WO2024260445A1 - Thiazolidinedione compound and pharmaceutical composition and use thereof - Google Patents
Thiazolidinedione compound and pharmaceutical composition and use thereof Download PDFInfo
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- WO2024260445A1 WO2024260445A1 PCT/CN2024/100620 CN2024100620W WO2024260445A1 WO 2024260445 A1 WO2024260445 A1 WO 2024260445A1 CN 2024100620 W CN2024100620 W CN 2024100620W WO 2024260445 A1 WO2024260445 A1 WO 2024260445A1
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/41—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
- A61K31/425—Thiazoles
- A61K31/427—Thiazoles not condensed and containing further heterocyclic rings
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
- A61K31/44—Non condensed pyridines; Hydrogenated derivatives thereof
- A61K31/4427—Non condensed pyridines; Hydrogenated derivatives thereof containing further heterocyclic ring systems
- A61K31/4439—Non condensed pyridines; Hydrogenated derivatives thereof containing further heterocyclic ring systems containing a five-membered ring with nitrogen as a ring hetero atom, e.g. omeprazole
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
- A61K31/47—Quinolines; Isoquinolines
- A61K31/472—Non-condensed isoquinolines, e.g. papaverine
- A61K31/4725—Non-condensed isoquinolines, e.g. papaverine containing further heterocyclic rings
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
- A61P35/02—Antineoplastic agents specific for leukemia
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D417/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00
- C07D417/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings
- C07D417/06—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
Definitions
- the present invention belongs to the field of biomedicine, and specifically relates to a thiazolidinedione compound, a pharmaceutical composition thereof and a use thereof.
- the present invention provides a use of a compound as shown in formula I or a pharmaceutically acceptable salt thereof in the preparation of a DNA methyltransferase 3A (DNMT3A) inhibitor.
- DNMT3A DNA methyltransferase 3A
- n 1, 2, 3, 4 or 5;
- X1 and X2 are independently O or S;
- Ring A is a C 6-10 aromatic ring or a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- L is a C 6-10 aryl substituted by one or more R L-1 , a 3-10 membered heterocycloalkenyl substituted by one or more R L-2 , a C 1-6 heteroalkyl substituted by one or more R L-3 , or a benzo 3-10 membered heterocycloalkenyl substituted by one or more R L-4 ; the 3-10 membered heterocycloalkenyl
- the heteroatoms of the benzo-3-10 membered heterocycloalkenyl group, the C 1-6 heteroalkyl group and the 3-10 membered heterocycloalkenyl group are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3;
- each of RL -1-1 and RL-1-2 is independently C1-6 alkyl, C6-10 aryl, C1-6 alkyl substituted by one or more RL-1-1-1 , or C6-10 aryl substituted by one or more RL-1-1-2 ;
- Each of RL-1-1-1 and RL -1-1-2 is independently C1-6 alkyl, C1-6 alkoxy, nitro or C2-6 alkynyl.
- the C 1-6 alkyl group is methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl, for example, methyl.
- the C 1-6 alkoxy group is methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, sec-butoxy, isobutoxy or tert-butoxy, such as methoxy.
- the C 6-10 aromatic ring is a benzene ring or a naphthalene ring, such as a benzene ring.
- ring A is a C 6-10 aromatic ring, for
- the heteroatom of the 5-10 membered heteroaromatic ring is O, and the number of heteroatoms is 1, 2 or 3; for example, the heteroatom is O, and the number of heteroatoms is 1.
- the 5-10 membered heteroaromatic ring is a 5-6 membered heteroaromatic ring, such as a furan ring.
- ring A is a 5-10 membered heteroaromatic ring
- the C 6-10 aryl group in the C 6-10 aryl group substituted by one or more R L-1 is phenyl or naphthyl, for example phenyl.
- the number of double bonds in the 3-10 membered heterocycloalkenyl group substituted by one or more R L-2 and the 3-10 membered heterocycloalkenyl group in the benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 is independently 1, 2 or 3, for example 2.
- the heteroatom of the 3-10 membered heterocycloalkenyl substituted by one or more RL -2 and the 3-10 membered heterocycloalkenyl in the benzo 3-10 membered heterocycloalkenyl substituted by one or more RL -4 is N, and the number of heteroatoms is 1, 2 or 3; for example, the heteroatom is N, and the number of heteroatoms is 1.
- the 3-10 membered heterocycloalkenyl group in the 3-10 membered heterocycloalkenyl group substituted by one or more R L-2 is for example
- the benzo 3-10 membered heterocycloalkenyl group in the benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 is for example
- the heteroatom of the C1-6 heteroalkyl group substituted by one or more RL -3 is selected from one or two of N, O and S, and the number of heteroatoms is 1, 2 or 3; for example, the heteroatom is selected from one or two of N and O, and the number of heteroatoms is 2; for another example, the heteroatom is N and O, and the number of heteroatoms is 2.
- the C 1-6 heteroalkyl group in the C 1-6 heteroalkyl group substituted by one or more RL-3 is a straight-chain heteroalkyl group.
- the C 1-6 heteroalkyl group in the C 1-6 heteroalkyl group substituted by one or more RL-3 is a C 1-4 heteroalkyl group, for example
- the C1-6 alkyl group is independently methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl, such as methyl.
- the heteroatom of the 5-10 membered heteroaryl is independently N, and the number of heteroatoms is independently 1, 2 or 3; for example, the heteroatom is N, and the number of heteroatoms is 1.
- the 5-10 membered heteroaryl group is independently a 5-6 membered heteroaryl group, for example, independently a pyridyl group, for example
- the C1-6 alkyl group and the C1-6 alkyl group substituted by one or more RL-1-1-1 are independently methyl, ethyl, n - propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl; for example, methyl, ethyl, n-propyl or isobutyl.
- the C6-10 aryl group and the C6-10 aryl group substituted by one or more RL-1-1-2 are independently phenyl or naphthyl, for example phenyl.
- each plurality is independently 2 or 3.
- the C1-6 alkyl group is independently methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl, for example methyl.
- the C1-6 alkoxy group is independently methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, sec-butoxy, isobutoxy or tert-butoxy, for example methoxy.
- the C2-6 alkynyl group is independently ethynyl, propynyl or butynyl, for example
- n 1 or 2.
- X1 is O.
- X2 is O or S.
- ring A is a 5-6 membered heteroaromatic ring; the heteroatom of the 5-6 membered heteroaromatic ring is selected from one of N, O and S. There are 1, 2 or 3 heteroatoms.
- L is a C 6-10 aryl group substituted by one or more RL-1 , a 3-10 membered heterocycloalkenyl group substituted by one or more RL-2 , or a benzo 3-10 membered heterocycloalkenyl group substituted by one or more RL-4 ; preferably, L is a C 6-10 aryl group substituted by one or more RL-1 , a 5-6 membered heterocycloalkenyl group substituted by one or more RL-2, or a benzo 5-6 membered heterocycloalkenyl group substituted by one or more RL -4 , and the heteroatom of the 5-6 membered heterocycloalkenyl group and the 5-6 membered heterocycloalkenyl in the benzo 5-6 membered heterocycloalkenyl is N, and the number of heteroatoms is 1, 2 or 3.
- the C 6-10 aryl group substituted by one or more R L-1 is
- each RL-1 is independently a carboxyl group
- each RL-1 is independently a carboxyl group or Preferably
- each RL-1-1 is independently a C1-6 alkyl group or a C1-6 alkyl group substituted by one or more RL-1-1-1 groups .
- each RL-1-2 is independently a C 1-6 alkyl group or a C 1-6 alkyl group substituted by one or more RL-1-1-1 ; preferably, it is a C 1-6 alkyl group substituted by one or more RL-1-1-1 .
- each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl.
- each RL -1-1-1 is independently a C2-6 alkynyl group.
- each RL-1-1-2 is independently C1-6 alkyl, C1-6 alkoxy or nitro.
- the 3-10 membered heterocycloalkenyl substituted by one or more R L-2 is
- each RL -2 is oxo.
- the C 1-6 heteroalkyl substituted by one or more R L-3 is
- each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of the heteroatoms is 1, 2 or 3.
- each RL -3 is independently a C1-6 alkyl group or a 5-6 membered heteroaryl group, wherein the heteroatoms of the 5-6 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of the heteroatoms is 1, 2 or 3.
- the benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 is
- each RL -4 is oxo.
- each RL -1 is independently For example
- each RL -1 is independently For example
- each RL -1 is independently
- ring A is Preferably, for Preferably,
- L is Preferably, L is
- L is More preferably,
- n 1 or 2;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- Ring A is a C 6-10 aromatic ring or a 5-10 membered heteroaromatic ring; the heteroatom of the 5-10 membered heteroaromatic ring is selected from one or more of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- L is a C 6-10 aryl substituted by one or more R L-1 , a 3-10 membered heterocycloalkenyl substituted by one or more R L-2 , a C 1-6 heteroalkyl substituted by one or more R L-3 , or a benzo 3-10 membered heterocycloalkenyl substituted by one or more R L-4 ;
- the heteroatoms of the 3-10 membered heterocycloalkenylene and the C 1-6 heteroalkyl are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3;
- Each RL -1 is independently a carboxyl group
- Each RL -2 is oxo
- Each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- Each RL -4 is oxo
- Each RL -1-1 is independently C1-6 alkyl or C1-6 alkyl substituted by one or more RL -1-1-1 ;
- each RL -1-2 is independently C1-6 alkyl, 6-10 membered aryl, C1-6 alkyl substituted with one or more RL-1-1-1 , or 6-10 membered aryl substituted with one or more RL -1-1-2 ;
- Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl;
- Each RL -1-1-2 is independently C1-6 alkyl, C1-6 alkoxy or nitro.
- Ring A is a C 6-10 aromatic ring.
- ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3.
- ring A is a C 6-10 aromatic ring; and L is a C 1-6 heteroalkyl group substituted by one or more RL -3 groups .
- ring A is a 5-10 membered heteroaromatic ring
- L is a C 6-10 aryl group substituted by one or more R L-1
- each R L-1 is
- ring A is a 5-10 membered heteroaromatic ring
- L is a C 6-10 aryl group substituted by one or more R L-1
- each R L-1 is
- ring A is a 5-10 membered heteroaromatic ring
- L is a 3-10 membered heterocycloalkenyl substituted by one or more RL-2 or a benzo 3-10 membered heterocycloalkenyl substituted by one or more RL -4
- the heteroatoms of each 3-10 membered heterocycloalkenylene group are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3.
- the compound as shown in formula I is any of the following embodiments:
- n 1 or 2;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- Ring A is a C 6-10 aromatic ring
- L is a C 1-6 heteroalkyl group substituted by one or more R L-3 ;
- the heteroatoms of the C 1-6 heteroalkylene group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- Each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatom of the 5-10 membered heteroaryl group is selected from N, O and S.
- One, two or three kinds of heteroatoms, the number of heteroatoms is 1, 2 or 3;
- n 1 or 2;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- Ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- L is a C 6-10 aryl group substituted by one or more R L-1 , each R L-1 being
- Each RL -1-1 is independently C1-6 alkyl or C1-6 alkyl substituted by one or more RL -1-1-1 ;
- Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl.
- n 1 or 2;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- Ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- L is a C 6-10 aryl group substituted by one or more R L-1 ; each R L-1 is
- each RL -1-2 is independently C1-6 alkyl, 6-10 membered aryl, C1-6 alkyl substituted with one or more RL-1-1-1 , or 6-10 membered aryl substituted with one or more RL -1-1-2 ;
- Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl;
- Each RL -1-1-2 is independently C1-6 alkyl, C1-6 alkoxy or nitro;
- n 1 or 2;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- Ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- L is a 3-10 membered heterocycloalkenyl group substituted by one or more R L-2 or a benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 ;
- the heteroatoms of the 3-10 membered heterocycloalkenylene group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- Each of RL-2 and RL-4 is oxo.
- n 1, 2, 3, 4 or 5;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- Ring A is a C 6-10 aromatic ring or a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- L is a C 6-10 aryl substituted by one or more R L-1 , a 3-10 membered heterocycloalkenyl substituted by one or more R L-2 , a C 1-6 heteroalkyl substituted by one or more R L-3 , or a benzo 3-10 membered heterocycloalkenyl substituted by one or more R L-4 ;
- the heteroatoms of the 3-10 membered heterocycloalkenyl, the C 1-6 heteroalkyl and the benzo 3-10 membered heterocycloalkenyl are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3;
- Each RL-1 is independently carboxyl or
- Each RL -2 is oxo
- Each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
- Each RL -4 is oxo
- Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl.
- n 1, 2, 3, 4 or 5;
- Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy
- X1 and X2 are independently O or S;
- L is a C 6-10 aryl group substituted by one or more R L-1 , a 5-6 membered heterocycloalkenyl group substituted by one or more R L-2, or a benzo 5-6 membered heterocycloalkenyl group substituted by one or more R L-4 , wherein the heteroatom of the 5-6 membered heterocycloalkenyl group and the benzo 5-6 membered heterocycloalkenyl group is N, and the number of heteroatoms is 1, 2 or 3;
- Each R L-1 is each RL-1-2 is independently a C1-6 alkyl substituted by one or more RL-1-1-1 , and each RL - 1-1-1 is independently a C2-6 alkynyl;
- Each RL -2 is oxo
- Each RL -4 is oxo.
- the compound shown in formula I is any of the following compounds:
- the DNA methyltransferase 3A inhibitor can be used in mammalian organisms; it can also be used in vitro, mainly for experimental purposes, for example: as a standard sample or control sample for comparison, or prepared into a kit according to conventional methods in the art to provide rapid detection of DNA methyltransferase 3A inhibitory effects.
- the present invention provides a compound as shown in formula I' or a pharmaceutically acceptable salt thereof,
- the present invention also provides a use of a compound as shown in Formula I or Formula I' as described in any embodiment of the present invention (in a therapeutically effective amount), a pharmaceutically acceptable salt thereof, or the above-mentioned pharmaceutical composition in the preparation of a drug for treating and/or preventing diseases related to DNA methylation.
- the disease associated with DNA methylation is overgrowth syndrome or acute myeloid leukemia.
- the acute myeloid leukemia is monocytic leukemia.
- the present invention also provides a method for preparing a drug for treating and/or preventing overgrowth syndrome or acute myeloid leukemia using a compound of formula I or a pharmaceutically acceptable salt thereof or a pharmaceutical composition thereof as described in any scheme of the present invention (in a therapeutically effective amount) or a pharmaceutical composition thereof as shown in formula I' or a pharmaceutically acceptable salt thereof.
- the present invention provides a method for preventing and/or treating diseases related to DNA methylation, comprising administering to a patient a therapeutically effective amount of a compound as shown in Formula I or Formula I' as described in any embodiment of the present invention, a pharmaceutically acceptable salt thereof, or the above-mentioned pharmaceutical composition.
- the present invention provides a method for preventing and/or treating overgrowth syndrome or acute myeloid leukemia, comprising administering to a patient a therapeutically effective amount of a compound as shown in Formula I or Formula I' as described in any scheme of the present invention, a pharmaceutically acceptable salt thereof, or the above-mentioned pharmaceutical composition.
- pharmaceutically acceptable means that salts, solvents, excipients, etc. are generally non-toxic, safe, and suitable for use by patients.
- pharmaceutically acceptable salt refers to a salt prepared from a compound of the present invention and a relatively nontoxic, pharmaceutically acceptable acid or base.
- a base addition salt can be obtained by contacting a neutral form of such compound with a sufficient amount of a pharmaceutically acceptable base in a pure solution or a suitable inert solvent.
- an acid addition salt can be obtained by contacting a neutral form of such compound with a sufficient amount of a pharmaceutically acceptable acid in a pure solution or a suitable inert solvent.
- the pharmaceutically acceptable acid includes an inorganic acid.
- the pharmaceutically acceptable acid includes an organic acid.
- compound and “pharmaceutically acceptable salt” may exist as single stereoisomers or mixtures thereof (eg, racemates), if stereoisomers exist.
- compound or “pharmaceutically acceptable salt” may exist in the form of a single tautomer or a mixture thereof if tautomers exist, preferably in the form in which the more stable tautomer is predominant.
- variable e.g., R 1
- the definition of the variable at each position is independent of the definitions at the remaining positions, and their meanings are independent of each other. Therefore, if a group is substituted with 1, 2, or 3 R 1 groups, that is, the group may be substituted with up to 3 R 1s , the definition of R 1 at that position is independent of the definitions of R 1 at the remaining positions.
- substituents and/or variables are allowed only if the combination results in a stable compound.
- alkyl refers to a straight or branched chain alkyl group having a specified number of carbon atoms.
- alkyl groups include methyl, ethyl, n-propyl, isopropyl, n-butyl, tert-butyl, isobutyl, sec-butyl, n-pentyl, n-hexyl, and the like.
- alkynyl refers to a straight or branched hydrocarbon group (e.g., C2 - C8 alkynyl, or C2 - C4 alkynyl) having one or more triple bonds to a specified number of carbon atoms.
- the one or more carbon-carbon triple bonds may be internal or terminal, such as propynyl with an internal triple bond. or a propynyl group with a triple bond at the terminal wait.
- alkoxy refers to a group -ORX , wherein RX is alkyl as defined above.
- heteroalkyl refers to a group in which a carbon atom at a certain position in the parent structure of a straight or branched alkyl group is replaced by a heteroatom, and has a specified number of carbon atoms (e.g., C 1 to C 6 ), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatom (one or more of N, O, and S).
- Heteroalkyl groups include, but are not limited to wait.
- aryl refers to a cyclic group consisting of only carbon atoms, having a specified number of carbon atoms (e.g., C 6-10 ), which is monocyclic or polycyclic, and each ring is aromatic (complying with Huckel's rule).
- Aryl includes, but is not limited to, phenyl and naphthyl.
- aromatic ring refers to a cyclic group consisting of only carbon atoms with a specified number of carbon atoms (e.g. C 6-10 ), which is monocyclic or polycyclic, and each ring is aromatic (complying with Huckel's rule).
- Aromatic rings include, but are not limited to, benzene rings and naphthalene rings.
- heteroaryl refers to a cyclic aromatic group having a specified number of ring atoms (e.g., 5-10 members), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatoms (1, 2, or 3 of N, O, and S). It is monocyclic or bicyclic.
- each ring is aromatic, for example, furanyl, pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, thienyl, isoxazolyl, oxazolyl, diazolyl, imidazolyl, pyrrolyl, pyrazolyl, triazolyl, tetrazolyl, thiazolyl, isothiazolyl, thiadiazolyl, benzimidazolyl, indolyl, indazolyl, benzothiazolyl, benzisothiazolyl, quinolyl, isoquinolyl, and the like.
- heteromatic ring refers to a cyclic aromatic group having a specified number of ring atoms (e.g., 5-10 members), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatoms (1, 2, or 3 of N, O, and S), which is monocyclic or bicyclic.
- each ring is aromatic, for example, furan ring, pyridine ring, pyridazine ring, pyrimidine ring, pyrazine ring, thiophene ring, isoxazole ring, oxadiazole ring, imidazole ring, pyrrole ring, pyrazole ring, triazole ring, tetrazole ring, thiazole ring, isothiazole ring, thiadiazole ring, benzimidazole ring, indole ring, indazole ring, benzothiazole ring, benzisothiazole ring, quinoline ring, isoquinoline ring and the like.
- heterocycloalkenyl refers to a cyclic group with a specified number of ring atoms (e.g., 3-10 members), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatoms (1, 2, or 3 of N, O, and S), which is a monocyclic, bridged, or spirocyclic group, and at least one of the rings contains one or more "double bonds”.
- the "heterocycloalkenyl” does not contain a closed cyclic conjugated system, but only isolated ⁇ bonds or discontinuous conjugated ⁇ bonds; for example wait.
- oxo refers to the replacement of hydrogen or lone pair electrons on non-oxygen atoms with oxygen, e.g. After being oxidized After being oxidized
- pharmaceutically acceptable excipients refers to excipients and additives used in the production of medicines and the preparation of prescriptions. It is all substances contained in pharmaceutical preparations except the active ingredients.
- treatment refers to therapeutic treatment.
- treatment means: (1) ameliorating the disease or one or more biological manifestations of the condition, (2) interfering with (a) one or more points in the biological cascade leading to or causing the condition or (b) one or more biological manifestations of the condition, (3) ameliorating one or more symptoms, effects, or side effects associated with the condition or one or more symptoms, effects, or side effects associated with the condition or its treatment, or (4) slowing the progression of the condition or one or more biological manifestations of the condition.
- prevent refers to the reduction of the risk of acquiring or developing a disease or disorder.
- terapéuticaally effective amount refers to an amount of a compound that is sufficient to effectively treat a disease or condition described herein when administered to a patient.”
- Therapeutically effective amount will vary depending on the compound, the condition and its severity, and the age of the patient to be treated, but can be adjusted as needed by those skilled in the art.
- patient refers to any animal, preferably a mammal, most preferably a human, who is about to be or has been administered the compound or composition according to the embodiments of the present invention.
- mammal includes any mammal. Examples of mammals include, but are not limited to, cows, horses, sheep, pigs, cats, dogs, mice, rats, rabbits, guinea pigs, monkeys, humans, etc., with humans being the most preferred.
- the reagents and raw materials used in the present invention are commercially available.
- the positive and progressive effects of the present invention are that the thiazolidinedione compounds provided by the present invention are designed and synthesized for the binding pocket characteristics of the MT domain substrate, and have good inhibitory activity against DNMT3A. Through in vitro biochemical and cell experiments, they are proven to have low toxicity, high inhibition rate and high specificity. These compounds can not only be used to further clarify the molecular mechanism of DNMT3A structure and its DNA methylation function, but also provide new drugs for DNA methylation-related diseases, especially cancers such as acute myeloid leukemia AML.
- Figure 1 Statistical analysis of IC50 of compounds in A549, MOLM-13 and Thp-1 cell lines (ns indicates no significance (p>0.05), * indicates p ⁇ 0.05, ** indicates p ⁇ 0.01, *** indicates p ⁇ 0.001, **** indicates p ⁇ 0.0001).
- Figure 2 Western blotting was used to identify the expression of DNMT3A protein in J1-890 and J1-890Dnmt3a-/- cell lines.
- Figure 3 Statistical analysis of compound IC50 in J1-890Dnmt3a-/- and J1-890 cell lines.
- 4x reaction buffer 80 mM Tris-HCl, pH 8.0, 200 mM NaCl, 4 mM EDTA, 12 mM MgCl2, 0.4 mg/mL BSA, 4 mM DTT.
- Tumor cell line A549 was obtained from ATCC.
- the supernatant in the wells was aspirated, and culture medium (100 ⁇ L/well) mixed with compounds (compound gradient concentration was 11.85-202.5 ⁇ M) was added, and the cells were cultured in an incubator for 24 hours.
- the Cell Counting Kit-8 (HY-K0301) was used to measure the growth inhibition of the compounds on the cell lines.
- the starting concentrations of MOLM-13 were 5*10 ⁇ 4 cells/well and 6*10 ⁇ 4 cells/well, respectively.
- the gradient diluted cells were inoculated in a 96-well plate at 100 ⁇ L/well and placed in an incubator for 72h. 10 ⁇ L CCK solution was added directly to each well. After continuing to incubate in the incubator for 30 minutes, 1h, 2h, 3h, and 4h, the absorbance at 450nm (hereinafter referred to as OD450 value) was measured with an enzyme reader, and a standard curve was drawn.
- the inoculation amount of each well of the two cell lines was determined to be 10,000 cells and 5,000 cells according to the standard curve, and the CCK-8 incubation time was 1h.
- Thp-1 and MOLM-13 proliferation inhibition rate Slightly different from the A549 cell line, since it is inconvenient to change the medium of suspended cells, we selected a cell-free gradient concentration compound group (denoted as the pure compound control group) as the drug background control.
- the experimental group consisted of 50 ⁇ L cells + 50 ⁇ L culture medium diluted with gradient concentration compounds (24 nM to 50 ⁇ M dilutions). After continuing to culture in the incubator for 72 hours, 10 ⁇ L CCK solution was directly added. After incubation in the incubator for 1 hour, the OD450 value and the reference wavelength OD620 value were measured using an enzyme marker. First, the OD450 value was deducted from the OD620 value and the value was recorded as the OD’450 value.
- Proliferation rate (OD’450 value of the experimental group - OD’450 value of the pure compound control group) / (OD’450 value of the no compound control group - blank OD’450 value).
- the proliferation rate of the compound at each concentration the proliferation rate of the compound-treated cells at that concentration / the proliferation rate of the DMSO-treated cells at the same concentration. The results are shown in Table 4 and Figure 1.
- the IC50 values of the above compounds in AML-related cell lines are 1.7-25 times lower than those in non-target cells (A549), indicating that they have a good effect in inhibiting the proliferation of AML cells.
- the IC50 of compound 14 in Thp-1 is only 0.5784 ⁇ M, and the effect of inhibiting cell proliferation is more obvious.
- the steps are basically the same as the A549 cell line, but the starting cell concentration is 4.8*10 ⁇ 4 cells/well, inoculated into a matrigel-coated plate, and the culture medium is replaced with 105 ⁇ L of CCK-8 diluent (95 ⁇ L culture medium + 10 ⁇ L CCK solution) after 72h of culture.
- the subsequent experiments are based on the standard curve to determine the inoculation amount per well as 3,000 cells, and the CCK-8 incubation time is 1h.
- Data processing is the same as the A549 cell line.
- J1-890Dnmt3a-/- and J1-890 cell lines proliferation inhibition rate determination The basic steps are the same as A549 operation, but the inoculation amount per well is 3,000 cells, and the medium is replaced with a medium diluted with gradient concentration compounds after overnight culture (about 12 hours). Data processing is the same as A549 cell line. The results are shown in Table 5.
- DNMT3A protein was hardly expressed in J1-890Dnmt3a-/-, as shown in Figures 2 and 3; and Dnmt3a2 knockout did not affect the IC50 of these four drugs.
- these compounds work by targeting DNMT3A protein and do not cause off-target effects.
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Abstract
Description
本申请要求申请日为2023/6/21的中国专利申请2023107433385的优先权。本申请引用上述中国专利申请的全文。This application claims the priority of Chinese Patent Application No. 2023107433385 filed on June 21, 2023. This application cites the entire text of the above Chinese Patent Application.
本发明属于生物医药领域,具体的本发明涉及一种噻唑烷二酮类化合物、其药物组合物和其用途。The present invention belongs to the field of biomedicine, and specifically relates to a thiazolidinedione compound, a pharmaceutical composition thereof and a use thereof.
DNA甲基转移酶DNMT3A是负责真核生物DNA从头甲基化的重要表观遗传修饰酶。DNMT3A由柔性N端、PWWP结构域(Pro-Trp-Trp-Pro domain)、ADD结构域(ATRX-DNMT3-DNMT3L domain)和催化结构域(Methyltransferase domain,MT)组成。MT特定位点的突变不仅会导致过度生长综合征(Tatton-Brown-Rahman syndrome,TBRS)等发育相关的疾病,而且与急性髓系白血病(Acute myeloid leukemia,AML)等肿瘤密切相关。研究表明,DNMT3A的MT突变能够引起DNA甲基化等表观遗传调控模式的显著变化,进而影响相关一系列基因表达,最终影响特定细胞的分化和增殖,导致疾病的发生。DNA methyltransferase DNMT3A is an important epigenetic modification enzyme responsible for de novo DNA methylation in eukaryotes. DNMT3A consists of a flexible N-terminus, a PWWP domain (Pro-Trp-Trp-Pro domain), an ADD domain (ATRX-DNMT3-DNMT3L domain) and a catalytic domain (Methyltransferase domain, MT). Mutations at specific MT sites not only lead to developmental diseases such as Tatton-Brown-Rahman syndrome (TBRS), but are also closely related to tumors such as acute myeloid leukemia (AML). Studies have shown that MT mutations in DNMT3A can cause significant changes in epigenetic regulatory patterns such as DNA methylation, thereby affecting the expression of a series of related genes, ultimately affecting the differentiation and proliferation of specific cells, and leading to the occurrence of diseases.
发明内容Summary of the invention
本发明要解决的技术问题是现有技术中DNA甲基转移酶DNMT3A的抑制剂较少,为此,本发明提供了一种噻唑烷二酮类化合物、其药物组合物和其用途。本发明提供的噻唑烷二酮类化合物对DNA甲基转移酶3A(DNMT3A)具有良好的抑制活性。The technical problem to be solved by the present invention is that there are few inhibitors of DNA methyltransferase DNMT3A in the prior art. To this end, the present invention provides a thiazolidinedione compound, a pharmaceutical composition thereof and a use thereof. The thiazolidinedione compound provided by the present invention has good inhibitory activity on DNA methyltransferase 3A (DNMT3A).
本发明提供了一种如式I所示的化合物或其药学上可接受的盐在制备DNA甲基转移酶3A(DNMT3A)抑制剂中的应用,
The present invention provides a use of a compound as shown in formula I or a pharmaceutically acceptable salt thereof in the preparation of a DNA methyltransferase 3A (DNMT3A) inhibitor.
其中,in,
n为1、2、3、4或5;n is 1, 2, 3, 4 or 5;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为C6-10芳环或5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Ring A is a C 6-10 aromatic ring or a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-1取代的C6-10芳基、被一个或多个RL-2取代的3-10元杂环烯基、被一个或多个RL-3取代的C1-6杂烷基或被一个或多个RL-4取代的苯并3-10元杂环烯基;所述3-10元杂环烯 基、所述C1-6杂烷基和所述苯并3-10元杂环烯基中的3-10元杂环烯基的杂原子独立地选自N、O和S中的一种、两种或三种,杂原子个数独立地为1、2或3;L is a C 6-10 aryl substituted by one or more R L-1 , a 3-10 membered heterocycloalkenyl substituted by one or more R L-2 , a C 1-6 heteroalkyl substituted by one or more R L-3 , or a benzo 3-10 membered heterocycloalkenyl substituted by one or more R L-4 ; the 3-10 membered heterocycloalkenyl The heteroatoms of the benzo-3-10 membered heterocycloalkenyl group, the C 1-6 heteroalkyl group and the 3-10 membered heterocycloalkenyl group are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3;
各个RL-1、RL-2、RL-3和RL-4独立地为羧基、氧代(=O)、C1-6烷基、或5-10元杂芳基,所述5-10元杂芳基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Each of RL -1 , RL -2 , RL-3 and RL-4 is independently carboxyl, oxo (=O), C1-6 alkyl, or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of the heteroatoms is 1, 2 or 3;
各个RL-1-1和RL-1-2独立地为C1-6烷基、C6-10芳基、被一个或多个RL-1-1-1取代的C1-6烷基或被一个或多个RL-1-1-2取代的C6-10芳基;each of RL -1-1 and RL-1-2 is independently C1-6 alkyl, C6-10 aryl, C1-6 alkyl substituted by one or more RL-1-1-1 , or C6-10 aryl substituted by one or more RL-1-1-2 ;
各个RL-1-1-1和RL-1-1-2独立地为C1-6烷基、C1-6烷氧基、硝基或C2-6炔基。Each of RL-1-1-1 and RL -1-1-2 is independently C1-6 alkyl, C1-6 alkoxy, nitro or C2-6 alkynyl.
在某一优选方案中,各个R1中,所述C1-6烷基为甲基、乙基、正丙基、异丙基、正丁基、仲丁基、异丁基或叔丁基,例如甲基。In a preferred embodiment, in each R 1 , the C 1-6 alkyl group is methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl, for example, methyl.
在某一优选方案中,各个R1中,所述C1-6烷氧基为甲氧基、乙氧基、正丙氧基、异丙氧基、正丁氧基、仲丁氧基、异丁氧基或叔丁氧基,例如甲氧基。In a preferred embodiment, in each R 1 , the C 1-6 alkoxy group is methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, sec-butoxy, isobutoxy or tert-butoxy, such as methoxy.
在某一优选方案中,环A中,所述C6-10芳环为苯环或萘环,例如苯环。在某一优选方案中,当环A为C6-10芳环时,为 In a preferred embodiment, in ring A, the C 6-10 aromatic ring is a benzene ring or a naphthalene ring, such as a benzene ring. In a preferred embodiment, when ring A is a C 6-10 aromatic ring, for
在某一优选方案中,环A中,所述5-10元杂芳环的杂原子为O,杂原子个数为1、2或3;例如杂原子为O,杂原子个数为1。In a preferred embodiment, in ring A, the heteroatom of the 5-10 membered heteroaromatic ring is O, and the number of heteroatoms is 1, 2 or 3; for example, the heteroatom is O, and the number of heteroatoms is 1.
在某一优选方案中,环A中,所述5-10元杂芳环为5-6元杂芳环,例如呋喃环。In a preferred embodiment, in ring A, the 5-10 membered heteroaromatic ring is a 5-6 membered heteroaromatic ring, such as a furan ring.
在某一优选方案中,当环A为5-10元杂芳环时,为 In a preferred embodiment, when ring A is a 5-10 membered heteroaromatic ring, for
在某一优选方案中,L中,所述被一个或多个RL-1取代的C6-10芳基中的C6-10芳基为苯基或萘基,例如苯基。In a preferred embodiment, in L, the C 6-10 aryl group in the C 6-10 aryl group substituted by one or more R L-1 is phenyl or naphthyl, for example phenyl.
在某一优选方案中,L中,所述被一个或多个RL-2取代的3-10元杂环烯基中和所述被一个或多个RL-4取代的苯并3-10元杂环烯基中的3-10元杂环烯基中的双键的个数独立地为1、2或3,例如2。In a preferred embodiment, in L, the number of double bonds in the 3-10 membered heterocycloalkenyl group substituted by one or more R L-2 and the 3-10 membered heterocycloalkenyl group in the benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 is independently 1, 2 or 3, for example 2.
在某一优选方案中,L中,所述被一个或多个RL-2取代的3-10元杂环烯基中和所述被一个或多个RL-4取代的苯并3-10元杂环烯基中的3-10元杂环烯基独立地为5-6元杂环烯基。In a preferred embodiment, in L, the 3-10 membered heterocycloalkenyl substituted by one or more RL -2 and the 3-10 membered heterocycloalkenyl in the benzo 3-10 membered heterocycloalkenyl substituted by one or more RL-4 are independently 5-6 membered heterocycloalkenyl.
在某一优选方案中,L中,所述被一个或多个RL-2取代的3-10元杂环烯基中和所述被一个或多个RL-4取代的苯并3-10元杂环烯基中的3-10元杂环烯基的杂原子为N,杂原子个数为1、2或3;例如杂原子为N,杂原子个数为1。In a preferred embodiment, in L, the heteroatom of the 3-10 membered heterocycloalkenyl substituted by one or more RL -2 and the 3-10 membered heterocycloalkenyl in the benzo 3-10 membered heterocycloalkenyl substituted by one or more RL -4 is N, and the number of heteroatoms is 1, 2 or 3; for example, the heteroatom is N, and the number of heteroatoms is 1.
在某一优选方案中,L中,所述被一个或多个RL-2取代的3-10元杂环烯基中的3-10元杂环烯基为例如 In a preferred embodiment, in L, the 3-10 membered heterocycloalkenyl group in the 3-10 membered heterocycloalkenyl group substituted by one or more R L-2 is For example
在某一优选方案中,L中,所述被一个或多个RL-4取代的苯并3-10元杂环烯基中的苯并3-10元杂环烯基为例如 In a preferred embodiment, in L, the benzo 3-10 membered heterocycloalkenyl group in the benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 is For example
在某一优选方案中,L中,所述被一个或多个RL-3取代的C1-6杂烷基中的C1-6杂烷基的杂原子选自N、O和S中的一种或两种,杂原子个数为1、2或3;例如杂原子选自N和O中的一种或两种,杂原子个数为2;再例如杂原子为N和O,杂原子个数为2。In a preferred embodiment, in L, the heteroatom of the C1-6 heteroalkyl group substituted by one or more RL -3 is selected from one or two of N, O and S, and the number of heteroatoms is 1, 2 or 3; for example, the heteroatom is selected from one or two of N and O, and the number of heteroatoms is 2; for another example, the heteroatom is N and O, and the number of heteroatoms is 2.
在某一优选方案中,L中,所述被一个或多个RL-3取代的C1-6杂烷基中的C1-6杂烷基为直链杂烷基。In a preferred embodiment, in L, the C 1-6 heteroalkyl group in the C 1-6 heteroalkyl group substituted by one or more RL-3 is a straight-chain heteroalkyl group.
在某一优选方案中,L中,所述被一个或多个RL-3取代的C1-6杂烷基中的C1-6杂烷基为C1-4杂烷基,例如 In a preferred embodiment, in L, the C 1-6 heteroalkyl group in the C 1-6 heteroalkyl group substituted by one or more RL-3 is a C 1-4 heteroalkyl group, for example
在某一优选方案中,各个RL-1、RL-2、RL-3和RL-4中,所述C1-6烷基独立地为甲基、乙基、正丙基、异丙基、正丁基、仲丁基、异丁基或叔丁基,例如甲基。In a preferred embodiment, in each of RL -1 , RL-2 , RL-3 and RL -4 , the C1-6 alkyl group is independently methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl, such as methyl.
在某一优选方案中,各个RL-1、RL-2、RL-3和RL-4中,所述5-10元杂芳基的杂原子独立地为N,杂原子个数独立地为1、2或3;例如杂原子为N,杂原子个数为1。In a preferred embodiment, in each of RL -1 , RL-2 , RL-3 and RL -4 , the heteroatom of the 5-10 membered heteroaryl is independently N, and the number of heteroatoms is independently 1, 2 or 3; for example, the heteroatom is N, and the number of heteroatoms is 1.
在某一优选方案中,各个RL-1、RL-2、RL-3和RL-4中,所述5-10元杂芳基独立地为5-6元杂芳基,例如独立地为吡啶基,再例如 In a preferred embodiment, in each of RL -1 , RL-2 , RL-3 and RL -4 , the 5-10 membered heteroaryl group is independently a 5-6 membered heteroaryl group, for example, independently a pyridyl group, for example
在某一优选方案中,各个RL-1-1和RL-1-2中,所述C1-6烷基和所述被一个或多个RL-1-1-1取代的C1- 6烷基中的C1-6烷基独立地为甲基、乙基、正丙基、异丙基、正丁基、仲丁基、异丁基或叔丁基;例如甲基、乙基、正丙基或异丁基。In a preferred embodiment, in each of RL-1-1 and RL -1-2 , the C1-6 alkyl group and the C1-6 alkyl group substituted by one or more RL-1-1-1 are independently methyl, ethyl, n - propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl; for example, methyl, ethyl, n-propyl or isobutyl.
在某一优选方案中,各个RL-1-1和RL-1-2中,所述C6-10芳基和所述被一个或多个RL-1-1-2取代的C6- 10芳基中的C6-10芳基独立地为苯基或萘基,例如苯基。In a preferred embodiment, in each of RL-1-1 and RL -1-2 , the C6-10 aryl group and the C6-10 aryl group substituted by one or more RL-1-1-2 are independently phenyl or naphthyl, for example phenyl.
在某一优选方案中,每一多个独立地为2个或3个。In a preferred embodiment, each plurality is independently 2 or 3.
在某一优选方案中,各个RL-1-1-1独和RL-1-1-2中,所述C1-6烷基独立地为甲基、乙基、正丙基、异丙基、正丁基、仲丁基、异丁基或叔丁基,例如甲基。In a preferred embodiment, in each of RL-1-1-1 and RL-1-1-2 , the C1-6 alkyl group is independently methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl or tert-butyl, for example methyl.
在某一优选方案中,各个RL-1-1-1独和RL-1-1-2中,所述C1-6烷氧基独立地为甲氧基、乙氧基、正丙氧基、异丙氧基、正丁氧基、仲丁氧基、异丁氧基或叔丁氧基,例如甲氧基。In a preferred embodiment, in each of RL-1-1-1 and RL -1-1-2 , the C1-6 alkoxy group is independently methoxy, ethoxy, n-propoxy, isopropoxy, n-butoxy, sec-butoxy, isobutoxy or tert-butoxy, for example methoxy.
在某一优选方案中,各个RL-1-1-1和RL-1-1-2中,所述C2-6炔基独立地为乙炔基、丙炔基或丁炔基,例如 In a preferred embodiment, in each of RL -1-1-1 and RL-1-1-2 , the C2-6 alkynyl group is independently ethynyl, propynyl or butynyl, for example
在某一优选方案中,n为1或2。In a preferred embodiment, n is 1 or 2.
在某一优选方案中,X1为O。In a preferred embodiment, X1 is O.
在某一优选方案中,X2为O或S。In a preferred embodiment, X2 is O or S.
在某一优选方案中,环A为5-6元杂芳环;所述5-6元杂芳环的杂原子选自N、O和S中的一 种、两种或三种,杂原子个数为1、2或3。In a preferred embodiment, ring A is a 5-6 membered heteroaromatic ring; the heteroatom of the 5-6 membered heteroaromatic ring is selected from one of N, O and S. There are 1, 2 or 3 heteroatoms.
在某一优选方案中,L为被一个或多个RL-1取代的C6-10芳基、被一个或多个RL-2取代的3-10元杂环烯基或被一个或多个RL-4取代的苯并3-10元杂环烯基;较佳地,L为被一个或多个RL-1取代的C6-10芳基、被一个或多个RL-2取代的5-6元杂环烯基或被一个或多个RL-4取代的苯并5-6元杂环烯基,所述5-6元杂环烯基和苯并5-6元杂环烯中的5-6元杂环烯的杂原子为N,杂原子个数为1、2或3。In a preferred embodiment, L is a C 6-10 aryl group substituted by one or more RL-1 , a 3-10 membered heterocycloalkenyl group substituted by one or more RL-2 , or a benzo 3-10 membered heterocycloalkenyl group substituted by one or more RL-4 ; preferably, L is a C 6-10 aryl group substituted by one or more RL-1 , a 5-6 membered heterocycloalkenyl group substituted by one or more RL-2, or a benzo 5-6 membered heterocycloalkenyl group substituted by one or more RL -4 , and the heteroatom of the 5-6 membered heterocycloalkenyl group and the 5-6 membered heterocycloalkenyl in the benzo 5-6 membered heterocycloalkenyl is N, and the number of heteroatoms is 1, 2 or 3.
在某一优选方案中,被一个或多个RL-1取代的C6-10芳基为 In a preferred embodiment, the C 6-10 aryl group substituted by one or more R L-1 is
在某一优选方案中,各个RL-1独立地为羧基、 In a preferred embodiment, each RL-1 is independently a carboxyl group,
在某一优选方案中,各个RL-1独立地为羧基或较佳地为 In a preferred embodiment, each RL-1 is independently a carboxyl group or Preferably
在某一优选方案中,各个RL-1-1独立地为C1-6烷基或被一个或多个RL-1-1-1取代的C1-6烷基。In a preferred embodiment, each RL-1-1 is independently a C1-6 alkyl group or a C1-6 alkyl group substituted by one or more RL-1-1-1 groups .
在某一优选方案中,各个RL-1-2独立地为C1-6烷基或被一个或多个RL-1-1-1取代的C1-6烷基;较佳地,为被一个或多个RL-1-1-1取代的C1-6烷基。In a preferred embodiment, each RL-1-2 is independently a C 1-6 alkyl group or a C 1-6 alkyl group substituted by one or more RL-1-1-1 ; preferably, it is a C 1-6 alkyl group substituted by one or more RL-1-1-1 .
在某一优选方案中,各个RL-1-1-1独立地为C1-6烷基或C2-6炔基。In a preferred embodiment, each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl.
在某一优选方案中,各个RL-1-1-1独立地为C2-6炔基。In a preferred embodiment, each RL -1-1-1 is independently a C2-6 alkynyl group.
在某一优选方案中,各个RL-1-1-2独立地为C1-6烷基、C1-6烷氧基或硝基。In a preferred embodiment, each RL-1-1-2 is independently C1-6 alkyl, C1-6 alkoxy or nitro.
在某一优选方案中,被一个或多个RL-2取代的3-10元杂环烯基为 In a preferred embodiment, the 3-10 membered heterocycloalkenyl substituted by one or more R L-2 is
在某一优选方案中,各个RL-2为氧代。In a preferred embodiment, each RL -2 is oxo.
在某一优选方案中,被一个或多个RL-3取代的C1-6杂烷基为 In a preferred embodiment, the C 1-6 heteroalkyl substituted by one or more R L-3 is
在某一优选方案中,各个RL-3独立地为C1-6烷基或5-10元杂芳基,所述5-10元杂芳基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3。In a preferred embodiment, each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of the heteroatoms is 1, 2 or 3.
在某一优选方案中,各个RL-3独立地为C1-6烷基或5-6元杂芳基,所述5-6元杂芳基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3。In a preferred embodiment, each RL -3 is independently a C1-6 alkyl group or a 5-6 membered heteroaryl group, wherein the heteroatoms of the 5-6 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of the heteroatoms is 1, 2 or 3.
在某一优选方案中,被一个或多个RL-4取代的苯并3-10元杂环烯基为 In a preferred embodiment, the benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 is
在某一优选方案中,各个RL-4为氧代。 In a preferred embodiment, each RL -4 is oxo.
在某一优选方案中,各个RL-1独立地为例如 In a preferred embodiment, each RL -1 is independently For example
在某一优选方案中,各个RL-1独立地为例如 In a preferred embodiment, each RL -1 is independently For example
在某一优选方案中,各个RL-1独立地为 In a preferred embodiment, each RL -1 is independently
在某一优选方案中,为较佳地为 In a preferred embodiment, for Preferably for
在某一优选方案中,为 In a preferred embodiment, for
在某一优选方案中,为较佳地,为 In a preferred embodiment, for Preferably,
在某一优选方案中,环A为较佳地,为较佳地,为 In a preferred embodiment, ring A is Preferably, for Preferably,
在某一优选方案中,L为 较佳地,L为 In a preferred embodiment, L is Preferably, L is
在某一优选方案中,L为 更佳地,为 In a preferred embodiment, L is More preferably,
在某一优选方案中;In a preferred embodiment;
n为1或2;n is 1 or 2;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为C6-10芳环或5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种或多种,杂原子个数为1、2或3;Ring A is a C 6-10 aromatic ring or a 5-10 membered heteroaromatic ring; the heteroatom of the 5-10 membered heteroaromatic ring is selected from one or more of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-1取代的C6-10芳基、被一个或多个RL-2取代的3-10元杂环烯基、被一个或多个RL-3取代的C1-6杂烷基或被一个或多个RL-4取代的苯并3-10元杂环烯基;所述3-10元亚杂环烯基和所述C1-6杂烷基的杂原子独立地选自N、O和S中的一种、两种或三种,杂原子个数独立地为1、2或3; L is a C 6-10 aryl substituted by one or more R L-1 , a 3-10 membered heterocycloalkenyl substituted by one or more R L-2 , a C 1-6 heteroalkyl substituted by one or more R L-3 , or a benzo 3-10 membered heterocycloalkenyl substituted by one or more R L-4 ; the heteroatoms of the 3-10 membered heterocycloalkenylene and the C 1-6 heteroalkyl are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3;
各个RL-1独立地为羧基、 Each RL -1 is independently a carboxyl group,
各个RL-2为氧代;Each RL -2 is oxo;
各个RL-3独立地为C1-6烷基或5-10元杂芳基,所述5-10元杂芳基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
各个RL-4为氧代;Each RL -4 is oxo;
各个RL-1-1独立地为C1-6烷基或被一个或多个RL-1-1-1取代的C1-6烷基;Each RL -1-1 is independently C1-6 alkyl or C1-6 alkyl substituted by one or more RL -1-1-1 ;
各个RL-1-2独立地为C1-6烷基、6-10元芳基、被一个或多个RL-1-1-1取代的C1-6烷基或被一个或多个RL-1-1-2取代的6-10元芳基;each RL -1-2 is independently C1-6 alkyl, 6-10 membered aryl, C1-6 alkyl substituted with one or more RL-1-1-1 , or 6-10 membered aryl substituted with one or more RL -1-1-2 ;
各个RL-1-1-1独立地为C1-6烷基或C2-6炔基;Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl;
各个RL-1-1-2独立地为C1-6烷基、C1-6烷氧基或硝基。Each RL -1-1-2 is independently C1-6 alkyl, C1-6 alkoxy or nitro.
在某一优选方案中,环A为C6-10芳环。In a preferred embodiment, Ring A is a C 6-10 aromatic ring.
在某一优选方案中,环A为5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3。In a preferred embodiment, ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3.
在某一优选方案中,环A为C6-10芳环;L为被一个或多个RL-3取代的C1-6杂烷基。In a preferred embodiment, ring A is a C 6-10 aromatic ring; and L is a C 1-6 heteroalkyl group substituted by one or more RL -3 groups .
在某一优选方案中,环A为5-10元杂芳环,L为被一个或多个RL-1取代的C6-10芳基,各个RL-1为 In a preferred embodiment, ring A is a 5-10 membered heteroaromatic ring, L is a C 6-10 aryl group substituted by one or more R L-1 , each R L-1 is
在某一优选方案中,环A为5-10元杂芳环,L为被一个或多个RL-1取代的C6-10芳基,各个RL-1为 In a preferred embodiment, ring A is a 5-10 membered heteroaromatic ring, L is a C 6-10 aryl group substituted by one or more R L-1 , each R L-1 is
在某一优选方案中,环A为5-10元杂芳环,L为被一个或多个RL-2取代的3-10元杂环烯基或被一个或多个RL-4取代的苯并3-10元杂环烯基;各个3-10元亚杂环烯基的杂原子独立地选自N、O和S中的一种、两种或三种,杂原子个数独立地为1、2或3。In a preferred embodiment, ring A is a 5-10 membered heteroaromatic ring, L is a 3-10 membered heterocycloalkenyl substituted by one or more RL-2 or a benzo 3-10 membered heterocycloalkenyl substituted by one or more RL -4 ; the heteroatoms of each 3-10 membered heterocycloalkenylene group are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3.
在某一优选方案中,上述的如式I所示的化合物为以下任一方案:In a preferred embodiment, the compound as shown in formula I is any of the following embodiments:
方案(1):Solution (1):
n为1或2;n is 1 or 2;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为C6-10芳环;Ring A is a C 6-10 aromatic ring;
L为被一个或多个RL-3取代的C1-6杂烷基;所述C1-6亚杂烷基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;L is a C 1-6 heteroalkyl group substituted by one or more R L-3 ; the heteroatoms of the C 1-6 heteroalkylene group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
各个RL-3独立地为C1-6烷基或5-10元杂芳基,所述5-10元杂芳基的杂原子选自N、O和S中的 一种、两种或三种,杂原子个数为1、2或3;Each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatom of the 5-10 membered heteroaryl group is selected from N, O and S. One, two or three kinds of heteroatoms, the number of heteroatoms is 1, 2 or 3;
方案(2):Solution (2):
n为1或2;n is 1 or 2;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-1取代的C6-10芳基,各个RL-1为 L is a C 6-10 aryl group substituted by one or more R L-1 , each R L-1 being
各个RL-1-1独立地为C1-6烷基或被一个或多个RL-1-1-1取代的C1-6烷基;Each RL -1-1 is independently C1-6 alkyl or C1-6 alkyl substituted by one or more RL -1-1-1 ;
各个RL-1-1-1独立地为C1-6烷基或C2-6炔基。Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl.
方案(3):Solution (3):
n为1或2;n is 1 or 2;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-1取代的C6-10芳基;各个RL-1为 L is a C 6-10 aryl group substituted by one or more R L-1 ; each R L-1 is
各个RL-1-2独立地为C1-6烷基、6-10元芳基、被一个或多个RL-1-1-1取代的C1-6烷基或被一个或多个RL-1-1-2取代的6-10元芳基;each RL -1-2 is independently C1-6 alkyl, 6-10 membered aryl, C1-6 alkyl substituted with one or more RL-1-1-1 , or 6-10 membered aryl substituted with one or more RL -1-1-2 ;
各个RL-1-1-1独立地为C1-6烷基或C2-6炔基;Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl;
各个RL-1-1-2独立地为C1-6烷基、C1-6烷氧基或硝基;Each RL -1-1-2 is independently C1-6 alkyl, C1-6 alkoxy or nitro;
方案(4):Solution (4):
n为1或2;n is 1 or 2;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Ring A is a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-2取代的3-10元杂环烯基或被一个或多个RL-4取代的苯并3-10元杂环烯基;所述3-10元亚杂环烯基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;L is a 3-10 membered heterocycloalkenyl group substituted by one or more R L-2 or a benzo 3-10 membered heterocycloalkenyl group substituted by one or more R L-4 ; the heteroatoms of the 3-10 membered heterocycloalkenylene group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
各个RL-2和RL-4为氧代。 Each of RL-2 and RL-4 is oxo.
在某一优选方案中,In a preferred embodiment,
n为1、2、3、4或5;n is 1, 2, 3, 4 or 5;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为单键或双键; is a single bond or a double bond;
环A为C6-10芳环或5-10元杂芳环;所述5-10元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Ring A is a C 6-10 aromatic ring or a 5-10 membered heteroaromatic ring; the heteroatoms of the 5-10 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-1取代的C6-10芳基、被一个或多个RL-2取代的3-10元杂环烯基、被一个或多个RL-3取代的C1-6杂烷基或被一个或多个RL-4取代的苯并3-10元杂环烯基;所述3-10元杂环烯基、所述C1-6杂烷基和所述苯并3-10元杂环烯基中的3-10元杂环烯基的杂原子独立地选自N、O和S中的一种、两种或三种,杂原子个数独立地为1、2或3;L is a C 6-10 aryl substituted by one or more R L-1 , a 3-10 membered heterocycloalkenyl substituted by one or more R L-2 , a C 1-6 heteroalkyl substituted by one or more R L-3 , or a benzo 3-10 membered heterocycloalkenyl substituted by one or more R L-4 ; the heteroatoms of the 3-10 membered heterocycloalkenyl, the C 1-6 heteroalkyl and the benzo 3-10 membered heterocycloalkenyl are independently selected from one, two or three of N, O and S, and the number of heteroatoms is independently 1, 2 or 3;
各个RL-1独立地为羧基或 Each RL-1 is independently carboxyl or
各个RL-2为氧代;Each RL -2 is oxo;
各个RL-3独立地为C1-6烷基或5-10元杂芳基,所述5-10元杂芳基的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Each RL -3 is independently a C1-6 alkyl group or a 5-10 membered heteroaryl group, wherein the heteroatoms of the 5-10 membered heteroaryl group are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
各个RL-4为氧代;Each RL -4 is oxo;
各个RL-1-2独立地为C1-6烷基或被一个或多个RL-1-1-1取代的C1-6烷基。Each RL -1-2 is independently C1-6 alkyl or C1-6 alkyl substituted with one or more RL -1-1-1 .
各个RL-1-1-1独立地为C1-6烷基或C2-6炔基。Each RL-1-1-1 is independently C1-6 alkyl or C2-6 alkynyl.
在某一优选方案中,n为1、2、3、4或5;In a preferred embodiment, n is 1, 2, 3, 4 or 5;
各个R1独立地为C1-6烷基或C1-6烷氧基;Each R 1 is independently C 1-6 alkyl or C 1-6 alkoxy;
X1和X2独立地为O或S; X1 and X2 are independently O or S;
为双键; is a double bond;
环A为5-6元杂芳环;所述5-6元杂芳环的杂原子选自N、O和S中的一种、两种或三种,杂原子个数为1、2或3;Ring A is a 5-6 membered heteroaromatic ring; the heteroatoms of the 5-6 membered heteroaromatic ring are selected from one, two or three of N, O and S, and the number of heteroatoms is 1, 2 or 3;
L为被一个或多个RL-1取代的C6-10芳基、被一个或多个RL-2取代的5-6元杂环烯基或被一个或多个RL-4取代的苯并5-6元杂环烯基,所述5-6元杂环烯基和苯并5-6元杂环烯中的5-6元杂环烯的杂原子为N,杂原子个数为1、2或3;L is a C 6-10 aryl group substituted by one or more R L-1 , a 5-6 membered heterocycloalkenyl group substituted by one or more R L-2, or a benzo 5-6 membered heterocycloalkenyl group substituted by one or more R L-4 , wherein the heteroatom of the 5-6 membered heterocycloalkenyl group and the benzo 5-6 membered heterocycloalkenyl group is N, and the number of heteroatoms is 1, 2 or 3;
各个RL-1为各个RL-1-2独立地为被一个或多个RL-1-1-1取代的C1-6烷基,各个RL- 1-1-1独立地为C2-6炔基;Each R L-1 is each RL-1-2 is independently a C1-6 alkyl substituted by one or more RL-1-1-1 , and each RL - 1-1-1 is independently a C2-6 alkynyl;
各个RL-2为氧代;Each RL -2 is oxo;
各个RL-4为氧代。Each RL -4 is oxo.
在某一优选方案中,上述如式I所示的化合物为以下任一化合物:
In a preferred embodiment, the compound shown in formula I is any of the following compounds:
在某一优选方案中,在所述的应用中,所述的DNA甲基转移酶3A抑制剂可用于哺乳动物生物体内;也可用于生物体外,主要作为实验用途,例如:作为标准样或对照样提供比对,或按照本领域常规方法制成试剂盒,为DNA甲基转移酶3A抑制效果提供快速检测。In a preferred embodiment, in the application, the DNA methyltransferase 3A inhibitor can be used in mammalian organisms; it can also be used in vitro, mainly for experimental purposes, for example: as a standard sample or control sample for comparison, or prepared into a kit according to conventional methods in the art to provide rapid detection of DNA methyltransferase 3A inhibitory effects.
本发明提供了一种如式I’所示的化合物或其药学上可接受的盐,
The present invention provides a compound as shown in formula I' or a pharmaceutically acceptable salt thereof,
其中,in,
n、R1、X1、X2、环A和L的定义如本发明任一方案所述,且所述如式I’所示的化合物不为 n、R 1 、X 1 、X 2 、 The definitions of ring A and L are as described in any embodiment of the present invention, and the compound shown in formula I' is not
本发明还提供了一种药物组合物,其包括:The present invention also provides a pharmaceutical composition comprising:
(1)(治疗有效量的)如本发明任一方案所述如式I’所示的化合物或其药学上可接受的盐;(1) (a therapeutically effective amount) a compound represented by formula I' or a pharmaceutically acceptable salt thereof according to any embodiment of the present invention;
(2)药学上可接受的辅料。(2) Pharmaceutically acceptable excipients.
本发明还提供了一种(治疗有效量的)如本发明任一方案所述如式I或如式I’所示的化合物、其药学上可接受的盐或上述药物组合物在制备治疗和/或预防与DNA甲基化相关的疾病的药物中的应用。The present invention also provides a use of a compound as shown in Formula I or Formula I' as described in any embodiment of the present invention (in a therapeutically effective amount), a pharmaceutically acceptable salt thereof, or the above-mentioned pharmaceutical composition in the preparation of a drug for treating and/or preventing diseases related to DNA methylation.
在某一优选方案中,所述与DNA甲基化相关的疾病为过度生长综合征或急性髓系白血病。In a preferred embodiment, the disease associated with DNA methylation is overgrowth syndrome or acute myeloid leukemia.
在某一优选方案中,所述急性髓系白血病为单核细胞白血病。In a preferred embodiment, the acute myeloid leukemia is monocytic leukemia.
本发明还提供了一种(治疗有效量的)如本发明任一方案所述如式I或其药学上可接受的盐或如式I’所示的化合物或其药学上可接受的盐或上述药物组合物在制备治疗和/或预防过度生长综合征或急性髓系白血病的药物中的应用。The present invention also provides a method for preparing a drug for treating and/or preventing overgrowth syndrome or acute myeloid leukemia using a compound of formula I or a pharmaceutically acceptable salt thereof or a pharmaceutical composition thereof as described in any scheme of the present invention (in a therapeutically effective amount) or a pharmaceutical composition thereof as shown in formula I' or a pharmaceutically acceptable salt thereof.
本发明提供了一种预防和/或治疗与DNA甲基化相关的疾病的方法,其包括向患者施用治疗有效量的如本发明任一方案所述如式I或如式I’所示的化合物、其药学上可接受的盐或上述药物组合物。The present invention provides a method for preventing and/or treating diseases related to DNA methylation, comprising administering to a patient a therapeutically effective amount of a compound as shown in Formula I or Formula I' as described in any embodiment of the present invention, a pharmaceutically acceptable salt thereof, or the above-mentioned pharmaceutical composition.
本发明提供了一种预防和/或治疗过度生长综合征或急性髓系白血病的方法,其包括向患者施用治疗有效量的如本发明任一方案所述如式I或如式I’所示的化合物、其药学上可接受的盐或上述药物组合物。The present invention provides a method for preventing and/or treating overgrowth syndrome or acute myeloid leukemia, comprising administering to a patient a therapeutically effective amount of a compound as shown in Formula I or Formula I' as described in any scheme of the present invention, a pharmaceutically acceptable salt thereof, or the above-mentioned pharmaceutical composition.
如无特别说明,本发明所用术语具有如下含义:Unless otherwise specified, the terms used in the present invention have the following meanings:
本领域技术人员可以理解,根据本领域中使用的惯例,本发明描述基团的结构式中所使用的是指,相应的基团通过该位点与化合物中的其它片段、基团进行连接。It will be understood by those skilled in the art that the structural formulas used in the present invention to describe groups are based on the conventions used in the art. It means that the corresponding group is connected to other fragments and groups in the compound through this site.
术语“药学上可接受的”是指盐、溶剂、辅料等一般无毒、安全,并且适合于患者使用。 The term "pharmaceutically acceptable" means that salts, solvents, excipients, etc. are generally non-toxic, safe, and suitable for use by patients.
术语“药学上可接受的盐”是指本发明化合物与相对无毒的、药学上可接受的酸或碱制备得到的盐。当本发明的化合物中含有相对酸性的功能团时,可以通过在纯的溶液或合适的惰性溶剂中用足够量的药学上可接受的碱与这类化合物的中性形式接触的方式获得碱加成盐。当本发明的化合物中含有相对碱性的官能团时,可以通过在纯的溶液或合适的惰性溶剂中用足够量的药学上可接受的酸与这类化合物的中性形式接触的方式获得酸加成盐。所述药学上可接受的酸包括无机酸。所述药学上可接受的酸包括有机酸。当本发明的化合物中含有相对酸性和相对碱性的官能团时,可以被转换成碱加成盐或酸加成盐。The term "pharmaceutically acceptable salt" refers to a salt prepared from a compound of the present invention and a relatively nontoxic, pharmaceutically acceptable acid or base. When the compound of the present invention contains a relatively acidic functional group, a base addition salt can be obtained by contacting a neutral form of such compound with a sufficient amount of a pharmaceutically acceptable base in a pure solution or a suitable inert solvent. When the compound of the present invention contains a relatively basic functional group, an acid addition salt can be obtained by contacting a neutral form of such compound with a sufficient amount of a pharmaceutically acceptable acid in a pure solution or a suitable inert solvent. The pharmaceutically acceptable acid includes an inorganic acid. The pharmaceutically acceptable acid includes an organic acid. When the compound of the present invention contains relatively acidic and relatively basic functional groups, it can be converted into a base addition salt or an acid addition salt.
术语“化合物”、“药学上可接受的盐”如存在立体异构体,则可以以单一的立体异构体或它们的混合物(例如外消旋体)的形式存在。The terms "compound" and "pharmaceutically acceptable salt" may exist as single stereoisomers or mixtures thereof (eg, racemates), if stereoisomers exist.
术语“化合物”、“药学上可接受的盐”如存在互变异构体,则可以以单一的互变异构体或它们的混合物的形式存在,较佳地以较稳定的互变异构体为主的形式存在。The term "compound" or "pharmaceutically acceptable salt" may exist in the form of a single tautomer or a mixture thereof if tautomers exist, preferably in the form in which the more stable tautomer is predominant.
当任意变量(例如R1)在化合物的定义中多次出现时,该变量每一位置出现的定义与其余位置出现的定义无关,它们的含义互相独立、互不影响。因此,若某基团被1个、2个或3个R1基团取代,也就是说,该基团可能会被最多3个R1取代,该位置R1的定义与其余位置R1的定义是互相独立的。另外,取代基及/或变量的组合只有在该组合产生稳定的化合物时才被允许。When any variable (e.g., R 1 ) appears multiple times in the definition of a compound, the definition of the variable at each position is independent of the definitions at the remaining positions, and their meanings are independent of each other. Therefore, if a group is substituted with 1, 2, or 3 R 1 groups, that is, the group may be substituted with up to 3 R 1s , the definition of R 1 at that position is independent of the definitions of R 1 at the remaining positions. In addition, combinations of substituents and/or variables are allowed only if the combination results in a stable compound.
术语“烷基”是指具有指定的碳原子数的直链或支链烷基。烷基的实例包括甲基、乙基、正丙基、异丙基、正丁基、叔丁基、异丁基、仲丁基、正戊基、正己基及其类似烷基。The term "alkyl" refers to a straight or branched chain alkyl group having a specified number of carbon atoms. Examples of alkyl groups include methyl, ethyl, n-propyl, isopropyl, n-butyl, tert-butyl, isobutyl, sec-butyl, n-pentyl, n-hexyl, and the like.
术语“炔基”是指具有指定碳原子数的一个或多个叁键的直链或支链的烃基(例如C2-C8炔基,又例如C2-C4炔基)。该一个或多个碳碳叁键可以是内部的也可以是末端的,例如叁键在内部的丙炔基或叁键在末端的丙炔基等。The term "alkynyl" refers to a straight or branched hydrocarbon group (e.g., C2 - C8 alkynyl, or C2 - C4 alkynyl) having one or more triple bonds to a specified number of carbon atoms. The one or more carbon-carbon triple bonds may be internal or terminal, such as propynyl with an internal triple bond. or a propynyl group with a triple bond at the terminal wait.
术语“烷氧基”是指基团-O-RX,其中,RX为如上文所定义的烷基。The term "alkoxy" refers to a group -ORX , wherein RX is alkyl as defined above.
术语“杂烷基”是指直链或支链烷基的母体结构中,在一定位置上的碳原子被杂原子替换,并且具有指定碳原子数(例如C1~C6)的、指定杂原子数(例如1个、2个或3个)的、指定杂原子种类(N、O和S中的一种或多种)的基团。杂烷基包括但不限于等。The term "heteroalkyl" refers to a group in which a carbon atom at a certain position in the parent structure of a straight or branched alkyl group is replaced by a heteroatom, and has a specified number of carbon atoms (e.g., C 1 to C 6 ), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatom (one or more of N, O, and S). Heteroalkyl groups include, but are not limited to wait.
术语“芳基”是指具有指定的碳原子数(例如C6-10)的、仅由碳原子组成的环状基团,其为单环或多环,且每个环都具有芳香性(符合休克尔规则)。芳基包括但不限于苯基和萘基等。The term "aryl" refers to a cyclic group consisting of only carbon atoms, having a specified number of carbon atoms (e.g., C 6-10 ), which is monocyclic or polycyclic, and each ring is aromatic (complying with Huckel's rule). Aryl includes, but is not limited to, phenyl and naphthyl.
术语“芳环”是指具有指定的碳原子数(例如C6-10)的、仅由碳原子组成的环状基团,其为单环或多环,且每个环都具有芳香性(符合休克尔规则)。芳环包括但不限于苯环和萘环等。The term "aromatic ring" refers to a cyclic group consisting of only carbon atoms with a specified number of carbon atoms (e.g. C 6-10 ), which is monocyclic or polycyclic, and each ring is aromatic (complying with Huckel's rule). Aromatic rings include, but are not limited to, benzene rings and naphthalene rings.
术语“杂芳基”是指具有指定环原子数(例如5-10元)的、指定杂原子数(例如1个、2个或3个)的、指定杂原子种类(N、O和S中的1种、2种或3种)的环状芳香基团,其为单环或双环,当为双环时,每一个环均具有芳香性,例如呋喃基、吡啶基、哒嗪基、嘧啶基、吡嗪基、噻吩基、异唑基、噁唑基、二唑基、咪唑基、吡咯基、吡唑基、三唑基、四唑基、噻唑基、异噻唑基、噻二唑基、苯并咪唑基、吲哚基、吲唑基、苯并噻唑基、苯并异噻唑基、喹啉基、异喹啉基等。The term "heteroaryl" refers to a cyclic aromatic group having a specified number of ring atoms (e.g., 5-10 members), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatoms (1, 2, or 3 of N, O, and S). It is monocyclic or bicyclic. When it is bicyclic, each ring is aromatic, for example, furanyl, pyridyl, pyridazinyl, pyrimidinyl, pyrazinyl, thienyl, isoxazolyl, oxazolyl, diazolyl, imidazolyl, pyrrolyl, pyrazolyl, triazolyl, tetrazolyl, thiazolyl, isothiazolyl, thiadiazolyl, benzimidazolyl, indolyl, indazolyl, benzothiazolyl, benzisothiazolyl, quinolyl, isoquinolyl, and the like.
术语“杂芳环”是指具有指定环原子数(例如5-10元)的、指定杂原子数(例如1个、2个或3个)的、指定杂原子种类(N、O和S中的1种、2种或3种)的环状芳香基团,其为单环或双环,当为 双环时,每一个环均具有芳香性,例如呋喃环、吡啶环、哒嗪环、嘧啶环、吡嗪环、噻吩环、异唑环、噁唑环、二唑环、咪唑环、吡咯环、吡唑环、三唑环、四唑环、噻唑环、异噻唑环、噻二唑环、苯并咪唑环、吲哚环、吲唑环、苯并噻唑环、苯并异噻唑环、喹啉环、异喹啉环等。The term "heteroaromatic ring" refers to a cyclic aromatic group having a specified number of ring atoms (e.g., 5-10 members), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatoms (1, 2, or 3 of N, O, and S), which is monocyclic or bicyclic. When it is bicyclic, each ring is aromatic, for example, furan ring, pyridine ring, pyridazine ring, pyrimidine ring, pyrazine ring, thiophene ring, isoxazole ring, oxadiazole ring, imidazole ring, pyrrole ring, pyrazole ring, triazole ring, tetrazole ring, thiazole ring, isothiazole ring, thiadiazole ring, benzimidazole ring, indole ring, indazole ring, benzothiazole ring, benzisothiazole ring, quinoline ring, isoquinoline ring and the like.
术语“杂环烯基”是指具有指定环原子数(例如3-10元)的、指定杂原子数(例如1个、2个或3个)的、指定杂原子种类(N、O和S中的1种、2种或3种)的环状基团,其为单环、桥环或螺环,且其中至少一个环含有一个或多个“双键”,“杂环烯基”不含有闭合的环状共轭体系,只有孤立的π键或不连续的共轭π键;例如等。The term "heterocycloalkenyl" refers to a cyclic group with a specified number of ring atoms (e.g., 3-10 members), a specified number of heteroatoms (e.g., 1, 2, or 3), and a specified type of heteroatoms (1, 2, or 3 of N, O, and S), which is a monocyclic, bridged, or spirocyclic group, and at least one of the rings contains one or more "double bonds". The "heterocycloalkenyl" does not contain a closed cyclic conjugated system, but only isolated π bonds or discontinuous conjugated π bonds; for example wait.
术语“氧代”是指取代非氧原子上的氢或孤对电子被氧取代,例如,被氧代后为 被氧代后为 The term "oxo" refers to the replacement of hydrogen or lone pair electrons on non-oxygen atoms with oxygen, e.g. After being oxidized After being oxidized
术语“药学上可接受的辅料”是指生产药品和调配处方时使用的赋形剂和附加剂,是除活性成分以外,包含在药物制剂中的所有物质。The term "pharmaceutically acceptable excipients" refers to excipients and additives used in the production of medicines and the preparation of prescriptions. It is all substances contained in pharmaceutical preparations except the active ingredients.
术语“治疗”指治疗性疗法。涉及具体病症时,治疗指:(1)缓解疾病或者病症的一种或多种生物学表现,(2)干扰(a)导致或引起病症的生物级联中的一个或多个点或(b)病症的一种或多种生物学表现,(3)改善与病症相关的一种或多种症状、影响或副作用,或者与病症或其治疗相关的一种或多种症状、影响或副作用,或(4)减缓病症或者病症的一种或多种生物学表现发展。The term "treat" refers to therapeutic treatment. When referring to a specific condition, treatment means: (1) ameliorating the disease or one or more biological manifestations of the condition, (2) interfering with (a) one or more points in the biological cascade leading to or causing the condition or (b) one or more biological manifestations of the condition, (3) ameliorating one or more symptoms, effects, or side effects associated with the condition or one or more symptoms, effects, or side effects associated with the condition or its treatment, or (4) slowing the progression of the condition or one or more biological manifestations of the condition.
术语“预防”是指获得或发生疾病或障碍的风险降低。The term "prevent" refers to the reduction of the risk of acquiring or developing a disease or disorder.
术语“治疗有效量”是指在给予患者时足以有效治疗本文所述疾病或病症的化合物的量。“治疗有效量”将根据化合物、病症及其严重度、以及欲治疗患者的年龄而变化,但可由本领域技术人员根据需要进行调整。The term "therapeutically effective amount" refers to an amount of a compound that is sufficient to effectively treat a disease or condition described herein when administered to a patient."Therapeutically effective amount" will vary depending on the compound, the condition and its severity, and the age of the patient to be treated, but can be adjusted as needed by those skilled in the art.
术语“患者”是指根据本发明的实施例,即将或已经接受了该化合物或组合物给药的任何动物,哺乳动物为优,人类最优。The term "patient" refers to any animal, preferably a mammal, most preferably a human, who is about to be or has been administered the compound or composition according to the embodiments of the present invention.
术语“哺乳动物”包括任何哺乳动物。哺乳动物的实例包括但不限于牛、马、羊、猪、猫、狗、小鼠、大鼠、家兔、豚鼠、猴、人等,以人类为最优。The term "mammal" includes any mammal. Examples of mammals include, but are not limited to, cows, horses, sheep, pigs, cats, dogs, mice, rats, rabbits, guinea pigs, monkeys, humans, etc., with humans being the most preferred.
在不违背本领域常识的基础上,上述各优选条件,可任意组合,即得本发明各较佳实例。Without violating the common sense in the art, the above-mentioned preferred conditions can be arbitrarily combined to obtain the preferred embodiments of the present invention.
本发明所用试剂和原料均市售可得。The reagents and raw materials used in the present invention are commercially available.
本发明的积极进步效果在于:本发明提供的噻唑烷二酮类化合物针对MT结构域底物的结合口袋特性,设计并合成,对DNMT3A具有良好的抑制活性。通过体外生化和细胞实验,证明它们具有低毒性、高抑制率和高特异性。这些化合物不仅能够用于进一步阐明DNMT3A结构及其DNA甲基化功能的分子机制,而且为DNA甲基化相关疾病尤其是急性髓系白血病AML等癌症提供新型药物。The positive and progressive effects of the present invention are that the thiazolidinedione compounds provided by the present invention are designed and synthesized for the binding pocket characteristics of the MT domain substrate, and have good inhibitory activity against DNMT3A. Through in vitro biochemical and cell experiments, they are proven to have low toxicity, high inhibition rate and high specificity. These compounds can not only be used to further clarify the molecular mechanism of DNMT3A structure and its DNA methylation function, but also provide new drugs for DNA methylation-related diseases, especially cancers such as acute myeloid leukemia AML.
图1:A549、MOLM-13和Thp-1细胞系中化合物IC50的统计分析(ns表示无显著性差异(no significance,p>0.05),*表示p<0.05,**表p<0.01,***表示p<0.001,****表示p<0.0001)。Figure 1: Statistical analysis of IC50 of compounds in A549, MOLM-13 and Thp-1 cell lines (ns indicates no significance (p>0.05), * indicates p<0.05, ** indicates p<0.01, *** indicates p<0.001, **** indicates p<0.0001).
图2:蛋白印迹法鉴定J1-890和J1-890Dnmt3a-/-细胞系中DNMT3A蛋白表达情况。 Figure 2: Western blotting was used to identify the expression of DNMT3A protein in J1-890 and J1-890Dnmt3a-/- cell lines.
图3:J1-890Dnmt3a-/-和J1-890细胞系中化合物IC50的统计分析。Figure 3: Statistical analysis of compound IC50 in J1-890Dnmt3a-/- and J1-890 cell lines.
下面通过实施例的方式进一步说明本发明,但并不因此将本发明限制在所述实施例范围之中。下列实施例中未注明具体条件的实验方法,按照常规方法和条件,或按照商品说明书选择。The present invention is further described below by way of examples, but the present invention is not limited to the scope of the examples. The experimental methods in the following examples without specifying specific conditions are carried out according to conventional methods and conditions, or selected according to the product specifications.
中间体制备例1:C1的制备
Intermediate Preparation Example 1: Preparation of C1
C1:将5-甲醛基呋喃-2-硼酸C1-1(140mg,1mmol)与3-溴苯甲酸C1-2(201mg,1.1mmol)溶于DMF溶液(2ml)中,再加入K2CO3(138mg,2mmol),最后加入(pph3)2pdcl2(3.5mg,0.005mmol),加热到100℃回流5h。反应结束后,冷却至室温,用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体C1(110mg,51%)。C1: 5-Formaldehydefuran-2-boronic acid C1-1 (140 mg, 1 mmol) and 3-bromobenzoic acid C1-2 (201 mg, 1.1 mmol) were dissolved in DMF solution (2 ml), K 2 CO 3 (138 mg, 2 mmol) was added, and finally (pph 3 ) 2 pdcl 2 (3.5 mg, 0.005 mmol) was added, and heated to 100° C. and refluxed for 5 h. After the reaction was completed, it was cooled to room temperature, extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain yellow solid C1 (110 mg, 51%).
HRMS计算出的[C2H8O4]+[M+H]+质荷比216.0423,LC-MS显示[C2H8O4]+[M+H]+质荷比217.4。HRMS calculated mass-to-charge ratio of [C 2 H 8 O 4 ] + [M+H] + 216.0423, LC-MS showed mass-to-charge ratio of [C 2 H 8 O 4 ] + [M+H] + 217.4.
1H NMR(500MHz,DMSO)δ9.66(s,1H),8.39(s,1H),8.14(d,J=7.8Hz,1H),8.01(d,J=7.7Hz,1H),7.75–7.61(m,2H),7.44(d,J=3.7Hz,1H). 1 H NMR (500MHz, DMSO) δ9.66 (s, 1H), 8.39 (s, 1H), 8.14 (d, J = 7.8Hz, 1H), 8.01 (d, J = 7.7Hz, 1H), 7.75– 7.61(m,2H),7.44(d,J=3.7Hz,1H).
中间体制备例2:C2的制备
Intermediate Preparation Example 2: Preparation of C2
C2:将2,4-二甲基苯胺C2-1(1.2ml,10mmol)溶于水(10ml)中,通过注射器加入二硫化碳(1.8ml,25mmol),然后加入K2CO3(2.7g,20mmol),在室温下过夜搅拌。第二天,加入Na2S4O8(2.38g,10mmol),K2CO3(1.38g,10mmol),加水(2ml),搅拌2h。反应结束后,用PE萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到白色固体(900mg,75%)。将得到的产物(149mg,1mmol)溶于DCM中,加入巯基乙酸甲酯(106mg,1.0mmol),再加入三乙胺(40μl,0.3mmol),反应3h。反应结束后,用PE萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体C2(201mg,85%)。C2: 2,4-dimethylaniline C2-1 (1.2ml, 10mmol) was dissolved in water (10ml), carbon disulfide (1.8ml, 25mmol) was added via a syringe, and then K 2 CO 3 (2.7g, 20mmol) was added, and the mixture was stirred overnight at room temperature. The next day, Na 2 S 4 O 8 (2.38g, 10mmol), K 2 CO 3 (1.38g, 10mmol) were added, and water (2ml) was added, and the mixture was stirred for 2h. After the reaction was completed, PE was used for extraction three times, and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain a white solid (900mg, 75%). The obtained product (149mg, 1mmol) was dissolved in DCM, methyl thioglycolate (106mg, 1.0mmol) was added, and triethylamine (40μl, 0.3mmol) was added, and the reaction was carried out for 3h. After the reaction was completed, the mixture was extracted three times with PE, and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid C2 (201 mg, 85%) was obtained.
HRMS计算出的[C11H11NOS2]+[M+H]+质荷比237.0282。LC-MS显示的[C11H11NOS2]+[M+H]+质荷比238.3。HRMS calculated mass-to-charge ratio for [C 11 H 11 NOS 2 ] + [M+H] + 237.0282. LC-MS showed mass-to-charge ratio for [C 11 H 11 NOS 2 ] + [M+H] + 238.3.
1H NMR(500MHz,CDCl3)δ7.13–7.06(m,2H),6.88(d,J=7.9Hz,1H),4.15–4.12(m,2H),2.31(s,3H),2.01(s,3H). 1 H NMR (500MHz, CDCl 3 ) δ7.13–7.06 (m, 2H), 6.88 (d, J = 7.9Hz, 1H), 4.15–4.12 (m, 2H), 2.31 (s, 3H), 2.01 ( s,3H).
实施例1:化合物1
Example 1: Compound 1
将C1(216mg,1.0mmol)与C2(237mg,1.0mmol)溶于乙醇(2ml)中,加入四甲基哌啶3滴,加热到80℃回流,反应4h。反应结束后,减压蒸发。加入DCM和H2O萃取三次,合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体1(391mg,90%)。Dissolve C1 (216 mg, 1.0 mmol) and C2 (237 mg, 1.0 mmol) in ethanol (2 ml), add 3 drops of tetramethylpiperidine, heat to 80°C and reflux, and react for 4 hours. After the reaction is completed, evaporate under reduced pressure. Add DCM and H 2 O to extract three times, combine the organic phases, evaporate under reduced pressure, and purify with a Flash column to obtain a yellow solid 1 (391 mg, 90%).
HRMS计算出的[C23H17NO4S2]+[M+H]+质荷比435.0599。HRMS calculated mass-to -charge ratio for [C23H17NO4S2 ] + [ M+ H ] + : 435.0599.
LC-MS显示的[C23H17NO4S2]+[M+H]+质荷比435.3。LC-MS showed a mass-to-charge ratio of [C 23 H 17 NO 4 S 2 ] + [M+H] + of 435.3.
1H NMR(500MHz,DMSO)δ8.45(d,J=1.7Hz,1H),8.15–8.11(m,1H),8.00(d,J=7.7Hz,1H),7.77(d,J=1.5Hz,1H),7.73(d,J=7.8Hz,1H),7.50(dd,J=3.8,1.8Hz,1H),7.43(d,J=3.8Hz,1H),7.24(s,1H),7.21–7.18(m,2H),2.36(s,3H),2.02(s,3H). 1 H NMR (500MHz, DMSO) δ8.45(d,J=1.7Hz,1H),8.15–8.11(m,1H),8.00(d,J=7.7Hz,1H),7.77(d,J=1.5Hz, 1H),7.73(d,J=7 .8Hz,1H),7.50(dd,J=3.8,1.8Hz,1H),7.43(d,J=3.8Hz,1H),7.24(s,1H),7.21–7.18(m,2H),2.36( s,3H),2.02(s,3H).
实施例2:化合物4
Example 2: Compound 4
将1(43.5mg,0.1mmol)溶到丙酮(4ml)中,加入碘乙烷(20μl,0.25mmol),然后再加K2CO3(69.1mg,0.5mmol),室温搅拌过夜。反应结束后,减压蒸发。加入DCM和H2O萃取三次,合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体4(41mg,91%)。1 (43.5 mg, 0.1 mmol) was dissolved in acetone (4 ml), iodoethane (20 μl, 0.25 mmol) was added, and then K 2 CO 3 (69.1 mg, 0.5 mmol) was added, and stirred at room temperature overnight. After the reaction was completed, it was evaporated under reduced pressure. DCM and H 2 O were added to extract three times, and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 4 (41 mg, 91%) was obtained.
HRMS计算出的[C25H21NO4S2]+[M+H]+质荷比463.0912。HRMS calculated mass-to-charge ratio for [ C25H21NO4S2 ] + [M + H ] + : 463.0912.
LC-MS显示的[C25H21NO4S2]+[M+H]+质荷比464.3。LC-MS showed a mass-to-charge ratio of [C 25 H 21 NO 4 S 2 ] + [M+H] + of 464.3.
1H NMR(500MHz,DMSO)δ8.46(t,J=1.8Hz,1H),8.16(dt,J=7.9,1.5Hz,1H),8.01(dt,J=7.8,1.4Hz,1H),7.76(s,1H),7.72(t,J=7.8Hz,1H),7.48(d,J=3.8Hz,1H),7.42(d,J=3.8Hz,1H),7.24(s,1H),7.19(d,J=2.6Hz,2H),4.38(q,J=7.1Hz,2H),2.36(s,3H),2.02(s,3H),1.42–1.39(m,3H). 1 H NMR (500MHz, DMSO) δ8.46(t,J=1.8Hz,1H),8.16(dt,J=7.9,1.5Hz,1H),8.01(dt,J=7.8,1.4Hz,1H),7.76( s,1H),7.72(t,J=7.8Hz,1H),7.48( d,J=3.8Hz,1H),7.42(d,J=3.8Hz,1H),7.24(s,1H),7.19(d,J=2.6Hz,2 H),4.38(q,J=7.1Hz,2H),2.36(s,3H),2.02(s,3H),1.42–1.39(m,3H).
实施例3:化合物5:
Example 3: Compound 5:
将1(43.5mg,0.1mmol)溶于DMF(3ml)中,加入异丙胺(7.2mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体5(30mg,61%)。1 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), and isopropylamine (7.2 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 5 (30 mg, 61%) was obtained.
HRMS计算出的[C27H26N2O3S2]+[M+H]+质荷比490.1385。HRMS calculated mass-to - charge ratio for [ C27H26N2O3S2 ] + [M + H ] + : 490.1385.
LC-MS显示的[C27H26N2O3S2]+[M+H]+质荷比491.4。 LC-MS showed a mass-to-charge ratio of [C 27 H 26 N 2 O 3 S 2 ] + [M+H] + of 491.4.
1H NMR(500MHz,DMSO)δ8.42–8.29(m,2H),8.01(dt,J=7.8,1.4Hz,1H),7.88(dt,J=7.8,1.5Hz,1H),7.78(s,1H),7.67(t,J=7.8Hz,1H),7.44(s,2H),7.26–7.15(m,3H),4.13(dq,J=13.5,6.5Hz,1H),2.36(s,3H),2.02(s,3H),1.21(d,J=6.6Hz,7H). 1 H NMR (500MHz, DMSO) δ8.42–8.29(m,2H),8.01(dt,J=7.8,1.4Hz,1H),7.88(dt,J=7.8,1.5Hz,1H),7.78(s,1H ),7.67(t,J=7 .8Hz,1H),7.44(s,2H),7.26–7.15(m,3H),4.13(dq,J=13.5,6.5Hz,1H),2.36(s,3H),2.02(s,3H), 1.21(d,J=6.6Hz,7H).
实施例4:化合物6:
Example 4: Compound 6:
将1(43.5mg,0.1mmol)溶于DMF(3ml)中,加入正丁胺(7.2mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体6(30mg,61%)。1 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), and n-butylamine (7.2 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain yellow solid 6 (30 mg, 61%).
HRMS计算出的[C27H26N2O3S2]+[M+H]+质荷比490.6360。HRMS calculated mass-to - charge ratio for [ C27H26N2O3S2 ] + [M + H ] + : 490.6360.
LC-MS显示的[C27H26N2O3S2]+[M+H]+质荷比491.2。LC-MS showed a mass-to-charge ratio of [C 27 H 26 N 2 O 3 S 2 ] + [M+H] + of 491.2.
1H NMR(500MHz,DMSO)δ8.59(t,J=5.6Hz,1H),8.32(t,J=1.9Hz,1H),8.01(dt,J=7.7,1.5Hz,1H),7.87(dt,J=7.8,1.4Hz,1H),7.78(s,1H),7.68(t,J=7.8Hz,1H),7.46–7.42(m,2H),7.27–7.15(m,3H),3.33–3.29(m,2H),2.36(s,3H),2.02(s,3H),1.60–1.51(m,2H),1.41–1.33(m,2H),0.92(t,J=7.3Hz,3H). 1 H NMR(500MHz,DMSO)δ8.59(t,J=5.6Hz,1H),8.32(t,J=1.9Hz,1H),8.01(dt, J=7.7,1.5Hz,1H),7.87(dt,J=7.8,1.4Hz,1H),7.78(s,1H),7.68(t,J=7.8H z,1H),7.46–7.42(m,2H),7.27–7.15(m,3H),3.33–3.29(m,2H),2.36(s,3H) ),2.02(s,3H),1.60–1.51(m,2H),1.41–1.33(m,2H),0.92(t,J=7.3Hz,3H).
实施例5:化合物7:
Example 5: Compound 7:
将C3(43.5mg,0.1mmol)溶于DMF(3ml)中,加入2-甲氧基苯胺(12.2mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体7(33mg,61%)。C3 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), 2-methoxyaniline (12.2 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 7 (33 mg, 61%) was obtained.
HRMS计算出的[C30H24N2O4S2]+[M+H]+质荷比540.1177。HRMS calculated mass-to-charge ratio for [C 30 H 24 N 2 O 4 S 2 ] + [M+H] + 540.1177.
LC-MS显示的[C30H24N2O4S2]+[M+H]+质荷比541.3。LC-MS showed a mass-to-charge ratio of [C 30 H 24 N 2 O 4 S 2 ] + [M+H] + of 541.3.
1H NMR(500MHz,DMSO)δ9.64(s,1H),8.45(t,J=1.8Hz,1H),8.12–7.99(m,2H),7.82–7.72(m,3H),7.51–7.43(m,2H),7.25–7.10(m,5H),7.00(td,J=7.6,1.4Hz,1H),3.85(s,3H),2.36(s,3H),2.05(d,J=26.9Hz,3H). 1 H NMR (500MHz, DMSO) δ9.64 (s, 1H), 8.45 (t, J = 1.8Hz, 1H), 8.12–7.99 (m, 2H), 7.82–7.72 (m, 3H), 7.51–7.43 (m,2H),7.25–7.10(m,5H),7.00(td,J=7.6,1.4Hz,1H),3.85(s,3H),2.36(s,3H),2.05(d,J=26.9 Hz,3H).
实施例6:化合物8
Example 6: Compound 8
将C3(43.5mg,0.1mmol)溶于DMF(3ml)中,加入对硝基苯胺(13.7mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体(34mg,61%)。HRMS计算出的[C29H21N3O5S2]+[M+H]+质荷比555.0923。LC-MS显示的[C29H21N3O5S2]+[M+H]+质荷比556.4。C3 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), p-nitroaniline (13.7 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to give a yellow solid (34 mg, 61%). The mass-to-charge ratio of [C 29 H 21 N 3 O 5 S 2 ] + [M+H] + calculated by HRMS was 555.0923. The mass-to-charge ratio of [C 29 H 21 N 3 O 5 S 2 ] + [M+H] + shown by LC-MS was 556.4.
1H NMR(500MHz,DMSO)δ13.79(s,1H),8.77(dd,J=4.5,1.4Hz,1H),8.54(dd,J=8.4,1.4Hz,1H),8.44(d,J=1.9Hz,1H),8.16–8.07(m,1H),8.02–7.98(m,1H),7.77(s,1H),7.72(t,J=7.8Hz,1H),7.54–7.41(m,3H),7.26–7.15(m,3H),2.36(s,3H),2.02(d,J=4.9Hz,3H). 1 H NMR (500MHz, DMSO) δ13.79(s,1H),8.77(dd,J=4.5,1.4Hz,1H),8.54(dd,J=8.4,1.4Hz,1H),8.44(d,J=1.9 Hz,1H),8.16–8.07(m,1H ),8.02–7.98(m,1H),7.77(s,1H),7.72(t,J=7.8Hz,1H),7.54–7.41(m,3H),7.26–7.15(m,3H),2.36( s,3H),2.02(d,J=4.9Hz,3H).
实施例7:化合物9:
Example 7: Compound 9:
将C3(43.5mg,0.1mmol)溶于DMF(3ml)中,加入炔丙胺(5.4mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体(28.7mg,61%)。C3 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), propargylamine (5.4 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain a yellow solid (28.7 mg, 61%).
HRMS计算出的[C26H20N2O3S2]+[M+H]+质荷比472.0915。HRMS calculated mass-to - charge ratio for [ C26H20N2O3S2 ] + [M + H ] + : 472.0915.
LC-MS显示的[C26H20N2O3S2]+[M+H]+质荷比473.2。LC-MS showed a mass-to-charge ratio of [C 26 H 20 N 2 O 3 S 2 ] + [M+H] + of 473.2.
1H NMR(500MHz,DMSO)δ9.10(t,J=5.6Hz,1H),8.37(t,J=1.8Hz,1H),8.04(dt,J=7.8,1.4Hz,1H),7.90(dt,J=7.7,1.4Hz,1H),7.78(s,1H),7.71(t,J=7.8Hz,1H),7.44(s,2H),7.25–7.16(m,3H),4.12(dd,J=5.5,2.5Hz,2H),3.17(t,J=2.5Hz,1H),2.36(s,3H),2.02(s,3H). 1 H NMR (500MHz, DMSO) δ9.10(t,J=5.6Hz,1H),8.37(t,J=1.8Hz,1H),8.04(dt,J=7.8,1.4Hz,1H),7.90(dt, J=7.7,1.4Hz,1H),7.78(s,1H ),7.71(t,J=7.8Hz,1H),7.44(s,2H),7.25–7.16(m,3H),4.12(dd,J=5.5,2.5Hz,2H),3.17(t,J= 2.5Hz,1H),2.36(s,3H),2.02(s,3H).
实施例8:化合物10:
Example 8: Compound 10:
将C3(43.5mg,0.1mmol)溶于DMF(3ml)中,加入苯胺(9.2mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体(31.1mg,61%)。C3 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), and aniline (9.2 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain a yellow solid (31.1 mg, 61%).
HRMS计算出的[C29H22N2O3S2]+[M+H]+质荷比510.1072。HRMS calculated mass-to-charge ratio for [C 29 H 22 N 2 O 3 S 2 ] + [M+H] + 510.1072.
LC-MS显示的[C29H22N2O3S2]+[M+H]+质荷比511.3。LC-MS showed a mass-to-charge ratio of [C 29 H 22 N 2 O 3 S 2 ] + [M+H] + of 511.3.
1H NMR(500MHz,DMSO)δ10.44(s,1H),8.46–8.35(m,1H),8.13–8.05(m,1H),7.98(dd,J=20.7,7.8Hz,1H),7.85–7.72(m,4H),7.52–7.42(m,2H),7.38(t,J=7.9Hz,2H),7.26–7.11(m,4H),2.36(s,3H),2.02(d,J=3.7Hz,3H). 1 H NMR(500MHz,DMSO)δ10.44(s,1H),8.46–8.35(m,1H),8.13–8.05(m,1H),7.98(dd,J=20.7,7.8Hz,1H),7.85– 7.72(m,4H),7.52–7.42(m,2H),7.38(t,J=7.9Hz,2H),7.26–7.11(m,4H),2.36(s,3H),2.02(d,J= 3.7Hz,3H).
实施例9:化合物11:
Example 9: Compound 11:
将C3(43.5mg,0.1mmol)溶于DMF(3ml)中,加入对甲基苯胺(10.6mg,0.1mmol),然后加入HATU(38mg,0.1mmol),DIPEA(17.3μl,0.1mmol),室温搅拌3h。用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体11(32mg,61%)。C3 (43.5 mg, 0.1 mmol) was dissolved in DMF (3 ml), p-methylaniline (10.6 mg, 0.1 mmol) was added, followed by HATU (38 mg, 0.1 mmol) and DIPEA (17.3 μl, 0.1 mmol), and the mixture was stirred at room temperature for 3 h. The mixture was extracted three times with DCM:H 2 O (1:20), and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 11 (32 mg, 61%) was obtained.
HRMS计算出的[C30H24N2O3S2]+[M+H]+质荷比524.1228。HRMS calculated mass-to-charge ratio for [C 30 H 24 N 2 O 3 S 2 ] + [M+H] + 524.1228.
LC-MS显示的[C30H24N2O3S2]+[M+H]+质荷比525.3。LC-MS showed a mass-to-charge ratio of [C 30 H 24 N 2 O 3 S 2 ] + [M+H] + of 525.3.
1H NMR(500MHz,DMSO)δ10.37(s,1H),8.43(t,J=1.8Hz,1H),8.08(dt,J=7.8,1.4Hz,1H),7.99(dt,J=7.9,1.4Hz,1H),7.80–7.67(m,4H),7.48(dd,J=24.8,3.7Hz,2H),7.27–7.15(m,5H),2.36(s,3H),2.29(s,3H),2.02(s,3H). 1 H NMR (500MHz, DMSO) δ10.37(s,1H),8.43(t,J=1.8Hz,1H),8.08(dt,J=7.8,1.4Hz,1H),7.99(dt,J=7.9,1.4 Hz,1 H),7.80–7.67(m,4H),7.48(dd,J=24.8,3.7Hz,2H),7.27–7.15(m,5H),2.36(s,3H),2.29(s,3H),2.02 (s,3H).
实施例10:化合物12:
Example 10: Compound 12:
将5-甲醛基呋喃-2-硼酸(140mg,1mmol)与3-溴二羟基吡啶(172mg,1.1mmol)溶于DMF溶液(2ml)中,再加入K2CO3(138mg,2mmol),最后加入(pph3)2pdcl2(3.5mg,0.005mmol),加热到100℃回流5h。反应结束后,冷却至室温,用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体(96mg,51%)。然后将产物(96mg,0.5mmol)与C2(118.5mg,0.5mmol)溶于乙醇(2ml)中,加入四甲基哌啶3滴,加热到80℃回流,反应4h。反应结束后,减压蒸发。加入DCM和H2O萃取三次,合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体12(183.6mg,90%)。5-Formaldehyde furan-2-boronic acid (140 mg, 1 mmol) and 3-bromodihydroxypyridine (172 mg, 1.1 mmol) were dissolved in DMF solution (2 ml), K2CO3 (138 mg, 2 mmol) was added, and (pph3)2PDCl2 (3.5 mg, 0.005 mmol) was added, and the mixture was heated to 100°C and refluxed for 5 h. After the reaction was completed, the mixture was cooled to room temperature, extracted three times with DCM:H2O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain a yellow solid (96 mg, 51%). The product (96 mg, 0.5 mmol) and C2 (118.5 mg, 0.5 mmol) were then dissolved in ethanol (2 ml), 3 drops of tetramethylpiperidine were added, and the mixture was heated to 80°C and refluxed for 4 h. After the reaction was completed, the mixture was evaporated under reduced pressure. DCM and H2O were added to extract three times, and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 12 (183.6 mg, 90%) was obtained.
HRMS计算出的[C20H16N2O3S2]+[M+H]+质荷比408.0602。HRMS calculated mass-to-charge ratio for [C 20 H 16 N 2 O 3 S 2 ] + [M+H] + 408.0602.
LC-MS显示的[C20H16N2O3S2]+[M+H]+质荷比409.2。LC-MS showed a mass-to-charge ratio of [C 20 H 16 N 2 O 3 S 2 ] + [M+H] + of 409.2.
1H NMR(500MHz,DMSO)δ8.03(dd,J=7.2,2.1Hz,1H),7.74(s,1H),7.57(dd,J=6.4,2.1Hz,1H),7.50(d,J=3.7Hz,1H),7.39(d,J=3.7Hz,1H),7.24(s,1H),7.18(s,2H),6.58(t,J=6.8Hz,1H),2.35(s,3H),2.01(s,3H). 1 H NMR (500MHz, DMSO) δ8.03(dd,J=7.2,2.1Hz,1H),7.74(s,1H),7.57(dd,J=6.4,2.1Hz,1H),7.50(d,J=3.7 Hz,1H),7.39(d,J=3.7Hz,1H),7.24(s,1H),7.18(s,2H),6.58(t,J=6.8Hz,1H),2.35(s,3H), 2.01(s,3H).
实施例11:化合物13:
Example 11: Compound 13:
将5-甲醛基呋喃-2-硼酸(140mg,1mmol)与4-溴吡啶-2-酮(172mg,1.1mmol)溶于DMF溶液(2ml)中,再加入K2CO3(138mg,2mmol),最后加入(pph3)2pdcl2(3.5mg,0.005mmol),加热到100℃回流5h。反应结束后,冷却至室温,用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体(96mg,51%)。然后将产物(96mg,0.5mmol)与C2(118.5mg,0.5mmol)溶于乙醇(2ml)中,加入四甲基哌啶3滴,加热到80℃回流,反应4h。反应结束后,减压蒸发。加入DCM和H2O萃取三次,合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体13(183.6mg,90%)。5-Formaldehyde furan-2-boronic acid (140 mg, 1 mmol) and 4-bromopyridin-2-one (172 mg, 1.1 mmol) were dissolved in DMF solution (2 ml), K 2 CO 3 (138 mg, 2 mmol) was added, and finally (pph 3 ) 2 pdcl 2 (3.5 mg, 0.005 mmol) was added, and the mixture was heated to 100°C and refluxed for 5 h. After the reaction was completed, the mixture was cooled to room temperature, extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain a yellow solid (96 mg, 51%). The product (96 mg, 0.5 mmol) and C2 (118.5 mg, 0.5 mmol) were then dissolved in ethanol (2 ml), 3 drops of tetramethylpiperidine were added, and the mixture was heated to 80°C and refluxed for 4 h. After the reaction was completed, the mixture was evaporated under reduced pressure. DCM and H2O were added to extract three times, and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 13 (183.6 mg, 90%) was obtained.
HRMS计算出的[C20H16N2O3S2]+[M+H]+质荷比408.0602。The mass-to-charge ratio of [C 20 H 16 N 2 O 3 S 2 ]+[M+H]+ calculated by HRMS is 408.0602.
LC-MS显示的[C20H16N2O3S2]+[M+H]+质荷比409.6。LC-MS showed a mass-to-charge ratio of [C 20 H 16 N 2 O 3 S 2 ]+[M+H]+ of 409.6.
1H NMR(500MHz,DMSO)δ7.76(s,1H),7.57–7.51(m,2H),7.40(d,J=3.8Hz,1H),7.24(d,J=1.6Hz,1H),7.22–7.16(m,2H),6.75(d,J=1.7Hz,1H),6.65(dd,J=6.8,1.8Hz,1H),2.35(s,3H),2.02(s,3H). 1 H NMR(500MHz,DMSO)δ7.76(s,1H),7.57–7.51(m,2H),7.40(d,J=3.8Hz,1H),7.24(d,J=1.6Hz,1H) ,7.22–7.16(m,2H),6.75(d,J=1.7Hz,1H),6.65(dd,J=6.8,1.8Hz,1H),2.35(s,3H),2.02(s,3H).
实施例12:化合物14:
Example 12: Compound 14:
将5-甲醛基呋喃-2-硼酸(140mg,1mmol)与7-溴异喹啉-1-酮(222mg,1.1mmol)溶于DMF溶液(2ml)中,再加入K2CO3(138mg,2mmol),最后加入(pph3)2pdcl2(3.5mg,0.005mmol),加热到100℃回流5h。反应结束后,冷却至室温,用DCM:H2O(1:20)萃取三次,并合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体(121.9mg,51%)。然后将产物(121mg,0.5mmol)与C2(118mg,0.5mmol)溶于乙醇(2ml)中,加入四甲基哌啶3滴,加热到80℃回流,反应4h。反应结束后,减压蒸发。加入DCM和H2O萃取三次,合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体14(206.1mg,90%)。5-Formaldehyde furan-2-boronic acid (140 mg, 1 mmol) and 7-bromoisoquinolin-1-one (222 mg, 1.1 mmol) were dissolved in DMF solution (2 ml), K 2 CO 3 (138 mg, 2 mmol) was added, and finally (pph 3 ) 2 pdcl 2 (3.5 mg, 0.005 mmol) was added, and the mixture was heated to 100°C and refluxed for 5 h. After the reaction was completed, the mixture was cooled to room temperature, extracted three times with DCM:H 2 O (1:20), and the organic phases were combined, evaporated under reduced pressure, and purified by Flash column to obtain a yellow solid (121.9 mg, 51%). The product (121 mg, 0.5 mmol) and C2 (118 mg, 0.5 mmol) were then dissolved in ethanol (2 ml), 3 drops of tetramethylpiperidine were added, and the mixture was heated to 80°C and refluxed for 4 h. After the reaction was completed, the mixture was evaporated under reduced pressure. DCM and H 2 O were added for extraction three times, and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 14 (206.1 mg, 90%) was obtained.
HRMS计算出的[C25H18N2O3S2]+[M+H]+质荷比458.0759。HRMS calculated mass-to - charge ratio for [ C25H18N2O3S2 ] + [M + H ] + : 458.0759.
LC-MS显示的[C25H18N2O3S2]+[M+H]+质荷比459.1。LC-MS showed a mass-to-charge ratio of [C 25 H 18 N 2 O 3 S 2 ] + [M+H] + of 459.1.
1H NMR(500MHz,DMSO)δ11.45(d,J=5.8Hz,1H),8.66(d,J=1.8Hz,1H),8.17(dd,J=8.3,2.0Hz,1H),7.84(d,J=8.4Hz,1H),7.77(s,1H),7.51(d,J=3.7Hz,1H),7.44(d,J=3.8Hz,1H),7.29–7.16(m,4H),6.61(d,J=7.1Hz,1H),2.36(s,3H),2.03(s,3H). 1 H NMR (500MHz, DMSO) δ11.45(d,J=5.8Hz,1H),8.66(d,J=1.8Hz,1H),8.17(dd,J=8.3,2.0Hz,1H),7.84(d, J=8.4Hz,1H),7.7 7(s,1H),7.51(d,J=3.7Hz,1H),7.44(d,J=3.8Hz,1H),7.29–7.16(m,4H),6.61(d,J=7.1Hz,1H ),2.36(s,3H),2.03(s,3H).
实施例13:化合物15:
Example 13: Compound 15:
将5-((4-(2-(甲基-2-吡啶氨基)乙氧基)苯基)甲基)-2,4-噻唑烷二酮(35.7mg,0.1mmol)溶于甲苯(3.3ml)中,加入二苯碘盐(101.1mg,3.0mmol),Cu(NO3)2(5.8,0.05mmol),最后加入TEA(7μl),加热到70℃,反应8h。反应结束后,减压蒸发,用DCM和H2O萃取三次,合并有机相,减压蒸发,经过Flash柱纯化后得到黄色固体15(36.9mg,80%)。5-((4-(2-(methyl-2-pyridinylamino)ethoxy)phenyl)methyl)-2,4-thiazolidinedione (35.7 mg, 0.1 mmol) was dissolved in toluene (3.3 ml), and diphenyliodonium salt (101.1 mg, 3.0 mmol) and Cu(NO 3 ) 2 (5.8, 0.05 mmol) were added, and finally TEA (7 μl) was added, and the mixture was heated to 70° C. and reacted for 8 h. After the reaction was completed, the mixture was evaporated under reduced pressure, extracted three times with DCM and H 2 O, and the organic phases were combined and evaporated under reduced pressure. After purification by Flash column, a yellow solid 15 (36.9 mg, 80%) was obtained.
HRMS计算出的[C26H27N3O3S]+[M+H]+质荷比461.1773。HRMS calculated mass-to-charge ratio for [C 26 H 27 N 3 O 3 S] + [M+H] + 461.1773.
LC-MS显示的[C26H27N3O3S]+[M+H]+质荷比462.4。LC-MS showed a mass-to-charge ratio of [C 26 H 27 N 3 O 3 S] + [M+H] + of 462.4.
1H NMR(500MHz,CDCl3)δ8.25(s,1H),7.86(s,1H),7.23–6.99(m,4H),6.99–6.62(m,5H),4.73–4.12(m,5H),3.54–3.39(m,3H),3.26(ddd,J=55.9,14.1,8.4Hz,2H),2.35(s,3H),1.98(d,J=122.2Hz,3H). 1 H NMR (500MHz, CDCl 3 )δ8.25(s,1H),7.86(s,1H),7.23–6.99(m,4H),6.99–6.62(m,5H),4.73–4.12(m,5H),3.5 4–3.39(m,3H),3.26(ddd,J=55.9,14.1,8.4Hz,2H),2.35(s,3H),1.98(d,J=122.2Hz,3H).
效果实施例部分Effect Embodiment Section
一、活性测定方法:1. Activity determination method:
(一)利用MTase-GloTMMethyltransferase Assay(V7601)试剂盒测定化合物对甲基化酶的抑制情况。(I) The inhibition of the compounds on methyltransferase was determined using the MTase-Glo TM Methyltransferase Assay (V7601) kit.
1、每3μL合适浓度的蛋白与1μL合适浓度的化合物混匀,冰上静置15min。1. Mix 3 μL of protein of appropriate concentration with 1 μL of compound of appropriate concentration and let stand on ice for 15 min.
2、384孔板每孔加入4μL底物(见表1),再加入4μL蛋白与化合物的混合液。2200rpm离心30s,再250rpm震荡90s,37℃反应1h。4x反应缓冲液配方为:80mM Tris-HCl,pH 8.0,200mM NaCl,4mM EDTA,12mM MgCl2,0.4mg/mL BSA,4mM DTT。2. Add 4 μL of substrate (see Table 1) to each well of a 384-well plate, and then add 4 μL of a mixture of protein and compound. Centrifuge at 2200 rpm for 30 s, shake at 250 rpm for 90 s, and react at 37°C for 1 h. The formula of 4x reaction buffer is: 80 mM Tris-HCl, pH 8.0, 200 mM NaCl, 4 mM EDTA, 12 mM MgCl2, 0.4 mg/mL BSA, 4 mM DTT.
表1甲基化反应底物体系
Table 1 Methylation reaction substrate system
3、每孔加入2μL 5x MTase-GloTMReagent,2200rpm离心30s,再250rpm震荡90s,常温反应30min。3. Add 2 μL 5x MTase-Glo TM Reagent to each well, centrifuge at 2200 rpm for 30 s, shake at 250 rpm for 90 s, and react at room temperature for 30 min.
4、每孔加入10μL MTase-GloTMDetection Solution,2200rpm离心30s,再250rpm震荡90s,常温反应30min。4. Add 10 μL MTase-Glo TM Detection Solution to each well, centrifuge at 2200 rpm for 30 seconds, shake at 250 rpm for 90 seconds, and react at room temperature for 30 minutes.
5、读取384孔板发光值,计算化合物抑制率。药物浓度为5μM时,化合物1-3对DNMT3A的抑制率如表2所示:5. Read the luminescence value of the 384-well plate and calculate the compound inhibition rate. When the drug concentration is 5 μM, the inhibition rate of compound 1-3 on DNMT3A is shown in Table 2:
表2
Table 2
(二)利用Cell Counting Kit-8(HY-K0301)试剂盒测定化合物对肿瘤细胞系A549的生长抑制情况。(ii) The Cell Counting Kit-8 (HY-K0301) was used to determine the growth inhibition of the compounds on the tumor cell line A549.
肿瘤细胞系A549来自中国细胞库(ATCC)。Tumor cell line A549 was obtained from ATCC.
(1)标准曲线绘制(1) Drawing of standard curve
1、在96孔板中接种2倍梯度稀释的细胞悬液(100μL/孔,最高浓度30,00细胞/孔),在培养箱中静置4小时待细胞贴壁。1. Inoculate a 96-well plate with a 2-fold gradient dilution of the cell suspension (100 μL/well, the highest concentration is 30,000 cells/well) and place it in an incubator for 4 hours to allow the cells to adhere.
2、吸去孔中上清液,每孔加入110μL的CCK-8试剂与培养基混合液(每100μL培养基与10μL的CCK溶液混合)。2. Aspirate the supernatant from the wells and add 110 μL of a mixture of CCK-8 reagent and culture medium to each well (mix 10 μL of CCK solution with every 100 μL of culture medium).
3、在培养箱中孵育2小时后,用酶标仪测定450nm处的吸光度,绘制标准曲线。3. After incubation in the incubator for 2 hours, measure the absorbance at 450 nm using an enzyme reader and draw a standard curve.
(2)生长抑制情况测定(2) Growth inhibition measurement
1、在96孔板中接种细胞悬液(100μL/孔,共3000个细胞),在培养箱中培养24小时。1. Inoculate the cell suspension in a 96-well plate (100 μL/well, 3000 cells in total) and culture in an incubator for 24 hours.
2、吸去孔中上清液,加入混合有化合物的培养基(100μL/孔),在培养箱中继续培养24、48、72小时。2. Remove the supernatant from the wells, add culture medium mixed with the compound (100 μL/well), and continue culturing in the incubator for 24, 48, and 72 hours.
3、吸去孔中上清液,每孔加入110μL的CCK-8试剂与培养基混合液(每100μL培养基与10μL的CCK溶液混合)。3. Aspirate the supernatant from the wells and add 110 μL of a mixture of CCK-8 reagent and culture medium to each well (mix 10 μL of CCK solution with every 100 μL of culture medium).
4、在培养箱中孵育2小时后,用酶标仪测定450nm处的吸光度。基于标准曲线,计算化合物对细胞的生长抑制情况。4. After incubation in the incubator for 2 hours, measure the absorbance at 450 nm using an ELISA reader. Calculate the inhibitory effect of the compound on cell growth based on the standard curve.
(3)抑制率测定(3) Inhibition rate determination
1、在96孔板中接种细胞悬液(100μL/孔,共3000个细胞),在培养箱中静置4小时待细胞贴壁。1. Inoculate the cell suspension in a 96-well plate (100 μL/well, 3000 cells in total) and place it in an incubator for 4 hours to allow the cells to adhere.
2、吸取孔中上清液,加入混合有化合物(化合物梯度浓度为11.85-202.5μM)的培养基(100μL/孔),在培养箱中继续培养24小时。2. The supernatant in the wells was aspirated, and culture medium (100 μL/well) mixed with compounds (compound gradient concentration was 11.85-202.5 μM) was added, and the cells were cultured in an incubator for 24 hours.
3、吸去孔中上清液,每孔加入110μL的CCK-8试剂与培养基混合液(每100μL培养基与10μL的CCK溶液混合)。3. Aspirate the supernatant from the wells and add 110 μL of a mixture of CCK-8 reagent and culture medium to each well (mix 10 μL of CCK solution with every 100 μL of culture medium).
4、在培养箱中孵育2小时后,用酶标仪测定450nm处的吸光度,计算化合物对细胞的抑制率,如表3所示。4. After incubation in the incubator for 2 hours, the absorbance at 450 nm was measured using an enzyme-labeled instrument to calculate the inhibition rate of the compound on the cells, as shown in Table 3.
表3
Table 3
由上表数据可以看出本申请的化合物均对细胞具有良好的安全性。It can be seen from the data in the above table that the compounds of the present application have good safety to cells.
(三)化合物对AML相关细胞系的生长抑制情况(III) Growth inhibition of compounds on AML-related cell lines
利用Cell Counting Kit-8(HY-K0301)试剂盒测定化合物对细胞系的生长抑制情况The Cell Counting Kit-8 (HY-K0301) was used to measure the growth inhibition of the compounds on the cell lines.
1、Thp-1、MOLM-13、A549细胞浓度标准曲线绘制1. Drawing of standard curves of Thp-1, MOLM-13 and A549 cell concentrations
先准备好倍比稀释梯度浓度的细胞悬液,总共6个浓度梯度,每个浓度3个复孔,其中Thp-1和 MOLM-13起始浓度分别为5*10^4细胞/孔和6*10^4细胞/孔。将梯度稀释的细胞以100μL/孔接种在96孔板中,放入培养箱中培养72h。每孔直接添加10μL CCK溶液。在培养箱中继续孵育30分钟、1h、2h、3h、4h后分别用酶标仪测定450nm处的吸光度(以下简称为OD450值),绘制标准曲线。后续实验中两种细胞系根据标曲取每孔接种量确定为10,000个细胞和5,000个细胞,CCK-8孵育时间1h。First, prepare the cell suspension with a dilution gradient, a total of 6 concentration gradients, 3 replicates for each concentration, including Thp-1 and The starting concentrations of MOLM-13 were 5*10^4 cells/well and 6*10^4 cells/well, respectively. The gradient diluted cells were inoculated in a 96-well plate at 100μL/well and placed in an incubator for 72h. 10μL CCK solution was added directly to each well. After continuing to incubate in the incubator for 30 minutes, 1h, 2h, 3h, and 4h, the absorbance at 450nm (hereinafter referred to as OD450 value) was measured with an enzyme reader, and a standard curve was drawn. In subsequent experiments, the inoculation amount of each well of the two cell lines was determined to be 10,000 cells and 5,000 cells according to the standard curve, and the CCK-8 incubation time was 1h.
3、Thp-1、MOLM-13增殖抑制率测定:与A549细胞系略有不同,由于悬浮细胞不便换液,我们选择了无细胞的梯度浓度化合物组(记为纯化合物对照组)作为药物背景对照。3. Determination of Thp-1 and MOLM-13 proliferation inhibition rate: Slightly different from the A549 cell line, since it is inconvenient to change the medium of suspended cells, we selected a cell-free gradient concentration compound group (denoted as the pure compound control group) as the drug background control.
实验组为50μL细胞+50μL稀释有梯度浓度化合物(24nM到50μM倍比稀释)的培养基,在培养箱中继续培养72小时后直接添加10μL CCK溶液,在培养箱中孵育1小时后,用酶标仪测定OD450值和参比波长OD620值。首先用OD450值扣除OD620值后进行计算,记为OD’450值。增殖率=(实验组OD’450值-纯化合物对照组OD’450值)/(无化合物对照组OD’450值-空白OD’450值)。(5)增殖抑制率测定:每个浓度下化合物的增殖率=该浓度下化合物处理过细胞的增殖率/同样浓度下DMSO处理过细胞的增殖率。结果如表4和图1所示。The experimental group consisted of 50 μL cells + 50 μL culture medium diluted with gradient concentration compounds (24 nM to 50 μM dilutions). After continuing to culture in the incubator for 72 hours, 10 μL CCK solution was directly added. After incubation in the incubator for 1 hour, the OD450 value and the reference wavelength OD620 value were measured using an enzyme marker. First, the OD450 value was deducted from the OD620 value and the value was recorded as the OD’450 value. Proliferation rate = (OD’450 value of the experimental group - OD’450 value of the pure compound control group) / (OD’450 value of the no compound control group - blank OD’450 value). (5) Determination of proliferation inhibition rate: The proliferation rate of the compound at each concentration = the proliferation rate of the compound-treated cells at that concentration / the proliferation rate of the DMSO-treated cells at the same concentration. The results are shown in Table 4 and Figure 1.
表4
Table 4
以上化合物在AML相关细胞系(THP-1、MOLM-13)中的IC50值比在非靶细胞(A549)中低1.7-25倍,表明它们具有较好的抑制AML细胞增殖的效果。其中,化合物14在Thp-1中的IC50仅为0.5784μM,抑制细胞增殖的效果更明显。The IC50 values of the above compounds in AML-related cell lines (THP-1, MOLM-13) are 1.7-25 times lower than those in non-target cells (A549), indicating that they have a good effect in inhibiting the proliferation of AML cells. Among them, the IC50 of compound 14 in Thp-1 is only 0.5784 μM, and the effect of inhibiting cell proliferation is more obvious.
4、J1-890Dnmt3a-/-和J1-890细胞浓度标准曲线绘制4. Drawing of standard curve of J1-890Dnmt3a-/- and J1-890 cell concentration
步骤基本等同A549细胞系,但细胞起始浓度为4.8*10^4细胞/孔,接种至包被了matrigel的孔板中,培养72h后将培养基更换为105μL的CCK-8稀释液(95μL培养基+10μL CCK溶液)。后续实验根据标曲取每孔接种量确定为3,000个细胞,CCK-8孵育时间1h。数据处理同A549细胞系。 The steps are basically the same as the A549 cell line, but the starting cell concentration is 4.8*10^4 cells/well, inoculated into a matrigel-coated plate, and the culture medium is replaced with 105μL of CCK-8 diluent (95μL culture medium + 10μL CCK solution) after 72h of culture. The subsequent experiments are based on the standard curve to determine the inoculation amount per well as 3,000 cells, and the CCK-8 incubation time is 1h. Data processing is the same as the A549 cell line.
(四)化合物的脱靶效应测试(IV) Off-target effect testing of compounds
为了确定化合物9、12、13、14四个化合物抑制细胞增殖的机制是否有脱靶效应,我们对比了Dnmt3a2敲除的小鼠胚胎干细胞系J1-890Dnmt3a-/-与野生型J1-890细胞系给药后的增殖情况。In order to determine whether the mechanism by which compounds 9, 12, 13, and 14 inhibit cell proliferation has off-target effects, we compared the proliferation of the Dnmt3a2 knockout mouse embryonic stem cell line J1-890Dnmt3a-/- and wild-type J1-890 cell lines after administration.
J1-890Dnmt3a-/-和J1-890细胞系增殖抑制率测定:基本步骤同A549操作,但每孔接种量为3,000个细胞,过夜培养(约12h)后再将培养基更换为稀释有梯度浓度化合物的培养基。数据处理同A549细胞系。结果如表5所示。J1-890Dnmt3a-/- and J1-890 cell lines proliferation inhibition rate determination: The basic steps are the same as A549 operation, but the inoculation amount per well is 3,000 cells, and the medium is replaced with a medium diluted with gradient concentration compounds after overnight culture (about 12 hours). Data processing is the same as A549 cell line. The results are shown in Table 5.
表5
Table 5
与野生型J1-890细胞系相比,DNMT3A蛋白在J1-890Dnmt3a-/-中几乎不表达,如图2和图3所示;而Dnmt3a2敲除不影响这四种药物的IC50。Compared with the wild-type J1-890 cell line, DNMT3A protein was hardly expressed in J1-890Dnmt3a-/-, as shown in Figures 2 and 3; and Dnmt3a2 knockout did not affect the IC50 of these four drugs.
综上,这些化合物通过靶向DNMT3A蛋白起作用,均未产生脱靶现象。 In summary, these compounds work by targeting DNMT3A protein and do not cause off-target effects.
Claims (15)
Use of a compound as shown in formula I or a pharmaceutically acceptable salt thereof in the preparation of a DNA methyltransferase 3A inhibitor,
The use of a compound as shown in formula I or a pharmaceutically acceptable salt thereof in the preparation of a DNA methyltransferase 3A inhibitor according to claim 1, characterized in that the compound as shown in formula I is any of the following compounds:
A compound as shown in formula I' or a pharmaceutically acceptable salt thereof,
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