours, 12-36 hours, 24-48 hours, 36-60 hours, 54-72 hours, 68-96 hours, 96-120 hours; e.g., 12 hours, 14 hours, 16 hours, 18 hours, 20 hours, 22 hours, 24 hours, 26 hours, 28 hours, 30 hours, 32 hours, 34 hours, 36 hours, 38 hours, 40 hours, 42 hours, 44 hours, 46 hours, 48 hours, 50 hours, 52 hours, 54 hours, 56 hours, 58 hours, 60 hours, 62 hours, 64 hours, 66 hours, 68 hours, 70 hours, 72 hours, 74 hours, 76 hours, 78 hours, 80 hours, 82 hours, 84 hours, 86 hours, 88 hours, 90 hours, 92 hours, 94 hours, 96 hours, 98 hours, 100 hours, 102 hours, 104 hours, 106 hours, 108 hours, 110 hours, 112 hours, 114 hours,
- group culturing may include culturing the COCs with a granulosa co-culture as described further below.
- group culturing may include culturing a control group of COCs with no co-culture, as described further below.
- a user may donate immature oocytes, such as GV-stage and Ml-stage oocytes that may be used in medium as part of the group culture to help grow COCs.
- Oocyte donation may follow an oocyte retrieval process as discussed above.
- a subject participating in oocyte donation may be different, or the same, from the subject related to the second biological sample containing immature COCs.
- an oocyte donation subject may undergo a stimulation protocol as disclosed above.
- the maturity of the oocyte retrieved from the subject may dictate the length of time during which the oocyte is co-cultured with ovarian support cells (e.g., specialized granulosa cells and/or specialized stroma cells). For example, less mature oocytes (e.g., GV oocytes) may require longer co-culturing periods than oocytes at a more advanced stage of meiosis (e.g., Ml oocytes).
- ovarian support cells e.g., specialized granulosa cells and/or specialized stroma cells
- cell culture media may include LAG media (Medicult, COOPERSURGICAL®).
- LAG media may be used for the incubation of oocytes and/or COCs post-retrieval from minimal stimulation protocol.
- a modified-Medicult IVM media may be used as a baseline control during the culturing process.
- the cell culture media may include metabolites as exemplified in FIG. 5.
- the modified-Medicult IVM media may include human serum albumin, FSH, hCG, androstenedione, doxycycline, or any combination thereof.
- Media may be equilibrated for about 18 to 24 hours (e.g., about 18 hours, about 20 hours, about 22 hours, about 24 hours) pre-culture in a standard sterile 37°C incubator with 02 (e.g., having a 1 -10% 02 atmosphere, such as 4-8% 02 or 5-7% 02, e.g., 6% 02) and proper C02 levels, which are known in the art.
- Co-cultures and specialized granulosa cell cultures may be adherent cell cultures in cell culture dishes or flasks.
- Co-cultures and specialized granulosa cell cultures may be suspension cell cultures in cell culture flasks.
- Cell culture materials and methods include standard sterile cell culturing methods known in the art. Cell morphology and cell viability may be evaluated via one or more established methods known in the art.
- co-culturing is performed in accordance with the steps outlined in FIG. 6.
- a population of ovarian support cells e.g., ovarian granulosa cells
- the ovarian support cells are cryopreserved, thawed.
- the ovarian support cells are centrifuged to form a cell pellet and are subsequently resuspended in media suitable for in vitro maturation.
- the ovarian support cells are centrifuged one or more additional times and, each time, are resuspended in in vitro maturation media.
- the ovarian support cells may then be co-cultured with an oocyte obtained from the subject undergoing an ART procedure, thereby inducing oocyte maturation.
- Specialized granulosa cells utilized in the methods described herein may be created from hiPSCs using transcription factor (TF)-directed protocols described herein.
- TF transcription factor
- a subject may donate hiPSCs.
- hiPSCs donation may follow an oocyte retrieval process as discussed above.
- a subject participating in hiPSCs donation may be different, or the same, from the subject from which the oocyte was retrieved.
- a hiPSC donor may undergo a stimulation protocol as disclosed above.
- hiPSCs, granulosa cells, cumulus cells, oocytes, GV-stage oocytes, Ml- stage oocytes, Mil-stage oocytes and all other types of cells described through this disclosure may be lysed, extracted for genomic material and flash frozen for further manipulation and/or analysis (e.g., for analysis as part of an omics data collection technique described in Section I ll(C)(iii), below).
- cells may undergo enzymatic cell lysis using enzymes such as lysozyme, lysostaphin, zymolase, cellulose, protease or glycanase, and the like.
- culture media may be flash frozen. Freezing methods may include using a cryoprotective agent such as dimethyl sulfoxide and/or any other freezing method known in the art.
- an oocyte and/or granulosa cells may be appropriately frozen and stored for future analyses, experimentation, or for use in oocyte maturation.
- Oocytes may be scored with a scoring metric based on their morphology as determined by imagine analysis.
- assignment of the scoring metric may include imaging the group cultures and analyzing the images of one or both of co-culture and no co-culture growth media-only control groups.
- oocytes are scored and comparatively analyzed during any such stage of in vitro maturation.
- group culture images may contain a pre-culture group COC image, a post-culture group COC image, and a post-culture denuded oocyte image.
- oocytes may be assessed and subsequently classified by their maturation state according to the following criteria:
- GV - presence of a germinal vesicle, typically containing a single nucleolus within the oocyte.
- Ml absence of a germinal vesicle within the oocyte and absence of a polar body in the perivitelline space between the oocyte and the zona pellucida.
- the scoring metric may include total oocyte scoring (TOS) as a function of analyzing the imaged group cultures via relevant microscopy or imaging analysis software.
- TOS total oocyte scoring
- Methods and approaches of TOS have been described in the art (Lazzaroni-Tealdi et al., PLoS One 10:e0143632, 2015).
- Oocyte scoring may include metrics such as shape, size, ooplasm characteristics, structure of the perivitelline space (PVS), zona pellucida (ZP), polar body (PB) morphology, among other possible qualifiers.
- Total oocyte scoring on both pre and post culture oocyte images for generation of the TOS metric may be based on a scale system of -6 to + 6.
- oocyte shape if oocyte morphology is poor (dark general oocyte coloration and/or ovoid shape), it may be assigned a value of -1 ; if it is almost normal (less dark general oocyte coloration and less ovoid shape), it may be assigned a value of 0; if it is judged to be normal, it may be assigned a value of + 1 .
- oocyte size if oocyte size is defined as abnormally small or large, it may be assigned a value -1 if size is below 120 pm or greater 160 pm.
- a value of 0 may be assigned, and a value of + 1 may be assigned if oocyte size is within normal range > 130 pm and ⁇ 150 pm.
- ooplasm characteristics if the ooplasm is very granular and/or very vacuolated and/or demonstrates several inclusions, a value of -1 may assigned. If it is only slightly granular and/or demonstrates only few inclusions, a value of 0 may be assigned. Absence of granularity and inclusions may result in a +1 value.
- PB morphology is defined as follows: Flat and/or multiple PBs or zero PBs, granular and/ or either abnormally small or large PBs is designated as -1 . PBs, judged as fair but not excellent may be designated as 0, and a designation of +1 may be given to PBs of normal size and shape.
- Mil oocytes PB score may not be aggregated into TOS.
- the scoring metric may include performing an outcome analysis as a function of the TOS as defined and exemplified in FIG. 7. Parametric or non-parametric tests may be applied to determine the significance of findings during the analysis.
- Outcome analysis may be used to determine GV-stage to Mil-stage oocyte maturation rate; GV-stage to Ml-stage oocyte maturation rate; Ml-stage to Mil-stage oocyte maturation rate; Average Total Oocyte Score; Average Oocyte Shape; Average Oocyte Size; Average Ooplasm quality; Average PVS quality; Average ZP quality; Average Polar Body quality, and the like. In some embodiments these outcomes may reported as a as mean, median, and deviation.
- any one or more ova or oocytes as described herein may be evaluated for quality or maturation state, such as by the scoring metrics described herein, to determine their readiness for use in in vitro fertilization and embryo formation.
- the ova or oocytes may be matured via in vitro maturation and subsequently utilized for IVF and/or ART as described herein.
- Any one or more oocytes may be utilized for intracytoplasmic sperm injection (ICSI).
- ICSI intracytoplasmic sperm injection
- the subsequently formed zygote can be matured ex vivo so as to produce an embryo, such as a morula or blastula (e.g., a mammalian blastocyst), which can then be transferred to the uterus of a subject (e.g., a subject from which the oocyte was initially harvested) for implantation into the endometrium.
- a morula or blastula e.g., a mammalian blastocyst
- Embryo transfers that can be performed using the methods described herein include fresh embryo transfers, in which the ovum or oocyte used for embryo generation is retrieved from the subject and the ensuing embryo is transferred to the subject during the same menstrual cycle.
- the embryo can alternatively be produced and cryopreserved for long-term storage prior to transfer to the subject.
- the scoring metric may include an Omics-based analysis.
- frozen cell lysates and cell culture media may be analyzed for bulk RNA-sequencing, whole genome bisulfite sequencing (WGBS), mass spectrometry-based proteomics and metabolomics.
- Cell culture media may be utilized for metabolomics analysis to determine changes in molecular content of media following co-culture compared to pre-culture media controls. This may be utilized to profile dynamic changes in paracrine signaling between granulosa cells and oocytes. The data gathered may then be aggregated for downstream analysis for determination of changes in epigenetic state, metabolite presence, and gene expression between different co-culture conditions and controls.
- an omics-based analysis may include, genomics, proteomics, transcriptomics, pharmacogenomics, epigenomics, microbiomics, lipidomics, glycomics, transcriptomics culturomics, and/or any other omics one skilled in the art would understand as applicable.
- an oocyte that has failed to mature, showing GV or Ml characteristics may be harvested for single cell RNA-sequencing, along with their associated granulosa cells from their culture. For this, oocytes and granulosa cells may be flash frozen and for library preparation.
- oocytes that display Mil oocyte development half may be harvested for single cell RNA-sequencing along with their associated granulosa cells using the above flash freeze methods described throughout this disclosure. The remaining half of Mil oocytes may be utilized for proteomic studies.
- the culture media for all conditions may additionally be flash frozen and utilized for metabolomics and proteomics to identify cholesterol metabolite levels and paracrine protein production.
- frozen cell lysates and cell culture mediums may be analyzed for bulk RNA-sequencing, whole genome bisulfite sequencing (WGBS), mass spectrometry-based proteomics and metabolomics.
- WGBS whole genome bisulfite sequencing
- Cell culture media may be utilized for metabolomics analysis to determine changes in molecular content of media following co-culture compared to pre-culture media controls to profile dynamic changes in paracrine signaling between granulosa cells and oocytes. As the media components are flash frozen, the sample is effectively quenched and amenable to metabolic assessment. The data gathered may then be aggregated for downstream analysis for determination of changes in epigenetic state, metabolite presence, and gene expression between different co-culture conditions and controls.
- compositions or methods described herein can be provided in a kit for use in reprogramming iPSCs (e.g., hiPSCs) into a population of OSCs (e.g., granulosa cells and/or stroma cells).
- OSCs e.g., granulosa cells and/or stroma cells.
- the compositions and methods described herein can be provided in a kit for use in coculturing one or more oocytes with OSCs to produce one or more mature oocytes, optionally wherein the resulting mature oocytes are further fertilized to form an embryo in an ART or IVF procedure.
- the kit may include a package insert that instructs a user of the kit to perform iPSC differentiation and/or in vitro maturation.
- the kit may include a package insert that instructs a user of the kit to perform any one of the methods of ovarian stimulation and/or oocyte retrieval described herein.
- the kit may optionally include a syringe or device for administering the compositions of the present disclosure or for retrieving one or more oocytes.
- the kit may include one or more additional cell media or agents used for cell culture.
- the kit includes one or more antibodies or binding molecules to detect the expression of one or more genes or biomarkers described herein.
- Example 1 A method of producing ovarian support cells by reprogramming induced pluripotent stem cells
- iPSCs Induced pluripotent stem cells
- OSCs ovarian support cells
- OSCs provide a much more physiologically relevant, ovarian-like dynamic environment for IVM than media alone, leading to improved maturation outcomes and therefore creating significant potential for our engineered cells as an ART to improve fertility treatments in the clinic.
- Detailed in this example is our work to develop and optimize approaches for consistent manufacturing at scale under good manufacturing practice conditions with animal origin-free materials without impacting product purity, efficacy, and safety.
- the stem-cell line derived from human-skin fibroblasts, was generated under good manufacturing practice (GMP) conditions using a non-integrating, mRNA-based reprogramming technology with controlled conditions and GMP-compliant reagents used for the entirety of the manufacturing process.
- GMP manufacturing practice
- proper controls were implemented for fibroblast derivation according to established guidelines, while reprogramming and cell expansion took place under fully GMP conditions in compliance with regulatory standards and guidelines of the FDA, EMA, and PMDA.
- the sourced clonal hiPSC line was expanded in a Research Cell Bank (RCB) prior to our internal cell engineering.
- the Research Cell Bank was created by expanding the parental cell line for one passage and storing multiple samples cryopreserved to ensure sufficient material for engineering, as well as to secure a stock of the parental cell line in ideal culture conditions, either as a back-up or for future use.
- Reprocell, Inc. the provider of the original hiPSC line, executed in depth characterization to ensure conformance with established commercial release criteria, while we performed further testing in downstream steps of the process to confirm pluripotency, identity, genetic stability, and potency of cells.
- Plasmids utilized for engineering were screened for identity, integrity, and purity verified by whole plasmid sequencing utilizing nanopore technologies and were stored at -20°C, while glycerol stocks of transformed bacteria are stored at -80°C. Plasmids encoding the transcription factors and piggyBac transpose were transfected into hiPSCs with a Lonza NUCLEOFECTORTM device.
- clones were established by limiting dilution in multiwell plate format. All wells were closely monitored daily until identification of single clones in each well. Wells with more than one clone identified were discarded. Each identified clone was further expanded and cryopreserved resulting in 43 seed clones. Each clone was initially assigned a unique code based on their plate location. The 43 seed clones were subjected to genotyping PCR to identify the presence of the three transcription factors.
- Transcription factor mediated differentiation consistently generates ovarian support cells in different stages of ovarian development and folliculogenesis
- hiPSCs After 5 days of induction, hiPSCs multiply 3.12 ⁇ 1 .77 times, and acquire morphological features that resemble human granulosa cells, such as clusters of cells with spiky edges and granules observed in the cell body.
- Differentiated OSCs also express FOXL2 and CD82, two well characterized markers of granulosa cellfate, indicating successful differentiation into the desired cell type.
- the class assigned as Early GCs also shares transcriptional similarities to preGC-l and -lla/llb, including expression of the genes FOXO1 and CDH1 (FIG. 1 B).
- a subcluster of these cells, labeled as Early GC I expresses the aromatase gene, CYP19A1 , which has been described to be upregulated in preGC-ls in the ovarian medulla, as well as the gene for the chemotactic protein, RARRES2, which has been shown to reduce steroidogenesis and block oocyte meiotic progression in bovine models.
- the subcluster Early GC II also expresses the gene for RARRES2, similarly to the previous subcluster described, in addition to the receptor NOTCH2 (FIG. 1 B).
- the NOTCH signaling pathway is involved in the oocyte-GC crosstalk during folliculogenesis, and high levels of expression of NOTCH2 and NOTCH3 in cumulus cells have been positively correlated with IVF response.
- expression of RARRES2 is no longer observed, as in the previous subcluster; while NOTCH2 expression continues to be detected in significant levels.
- the class of GCs is marked by the expression of CDH2 in addition to all the other granulosa markers previously described, including the NOTCH2/3 receptors (FIG. 1 B).
- the subcluster GC I is enriched for the genes NRG1 , BMPR1 B, and genes of the ERBB family of receptors (FIG. 1 B).
- NRG1 has been identified to be differentially expressed in preGC- lla/l lb and was found to be expressed and secreted by granulosa cells in response to ovulatory surge.
- BMPR1 B, EGFR (ERBB1 ), and ERBB4 are all receptors identified in granulosa cells and have counterpart ligands expressed in oocytes (BMP6, TGFA, and NRG4, respectively). These interactions have been proposed to mediate follicular assembly.
- the subcluster labeled as GC II is enriched by expression of the gene ID3, which is a target of the receptor BMPR2, also expressed by these cells.
- BMPR2 is expressed by all Early GCs and GC clusters
- the CG II subcluster is the subcluster with the strongest enrichment of this target gene (FIG. 1 B), suggesting activation of the receptor BMPR2 in these cells.
- GC III The last subcluster from the GC class, GC III is composed of cells expressing both CDH2 and NOTCH2, but this subcluster is not enriched for any of the other genes previously described in the subclusters for this class.
- the last three subclusters identified were incorporated into a third class labeled as Others. These clusters have overall lower expression of most markers including GJA1 and CDH2 (FIG. 1 B). Lower expression levels of GJA1 and CDH2 have been described in GCs undergoing early stages of atresia. Interestingly, cells on the Atresia/Luteolysis subcluster also express genes involved in steroidogenesis, such as CYP11 A1 , CYP19A1 , and HSD17B1 , as well as CGA, which is an estrogen receptor alpha-responsive gene in human breast cancer cells.
- the other two clusters are also enriched for the GCA gene, but the top expressed genes in each of the clusters are either mitochondrial genes in the Mitochondrial enriched subcluster or ribosomal genes for the Ribosomal enriched subcluster.
- mitochondrial and/or ribosomal genes in scRNA-seq analysis is associated with poor quality cells, further suggesting that these clusters are composed of dying cells. It is important to highlight that it is unclear whether this observation is a consequence of the biology of ovarian support cells or whether it is an artifact of processing and handling the samples.
- matrigel which is derived from Engelbreth-Holm-Swarm mouse sarcoma cells, and contains multiple extracellular matrix components of tissue basement membranes. Due to the nature of this reagent, matrigel is also subjected to significant lot-to-lot variability, which can impact the overall reproducibility of the final product.
- the most commonly used alternative substrate for hiPSCs cultures are human recombinant laminin-521 and vitronectin. Laminin in particular is one of the main components of matrigel, while vitronectin can be found in trace amounts.
- OSCs differentiated onto vitronectin had also a higher percentage of cells in the clusters of both ribosomal and mitochondrial gene enrichment (FIG. 2).
- this data indicates that differentiation performed onto laminin-521 and vitronectin, generated similar cell fates to the ones characterized in the preceding section, and therefore it is unlikely that these modifications will impact function of the cells.
- these results demonstrate that the final OSC fate can be modulated by not only the overexpression of the three transcription factors, but it can also be significantly influenced by the nature of the matrix utilized as the substrate (FIG. 2).
- Laminin-OSCs were harvested at 94.63 ⁇ 0.01 % viability and during differentiation were multiplied at a ratio of 14.83 ⁇ 4.48 OSC:hiPSCs.
- vitronectin-OSCs were harvested at 85.25 ⁇ 0.1 1 % viability and were multiplied at a ratio of 5.86 ⁇ 1 .30 OSC:hiPSC.
- the clinical-grade hiPSC line was engineered to harbor inducible versions of the three transcription factors that drive differentiation into OSCs, namely NR5A1 , RUNX2, and GATA4.
- Individual clones were generated by limiting dilution of the pooled engineered population and expanded into seed banks. All the clones successfully expanded were subjected to initial screening by genotyping PCR to confirm the integration of the three transcription factors (FIG. 3A).
- Nine seed clones harboring all the transcription factors were selected to proceed with a more in-depth screening process, which included assessing their identity, potency, and safety. For that, each clone was individually differentiated into OSCs (FIG. 3B), and multiple features were recorded for screening purposes and identification of the top lead candidates.
- clone GTO-101 demonstrated high performance for OSC production and maturation of oocytes.
- GTO-101 To further characterize clone GTO-101 for clinical applications, we assessed and confirmed the presence of hiPSC markers, as well as confirmed cell identity and normal karyotype (FIG. 4A). We then generated two independent batches of differentiated GTO-101 , leveraging the protocol previously identified as the most appropriate to be transitioned into clinical manufacturing. More specifically, GTO- 101 hiPSCs were differentiated with highest grade raw material onto laminin-521 coated dishes. As expected, cell morphology upon differentiation was characterized by small cells with granules in the cell body, tightly packed into clusters with spiky edges.
- Example 2 A method of producing ovarian support cells from iPSCs
- iPSC differentiation e.g., reprogramming or engineering
- this example is a non-limiting embodiment of the present disclosure, intended to describe potential protocols for manufacturing OSCs from iPSC precursors.
- iPSCs e.g., hiPSCs
- a suitable culture dish that contains cell media (e.g., in vitro maturation (IVM) cell media) and a matrix such as a matrix that comprises laminin.
- the undifferentiated hiPSCs are reprogrammed using a transposase expression plasmid (e.g., a piggyBac transposase method) to carry specific inducible transcription factors (e.g., FOXL2, NR5A1 , RUNX2, and/or GATA4).
- a transposase expression plasmid e.g., a piggyBac transposase method
- specific inducible transcription factors e.g., FOXL2, NR5A1 , RUNX2, and/or GATA4
- Wnt/p-catenin pathway activators including a ROCK inhibitor (e.g., Y-27642) and a GSK3 inhibitor (e.g., CHIR099021 ) were also added to the media to prime the cellular environment for mesodermal cell fate.
- ROCK inhibitor e.g., Y-27642
- GSK3 inhibitor e.g., CHIR099021
- the cells are induced for about 5 days (e.g., about 2 days, about 3 days, about 4 days, about 5 days, about 6 days, about 7 days). Over the course of the reprogramming, expression of genes or biomarkers that correspond to one or more types of OSCs are assessed. Expression levels of mRNA and protein as assessed by RT-PCR and flow cytometry confirm that a portion population of cells express FOXL2 and AMHR2, and a separate portion of the cells express NR2F2, as compared to a population of hiPSCs that were not differentiated, thereby confirming that the hiPSCs differentiated into a mixed population of granulosa and ovarian stroma cells.
- the resulting OSCs produce steroids such as estradiol and/or progesterone upon stimulation with androstenedione and FSH or forskolin.
- steroids are confirmed via ELISA in which the steroid levels secreted in the cell media are measured with antibodies that detect the one or more steroids and compared to media from a sample with undifferentiated hiPSCs as a negative control.
- Example 3 A method of follicle stimulation for ovarian release of oocytes and in vitro maturation of oocytes
- This example demonstrates minimal follicle stimulation of a subject with a low ovarian reserve followed by oocyte harvest and in vitro maturation.
- her estradiol level is between 20 and 50 pg/mL (e.g., 20-30 pg/mL, 25-35 pg/mL, 30-40 pg/mL, 35-45 pg/mL, or 40-50 pg/mL; e.g., 20 pg/mL, 21 pg/mL, 22 pg/mL, 23 pg/mL, 24 pg/mL, 25 pg/mL, 30 pg/mL, 35 pg/mL, 40 pg/mL, 45 pg/mL, or 50 pg/mL) reaffirms the determination of the reduced ovarian reserve.
- 20 pg/mL e.g., 20-30 pg/mL, 25-35 pg/mL, 30-40 pg/mL, 35-45 pg/mL, or 40-50 pg/mL
- 20 pg/mL e
- a triggering agent e.g., 50 mg of clomiphene citrate
- administration of the triggering agent begins on or about day 5 ⁇ 1 day (e.g., day 4, day 5, or day 6) after taking her last contraceptive and continues daily for 1 to 4 days (e.g., 1 day, 2 days, 3 days, or 4 days).
- the subject’s follicle size is monitored by an ultrasound until the average follicle size reaches about 8-10 mm (e.g., 7.5 mm, 8 mm, 8.5 mm, 9mm, 9.5 mm, 10 mm, 10.5 mm, or more), upon which the oocytes (or a group of cells containing an oocyte, e.g., COCs) are retrieved from the subject by an aspiration-based methodology.
- oocyte retrieval may utilize a transvaginal ultrasound with a needle guide on the probe to suction release follicular contents.
- Oocyte-containing follicular contents are after washed with HEPES media (G-MOPS Plus, VITROLIFE®), filtered with a 70-micron cell strainer (FALCON®, Corning), and examined on a dissection microscope.
- Oocytes or a group of cells containing an oocyte, e.g., COCs
- culture dishes containing cell culture media e.g., IVM, IVF, or LAG media
- cultured COCs may be separated from their cumulus cells (and any other non-oocyte cells) in a process referred herein as oocyte denudation.
- Oocyte denudation is performed on COCs in an IVM well by mechanically disassociating cells by pipetting to remove the cumulus and/or granulosa cells. Additional oocyte denudation may be performed with an enzymatic disassociation (e.g., hyaluronidase treatment).
- COCs may be stripped with stripper tips and washed in IVM media or MOPS plus media to clean the oocyte for imaging and, if needed, to inactivate hyaluronidase. Stripper tips include 200 micron and/or 400 microns for fine cleaning.
- germinal vesical stage (GVs) and metaphase I stage (Ml) oocytes are co-cultured with about 50,000-100,000 (e.g., 50,000-60,000 cells, 60,000-70,000 cells, 70,000-80,000 cells, 80,000- 90,000 cells, or 90,000-100,000 cells; e.g., 50,000 cells, 55,000 cells, 60,000 cells, 65,000 cells, 70,000 cells, 75,000 cells, 80,000 cells, 85,000 cells, 90,000 cells, 95,000 cells, or 100,000 cells) granulosa cells (e.g., specialized granulosa cells, hiPSC-derived granulosa cells, or steroidogenic granulosa cells, as described herein).
- 50,000-100,000 e.g., 50,000-60,000 cells, 60,000-70,000 cells, 70,000-80,000 cells, 80,000- 90,000 cells, or 90,000-100,000 cells
- granulosa cells e.g., specialized granulo
- Metaphase II stage (Mil) oocytes e.g., oocytes with a polar body in the perivitelline space
- Co-culturing of oocytes and granulosa cells is for about 12-120 hours (e.g., 12-24 hours, 12-36 hours, 24-48 hours, 36-60 hours, 54-72 hours, 68-96 hours, 96-120 hours; e.g., 12 hours, 14 hours, 16 hours, 18 hours, 20 hours, 22 hours, 24 hours, 26 hours, 28 hours, 30 hours, 32 hours, 34 hours, 36 hours, 38 hours, 40 hours, 42 hours, 44 hours, 46 hours, 48 hours, 50 hours, 52 hours, 54 hours, 56 hours, 58 hours, 60 hours, 62 hours, 64 hours, 66 hours, 68 hours, 70 hours, 72 hours, 74 hours, 76 hours, 78 hours, 80 hours, 82 hours, 84 hours, 86 hours, 88 hours, 90 hours, 92 hours, 94 hours, 96 hours,
- any one or more oocytes are utilized for assisted reproduction technology (ART) procedures.
- oocytes may be utilized for intracytoplasmic sperm injection (ICSI).
- ICSI intracytoplasmic sperm injection
- Example 4 Administration of a follicular triggering agent
- This example demonstrates the administration of a triggering agent to a subject.
- a 30-year old female subject receives a blood test that detects estradiol levels between 20 and 50 pg/mL (e.g., 20-30 pg/mL, 25-35 pg/mL, 30-40 pg/mL, 35-45 pg/mL, or 40-50 pg/mL; e.g., 20 pg/mL, 21 pg/mL, 22 pg/mL, 23 pg/mL, 24 pg/mL, 25 pg/mL, 30 pg/mL, 35 pg/mL, 40 pg/mL, 45 pg/mL, or 50 pg/mL).
- 20 pg/mL e.g., 20-30 pg/mL, 25-35 pg/mL, 30-40 pg/mL, 35-45 pg/mL, or 40-50 pg/mL
- 20 pg/mL e.g
- the subject is administered multiple injections of a triggering agent over 1 to 4 days (e.g., 1 day, 2 days, 3 days, or 4 days) but no more than 5 days.
- the subject may receive multiple injections over multiple days such that a subject receives five dose injections of one or multiple triggering agents.
- a subject receives three days of stimulation using 300 IU to 700 IU of rFSH per injection (e.g., 300-500 IU, 400-600 IU, 500-700 IU, 300-350 IU, 350-400 IU, 400-450 IU, 450-500 IU, 500-550 IU, 550- 600 IU, 600-650 IU, 650-700 IU; e.g., 300 IU, 325 IU, 350 IU, 375 IU, 400 IU, 425 IU, 450 IU, 475 IU, 500 IU, 525 IU, 550 IU, 575 IU, 600 IU, 625 IU, 650 IU, 675 IU, or 700 IU) with one or more injections per day.
- 300 IU to 700 IU of rFSH per injection e.g., 300-500 IU, 400-600 IU, 500-700 IU, 300-350 IU, 350-400 IU, 400-450 IU, 450
- the subject receives injections of hCG as a triggering agent using 200-700 pg or 2,500-10,000 IU hCG (e.g., 200-500 pg, 300-600 pg, 400-700 pg, 200-300 pg, 300-400 pg, 400-500 pg, 500-600 pg, or 600-700 pg).
- 200-700 pg or 2,500-10,000 IU hCG e.g., 200-500 pg, 300-600 pg, 400-700 pg, 200-300 pg, 300-400 pg, 400-500 pg, 500-600 pg, or 600-700 pg.
- the subject receives one or more (e.g., 1 , 2, 3, 4, or 5) doses of clomiphene citrate at 50-150 mg (e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110-130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg) per dose.
- 50-150 mg e.g., 50-75 mg, 60-80 mg, 75-100 mg, 90-115 mg, 110-130 mg, 125-150 mg; e.g., 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 110 mg, 120 mg, 130 mg, 140 mg, 150 mg
- Example 5 Materials and Methods for Examples 6 through 8
- OSCs human ovarian support cells
- hiPSCs human induced pluripotent stem cells
- IVM in vitro maturation
- OSCs ovarian support cells
- hiPSCs human induced pluripotent stem cells
- COCs cumulus oocyte complexes
- the OSC-IVM culture condition was composed of 100,000 OSCs in suspension culture with human chorionic gonadotropin (hCG), recombinant follicle stimulating hormone (rFSH), androstenedione and doxycycline supplementation. IVM controls lacked OSCs and contained the same supplementation or only FSH and hCG.
- OSC-IVM metaphase II (Mil) formation rate and morphological quality assessment.
- a limited cohort of oocytes were additionally utilized for fertilization and blastocyst formation with PGT-A analysis.
- OSC-IVM resulted in a statistically significant improvement in Mil formation rate compared to the media only control.
- OSC-IVM resulted in a statistically significant improvement in Mil formation rate compared to a commercially available IVM control.
- Oocyte morphological quality between OSC-IVM and controls did not significantly differ.
- OSC-IVM improved maturation, fertilization, cleavage, blastocyst formation, high quality blastocyst formation and euploid blastocyst formation compared to the commercially available IVM control.
- OSC-IVM platform is an effective tool for maturation of human oocytes obtained from abbreviated gonadotropin stimulation cycles, yielding improved blastocyst formation.
- OSC- IVM shows broad utility for different stimulation regimens, including hCG triggered truncated IVF and untriggered traditional IVM cycles making it a highly useful tool for modern fertility treatment.
- COCs Cumulus Oocyte Complexes
- Subjects were enrolled in the study through Ruber Clinic (Madrid, Spain), Spring Fertility Clinic (New York, USA) and Pranor Clinic (Lima, Peru) using informed consent (CNRHA 47/428973.9/22, IRB # 20225832, Western IRB, and Protocol #GC-MSP-01 respectively). Subject ages ranged between 19 and 37 years of age. Oocytes retrieved from the Ruber and Pranor clinics were utilized for maturation analysis endpoints only, while oocytes retrieved from Spring Fertility were utilized for embryo formation endpoints.
- aspirations were performed 36 hours after trigger injection (10,000 IU hCG) or 48 hours after last rFSH injection for untriggered cycles.
- Aspiration was performed without follicular flushing using a single lumen 19- or 20-gauge needle with a vacuum pump suction (-200 mm Hg) used to harvest follicular contents through the aspiration needle and tubing into a 15 mL round bottom polystyrene centrifuge tube.
- a vacuum pump suction -200 mm Hg
- OSCs were created from human induced pluripotent stem cells (hiPSCs) according to transcription factor (TF)-directed protocols.
- the OSCs were produced in multiple batches and cryopreserved in vials of 120,000 to 150,000 live cells each and stored in liquid nitrogen in CryoStor CS10 Cell Freezing Medium (STEMCELL TECHNOLOGIES®).
- Culture dishes (4+8 Dishes, BIRR) for oocyte maturation experiments were prepared with culture medium and additional constituents in 100 pL droplets under mineral oil the day before oocyte collection. The morning of oocyte collection, cryopreserved OSCs were thawed for 2-3 minutes at 37°C (in a heated bead or water bath), resuspended in OSC-IVM medium and washed twice using centrifugation and pelleting to remove residual cryoprotectant. Equilibrated OSC-IVM media was used for final resuspension.
- OSCs were then plated at a concentration of 100,000 OSCs per 100 pL droplet by replacing 50 pL of the droplet with 50 pL of the OSC suspension 2-4 hours before the addition of oocytes to allow for culture equilibration and media conditioning. iv. In vitro maturation
- OSC activity The purpose of this comparison was to determine whether the stimulated OSCs were the active ingredient of the co-culture system.
- medium in experimental and control conditions was prepared by following Medicult manufacturer’s recommendations, and further supplemented with androstenedione and doxycycline (both necessary for activation/stimulation of OSCs) in order to compare maturation outcomes with or without OSCs in the same medium formulation (see Table 2 below).
- Example 1 We collected 132 oocytes from 25 subjects (average age of 25) who underwent abbreviated gonadotropin stimulation, with 49 utilized in OSC-IVM co-culture, and 83 utilized in control culture. Co-culture in the Experimental and Control Conditions was performed in parallel when possible. COCs were distributed equitably when performed in parallel. Equitable distribution means that COCs with distinctly large cumulus masses, small cumulus masses, or expanded cumulus masses were distributed as equally as possible between the two conditions. Other than the selective distribution of the distinct COC sizes, the COCs were distributed as randomly as possible between one to two conditions.
- COCs were subjected to these in vitro maturation conditions at 37°C for a total of 24-28 hours in a tri-gas incubator with CO2 adjusted so that the pH of the bicarbonate-buffered medium was 7.2-7.3 and with the O2 level maintained at 5%.
- Example 2 For the IVM outcome endpoint, 21 subjects were recruited for the comparison. We collected 143 COCs included in the comparison, allocating 70 utilized in IVM control and 73 utilized in the OSC-IVM condition. Co-culture in the Experimental and Control Conditions was performed in parallel for all subjects. COCs were distributed equitably between the two conditions, as described above. COCs were subjected to these in vitro maturation conditions at 37°C for a total of 28 hours in a tri-gas incubator with CO2 adjusted so that the pH of the bicarbonate-buffered medium was 7.2- 7.3 and with the O2 level maintained at 5%.
- COCs were subjected to these in vitro maturation conditions at 37°C for a total of 28 hours in a tri-gas incubator with CO2 adjusted so that the pH of the bicarbonate-buffered medium was 7.2-7.3 and with the O2 level maintained at 5%. Embryo formation proceeded in parallel, with groups kept separate, with culture proceeding no longer than day 7 post-IVM, v. Assessment of in vitro maturation
- COCs were subjected to hyaluronidase treatment to remove surrounding cumulus and corona cells.
- hyaluronidase treatment cumulus cells were banked for future analysis and oocytes were assessed for maturation state according to the following criteria:
- GV - presence of a germinal vesicle, typically containing a single nucleolus within the oocyte.
- Ml absence of a germinal vesicle within the oocyte and absence of a polar body in the perivitelline space between the oocyte and the zona pellucida.
- oocytes were harvested from culture dishes and stripped of cumulus cells and OSCs, assessed for maturation assessment, then individually imaged using digital photomicrography. After imaging, oocytes were flash frozen in 0.2 mL PCR tubes prefilled with 5 pL DPBS. The images were later scored according to the Total Oocyte Score (TOS) grading system. Oocytes were scored by a single trained embryologist and given a score of -1 , 0, 1 for each of the following criteria: morphology, cytoplasmic granularity, perivitelline space (PVS), zona pellucida (ZP) size, polar body (PB) size, and oocyte diameter.
- TOS Total Oocyte Score
- oocytes used only for evaluation of oocyte maturation, oocytes were snap frozen following assessment of in vitro maturation and any further morphology scoring. Snap freezing was performed by placing each oocyte in a 0.25 mL PCR tube with 5 pL DPBS. After capping the tube, it was submerged in liquid nitrogen until all bubbling ceased. Then the PCR tube was stored at -80°C for future molecular analysis.
- oocytes used to create embryos matured oocytes were immediately utilized for intracytoplasmic sperm injection (ICSI) and subsequent embryo formation to the blastocyst stage. No oocytes from this study were utilized for transfer, implantation, or reproductive purposes. v/77. In vitro fertilization and embryo culture
- a cohort of six subjects was utilized for in vitro maturation and subsequent embryo formation.
- the COCs from these subjects were subjected to the conditions used in Experiment 2 (treatment with OSC co-culture with all adjuvants versus commercially available IVM treatment as the control). All COCs were cultured for 28 hours then denuded and assessed for Mil formation and micrographed. Individual oocytes in each condition were injected with sperm (intracytoplasmic sperm injection (ICSI) on day 1 post- retrieval.
- ICSI intracytoplasmic sperm injection
- the oocytes were cultured in a medium designed for embryo culture (Global Total, COOPERSURGICAL®, Bedminster, NJ) at 37°C in a tri-gas incubator with CO2 adjusted so that the pH of the bicarbonate-buffered medium was 7.2-7.3 and with the O2 level maintained at 5%. The following day they were assessed for fertilization 12 to 16 hours post-ICSI, and oocytes with one or two pronuclei were cultured until day 3. Cleaved embryos underwent laser-assisted zona perforation and were allowed to develop until the blastocyst stage.
- a medium designed for embryo culture Global Total, COOPERSURGICAL®, Bedminster, NJ
- Blastocysts were scored according to the Gardner scale then underwent trophectoderm biopsy for preimplantation genetic testing for aneuploidy (PGT-A) and cryopreservation if deemed high quality, i.e. , greater than or equal to a 3CC rating.
- Trophectoderm biopsies were transferred to 0.25 mL PCR tubes and sent to a reference laboratory (JUNO GENETICS®, Basking Ridge, NJ) for comprehensive chromosomal analysis using a single nucleotide polymorphism (SNP) based next generation sequencing (NGS) of all 46 chromosomes (pre-implantation genetic testing for aneuploidy, PGT-A).
- SNP single nucleotide polymorphism
- NGS next generation sequencing
- Oocyte maturation outcome data was analyzed using Python statistical packages pandas (1 .5.0), scipy (1 .7.3), and statsmodels (0.13.2). Maturation percentages by donor group were analyzed using linear regression as functions of the IVM environment (OSC-IVM or Media control), t-test statistics were computed comparing cell line incubation outcomes versus media control, then used to calculate p-values. Bar graphs depict mean values for each population and error bars represent standard error of the mean (SEM).
- hiPSC-derived OSCs are predominantly composed of granulosa cells and ovarian stroma cells. In response to hormonal stimulation treatment in vitro, these OSCs produce growth factors and steroids necessary for interaction with oocytes and cumulus cells.
- hiPSC-derived OSCs are functionally capable of promoting human oocyte maturation in vitro.
- OSC-IVM As a viable system to mature human oocytes in a clinical setting, we compared our OSC co-culture system against a commercially available IVM standard.
- the commercially available IVM standard was utilized as described in its clinical instructions for use, with no modification (Medicult IVM).
- Medicult IVM We performed a sibling oocyte study comparing the Mil formation rate and oocyte morphological quality after 28 hours of in vitro maturation in both systems (Materials and Methods, Experiment 2).
- OSC-IVM yielded ⁇ 1 .6x higher average Mil formation rate with 68% ⁇ 6.74% of mature oocytes across donors compared to 43% ⁇ 7.90% in the control condition (FIG.
- Example 8 Cumulus enclosed immature oocytes from abbreviated gonadotropin stimulation matured by OSC-IVM are developmentally competent for embryo formation
- OSC-IVM yielded ⁇ 1 .2X higher average MH formation rate with 60% ⁇ 15.4% of mature oocytes across donors compared to 52% ⁇ 8% in the control condition (FIG. 11 A, Table 4).
- Mature oocytes in both treatment groups were subjected to ICSI and fertilized oocytes were cultured until Day 7 of development.
- OSC-assisted Mils demonstrate a trend towards improved fertilization, cleavage, blastocyst and usable quality blastocyst formation rates as a proportion of the input COC number (52%, 52%, 40%, and 28%) compared to the commercial IVM control (38%, 38%, 24%, and 19%) (FIG. 11 A, Table 4).
- OSC-IVM oocytes fertilize and form blastocysts at an improved rate, while cleavage of fertilized oocytes is similar to the commercial IVM control.
- PGT-A results show that of the blastocysts of transferable quality generated by OSC-IVM, 100% are euploid versus 25% in the commercial IVM system. While these results are not statistically significant, likely due to the small underpowered sample size for each group, these findings demonstrate that OSC-IVM generates healthy matured oocytes with high quality developmental competency.
- OSC-IVM is capable of producing healthy, euploid embryos from abbreviated stimulation cycles at a higher rate than the commercially available IVM condition, highlighting the clinical relevance of this novel system for IVM ART practice.
- Table 4 OSC-IVM oocytes are developmentally competent for euploid embryo formation
- OSCs human ovarian support cells
- hiPSCs human induced pluripotent stem cells
- IMM in vitro maturation
- OSCs ovarian support cells
- hiPSCs human induced pluripotent stem cells
- GV denuded immature germinal vesicle
- Ml metaphase I
- the 24-28 hour OSC-IVM culture condition was composed of 100,000 OSCs in suspension culture with human chorionic gonadotropin (hCG), recombinant follicle stimulating hormone (rFSH), androstenedione and doxycycline supplementation.
- hCG human chorionic gonadotropin
- rFSH recombinant follicle stimulating hormone
- the IVM control lacked OSCs and contained the same supplementation.
- OSC-IVM resulted in a statistically significant improvement in Mil formation rate compared to the Media-IVM control. Oocyte morphological quality between OSC- IVM and the Media-IVM control did not significantly differ. OSC-IVM resulted in Mil oocytes with no instance of spindle absence and no significant difference in position compared to in vivo matured Mil controls. OSC-IVM treated Mil oocytes display a transcriptomic maturity signature significantly more similar to IVF-MII controls than the Media-IVM control Mil oocytes. /. Collection of Immature Oocytes
- oocyte donor subjects Forty-seven oocyte donor subjects were enrolled in the study using informed consent (IRB# 20222213, Western IRB). Subject ages ranged between 25 and 45 years of age, with an average age of 35. Oocytes were retrieved at several in vitro fertilization and egg freezing clinics in New York City (IRB# 20222213, Western IRB). Fertility patients providing discarded immature oocytes had signed informed consents, provided by the clinic, permitting their use for research purposes.
- GnRH gonadotropin releasing hormone
- FSH gonadotropin releasing hormone
- hCG human menopausal gonadotropin
- GnRH agonist human Chorionic Gonadotropin
- immature (GV and Ml) oocytes from similar IVF and egg freezing cycles were vitrified and stored at the clinics.
- Cryopreserved oocytes were transported from the clinic to our laboratory in liquid nitrogen and stored until use. Oocytes were then thawed using the standard Kitazato protocol for vitrified or slow frozen oocytes (VITROLIFE®, USA), evaluated for maturation status as GV or Ml, and used for comparisons of in vitro maturation conditions.
- MH oocytes obtained from conventional controlled ovarian hyperstimulation which were previously banked for research purposes, were provided as controls for this study (IVF-MII). These oocytes were transferred to our laboratory from the tissue repository and thawed using either the standard Kitazato protocol for vitrified oocytes (KITAZATOTM, USA) or slow freeze-thaw protocol for previously slow frozen oocytes (VITROLIFE®, USA) and utilized for live fluorescent imaging and transcriptomic analysis.
- Kitazato protocol for vitrified oocytes KITAZATOTM, USA
- VITROLIFE® slow freeze-thaw protocol for previously slow frozen oocytes
- OSCs Human induced pluripotent stem cell (hiPSC) derived OSCs were created according to transcription factor (TF)-directed protocols described previously. OSCs were produced in multiple batches and cryopreserved in vials of 120,000 to 150,000 cells each and stored in the vapor phase of liquid nitrogen in CryoStorTM CS10 Cell Freezing Medium (STEMCELL TECHNOLOGIES®). Culture dishes (4+8 Dishes, BIRR) for oocyte maturation experiments were prepared with culture medium and additional constituents in 100pL droplets under mineral oil (LifeGuard, LIFEGLOBAL GROUP®) the day before oocyte collection.
- TF transcription factor
- OSCs were thawed for 2-3 minutes at 37°C (in a heated bead or water bath), resuspended in OSC-IVM medium and washed twice using centrifugation and pelleting to remove residual cryoprotectant. Equilibrated OSC-IVM medium was used for final resuspension. OSCs were then plated at a concentration of 100,000 OSCs per 100 pL droplet by replacing 50 pL of the droplet with 50 pL of the OSC suspension 2-4 hours before the addition of oocytes to allow for culture equilibration and culture medium conditioning (FIG. 12A). OSCs were cultured in suspension culture surrounding the denuded oocytes in the microdroplet under oil. IVM culture proceeded for 24 to 28 hours, after which oocytes were removed from culture, imaged, and harvested for molecular analysis.
- Immature oocytes were maintained in preincubation LAG Medium (Medicult, COOPERSURGICAL®) at 37°C for 2-3 hours after retrieval prior to introduction to in vitro maturation conditions (either Media-IVM or OSC-IVM).
- OSC activity The purpose of this comparison was to determine whether the stimulated OSCs were the active ingredient or contributor to the co-culture system.
- medium in both experimental and control condition was prepared by following Medicult manufacturer’s recommendations, and further supplemented with androstenedione and doxycycline (both necessary for activation/stimulation of OSCs) in order to compare maturation outcomes with or without OSCs in the same medium formulation (see Table 5 below).
- Donated oocytes were retrieved from 56 patients and pooled into 29 independent cultures, totaling 141 oocytes, with 82 oocytes utilized in OSC-IVM and 59 oocytes utilized in Media-IVM. Culture in the Experimental and Control Conditions was performed in parallel when possible. Immature oocytes from each donor pool were distributed equitably between two conditions at a time, with no more than 15 oocytes per culture at a time. Specifically, immature oocytes (GV and Ml) were distributed as equally and randomly as possible between the two conditions. Due to low and highly variable numbers of available immature oocytes which were provided as discard donation, both conditions often could not be run in parallel from the same oocyte donation source often.
- Immature oocytes were subjected to in vitro maturation at 37°C for a total of 24-28 hours in a tri-gas incubator with CO2 adjusted so that the pH of the bicarbonate-buffered medium was 7.2-7.3 and with the O2 level maintained at 5%. iv. Assessment of in vitro maturation
- oocytes were harvested from culture dishes and mechanically denuded and washed of any residual OSCs. Oocytes were then individually assessed for maturation state according to the following criteria:
- GV - presence of a germinal vesicle, typically containing a single nucleolus within the oocyte.
- Ml absence of a germinal vesicle within the oocyte and absence of a polar body in the perivitelline space between the oocyte and the zona pellucida.
- Oocyte morphology scoring Following assessment of in vitro maturation and morphology scoring, oocytes were individually imaged using digital photomicrography and if required, examined by fluorescent imaging for the second meiotic metaphase spindle. No oocytes from this study were utilized for embryo formation, transfer, implantation, or reproductive purpose. v. Oocyte morphology scoring
- Previously vitrified denuded immature oocytes were thawed and equitably distributed across OSC-IVM and Media-IVM conditions before being cultured for 28 hours. Additional donated MH oocytes were collected and stained to visualize the microtubules of the meiotic spindle apparatus by fluorescent microscopy as an IVF control (IVF-MII) (FIG. 14A-B). Mil oocytes were incubated in 2 pM of an alphatubulin dye (ABBERIORTM Live AF610) for one hour in the presence of 10 pM verapamil (ABBERIORTM Live AF610).
- oocytes were individually placed in 0.25 mL tubes containing 5 pL Dulbecco’s Phosphate Buffered Saline (DPBS) and snap frozen in liquid nitrogen. After the cessation of nitrogen bubble formation the tubes were stored at -80°C until subsequent molecular analysis. viii. Single oocyte transcriptomics library preparation and RNA sequencing
- RNA sequencing were generated using the NEBNEXTTM Single Cell/Low Input RNA Library Prep Kit for ILLUMINA® (NEB #E6420) in conjunction with NEBNEXTTM Multiplex Oligos for ILLUMINA® (96 Unique Dual Index Primer Pairs) (NEB #E6440S), according to the manufacturer’s instructions. Briefly, oocytes frozen in 5 pL DPBS and stored at -80°C were thawed and lysed in lysis buffer, then RNA was processed for reverse transcriptase and template switching. cDNA was PCR amplified with 12-18 cycles, then size purified with KAPATM Pure Beads (Roche). cDNA input was normalized across samples.
- NEBNEXTTM Unique Dual Index Primer Pair adapters were ligated, and samples were enriched using 8 cycles of PCR.
- Libraries were cleaned up with KAPATM Pure Beads, quantified using Quant-iT PicoGreen dsDNA Reagent and Kit (Invitrogen), then an equal amount of cDNA was pooled from each oocyte library. The pool was subjected to a final KAPATM Pure bead size selection if required and quantified using Qubit dsDNA HS kit (Invitrogen).
- ILLUMINA® sequencing files (bcl-files) were converted into fastq read files using Illumina® bcl2fastq (v2.20) software deployed through BaseSpace using standard parameters for low input RNA- seq of individual oocytes.
- Low input RNA-seq data gene transcript counts were aligned to Homo sapiens GRCH38 (v 2.7.4a) genome using STAR (v 2.7.1 Oa) to generate gene count files and annotated using ENSEMBL. Gene counts were combined into sample gene matrix files (h5). Computational analysis was performed using data structures and methods from the Scanpy (v 1 .9.1 ) package as a basis. Gene transcript counts were normalized to 10,000 per sample and log (In) plus 1 transformed.
- Oocyte maturation outcome data was analyzed using Python statistical packages pandas (1 .5.0), scipy (1 .7.3), and statsmodels (0.13.2). Maturation percentages by donor group were analyzed using linear regression as functions of the IVM environment as OSC-IVM or Media-IVM. t-test statistics were computed comparing OSC-IVM versus Media-IVM, then used to calculate p-values using Welch's correction for unequal variance. One way ANOVA was utilized for comparisons of more than two groups for spindle apparatus location analysis. Chi-squared analysis was utilized for comparison of the Leiden group population make up in transcriptomic analysis for the three sample conditions. Bar graphs depict mean values for each population and error bars represent standard error of the mean (SEM).
- hiPSC-derived OSCs are predominantly composed of granulosa cells and ovarian stroma cells.
- these OSCs produce growth factors and steroids, and express adhesion molecules necessary for interaction with oocytes and cumulus cells.
- hiPSC-derived OSCs are functionally capable of promoting human oocyte maturation in vitro, as an approach to rescue immature denuded oocytes, we established a co-culture system of these cells with freshly retrieved denuded immature oocytes and assessed maturation rates after 24-28 hours (FIG. 12).
- Example 11 OSC-IVM promotes high quality assembly of the second meiotic spindle apparatus in IVM oocytes
- Second meiotic spindle assembly has been implicated in previous studies as a key indicator of oocyte quality in relation to fertilization and developmental competence, with the presence of a spindle with a smaller angle relative to the PB1 as an indicator of improved quality.
- IVF-MII Mil oocytes retrieved from IVF cycles
- FIG. 14A We also included as a control the oocytes that spontaneously matured in the Media-IVM condition.
- OSC-IVM promotes maturation of MH oocytes with high transcriptomic similarity compared to in vivo matured MH oocytes
- Mil oocytes retrieved from IVF show close grouping together with Mil from both the OSC-IVM, as well as Media-IVM.
- GVs from OSC-IVM and Media-IVM show close distance among each other and apart from the Mil oocytes.
- Ml oocytes were scattered among both groups, likely a consequence of being an intermediate maturation state and being present in very low numbers in comparison with the other two maturation states (GVs and Mils).
- clusters 0, 2, and 3 within the Mil oocytes population, and one cluster (1 ) comprised mostly GVs.
- the GV maturation signature was strongly represented in cluster 1 .
- the MH maturation signature included Mils from both IVF and IVM, and it was more overrepresented in clusters 0 and 2.
- cluster 1 represents the (GV) failed maturation transcriptomic profile
- clusters 0 and 2 represent a profile similar to the IVF MH maturation transcriptomic profile.
- cluster 3 shows lower expression for both the IVF Mil and IVM GV failed maturation signatures. This could indicate a transitional state between immature and mature development in which neither signature is highly upregulated, or could result from cell activity stasis, shutdown, or oocyte stalling.
- FIG. 15C we assess the quality of individual oocytes relative to our IVF Mil maturation signature (y-axis), as well as the IVM GV failed maturation signature (x-axis). For visual clarity we divide our signature dimension plot into labeled quadrants which help denote the separation between classification groups. As expected, we observe that most of the oocytes morphologically classified as GVs clustered in the lower right quadrant (IV), holding a high score for GV failed maturation signature along with a low score for IVF Mil maturation signature. In contrast, individual oocytes from the IVF-MII condition clustered together (-91%) in the upper left quadrant (I), holding a high score for Mil maturation signature and a low score for GV failed maturation signature.
- OSC-IVM Mils (blue cross) were found mostly (-79%) in the upper left quadrant (I) along with the IVF-MII oocytes, suggesting a strong transcriptomic similarity between these two groups.
- Mils from the Media-IVM were often (-46%) located on the lower left quadrant (III) depicting a low score for both Mil maturation signature and GV maturation signature.
- this lower left quadrant (III) comprises in its majority cells derived from cluster 3, which despite their weak Mil maturation signature, were morphologically classified as Mils. This divergence in morphological classification and transcriptomic profile suggests that these oocytes are in a low activity state, possibly as a transitional phase before maturation or a holding state.
- hPGCLCs human primordial germ cell-like cells
- PGCs premigratory primordial germ cells
- DAZL gonadal PGC markers
- This process has recently been recreated in vitro using mouse fetal ovarian somatic cells, which allowed the development of hPGCLCs to the oogonia-like stage.
- the fraction of OCT4+ cells declined after day 8.
- the fraction of OCT4+ cells also declined over time.
- DAZL+OCT4- cells were also apparent (FIG. 16E) in addition to DAZL+OCT4+ cells, and past day 38 there were more DAZL+ cells than OCT4+ cells in total (FIG. 16C).
- FIG. 17A Follicle-like structure formation was first visible at day 16 (FIG. 16E), and at day 26 the largest of these structures had grown to 1-2 mm diameter (FIG. 17B). At day 70, ovaroids had developed follicles of a variety of sizes, mainly small single-layer follicles (FIG. 17C) but also including antral follicles (FIG. 17D).
- cluster 1 A smaller cluster (cluster 1 ) expressing the ovarian stromal marker NR2F2 was also present.
- NR2F2 is expressed by both stromal and theca cells, but the cells in cluster 1 did not express 17a-hydroxylase (CYP17A1 ), indicating that they could not produce androgens and were not theca cells.
- X-chromosomal IncRNAs XIST, TSIX, and XACT were all more highly expressed (an average of —80-, -20-, and -2900- fold, respectively) in the hPGCLCs relative to other clusters (FIG. 18B), suggesting that the hPGCLCs were starting the process of X-reactivation, which in hPGCs is associated with high expression of both XIST and XACT.
- the X-chromosomal HPRT1 gene known to be more highly expressed in cells with two active X chromosomes, was also ⁇ 3-fold upregulated.
- neural, immune, smooth muscle, and erythroid cells which were present in fetal ovaries, were completely absent from our ovaroids.
- Epithelial, endothelial, and perivascular cells were detected, but at very low frequency (1% or less), possibly representing a low rate of off-target differentiation.
- Preclinical trials of the OSCs-IVM system were performed using cell culture media-matched controls in a sibling oocyte study for both human denuded immature oocytes retrieved after standard of care gonadotropin stimulation, and intact immature COCs retrieved after minimal gonadotropin stimulation.
- the control condition contained an identical media formulation as the OSCs-IVM condition, with the only difference between conditions being the presence of the OSCs in the OSC-IVM.
- Results show that the OSCs-IVM system statistically significantly improved oocyte maturation rate, determined by the presence of a polar body, by ⁇ 15% with denuded oocytes from standard of care (FIG. 19A) and by -17% in intact COCs from minimal stimulation (FIG.
- OSCs-IVM were compared to the clinically approved Medicult-IVM system, which is marketed for use with intact COCs after minimal stimulation. OSC-IVM statistically significantly improves oocyte maturation rates by -28% on average per study donor, compared to Medicult-IVM in an on-label, sibling oocyte study (FIG. 19C).
- oocyte quality While no universally accepted method exists yet to determine “oocyte quality”, studies have shown that certain morphological and molecular features can be used to infer oocyte quality, as these features are correlated with improvements in embryo formation and live birth rates in IVF.
- One such measure is a total oocyte score (TOS) generated from manual qualitative assessment of six morphological features of mature oocytes: oocyte size, zona size, color/shape, cytoplasmic granularity, polar body quality, and PVS quality.
- TOS total oocyte score
- spindle assembly position Another metric of quality is spindle assembly position, which has been shown as a reliable metric of oocyte quality by measuring the angle between polar body 1 (PB1 ) and the spindle apparatus, with a decrease in angle correlated with an improvement in oocyte quality.
- PB1 polar body 1
- certain genetic markers identified in transcriptomic analysis have been correlated with oocyte quality, measuring indications such as oxidative stress, embryogenesis competence, and DNA damage. All three of these metrics were employed here to determine if OSCs-IVM could improve oocyte quality relative to media matched controls.
- OSCs-IVM were likewise shown to on average decrease the angle between the PB1 and spindle compared to media-matched controls and IVF in vivo Mils, with no instance of spindle absence in OSCs-IVM Mils (FIG. 20B). Additionally, through differential gene expression analysis (DGEA), it was evidenced that the OSCs-IVM oocytes show high similarity to in vivo Mil oocytes, with expected expression of key embryogenesis competence genes (FIG. 20C-D).
- DGEA differential gene expression analysis
- both human and porcine animal models were studied to determine toxicity of the OSCs co-culture.
- the OSCs-IVM condition was performed and assessed for oocyte outcomes considered as “degraded”, meaning the oocytes are undergoing a rapid state of apoptosis or cell death.
- the OSCs-IVM results in no significant enhancement in oocyte degradation rate in human oocytes compared to the Medicult-IVM media alone (FIG.21 A).
- porcine oocytes matured in the presence of the OSC-IVM product were capable of forming blastocysts.
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