WO2024254281A2 - Compositions de protéines conjuguées et non conjuguées - Google Patents
Compositions de protéines conjuguées et non conjuguées Download PDFInfo
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- WO2024254281A2 WO2024254281A2 PCT/US2024/032770 US2024032770W WO2024254281A2 WO 2024254281 A2 WO2024254281 A2 WO 2024254281A2 US 2024032770 W US2024032770 W US 2024032770W WO 2024254281 A2 WO2024254281 A2 WO 2024254281A2
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K47/00—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient
- A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
- A61K47/6801—Drug-antibody or immunoglobulin conjugates defined by the pharmacologically or therapeutically active agent
- A61K47/6803—Drugs conjugated to an antibody or immunoglobulin, e.g. cisplatin-antibody conjugates
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K47/00—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient
- A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
- A61K47/6835—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site
- A61K47/6849—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a receptor, a cell surface antigen or a cell surface determinant
Definitions
- the present invention relates to a composition comprising a mixture of unconjugated and conjugated proteins (e.g., antibodies and conjugates thereof) and methods of using and manufacturing said composition.
- BACKGROUND [0004] Diabetic retinopathy is a leading cause of blindness in people between the ages of about 20 to 64 years of age. Engelgau M, Geiss L, Saaddine J, Boyle J, et al. 2004. The Evolving Diabetes Burden in the United States. Ann of Int Med. 140 (11): 945-951. In the United States, diabetic retinopathy accounts for some 12% of new cases of blindness.
- diabetic retinopathy typically, in cases of diabetic retinopathy, retinal blood vessels will swell and leak fluid into the rear of the eye. Hyperglycemia induces intramural and thickening of the basement membrane, resulting in leaky or permeable blood vessels.
- changes in blood glucose level cause changes to retinal blood vessels. All people with diabetes mellitus are at risk. The longer a person has diabetes, the higher their risk of developing some ocular problem. Between 40 to 45 percent of Americans diagnosed with diabetes have some stage of diabetic retinopathy. Causes and Risk Factors. Diabetic Retinopathy.
- Diabetic retinopathy is first exhibited in the development of microaneurysms in the retina. Microaneurysms occur when there is a swelling of capillaries (very small blood vessels) that feed the retina. The presence of relatively small numbers of microaneurysms will not usually cause problems with vision. However, if the retinopathy develops to later stages, there are significant chances of vision loss. Such early-stage retinopathy are referred to as background diabetic retinopathy or non-proliferative diabetic retinopathy (NPDR). While NPDR patients are generally asymptomatic, early detection of retinopathy is crucial because if the disease proceeds to later stages, significant vision loss is very likely.
- NPDR non-proliferative diabetic retinopathy
- neovascularization occurs in the back of the eye (proliferative diabetic retinopathy).
- the neovasculature is leaky and the vessels can burst, followed by bleeding and resulting in blurred or obscured vision. Due to lack of oxygen in the eye, still further neovascularization occurs.
- Blood vessels grow along the retina and in the vitreous humor. As these vessels burst, there is further bleeding and the retina can be badly damaged or destroyed.
- the accumulation of fluid in the macula due to leaking blood vessels is called diabetic macular edema. Many patients with diabetic retinopathy will develop diabetic macular edema.
- VEGF-directed therapies are effective not just for diabetic retinopathy, but also for retinal vascular diseases such as Age-Related Macular Degeneration (AMD), neovascular (wet) AMD and Retinal Vein Occlusion (RVO).
- AMD Age-Related Macular Degeneration
- RVO Retinal Vein Occlusion
- proteins should be formulated in clear solutions. Such formulations can have a defined buffer system and some excipients added for further enhancement of protein stability. Proteins can be conjugated to other moieties to bring an enhanced property or set of properties to the protein. For example, the conjugation of the protein to a potent toxin to create an antibody drug conjugate that targets the toxin to particular receptor-containing cell type for enhanced potency or enhanced safety.
- the present disclosure is not limited to diabetic retinopathy, and can be applied to various indications as will be appreciated by those in the art.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine- containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- compositions comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a therapeutically acceptable carrier, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has a reduced viscosity and/or an enhanced injectability compared to a reference formulation comprising the conjugate at the total molar amount.
- pI isoelectric point
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced viscosity and/or an enhanced injectability compared to a reference composition comprising the conjugate, wherein the first protein of the conjugate is present in the reference composition at the total mass weight concentration of the first and second proteins in the composition.
- pI isoelectric point
- a low-viscosity formulation of a protein conjugate comprising: a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the formulation has reduced viscosity and/or an enhanced injectability compared to a reference formulation comprising the conjugate at a total molar amount that is the sum of the first and second molar amounts.
- pI isoelectric point
- a low-viscosity therapeutically acceptable composition of a protein conjugate comprising a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine- containing polymer; a second molar amount of the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the composition has reduced viscosity and/or an enhanced injectability compared to a reference composition comprising the conjugate at a total molar amount that is the sum of the first and second molar amounts.
- pI isoelectric point
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine- containing polymer; and a pharmaceutically acceptable carrier, wherein the second protein is present in the formulation at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has a reduced turbidity compared to a reference formulation comprising the first molar amount (e.g., the same first molar amount) of the conjugate and the second molar amount (e.g., the same second molar amount) of the second protein at a pH within 0.5
- the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine- containing polymer; and a pharmaceutically acceptable carrier, wherein the second protein is present in the formulation at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has a reduced turbidity compared to a reference formulation comprising the same first molar amount of the conjugate and the same second molar amount of the second protein at a pH about the same as (e.g., within 0.05, 0.1, 0.15, 0.2, 0.2, 0.3, 0.4, or
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced turbidity compared to a reference composition comprising the second protein at the percent composition (e.g., the same percent composition), with the remainder comprising the first protein, at a pH within 0.5 pH units of the pI of the second protein.
- a pharmaceutically acceptable carrier wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein
- the therapeutically acceptable composition comprises: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced turbidity compared to a reference composition comprising the second protein at the same percent composition, with the remainder comprising the first protein, at a pH about the same as (e.g., within 0.05, 0.1, 0.15, 0.2, 0.3, 0.4, or 0.5 pH units of) the pI of the second protein.
- a pharmaceutical formulation comprising: a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine-containing polymer; a second molar amount the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the protein that is not conjugated to the phosphorylcholine-containing polymer at about 1% or more of a total molar amount of the conjugate and unconjugated proteins, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the formulation is substantially free of turbidity.
- pI isoelectric point
- a formulation comprising: a phosphorylcholine-containing polymer present in the formulation at 100 mg/mL or higher; and a protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the protein is present in the formulation at a second molar amount, wherein the protein is present in the formulation at about 1% or more of a total molar amount of the polymer and the protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein.
- pI isoelectric point
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine- containing polymer; and a pharmaceutically acceptable carrier, wherein the difference between the pI of the second protein and the pH of the formulation in the acidic or basic direction is selected to be greater than the minimum difference in the corresponding acidic or basic direction between the pI of the second protein and the pH for a reference formulation comprising: a third molar amount of the conjugate comprising the first protein conjugated to the phosphorylcholine-containing polymer; a fourth molar amount of the second protein that is not conjugated to the phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein a first total molar amount comprising a sum of the first molar amount and the second molar amount, and a second total molar amount
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the difference between the pI of the second protein and the pH of the formulation is selected to be greater than the minimum difference between the pI of the second protein and the pH for a reference formulation comprising: the conjugate comprising the first protein conjugated to the phosphorylcholine-containing polymer; the second protein that is not conjugated to the phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein the percent composition of the second protein in the composition is higher than the percent composition of the second protein in the reference composition, wherein the reference composition is substantially free of turbidity.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the first protein and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein.
- composition comprising: a first molar amount of a conjugate comprising a first protein conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the first protein and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a formulation comprising: a first molar amount of a first protein that is conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, the further improvement comprising: the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a first protein that is conjugated to a polymer; and a second protein that is not conjugated to a polymer, the further improvement comprising: the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein.
- a formulation comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein a first molar amount of the conjugate and a second molar amount of the second protein has been combined in the formulation such that the second molar amount is about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein a first molar amount of the conjugate and a second molar amount of the second protein has been combined in the composition such that the second molar amount is about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein the second protein at a percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the composition of about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, etc.) has been combined with the conjugate, wherein the remainder of the total protein mass weight concentration comprises the first protein.
- a formulation comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer, wherein the polymer has 9 arms and a molecular weight of between 600,000 and 1,000,000 Da, wherein the polymer is present in the formulation at about 100 mg/mL or more; and a second protein that is not conjugated to a polymer, wherein the second protein is present in the formulation at 5-15 mg/mL.
- an intraocular therapeutic composition comprising an anti-VEGF-A antibody at about 50 mg/mL of protein, the anti-VEGF-A antibody comprising: a heavy chain comprising a complementarity determining region 1 (CDR H 1): GYDFTHYGMN (SEQ ID NO: 9), CDR H 2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDR H 3: YPYYYGTSHWYFDV (SEQ ID NO: 11); and a light chain comprising CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDRL2: FTSSLHS (SEQ ID NO: 13), and CDRL3: QQYSTVPWT (SEQ ID NO: 14), wherein the anti-VEGF-A antibody is present in the composition as either an antibody conjugate or unconjugated antibody, wherein the unconjugated antibody is present in the formulation at between about 10% to about 30% of a total molar amount of the antibody conjugate and the unconjugate
- an intraocular therapeutic composition comprising an anti- VEGF-A antibody at about 50 mg/mL of protein, the anti-VEGF-A antibody comprising: a heavy chain comprising an amino acid sequence of SEQ ID NO: 1 (with or without the C- terminal lysine); and a light chain comprising an amino acid sequence of SEQ ID NO: 2, wherein the anti-VEGF-A antibody is present in the composition as either an antibody conjugate or unconjugated antibody, wherein the unconjugated antibody is present in the formulation at between about 10% to about 30% of a total molar amount of the antibody conjugate and the unconjugated antibody, wherein the total molar amount is the sum of the molar amount of the antibody conjugate and the molar amount of the unconjugated antibody, wherein the antibody conjugate comprises the following structure: wherein: each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is bonded
- an intraocular therapeutic composition comprising a fusion construct at about 53 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising an amino acid sequence of SEQ ID NO:105 (with or without the C-terminal lysine); and a light chain comprising an amino acid sequence of SEQ ID NO:106, wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to about 40% of a total molar amount of the conjugate and the unconjugated fusion construct, wherein the total molar amount is the sum of the molar amount of the conjugate and the molar amount of the unconjugated fusion construct, wherein the conjugate comprises the fusion construct conjugated to a phosphorylcholine-containing polymer, wherein the phosphorylcholine
- an intraocular therapeutic composition comprising a fusion construct at about 50 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDRH1): PFAMH (SEQ ID NO: 134), CDRH2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDRH3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDRL1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDR L 3: QQWSGYPYT (SEQ ID NO: 139), wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to
- the sum of n1, n2, n3, n4, n5, n6, n7, n8 and n9 is about 1500 to about 3500 plus or minus about 10% to about 20%.
- an intraocular therapeutic composition comprising a fusion construct at about 50 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDRH1): PFAMH (SEQ ID NO: 134), CDRH2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDRH3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDRL1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDRL3: QQWSGYPYT (SEQ ID NO: 139), wherein
- each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is bonded to the heavy chain of the conjugate through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains;
- PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any halogen, including –Br, –Cl, or –I, d) –SCN, or e) –NCS; and n1, n2, n3, n4, n5, n6, n7, n8 and n9 are the same or different such that the sum of n1, n2, n3, n4, n5, n6, n7, n8 and
- a method of preparing a formulation comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- Also provided is a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer
- a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- Also provided is a method of preparing a formulation comprising adjusting the pH of a formulation to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the formulation, wherein the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the unconjugated protein, wherein the unconjugated protein is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the unconjugated protein at about 1% or more of a total molar amount of the conjugate and the unconjugated protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the un
- a method of preparing a therapeutically acceptable composition comprising adjusting the pH of a composition to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the composition, wherein the composition comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the unconjugated protein, wherein the unconjugated protein is not conjugated to a phosphorylcholine-containing polymer, wherein the composition comprises the unconjugated protein at about 0.1% or more of a total molar amount of the conjugate and the unconjugated protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- Also provided is a method of preparing a therapeutically acceptable composition comprising adjusting the pH of a therapeutically acceptable composition to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the composition, wherein the composition comprises: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein.
- pI isoelectric point
- a method of preparing a low-viscosity formulation of a protein conjugated to a phosphorylcholine-containing polymer comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the protein that is not conjugated to the phosphorylcholine-containing polymer at about 1% or more of a total molar amount of the conjugate unconjugated proteins, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has reduced viscosity and/or an enhanced injectability compared to a reference formulation comprising the conjugate at the total
- Also provided is a method of preparing a formulation comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; and a second protein that is not conjugated to a phosphorylcholine- containing polymer, wherein the percent composition of the second protein is about 1% or more, with the remainder comprising the first protein.
- a formulation or composition made by any one of the methods described herein.
- a method of treating a subject comprising: intraocularly administering a therapeutically effective amount of any one of the formulation or composition described herein to a subject in need thereof.
- a method of treating a subject comprising: intraocularly administering a therapeutically effective amount of a low-viscosity formulation to a subject in need thereof, wherein the formulation comprises: a first concentration of a conjugate comprising a first anti-VEGF antibody conjugated to a phosphorylcholine-containing polymer; a second concentration of an anti-VEGF agent that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the anti-VEGF agent.
- pI isoelectric point
- kits comprising: a pre-filled syringe comprising a low- viscosity formulation comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a syringe needle for injection of the low-viscosity formulation, wherein the gauge of the needle is 27 or higher.
- a formulation comprising about 40 to about 60 mM sodium acetate, about 0.01% to about 0.04% polysorbate 20, about 40 to about 60 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 15% to about 25% OG1950 and about 75% to about 85% OG1953 by molar amount, at pH about 4.5 to about 5.5.
- a formulation comprising, consisting of, or consisting essentially of, about 50 mM sodium acetate, about 0.025% polysorbate 20, about 50 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 20% OG1950 and about 80% OG1953 by molar amount, at about pH 5.
- a method of storing a protein comprising maintaining a protein in a formulation for at least 2 months and up to 2 years, the formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the protein comprises an antibody or a fusion construct.
- the formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer;
- FIG. 1 shows Compound L.
- FIG. 2 shows Compound K.
- FIG. 3 shows the synthesis of OG1802 from R3707.
- FIG. 4 shows OG1786.
- FIG. 5 shows the synthesis of OG1546 from OG1550.
- FIG. 6 shows the synthesis of OG1784 from OG1546 and OG1563.
- FIG. 7 shows the synthesis of OG1405 from OG1784.
- FIG. 8 shows the synthesis of OG 1785 from OG1405.
- FIG. 9 shows the synthesis of OG1786 from OG1785. [0039] FIG.
- FIG. 10 shows OG1802.
- FIG. 11 shows Compound E.
- FIG. 12 depicts some embodiments of anti-VEGF-A heavy chain with certain effector function mutations and L443C (EU numbering, which is position 449 in SEQ ID NO.1).
- FIG. 13 depicts some embodiments of an anti-VEGF-A light chain (SEQ ID NO.2).
- FIG.14 depicts some embodiments of a bevacizumab heavy chain (SEQ ID NO.3).
- FIG. 15 depicts some embodiments of a bevacizumab light chain (SEQ ID NO.4).
- FIG.16 depicts some embodiments of a ranibizumab heavy chain (SEQ ID NO.5).
- FIG. 17 depicts some embodiments of a ranibizumab light chain (SEQ ID NO.6).
- FIG. 18 depicts some embodiments of a method for preparing an antibody conjugate.
- FIG. 19 depicts Ion Exchanger analysis (A280 absorbance) of reactions A through G.
- FIG. 20 depicts the effect of various anti-VEGF molecules on binding of biotin-VEGF to plate bound VEGFR ECD-Fc protein, and their IC50 values.
- FIG. 21 depicts the OG1950 binding affinity to VEGF measured by BIAcore single cycle kinetics.
- FIG.22 depicts binding of the OG1950 to Fc gamma receptor I.
- FIG. 23 depicts binding of the OG1950 to Fc gamma receptor IIIa.
- FIG.24 depicts binding of QG 1950 to human complement protein C1q.
- FIG.25 depicts the results of a proliferation assay (including IC50 values).
- FIG.26 depicts the results of single cycle kinetics of VEGF binding to anti- VEGF agents.
- FIG. 27 depicts some embodiments of nucleic acid sequences encoding heavy and light chain variable regions.
- FIG.28 is a collection of images and a table depicting results of mixing the free antibody with either polymer or OG1953 composition.
- FIG.29 is a collection of images showing visual appearance of 30 different formulation conditions in two design of experiment (DOE) screenings.
- FIG. 30 is a graph depicting turbidity measurements of formulations antibody with OG1801 polymer (samples #1-#30) in the presence of different excipients.
- FIG.31 is a plot produced using JMP SAS software depicting the turbidity changes over time for one embodiment of a DOE experiment with the OG1950 antibody mixed with OG1801 polymer in the presence of different excipients.
- FIG. 32 is an image and a table showing the effect of Histidine and pH on turbidity of the formulation.
- FIG. 30 is a graph depicting turbidity measurements of formulations antibody with OG1801 polymer (samples #1-#30) in the presence of different excipients.
- FIG.31 is a plot produced using JMP SAS software depicting the turbidity changes over time for one embodiment of a DOE experiment with the OG1950 antibody mixed with
- FIG. 33 is an image showing some embodiments of formulations at differing pHs and corresponding turbidity results.
- FIG.34 is a graph showing some embodiments of formulations at differing pHs and corresponding turbidity results.
- FIG.35A is a collection of images showing the appearances of four different preparations at 50mg/ml of conjugated antibody supplemented with unconjugated antibody at different pH setpoints. From left to right: A, preparation at pH 6.5 results in a cloudy mixture; B-D, preparations at 5.0 - 5.2 result in a clear solution irrespective of the formulation buffer and percent unconjugated antibody. The mixtures are first prepared by concentrating the purified conjugated antibody to approx.
- FIG. 35B and 35C are a collection of chromatograms and tables showing cation exchanger chromatography (CEX) analysis and analytical size exclusion chromatography (SEC) analysis of several embodiments of formulations of OG1950/OG1953.
- FIG.36 is a table showing the turbidity result for an embodiment of mixing the OG2072 fusion protein with its conjugated form OG2074.
- FIGS.37A and 37B are a collection of a table, images, and a graph showing the screening result of mixing various proteins other than OG1950 antibody with a fixed concentration of OG1801 polymer. This is a control in order to evaluate if the turbidity is a more general phenomenon related to the presence of polymer.
- FIGs.38A and 38B are a collection of images and a plot showing the effect of pH adjustment on the turbidity of formulations. The result demonstrated that the turbidity is reversible or reproducible dependent on the pI of the protein.
- FIG.39 is a table showing the sample setup for formulations with different percentages of free protein relative to conjugated protein.
- FIG.40A is a collection of images showing the appearance of formulations having different percentages of free protein relative to conjugated protein.
- FIG. 40B is a collection of traces showing analysis of different partitions during the tandem method analysis of a formulation.
- FIG. 40C is a collection of plots showing analysis of different partitions during the tandem method analysis of a formulation.
- FIG.40D is a table showing peak area comparison of CEX bound (free protein) to unbound fraction (conjugate).
- FIG.40E is a collection of traces showing analysis of different partitions during the tandem method analysis of a formulation.
- FIG. 40F is a collection of plots showing analysis of different partitions during the tandem method analysis of a formulation.
- FIG. 40G is a table showing peak area comparison of CEX bound (free protein) to unbound fraction (conjugate).
- FIG. 41 is a table showing the sample setup for a long-term stability plan for various formulations of OG1953 conjugate containing free proteins from 7.5-20% with a total combined protein concentrations of 50-65mg/ml.
- FIGs. 42 and 43 are a collection of tables and plots showing the results of ELISA assays measuring the potency of various formulations of OG1953 conjugate containing free proteins from 7.5-20% with a total combined protein concentrations of 50-65mg/ml after storage.
- FIG.44 is a collection of a table and a graph showing protein concentration of formulations measured by SoloVPE OD280nm method.
- FIG. 45 is a data table showing a summary of the results of the stability testing of formulations.
- Figs. 46A is a collection of SEC-HPLC traces of formulation #4 (20% OG1950, 80% OG1953, 50 mM Na-acetate, 0.025% Tween 20, pH 5.0) after 6 months at the temperatures highlighted.
- FIG. 46B provides a table and graphs showing size exclusion chromatography analysis of formulations for the aggregation and degradation level of the OG1953 conjugate.
- FIG. 47A shows a schematic diagram showing an overview of the Tandem HPLC method, which combines the CEX-HPLC in tandem with a SEC-HPLC column.
- FIG. 47B is a collection of traces, a table, and graphs showing tandem method analysis of the OG1950 free protein and its aggregated forms (P1 and P2).
- FIGs. 47C and 47D are a collection of traces and a table showing tandem method analysis of formulations.
- Figs. 48A-48C are a collection of a table, image and graph showing the design matrix and visual result of the formulations.
- Figs.49A and 49B are a collection of plots showing analysis of the turbidity results against the concentration of polymer, free protein and pH.
- Figs. 49C and 49D are a collection of plots and schematic representations showing turbidity of formulations at various pH for the different levels of OG1801 polymer and free protein.
- Fig. 49E is a plot showing turbidity measurements results against the concentration of polymer, free protein and pH.
- Figs.49F-49I are a collection of plots showing an overlay of the pH boundary curve plot with other OG1801 polymer with free protein only experimental data.
- Figs.49J-49M are a collection of plots showing an overlay of the pH boundary curve plot with other OG1953 conjugate solution and free protein only experimental data.
- Fig. 49N is a plot showing analysis of turbidity measurements in OG1801 polymer solution with free protein against the concentration of polymer, free protein and pH.
- Fig. 49O is a plot showing analysis of turbidity measurements in OG1953 conjugate solution with free protein against the concentration of polymer, free protein and pH.
- Fig. 50A is a collection of graphs and schematic diagram showing formulation viscosity at 25oC.
- Figs.50B and 50C are a collection of graphs and a table showing impact of increasing free protein percent composition on viscosity of formulations at 25oC.
- Fig. 50D is a collection of plots and tables showing the viscosity of formulations with various concentrations of OG1801 polymer.
- Fig. 51 is a collection of images showing air movement in syringes filled with different formulations.
- Figs. 52A-52C are a collection of plots and tables showing potency comparison of various OG1953 formulations using ELISA or cell-based assay.
- Figs. 50B and 50C are a collection of graphs and a table showing impact of increasing free protein percent composition on viscosity of formulations at 25oC.
- Fig. 50D is a collection of plots and tables showing the viscosity of formulations with various concentrations of OG1801 polymer.
- Fig. 51 is a collection of images showing air movement in syringes filled with different
- FIG. 53A-53D are a collection of graphs, charts, and tables showing improved vision in wet AMD patients administered with OG1953, aflibercept, or other anti- VEGF agents.
- FIG. 54 is a collection of sequences showing some non-limiting embodiments of a light chain and heavy chain of a fusion construct.
- FIG.55A and 55B are a collection of sequences showing some non-limiting embodiments of a heavy chain and light chain, respectively, of a fusion construct.
- FIGs. 56A-56C are a collection of plots showing the level of impurities (e.g., aggregation and/or degradation level) in OG1953 conjugate formulations over time. [0100] FIGs.
- FIGS. 59A-59D depict continuous 80min tandem method separation with PhotoDiol Array (PDA) detection set at 200-350nm.
- FIG. 59A depicts the 2D contour view of elution time versus wavelength;
- FIG.59B depicts the extracted wavelength profile at 280nm and the peak identification of the various eluted fractions collected for further characterization using SDS-PAGE analysis followed by Silver Staining, and results were shown in FIG.
- PDA PhotoDiol Array
- FIGS.60A-60C depict KSI-301 stability data up to 9 months under different temperature conditions; -20 ⁇ 5°C (FIG.60A), 5 ⁇ 3°C (FIG.60B), and 25 ⁇ 2°C/ 60 ⁇ 5% RH (relative humidity) (FIG.60C).
- FIG.61 depicts KSI-501DS Batches 1-3 Lot Release Data.
- FIG. 62 depicts an injection force comparison of (Panel A) OG1953 (100%) conjugate versus the KSI-301 mix formulation using a 27G or 29G dosing needle; (Panel B) OG2074 (100%) conjugate versus the KSI-501_batch 2 mix formulation using a 27G or 29G dosing needle.
- FIG.63 depicts a viscosity comparison at ambient temperature of (Panel A) OG1953 (100%) conjugate versus the KSI-301 mix formulation; (Panel B) OG2074 (100%) conjugate versus various batches of the KSI-501 mix formulation.
- formulations and compositions comprising a mixture of an unconjugated protein (e.g., an unconjugated anti-VEGF-A antibody) and conjugates thereof.
- the conjugates can include a protein (which may or may not be the same as the unconjugated protein) conjugated to a phosphorylcholine-containing polymer.
- the pH of the formulation can be different from the isoelectric point (pI) of the unconjugated protein in the formulation such that the formulation is not or is less turbid.
- the formulation has reduced viscosity compared to a reference formulation of the conjugated protein (without the unconjugated protein).
- the reduced viscosity can improve injectability of the formulation (e.g. by a syringe) and/or handling of the formulation during manufacture.
- the composition can be used for the treatment of certain conditions, such as eye disorders, including retinal vascular disorders.
- the formulations, compositions, and methods of the present disclosure can be provided for treating any disease or disorder as described herein, and is not necessarily limited to diabetic retinopathy or diabetic macular edema.
- a drug composition (a formulation) which is a mixture of a protein and a conjugate of that protein and which is a stable solution.
- lowering the end concentration of biopolymer while keeping the amount of the antibody bioactive the same can result in (i) a decrease in solution viscosity which has many advantages for pharmaceutical manufacturing of drug substance and drug product, and (ii) better handling of the drug for dose preparation and handling in the physician office, and (iii) easier injectability into the patient for example in retina, where a needle is inserted into the vitreous of the eye and the syringe plunger is pushed with a maximum force of the hand, including shorter injection time, reduced force required to drive the plunger down to express out the drug, and a narrower needle such as 30G or 29G, a higher dose level with smaller volume.
- a mixture of unconjugated and conjugated protein can benefit from the direct activity of the protein and a modified activity of the protein as modified by conjugation to a polymer.
- an immediacy of effect of the unconjugated protein at a defined ratio for example, 20% of the administered antibody
- a modified durability of effect of the conjugated protein at a defined ratio for example, the remaining 80% of the antibody is in a conjugated form
- the formulation is a clear solution containing the free (unconjugated) antibody, the antibody conjugated to the phosphorylcholine polymer, the buffer system and at a particular pH, where the formulation is stable and suitable for drug development, manufacturing and/or storage.
- an anti-VEGF antibody (OG1950) conjugated to a phosphorylcholine containing biopolymer (OG1802) which conjugate is called OG1953 can be formulated at 50 mg/mL by weight of antibody and formulated in sodium phosphate pH 6.5 that is clear and stable, and adding a desired amount of the free unconjugated anti-VEGF antibody (OG1950) to create a solution of 40 mg/mL of conjugate (OG1953) and 10 mg/mL of OG1950 without adjusting the formulation system as provided herein can result in turbidity.
- formulations and methods provided herein can provide a clear solution of the unconjugated and conjugated antibody coformulation.
- a clear and stable ‘formulation system’ of a protein with a phosphorylcholine-biopolymer-conjugated version of that protein in which the protein can be soluble and clear and stable and avoids turbidity formation.
- a method to reduce the turbidity in some embodiments, can be applied to OG1953 to create OG195380% + OG195020% at a pH 5.0, thereby preventing turbidity that forms at a pH of 7.5, which is at or close to the pI of the protein.
- the solubility switch involves the application of pH to control this switch.
- this solubility switch is applied to OG2074 to create OG207470% + OG207230% at pH 5.0, for ophthalmology (intravitreal) injection or for systemic diseases.
- the concentration of the dose formulation, for OG1953 is for example 50 mg/mL (as measured by the antibody portion)
- the bioconjugate has durability due to the conjugated biopolymer, but to improve manufacturability the same amount of protein bioactive (5.0 mg in 100 microliter dose, i.e.50 mg/mL in the formulation by weight of antibody) is kept while increasing the relative amount of unconjugated protein.
- OG1953 is 80% and OG1950 is 20%; or OG1953 is 75% and OG1950 is 25%; or OG1953 is 70% and OG1950 is 30%; or OG1953 is 65% and OG1950 is 35%; or OG1953 is 60% and OG1950 is 40%; or OG1953 is 50% and OG1950 is 50%.
- the pH is at 5.0 (without the addition of histidine or sucrose or trehalose) by shifting the pH to 5.0 and adjusting the formulation buffering constituents to acetate from phosphate.
- a high dose formulation with improved manufacturability is achieved because of decreased viscosity for drug substance and drug product (vials, prefilled syringes); improved usability and dose administration (because of decreased viscosity); improved clinical immediacy (so improved balance of clinical immediacy of the for example 20% mAb while retaining clinical durability of the for example 80% mAb-conjugate).
- the composition can be tuned to achieve an optimal viscosity to enable large scale manufacturing (of drug substance, of drug product, of pre-filled syringes) and to enable safer dose handling and preparation (for example by physicians and patients) and to enable safer dose administration for example injectability requiring lower injection force by the doctor.
- the injection force is less than 10 Newtons, or less than 5 Newtons
- injection time is 10 seconds or less, or 5 seconds or less
- the injection needle has a bore size of between 30 gauge and 27 gauge, including 28 gauge or 29 gauge.
- the composition can be tuned to achieve an optimal balance of durability of clinical effect (a basal activity) and immediacy of clinical effect (a bolus activity).
- the therapeutics are formulated into a clear solution with long-term stability.
- a “neovascular disorder” is a disorder or disease state characterized by altered, dysregulated or unregulated angiogenesis.
- neovascular disorders include neoplastic transformation (e.g., cancer) and ocular neovascular disorders including diabetic retinopathy and age-related macular degeneration.
- An “ocular neovascular” disorder is a disorder characterized by altered, dysregulated or unregulated angiogenesis in the eye of a patient.
- Such disorders include optic disc neovascularization, iris neovascularization, retinal neovascularization, choroidal neovascularization, corneal neovascularization, vitreal neovascularization, glaucoma, pannus, pterygium, macular edema, diabetic retinopathy, diabetic macular edema, vascular retinopathy, retinal degeneration, uveitis, inflammatory diseases of the retina, and proliferative vitreoretinopathy.
- the term “percent composition” refers to the percent amount (in mass or concentration units) of a component present in a composition.
- Percent composition is calculated by determining the amount of a component in mass units (e.g., ⁇ g) or in concentration units (e.g., mg/mL), dividing that amount by the total amount of all components in the composition in the corresponding unit, and multiplying by 100.
- the amount of the unconjugated protein can be divided by the total amount of the protein component in the solution (excluding the contribution from the polymer component of the conjugate to the mass of the conjugate) to obtain a percent composition.
- % total molar amount denotes the proportion (in percent) of the amount (in moles or a molar concentration) of one component of a composition relative to the amount(s) (in moles or a molar concentration) of one or more other component of the composition, that together make up the whole (100%). It is understood that percent composition and % total molar amount can be converted between each other where the molecular weight of all of the relevant components is known.
- the term antibody includes intact antibodies and binding fragments thereof. A binding fragment refers to a molecule other than an intact antibody that comprises a portion of an intact antibody that binds the antigen to which the intact antibody binds.
- binding fragments include Fv, Fab', Fab'-SH, F(ab')2; diabodies; linear antibodies; single-chain antibody molecules (e.g., scFv); and multispecific antibodies formed from antibody fragments.
- scFv antibodies are described in Houston JS. 1991. Methods in Enzymol. 203:46-96.
- antibody fragments comprise single chain polypeptides having the characteristics of a VH domain, namely being able to assemble together with a VL domain, or of a VL domain, namely being able to assemble together with a VH domain to a functional antigen binding site and thereby providing the antigen binding property of full-length antibodies.
- Specific binding of an antibody to its target antigen(s) means an affinity of at least 10 6 , 10 7 , 10 8 , 10 9 , or 10 10 M -1 . Specific binding is detectably higher in magnitude and distinguishable from non-specific binding occurring to at least one unrelated target. Specific binding can be the result of formation of bonds between particular functional groups or particular spatial fit (e.g., lock and key type) whereas nonspecific binding is usually the result of van der Waals forces. Specific binding does not however necessarily imply that an antibody or fusion protein binds one and only one target.
- a basic antibody structural unit is a tetramer of subunits.
- Each tetramer includes two identical pairs of polypeptide chains, each pair having one "light” (about 25 kDa) and one "heavy” chain (about 50-70 kDa).
- the amino-terminal portion of each chain includes a variable region of about 100 to 110 or more amino acids primarily responsible for antigen recognition. This variable region is initially expressed linked to a cleavable signal peptide.
- the variable region without the signal peptide is sometimes referred to as a mature variable region.
- a light chain mature variable region means a light chain variable region without the light chain signal peptide.
- variable region does not mean that a signal sequence is necessarily present; and in fact signal sequences are cleaved once the antibodies or fusion proteins have been expressed and secreted.
- a pair of heavy and light chain variable regions defines a binding region of an antibody. The carboxy-terminal portion of the light and heavy chains respectively defines light and heavy chain constant regions. The heavy chain constant region is primarily responsible for effector function. In IgG antibodies, the heavy chain constant region is divided into CH1, hinge, CH2, and CH3 regions. The CH1 region binds to the light chain constant region by disulfide and noncovalent bonding.
- the hinge region provides flexibility between the binding and effector regions of an antibody and also provides sites for intermolecular disulfide bonding between the two heavy chain constant regions in a tetramer subunit.
- the CH2 and CH3 regions are the primary site of effector functions and FcR binding.
- Light chains are classified as either kappa or lambda.
- Heavy chains are classified as gamma, mu, alpha, delta, or epsilon, and define the antibody's isotype as IgG, IgM, IgA, IgD and IgE, respectively.
- variable and constant regions are joined by a "J" segment of about 12 or more amino acids, with the heavy chain also including a "D” segment of about 10 or more amino acids.
- J The mature variable regions of each light/heavy chain pair form the antibody binding site.
- an intact antibody has two binding sites, i.e., is divalent. In natural antibodies, the binding sites are the same. However, bispecific antibodies can be made in which the two binding sites are different (see, e.g., Songsivilai S, Lachmann PC. 1990.
- variable regions all exhibit the same general structure of relatively conserved framework regions (FR) joined by three hypervariable regions, also called complementarity determining regions or CDRs.
- FR relatively conserved framework regions
- CDRs complementarity determining regions
- variable heavy CDRs can be referred to as CDRH1, CDRH2 and CDRH3; the variable light chain CDRs can be referred to as CDR L 1, CDR L 2 and CDR L 3.
- the assignment of amino acids to each domain is in accordance with the definitions of Kabat EA, et al. 1987 and 1991. Sequences of Proteins of Immunological Interest (National Institutes of Health, Bethesda, MD) or Chothia C, Lesk AM. 1987. Canonical Structures for the Hypervariable Regions of Immunoglobulins. J Mol Biol 196:901-917; Chothia C, et al. 1989. Conformations of Immunoglobulin Hypervariable Regions. Nature 342:877-883.
- Kabat also provides a widely used numbering convention (Kabat numbering) in which corresponding residues between different heavy chain variable regions or between different light chain variable regions are assigned the same number. Although Kabat numbering can be used for antibody constant regions, EU numbering is more commonly used, as is the case in this application. Although specific sequences are provided for exemplary antibodies disclosed herein, it will be appreciated that after expression of protein chains one to several amino acids at the amino or carboxy terminus of the light and/or heavy chain, particularly a heavy chain C-terminal lysine residue, may be missing or derivatized in a proportion or all of the molecules. [0124] The term "epitope” refers to a site on an antigen to which an antibody or extracellular trap segment binds.
- An epitope on a protein can be formed from contiguous amino acids or noncontiguous amino acids juxtaposed by tertiary folding of one or more proteins.
- Epitopes formed from contiguous amino acids also known as linear epitopes
- epitopes formed by tertiary folding also known as conformational epitopes
- An epitope typically includes at least 3, and more usually, at least 5 or 8-10 amino acids in a unique spatial conformation. Methods of determining spatial conformation of epitopes include, for example, x-ray crystallography and 2-dimensional nuclear magnetic resonance.
- Antibodies that recognize the same or overlapping epitopes can be identified in a simple immunoassay showing the ability of one antibody to compete with the binding of another antibody to a target antigen.
- the epitope of an antibody can also be defined by X-ray crystallography of the antibody (or Fab fragment) bound to its antigen to identify contact residues.
- two antibodies have the same epitope if all amino acid mutations in the antigen that reduce or eliminate binding of one antibody reduce or eliminate binding of the other.
- Two antibodies have overlapping epitopes if some amino acid mutations that reduce or eliminate binding of one antibody reduce or eliminate binding of the other.
- Competition between antibodies is determined by an assay in which an antibody under test inhibits specific binding of a reference antibody to a common antigen (see, e.g., Junghans et al., Cancer Res. 50: 1495, 1990).
- a test antibody competes with a reference antibody if an excess of a test antibody (e.g., at least 2x, 5x, 10x, 20x or l00x) inhibits binding of the reference antibody by at least 50%.
- the test antibody inhibits binding of the reference antibody by 75%, 90%, or 99% as measured in a competitive binding assay.
- Antibodies identified by competition assay include antibodies binding to the same epitope as the reference antibody and antibodies binding to an adjacent epitope sufficiently proximal to the epitope bound by the reference antibody for steric hindrance to occur.
- the term “conjugate” refers to a protein covalently linked to a polymer. In some embodiments, the protein is an antibody.
- conjugated and free with reference to a protein or antibody are used interchangeably to denote the protein or antibody that is not conjugated to a polymer (e.g., not conjugated to a phosphorylcholine-containing polymer).
- VEGF Trap or similar term denotes the VEGF binding domains (e.g., VEGFR1 domain 2, VEGFR2 domain 3). This fragment allows for the protein to work as a VEGF trap, preventing VEGF from binding to cellularly expressed VEGF receptors. An example of this sequence can be found in Table 0.5. In some embodiments, the VEGF Trap only includes VEGFR1 domain 2, VEGFR2 domain 3.
- VEGF Trap proteins are known in the art and can be found, for example in U.S. Pub. No. 20150376271, the entirety of which, with respect to various VEGF Trap embodiments (which are VEGFR proteins or fragments thereof) and fusions thereof, is incorporated herein by reference.
- the term “VEGF Trap” or similar term refers to a full length extracellular region or any portion thereof, or combination of portions from different VEGF receptors that can antagonize signaling between at least one VEGF and VEGFR.
- the term "patient” includes human and other mammalian subjects that receive either prophylactic or therapeutic treatment. In some embodiments, the patient is a human patient.
- amino acids are grouped as follows: Group I (hydrophobic side chains): met, ala, val, leu, ile; Group II (neutral hydrophilic side chains): cys, ser, thr; Group III (acidic side chains): asp, glu; Group IV (basic side chains): asn, gin, his, lys, arg; Group V (residues influencing chain orientation): gly, pro; and Group VI (aromatic side chains): trp, tyr, phe. Conservative substitutions involve substitutions between amino acids in the same class.
- Percentage sequence identities are determined with antibody sequences maximally aligned by the Kabat numbering convention for a variable region or EU numbering for a constant region. After alignment, if a subject antibody region (e.g., the entire mature variable region of a heavy or light chain) is being compared with the same region of a reference antibody, the percentage sequence identity between the subject and reference antibody regions is the number of positions occupied by the same amino acid in both the subject and reference antibody region divided by the total number of aligned positions of the two regions, with gaps not counted, multiplied by 100 to convert to percentage.
- Sequence identities of other sequences can be determined by aligning sequences using algorithms, such as BESTFIT, FASTA, and TFASTA in the Wisconsin Genetics Software Package Release 7.0, Genetics Computer Group, 575 Science Dr., Madison, WI, using default gap parameters, or by inspection, and the best alignment (i.e., resulting in the highest percentage of sequence similarity over a comparison window). Percentage of sequence identity is calculated by comparing two optimally aligned sequences over a window of comparison, determining the number of positions at which the identical residues occurs in both sequences to yield the number of matched positions, dividing the number of matched positions by the total number of positions in the window of comparison (i.e., the window size), and multiplying the result by 100 to yield the percentage of sequence identity.
- algorithms such as BESTFIT, FASTA, and TFASTA in the Wisconsin Genetics Software Package Release 7.0, Genetics Computer Group, 575 Science Dr., Madison, WI, using default gap parameters, or by inspection, and the best alignment (i.e., resulting in
- compositions or methods "comprising" one or more recited elements may include other elements not specifically recited.
- a composition that comprises an antibody may contain the antibody alone or in combination with other ingredients, such as an antibody conjugate.
- Compositions can comprise a conjugated antibody and an unconjugated antibody.
- the term "antibody-dependent cellular cytotoxicity", or ADCC is a mechanism for inducing cell death that depends upon the interaction of antibody-coated target cells (i.e., cells with bound antibody) with immune cells possessing lytic activity (also referred to as effector cells). Such effector cells include natural killer cells, monocytes/macrophages and neutrophils.
- ADCC is triggered by interactions between the Fc region of an antibody bound to a cell and Fcy receptors, particularly Fc ⁇ RI and Fc ⁇ RIII, on immune effector cells such as neutrophils, macrophages and natural killer cells.
- Fcy receptors particularly Fc ⁇ RI and Fc ⁇ RIII
- the target cell is eliminated by phagocytosis or lysis, depending on the type of mediating effector cell. Death of the antibody-coated target cell occurs as a result of effector cell activity.
- opsonization also known as "antibody-dependent cellular phagocytosis", or ADCP, refers to the process by which antibody-coated cells are internalized, either in whole or in part, by phagocytic immune cells (e.g., macrophages, neutrophils and dendritic cells) that bind to an immunoglobulin Fc region.
- phagocytic immune cells e.g., macrophages, neutrophils and dendritic cells
- CDC complement-dependent cytotoxicity refers to a mechanism for inducing cell death in which an Fc effector domain(s) of a target-bound antibody activates a series of enzymatic reactions culminating in the formation of holes in the target cell membrane.
- antigen-antibody complexes such as those on antibody- coated target cells bind and activate complement component Clq which in turn activates the complement cascade leading to target cell death.
- Activation of complement may also result in deposition of complement components on the target cell surface that facilitate ADCC by binding complement receptors (e.g., CR3) on leukocytes.
- complement receptors e.g., CR3
- a humanized antibody is a genetically engineered antibody in which the CDRs from a non-human "donor” antibody are grafted into human "acceptor” antibody sequences (see, e.g., Queen, US 5,530,101 and 5,585,089; Winter, US 5,225,539, Carter, US 6,407,213, Adair, US 5,859,205 6,881,557, Foote, US 6,881,557).
- the acceptor antibody sequences can be, for example, a mature human antibody sequence, a composite of such sequences, a consensus sequence of human antibody sequences, or a germline region sequence.
- a humanized antibody is an antibody having some or all CDRs entirely or substantially from a donor antibody and variable region framework sequences and constant regions, if present, entirely or substantially from human antibody sequences.
- a humanized heavy chain has at least one, two and usually all three CDRs entirely or substantially from a donor antibody heavy chain, and a heavy chain variable region framework sequence and heavy chain constant region, if present, substantially from human heavy chain variable region framework and constant region sequences.
- a humanized light chain has at least one, two and usually all three CDRs entirely or substantially from a donor antibody light chain, and a light chain variable region framework sequence and light chain constant region, if present, substantially from human light chain variable region framework and constant region sequences.
- a humanized antibody comprises a humanized heavy chain and a humanized light chain.
- a CDR in a humanized antibody is substantially from a corresponding CDR in a non-human antibody when at least 85%, 90%, 95% or 100% of corresponding residues (as defined by Kabat) are identical between the respective CDRs.
- the variable region framework sequences of an antibody chain or the constant region of an antibody chain are substantially from a human variable region framework sequence or human constant region respectively when at least 85, 90, 95 or 100% of corresponding residues defined by Kabat are identical.
- humanized antibodies often incorporate all six CDRs (which can be as defined by Kabat) from a mouse antibody, they can also be made with less than all CDRs (e.g., at least 3, 4, or 5 CDRs from a mouse antibody) (e.g., De Pascalis R, Iwahashi M, Tamura M, et al. 2002. Grafting “Abbreviated” Complementary-Determining Regions Containing Specificity-Determining Residues Essential for Ligand Contact to Engineer a Less Immunogenic Humanized Monoclonal Antibody. J Immunol. 169:3076-3084; Vajdos FF, Adams CW, Breece TN, Presta LG, de Vos AM, Sidhu, SS.
- CDRs which can be as defined by Kabat
- a chimeric antibody is an antibody in which the mature variable regions of light and heavy chains of a non-human antibody (e.g., a mouse) are combined with human light and heavy chain constant regions. Such antibodies substantially or entirely retain the binding specificity of the mouse antibody and are about two-thirds human sequence.
- a veneered antibody is a type of humanized antibody that retains some and usually all of the CDRs and some of the non-human variable region framework residues of a non-human antibody but replaces other variable region framework residues that may contribute to B- or T-cell epitopes, for example exposed residues (Padlan EA.1991. A possible procedure for reducing the immunogenicity of antibody variable domains while preserving their ligand- binding properties. Mol Immunol.
- a human antibody can be isolated from a human, or otherwise result from expression of human immunoglobulin genes (e.g., in a transgenic mouse, in vitro or by phage display).
- Methods for producing human antibodies include the trioma method of ⁇ stberg L, Pursch E.1983. Human x (mouse x human) hybridomas stably producing human antibodies. Hybridoma 2:361-367; ⁇ stberg, U.S. Patent No.
- Polymer refers to a series of monomer groups linked together. A polymer is composed of multiple units of a single monomer (a homopolymer) or different monomers (a heteropolymer).
- High MW polymers are prepared from monomers that include, but are not limited to, acrylates, methacrylates, acrylamides, methacrylamides, styrenes, vinylpyridine, vinylpyrrolidone and vinyl esters such as vinyl acetate. Additional monomers are useful in high MW polymers . When two different monomers are used, the two monomers are called “comonomers,” meaning that the different monomers are copolymerized to form a single polymer.
- one monomer is a phosphorylcholine-containing monomer
- a second comonomer is a different comonomer with a different pendant group chemistry (for example a click chemistry to be a reactive group / recipient of a chemical reaction to be conjugated, for example, to a small molecule bioactive or to a chemical linker).
- the polymer can be linear or branched. When the polymer is branched, each polymer chain is referred to as a “polymer arm.” The end of the polymer arm linked to the initiator moiety is the proximal end, and the growing-chain end of the polymer arm is the distal end.
- the polymer arm end group can be the radical scavenger, or another group.
- “Initiator” refers to a compound capable of initiating a polymerization using monomers or comonomers.
- the polymerization can be a conventional free radical polymerization or a controlled/”living” radical polymerization, such as Atom Transfer Radical Polymerization (ATRP), Reversible Addition-Fragmentation-Termination (RAFT) polymerization or nitroxide mediated polymerization (NMP).
- ATRP Atom Transfer Radical Polymerization
- RAFT Reversible Addition-Fragmentation-Termination
- NMP nitroxide mediated polymerization
- the polymerization can be a “pseudo” controlled polymerization, such as degenerative transfer.
- the initiator When the initiator is suitable for ATRP, it contains a labile bond which can be homolytically cleaved to form an initiator fragment, I, being a radical capable of initiating a radical polymerization, and a radical scavenger, I’, which reacts with the radical of the growing polymer chain to reversibly terminate the polymerization.
- the radical scavenger I’ is typically a halogen, but can also be an organic moiety, such as a nitrile.
- the initiator contains one of more 2-bromoisobutyrate groups as sites for polymerization via ATRP.
- a “chemical linker” refers to a chemical moiety that links two groups together, such as a half-life extending moiety and a protein.
- the linker can be cleavable or non-cleavable.
- Cleavable linkers can be hydrolyzable, enzymatically cleavable, pH sensitive, photolabile, or disulfide linkers, among others.
- Other linkers include homobifunctional and heterobifunctional linkers.
- a “linking group” is a functional group capable of forming a covalent linkage consisting of one or more bonds to a bioactive agent. Non-limiting examples include those illustrated in Table 1 of WO2013059137 (incorporated by reference).
- reactive group refers to a group that is capable of reacting with another chemical group to form a covalent bond, i.e. is covalently reactive under suitable reaction conditions, and generally represents a point of attachment for another substance.
- the reactive group is a moiety, such as maleimide or succinimidyl ester, is capable of chemically reacting with a functional group on a different moiety to form a covalent linkage.
- Reactive groups generally include nucleophiles, electrophiles and photoactivatable groups.
- Phosphorylcholine also denoted as “PC,” refers to the following: where * denotes the point of attachment.
- the phosphorylcholine is a zwitterionic group and includes salts (such as inner salts), and protonated and deprotonated forms thereof.
- “Phosphorylcholine containing polymer” is a polymer that contains phosphorylcholine.
- “Zwitterion containing polymer” refers to a polymer that contains a zwitterion.
- Poly(acryloyloxyethyl phosphorylcholine) containing polymer refers to a polymer containing 2-(acryloyloxy)ethyl-2-(trimethylammonium)ethyl phosphate (HEA-PC shown below in Example 6) as monomer.
- Poly(methacryloyloxyethyl phosphorylcholine) containing polymer refers to a polymer containing 2-(methacryloyloxy)ethyl-2-(trimethylammonium)ethyl phosphate (HEMA-PC or MPC) as monomer (see below):
- Molecular weight in the context of the polymer can be expressed as either a number average molecular weight, or a weight average molecular weight or a peak molecular weight. Unless otherwise indicated, all references to molecular weight herein refer to the peak molecular weight. These molecular weight determinations, number average (Mn), weight average (Mw) and peak (Mp), can be measured using size exclusion chromatography or other liquid chromatography techniques.
- molecular weight values can also be used, such as the use of endgroup analysis or the measurement of colligative properties (e.g., freezing point depression, boiling point elevation, or osmotic pressure) to determine number average molecular weight, or the use of light scattering techniques, ultracentrifugation or viscometry to determine weight average molecular weight.
- the molecular weight is measured by SEC-MALS (size exclusion chromatography – multi angle light scattering).
- the multi-angle light scattering includes 18-angle MALS.
- the multi-angle light scattering includes 3-angle and 18-angle MALS.
- the polymeric reagents are typically polydisperse (i.e., number average molecular weight and weight average molecular weight of the polymers are not equal), and can possess low polydispersity values of, for example, less than about 1.5, as judged, for example, by the PDI value derived from the SEC-MALS measurement.
- the polydispersities (PDI) are in the range of about 1.4 to about 1.2. In some embodiments the PDI is less than about 1.15, 1.10, 1.05, or 1.03.
- the phrase “a” or “an” entity refers to one or more of that entity; for example, a compound refers to one or more compounds or at least one compound.
- “About” means variation one might see in measurements taken among different instruments, samples, and sample preparations.
- “Protected,” “protected form,” “protecting group” and “protective group” refer to the presence of a group (i.e., the protecting group) that prevents or blocks reaction of a particular chemically reactive functional group in a molecule under certain reaction conditions. Protecting groups vary depending upon the type of chemically reactive group being protected as well as the reaction conditions to be employed and the presence of additional reactive or protecting groups in the molecule, if any.
- Suitable protecting groups include those such as found in the treatise by Greene et al., “Protective Groups In Organic Synthesis,” 3 rd Edition, John Wiley and Sons, Inc., New York, 1999.
- Alkyl refers to a straight or branched, saturated, aliphatic radical having the number of carbon atoms indicated.
- C 1 -C 6 alkyl includes, but is not limited to, methyl, ethyl, propyl, isopropyl, butyl, isobutyl, sec-butyl, tert-butyl, pentyl, isopentyl, hexyl, etc.
- alkyl groups include, but are not limited to heptyl, octyl, nonyl, decyl, etc.
- Alkyl can include any number of carbons, such as 1-2, 1-3, 1-4, 1-5, 1-6, 1-7, 1-8, 1-9, 1-10, 2-3, 2-4, 2-5, 2-6, 3-4, 3-5, 3-6, 4-5, 4-6 and 5-6.
- the alkyl group is typically monovalent, but can be divalent, such as when the alkyl group links two moieties together.
- Alkylene refers to an alkyl group, as defined above, linking at least two other groups, i.e., a divalent hydrocarbon radical.
- the two moieties linked to the alkylene can be linked to the same atom or different atoms of the alkylene.
- a straight chain alkylene can be the bivalent radical of -(CH2)n, where n is 1, 2, 3, 4, 5 or 6.
- Alkylene groups include, but are not limited to, methylene, ethylene, propylene, isopropylene, butylene, isobutylene, sec-butylene, pentylene and hexylene.
- R’, R” and R”’ each independently refer to hydrogen, unsubstituted (C 1 -C 8 )alkyl and heteroalkyl, unsubstituted aryl, aryl substituted with 1-3 halogens, unsubstituted alkyl, alkoxy or thioalkoxy groups, or aryl-(C1-C4)alkyl groups.
- R’ and R” are attached to the same nitrogen atom, they can be combined with the nitrogen atom to form a 5-, 6-, or 7-membered ring.
- -NR’R is meant to include 1-pyrrolidinyl and 4-morpholinyl.
- alkyl includes groups such as haloalkyl (e.g., -CF 3 and -CH 2 CF 3 ) and acyl (e.g., -C(O)CH 3 , -C(O)CF 3 , -C(O)CH 2 OCH 3 , and the like).
- the substituted alkyl and heteroalkyl groups have from 1 to 4 substituents.
- the substituted alkyl and heteroalkyl groups have 1, 2 or 3 substituents. Exceptions are those perhalo alkyl groups (e.g., pentafluoroethyl and the like) .
- R’, R”, R”’ and R each independently refer to hydrogen, substituted or unsubstituted heteroalkyl, substituted or unsubstituted aryl, e.g., aryl substituted with 1-3 halogens, substituted or unsubstituted alkyl, alkoxy or thioalkoxy groups, or arylalkyl groups.
- each of the R groups is independently selected as are each R’, R”, R’” and R”” groups when more than one of these groups is present.
- R’ and R” are attached to the same nitrogen atom, they can be combined with the nitrogen atom to form a 5-, 6-, or 7-membered ring.
- -NR’R is meant to include, but not be limited to, 1-pyrrolidinyl and 4-morpholinyl.
- alkyl is meant to include groups including carbon atoms bound to groups other than hydrogen groups, such as haloalkyl (e.g., -CF 3 and –CH 2 CF 3 ) and acyl (e.g., -C(O)CH 3 , -C(O)CF 3 , -C(O)CH 2 OCH 3 , and the like).
- Alkoxy refers to an alkyl group having an oxygen atom that either connects the alkoxy group to the point of attachment or is linked to two carbons of the alkoxy group.
- Alkoxy groups include, for example, methoxy, ethoxy, propoxy, iso-propoxy, butoxy, 2-butoxy, iso-butoxy, sec-butoxy, tert-butoxy, pentoxy, hexoxy, etc.
- the alkoxy groups can be further substituted with a variety of substituents described within. For example, the alkoxy groups can be substituted with halogens to form a “halo-alkoxy” group.
- Carboxyalkyl means an alkyl group (as defined herein) substituted with a carboxy group.
- carboxycycloalkyl means a cycloalkyl group (as defined herein) substituted with a carboxy group.
- alkoxyalkyl means an alkyl group (as defined herein) substituted with an alkoxy group.
- carboxy employed herein refers to carboxylic acids and their esters.
- Haloalkyl refers to alkyl as defined above where some or all of the hydrogen atoms are substituted with halogen atoms.
- Halogen represents chloro or fluoro but may also be bromo or iodo.
- haloalkyl includes trifluoromethyl, fluoromethyl, 1,2,3,4,5-pentafluoro-phenyl, etc.
- perfluoro defines a compound or radical which has all available hydrogens that are replaced with fluorine.
- perfluorophenyl refers to 1,2,3,4,5-pentafluorophenyl
- perfluoromethyl refers to 1,1,1-trifluoromethyl
- perfluoromethoxy refers to 1,1,1-trifluoromethoxy.
- “Fluoro-substituted alkyl” refers to an alkyl group where one, some, or all hydrogen atoms have been replaced by fluorine.
- “Cytokine” is a member of a group of protein signaling molecules that may participate in cell-cell communication in immune and inflammatory responses. Cytokines are typically small, water-soluble glycoproteins that have a mass of about 8-35 kDa.
- Cycloalkyl refers to a cyclic hydrocarbon group that contains from about 3 to 12, from 3 to 10, or from 3 to 7 endocyclic carbon atoms. Cycloalkyl groups include fused, bridged and spiro ring structures.
- Endocyclic refers to an atom or group of atoms which comprise part of a cyclic ring structure.
- Exocyclic refers to an atom or group of atoms which are attached but do not define the cyclic ring structure.
- Cyclic alkyl ether refers to a 4 or 5 member cyclic alkyl group having 3 or 4 endocyclic carbon atoms and 1 endocyclic oxygen or sulfur atom (e.g., oxetane, thietane, tetrahydrofuran, tetrahydrothiophene); or a 6 to 7 member cyclic alkyl group having 1 or 2 endocyclic oxygen or sulfur atoms (e.g., tetrahydropyran, 1,3-dioxane, 1,4-dioxane, tetrahydrothiopyran, 1,3-dithiane, 1,4-dithiane, 1,4-oxathiane).
- alkenyl refers to either a straight chain or branched hydrocarbon of 2 to 6 carbon atoms, having at least one double bond.
- alkenyl groups include, but are not limited to, vinyl, propenyl, isopropenyl, 1-butenyl, 2-butenyl, isobutenyl, butadienyl, 1-pentenyl, 2-pentenyl, isopentenyl, 1,3-pentadienyl, 1,4-pentadienyl, 1-hexenyl, 2-hexenyl, 3-hexenyl, 1,3-hexadienyl, 1,4-hexadienyl, 1,5-hexadienyl, 2,4-hexadienyl, or 1,3,5-hexatrienyl.
- Alkenyl groups can also have from 2 to 3, 2 to 4, 2 to 5, 3 to 4, 3 to 5, 3 to 6, 4 to 5, 4 to 6 and 5 to 6 carbons.
- the alkenyl group is typically monovalent, but can be divalent, such as when the alkenyl group links two moieties together.
- Alkenylene refers to an alkenyl group, as defined above, linking at least two other groups, i.e., a divalent hydrocarbon radical.
- the two moieties linked to the alkenylene can be linked to the same atom or different atoms of the alkenylene.
- Alkenylene groups include, but are not limited to, ethenylene, propenylene, isopropenylene, butenylene, isobutenylene, sec-butenylene, pentenylene and hexenylene.
- Alkynyl refers to either a straight chain or branched hydrocarbon of 2 to 6 carbon atoms, having at least one triple bond.
- alkynyl groups include, but are not limited to, acetylenyl, propynyl, 1-butynyl, 2-butynyl, isobutynyl, sec-butynyl, butadiynyl, 1-pentynyl, 2-pentynyl, isopentynyl, 1,3-pentadiynyl, 1,4-pentadiynyl, 1-hexynyl, 2-hexynyl, 3-hexynyl, 1,3-hexadiynyl, 1,4-hexadiynyl, 1,5-hexadiynyl, 2,4-hexadiynyl, or 1,3,5-hexatriynyl.
- Alkynyl groups can also have from 2 to 3, 2 to 4, 2 to 5, 3 to 4, 3 to 5, 3 to 6, 4 to 5, 4 to 6 and 5 to 6 carbons.
- the alkynyl group is typically monovalent, but can be divalent, such as when the alkynyl group links two moieties together.
- Alkynylene refers to an alkynyl group, as defined above, linking at least two other groups, i.e., a divalent hydrocarbon radical.
- the two moieties linked to the alkynylene can be linked to the same atom or different atoms of the alkynylene.
- Alkynylene groups include, but are not limited to, ethynylene, propynylene, butynylene, sec-butynylene, pentynylene and hexynylene.
- Cycloalkyl refers to a saturated or partially unsaturated, monocyclic, fused bicyclic or bridged polycyclic ring assembly containing from 3 to 12 ring atoms, or the number of atoms indicated.
- Monocyclic rings include, for example, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, and cyclooctyl.
- Bicyclic and polycyclic rings include, for example, norbornane, decahydronaphthalene and adamantane.
- C3-8cycloalkyl includes cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cyclooctyl, and norbornane.
- Cycloalkylene refers to a cycloalkyl group, as defined above, linking at least two other groups, i.e., a divalent hydrocarbon radical. The two moieties linked to the cycloalkylene can be linked to the same atom or different atoms of the cycloalkylene.
- Cycloalkylene groups include, but are not limited to, cyclopropylene, cyclobutylene, cyclopentylene, cyclohexylene, and cyclooctylene.
- “Heterocycloalkyl” refers to a ring system having from 3 ring members to about 20 ring members and from 1 to about 5 heteroatoms such as N, O and S. Additional heteroatoms can also be useful, including, but not limited to, B, Al, Si and P. The heteroatoms can also be oxidized, such as, but not limited to, -S(O)- and -S(O) 2 -.
- heterocycle includes, but is not limited to, tetrahydrofuranyl, tetrahydrothiophenyl, morpholino, pyrrolidinyl, pyrrolinyl, imidazolidinyl, imidazolinyl, pyrazolidinyl, pyrazolinyl, piperazinyl, piperidinyl, indolinyl, quinuclidinyl and 1,4-dioxa-8-aza-spiro[4.5]dec-8-yl.
- Heterocycloalkylene refers to a heterocyclalkyl group, as defined above, linking at least two other groups.
- Aryl refers to a monocyclic or fused bicyclic, tricyclic or greater, aromatic ring assembly containing 6 to 16 ring carbon atoms.
- aryl may be phenyl, benzyl or naphthyl.
- Arylene means a divalent radical derived from an aryl group.
- Aryl groups can be mono-, di- or tri-substituted by one, two or three radicals selected from alkyl, alkoxy, aryl, hydroxy, halogen, cyano, amino, amino-alkyl, trifluoromethyl, alkylenedioxy and oxy-C2-C3-alkylene; all of which are optionally further substituted, for instance as hereinbefore defined; or 1- or 2-naphthyl; or 1- or 2-phenanthrenyl.
- Alkylenedioxy is a divalent substitute attached to two adjacent carbon atoms of phenyl, e.g. methylenedioxy or ethylenedioxy.
- Oxy-C 2 -C 3 -alkylene is also a divalent substituent attached to two adjacent carbon atoms of phenyl, e.g. oxyethylene or oxypropylene.
- phenyl e.g. oxyethylene or oxypropylene.
- An example for oxy- C 2 -C 3 -alkylene-phenyl is 2,3-dihydrobenzofuran-5-yl.
- the aryl is naphthyl, phenyl or phenyl mono- or disubstituted by alkoxy, phenyl, halogen, alkyl or trifluoromethyl, especially phenyl or phenyl-mono- or disubstituted by alkoxy, halogen or trifluoromethyl, and in particular phenyl.
- R substituted phenyl groups as R are, e.g.
- Arylene refers to an aryl group, as defined above, linking at least two other groups. The two moieties linked to the arylene are linked to different atoms of the arylene. Arylene groups include, but are not limited to, phenylene.
- Arylene-oxy refers to an arylene group, as defined above, where one of the moieties linked to the arylene is linked through an oxygen atom. Arylene-oxy groups include, but are not limited to, phenylene-oxy.
- Two of the substituents on adjacent atoms of the aryl or heteroaryl ring may optionally be replaced with a substituent of the formula -T-C(O)-(CH 2 ) q -U-, wherein T and U are independently -NH-, -O-, -CH2- or a single bond, and q is an integer of from 0 to 2.
- two of the substituents on adjacent atoms of the aryl or heteroaryl ring may optionally be replaced with a substituent of the formula -A-(CH2)r-B-, wherein A and B are independently -CH2-, -O-, -NH-, -S-, -S(O)-, -S(O)2-, -S(O)2NR’- or a single bond, and r is an integer of from 1 to 3.
- One of the single bonds of the new ring so formed may optionally be replaced with a double bond.
- two of the substituents on adjacent atoms of the aryl or heteroaryl ring may optionally be replaced with a substituent of the formula -(CH 2 ) s -X-(CH 2 ) t -, where s and t are independently integers of from 0 to 3, and X is -O-, -NR’-, -S-, -S(O)-, -S(O)2-, or -S(O)2NR’-.
- the substituent R’ in -NR’- and -S(O)2NR’- is selected from hydrogen or unsubstituted (C1-C6)alkyl.
- Heteroaryl refers to a monocyclic or fused bicyclic or tricyclic aromatic ring assembly containing 5 to 16 ring atoms, where from 1 to 4 of the ring atoms are a heteroatom each N, O or S.
- heteroaryl includes pyridyl, indolyl, indazolyl, quinoxalinyl, quinolinyl, isoquinolinyl, benzothienyl, benzofuranyl, furanyl, pyrrolyl, thiazolyl, benzothiazolyl, oxazolyl, isoxazolyl, triazolyl, tetrazolyl, pyrazolyl, imidazolyl, thienyl, or any other radicals substituted, especially mono- or di-substituted, by e.g. alkyl, nitro or halogen.
- Pyridyl represents 2-, 3- or 4-pyridyl, advantageously 2- or 3-pyridyl.
- Thienyl represents 2- or 3-thienyl.
- quinolinyl represents 2-, 3- or 4-quinolinyl.
- isoquinolinyl represents 1-, 3- or 4-isoquinolinyl.
- benzopyranyl, benzothiopyranyl can represent 3-benzopyranyl or 3-benzothiopyranyl, respectively.
- thiazolyl can represent 2- or 4-thiazolyl.
- triazolyl can be 1-, 2- or 5-(1,2,4-triazolyl).
- tetrazolyl can be 5-tetrazolyl.
- heteroaryl is pyridyl, indolyl, quinolinyl, pyrrolyl, thiazolyl, isoxazolyl, triazolyl, tetrazolyl, pyrazolyl, imidazolyl, thienyl, furanyl, benzothiazolyl, benzofuranyl, isoquinolinyl, benzothienyl, oxazolyl, indazolyl, or any of the radicals substituted, especially mono- or di-substituted.
- heteroalkyl refers to an alkyl group having from 1 to 3 heteroatoms such as N, O and S.
- heteroalkylene refers to a heteroalkyl group, as defined above, linking at least two other groups. The two moieties linked to the heteroalkylene can be linked to the same atom or different atoms of the heteroalkylene.
- Electrophile refers to an ion or atom or collection of atoms, which may be ionic, having an electrophilic center, i.e., a center that is electron seeking, capable of reacting with a nucleophile.
- An electrophile (or electrophilic reagent) is a reagent that forms a bond to its reaction partner (the nucleophile) by accepting both bonding electrons from that reaction partner.
- Nucleophile refers to an ion or atom or collection of atoms, which may be ionic, having a nucleophilic center, i.e., a center that is seeking an electrophilic center or capable of reacting with an electrophile.
- a nucleophile is a reagent that forms a bond to its reaction partner (the electrophile) by donating both bonding electrons.
- a “nucleophilic group” refers to a nucleophile after it has reacted with a reactive group. Non limiting examples include amino, hydroxyl, alkoxy, haloalkoxy and the like. [0191] “Maleimido” refers to a pyrrole-2,5-dione-1-yl group having the structure:
- a sulfhydryl e.g., a thio alkyl
- a sulfhydryl e.g., a thio alkyl
- “naturally occurring amino acids” found in proteins and polypeptides are L-alanine, L-arginine, L-asparagine, L-aspartic acid, L-cysteine, L-glutamine, L-glutamic acid, L-glycine, L-histidine, L-isoleucine, L-leucine, L-lysine, L-methionine, L-phenylalanine, L-proline, L-serine, L-threonine, L-tryptophan, L-tyrosine, and or L-valine.
- “Non-naturally occurring amino acids” found in proteins are any amino acid other than those recited as naturally occurring amino acids.
- Non-naturally occurring amino acids include, without limitation, the D isomers of the naturally occurring amino acids, and mixtures of D and L isomers of the naturally occurring amino acids.
- Other amino acids such as N-alpha- methyl amino acids (e.g. sarcosine), 4-hydroxyproline, desmosine, isodesmosine, 5-hydroxylysine, epsilon-N-methyllysine, 3-methylhistidine, although found in naturally occurring proteins, are considered to be non-naturally occurring amino acids found in proteins for the purpose of this disclosure as they are generally introduced by means other than ribosomal translation of mRNA.
- Linear in reference to the geometry, architecture, or overall structure of a polymer, refers to polymer having a single polymer arm.
- Branched in reference to the geometry, architecture, or overall structure of a polymer, refers to a polymer having 2 or more polymer “arms” extending from a core structure contained within an initiator.
- the initiator may be employed in an atom transfer radical polymerization (ATRP) reaction.
- a branched polymer may possess 2 polymer chains (arms), 3 polymer arms, 4 polymer arms, 5 polymer arms, 6 polymer arms, 7 polymer arms, 8 polymer arms, 9 polymer arms or more. Each polymer arm extends from a polymer initiation site.
- Each polymer initiation site is capable of being a site for the growth of a polymer chain by the addition of monomers.
- the site of polymer initiation on an initiator is typically an organic halide undergoing a reversible redox process catalyzed by a transition metal compound such as cuprous halide.
- the halide is a bromine.
- “Pharmaceutically acceptable excipient” or “pharmaceutically acceptable carrier” refers to an excipient that can be included in compositions and that causes no significant adverse toxicological effect on the patient and is approved or approvable by the FDA for therapeutic use, particularly in humans.
- Nonlimiting examples of pharmaceutically acceptable excipients or carriers include water, NaCl, normal saline solutions, lactated Ringer’s, normal sucrose, normal glucose and the like.
- a pharmaceutically acceptable carrier can be acceptable for administering directly into the eye of a patient (e.g., acceptable for intravitreal administration).
- Therapeutic proteins are administered in an effective regime meaning a dosage, route of administration and frequency of administration that delays the onset, reduces the severity, inhibits further deterioration, and/or ameliorates at least one sign or symptom of a disorder. If a patient is already suffering from a disorder, the regime can be referred to as a therapeutically effective regime.
- the regime can be referred to as a prophylactically effective regime.
- therapeutic or prophylactic efficacy can be observed in an individual patient relative to historical controls or past experience in the same patient.
- therapeutic or prophylactic efficacy can be demonstrated in a preclinical or clinical trial in a population of treated patients relative to a control population of untreated patients.
- the “biological half-life” of a substance is a pharmacokinetic parameter which specifies the time required for one half of the substance to be removed from a tissue or an organism following introduction of the substance.
- OG1786 is a 9-arm initiator used for polymer synthesis with the structure shown in FIG. 4, which depicts that salt form of OG1786 with trifluororacetic acid. OG1786 may be used as other salts are used or as the free base.
- OG1801 is an approximately (+/- 25%) 800 kDa polymer (either by Mn or Mp) made using OG1786 as an initiator for ATRP synthesis using the monomer HEMA- PC.
- OG1802 is OG1801 with a maleimide functionality added and is shown in FIG.10 wherein each of n1, n2, n3, n4, n5, n6, n7, n8 and n9 is an integer (positive) (from 0 up to about 3000) such that the total molecular weight of the polymer is (Mw) 800,000 ⁇ 20% Daltons.
- MALS Multi-angle light scattering
- This oscillating dipole will re-radiate light and can be measured using a MALS detector such as Wyatt miniDawn TREOS.
- the intensity of the radiated light depends on the magnitude of the dipole induced in the macromolecule which in turn is proportional to the polarizability of the macromolecule, the larger the induced dipole, and hence, the greater the intensity of the scattered light. Therefore, in order to analyze the scattering from a solution of such macromolecules, one should know their polarizability relative to the surrounding medium (e.g., the solvent).
- Two molar weight parameters that MALS determination employ are number average molecular weight (Mn) and weight average molecular weight (Mw) where the polydispersity index (PDI) equals Mw divided by Mn.
- SEC also allows another average molecular weight determination of the peak molecular weight Mp which is defined as the molecular weight of the highest peak at the SEC.
- the PDI is used as a measure of the broadness of a molecular weight distribution of a polymer and bioconjugate which is derived from conjugation of a discrete protein (e.g. OG1950) to a polydisperse biopolymer (e.g., OG1802).
- a discrete protein e.g. OG1950
- a polydisperse biopolymer e.g., OG1802
- Size exclusion chromatography is a chromatography technique in which molecules in solution are separated by their size. Typically an aqueous solution is applied to transport the sample through the column which is packed with resins of various pore sizes. The resin is expected to be inert to the analyte when passing through the column and the analytes separate from each other based on their unique size and the pore size characteristics of the selected column.
- Coupling the SEC with MALS or SEC/MALS provides accurate distribution of molar mass and size (root mean square radius) as opposed to relying on a set of SEC calibration standards.
- This type of arrangement has many advantages over traditional column calibration methods. Since the light scattering and concentration are measured for each eluting fraction, the molar mass and size can be determined independently of the elution position. This is particularly relevant for species with non-globular shaped macromolecules such as the biopolymers (OG1802) or bioconjugates (OG1953); such species typically do not elute in a manner that might be described by a set of column calibration standards.
- a SEC/MALS analysis includes a Waters HPLC system with Alliance 2695 solvent delivery module and Waters 2996 Photodiole Array Detector equipped with a Shodex SEC-HPLC column (7.8x300mm). This is connected online with a Wyatt miniDawn TREOS and Wyatt Optilab T-rEX differential refractometer.
- the Empower software from Waters can be used to control the Waters HPLC system and the ASTRA V 6.1.7.16 software from Wyatt can be used to acquire the MALS data from the Wyatt miniDawn TREOS, dn/dc data from the T-rEX detector and the mass recovery data using the A280 absorbance signal from the Waters 2996 Photodiole Array detector.
- SEC can be carried out at 1ml/min in 1xPBS pH 7.4, upon sample injection, the MALS and RI signals can be analyzed by the ASTRA software for determination of absolute molar mass (Mp, Mw, Mn) and polydisperse index (PDI).
- the calculation also involves the input dn/dc values for polymer and protein as 0.142 and 0.183, respectively.
- a formulation or composition that includes a first protein that is conjugated to a polymer (e.g., a phosphorylcholine-containing polymer) and a second protein that is unconjugated is provided.
- the first protein is an antibody and the second protein is an antibody. Both antibodies can be therapeutic antibodies.
- the composition is for treating an eye disorder in a subject.
- a formulation includes at least a polymer (e.g., a phosphorylcholine-containing polymer) and an unconjugated protein (e.g., an unconjugated antibody).
- formulation and composition can be used interchangeably.
- a formulation or therapeutically acceptable composition is safe for human use (e.g., administering to a human).
- a formulation or therapeutically acceptable composition is not an intermediate product generated during manufacture of a final product (e.g., that may be suitable for use in a human).
- a composition e.g., therapeutically acceptable composition
- a composition comprising any two proteins that can be the same or different in function, wherein one is conjugated to a polymer and the other is not conjugated to the polymer (or conjugated to any polymer or conjugated to any effective amount of a polymer).
- the composition can be for the treatment of an eye disorder.
- both of the proteins are therapeutics proteins for the treatment of an eye disorder.
- one or both of the proteins are therapeutics, antibodies and/or therapeutic antibodies.
- one antibody is conjugated to a polymer and the other antibody is not conjugated to a polymer.
- the antibody may be synthesized.
- the antibody may be a native sequence antibody.
- the antibody may be a Fab fragment.
- the antibody may be a Trap fragment.
- the antibody may be a fusion protein such as a Trap-antibody fusion protein.
- the antibody may be a peptide fragment.
- a non-antibody scaffold protein can be used instead of an antibody.
- a formulation or therapeutically acceptable composition
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer (the “conjugated protein”); a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer (the “unconjugated protein”); and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away (e.g., above or below) or more from the isoelectric point (pI) of the second protein.
- molar amount denotes a measure of the molar quantity of a molecule. In some embodiments, molar amount is a molar concentration (e.g., M, mM, ⁇ M, nM, etc.). In some embodiments, molar amount is expressed in units of moles (e.g., moles, millimoles, micromoles, etc.).
- pI isoelectric point of a protein has its customary and ordinary meaning to one of ordinary skill int the art, in view of the present disclosure. The pI denotes the pH at which the protein carries no net charge.
- the pI can be a previously known value for the same or similar protein, or be determined based on a model, or empirically. In some embodiments, the pI is a theoretically determined pI. In some embodiments, the pI is an empirically determined pI. [0209] Low-viscosity formulations of a protein conjugate (e.g., a protein conjugated to a phosphorylcholine-containing polymer) are also provided. A high concentration of the protein conjugate in the formulation can raise the viscosity of the formulation.
- a protein conjugate e.g., a protein conjugated to a phosphorylcholine-containing polymer
- Formulations (or therapeutically acceptable compositions) of the present disclosure can include the unconjugated protein (e.g., protein that is not conjugated to the phosphorylcholine-containing polymer) at any suitable % molar amount of the total molar amount of the polymer/polymer conjugate and the unconjugated protein.
- the formulation (or therapeutically acceptable composition) comprises the second protein (the unconjugated protein) at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the unconjugated protein at 1% of the total molar amount is at 1 ⁇ M
- the conjugate is at 99 ⁇ M.
- the formulation (or therapeutically acceptable compositions) comprises the second protein (the unconjugated protein) at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at, or at about 1% or more, e.g., about 2% or more, about 5% or more, about 10% or more, about 15% or more, about 20% or more, about 25% or more, about 30% or more, about 35% or more, about 40% or more, about 45% or more, about 50% or more, about 55% or more, about 60% or more, about 65% or more, about 70% or more, about 75% or more, about 80% or more, about 85% or more, or about 95% or less, about 90% or less, about 85% or less, about 80% or less, about 75% or less, about 70% or less, about 65% or less, about 60% or less, about 55% or less, about 50% or less, about 45% or less, about 40% or less, about 35% or less, about 30% or less of a total molar amount of the conjugate and the second protein, or optionally, the formulation includes the second protein at a percentage in a range defined by any two of the preced
- the formulation comprises the second protein (the unconjugated protein) at between about 5% and about 50%, or between about 15% and about 30% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein. In some embodiments, the formulation comprises the second protein (the unconjugated protein) at between about 15% and about 25% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at between about 25% and about 35% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein. In some embodiments, the formulation comprises the second protein (the unconjugated protein) at about 20% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at about 30% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- any formulation or composition provided herein comprises the second protein (the unconjugated protein) at more than 5% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- any formulation or composition provided herein comprises the second protein (the unconjugated protein) at more than 10% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- any composition or formulation herein includes two or more (e.g., 2, 3, 4, 5 or more) different second proteins (or unconjugated proteins), where the second molar amount is the sum of the molar amounts of the two or more different second proteins.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation (or therapeutically acceptable compositions) comprises the second protein at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation (or therapeutically acceptable compositions) has a pH that is about 0.5 pH units (e.g., above or below) or more from the isoelectric point (pI) of the second protein, wherein the formulation (or therapeutically acceptable compositions) has a reduced viscos
- the reference formulation or composition is one that includes the conjugate at the total molar amount and effectively does not include the second protein (or includes the second protein at less than 1% of the total molar amount), but is otherwise the same as the formulation or composition for which it serves as a reference. In some embodiments, the reference formulation or composition is a therapeutically acceptable reference composition.
- a low-viscosity formulation (or therapeutically acceptable compositions) of a protein conjugate comprising: a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation (or therapeutically acceptable compositions) has a pH that is about 0.5 pH units away (e.g., above or below) or more from the isoelectric point (pI) of the protein, wherein the formulation (or therapeutically acceptable compositions) has reduced viscosity and/or an enhanced injectability compared to a reference formulation (or reference composition) comprising the conjugate at a total molar amount that is the sum of the first and second molar amounts.
- the reference formulation or composition is one that includes the conjugate at the total molar amount and effectively does not include the second protein (or includes the second protein at less than 1% of the total molar amount), but is otherwise the same as the formulation or composition for which it serves as a reference.
- the reference formulation or composition is a therapeutically acceptable reference composition.
- the formulation (or therapeutically acceptable compositions) of the present disclosure can have any suitable viscosity.
- the formulation has a viscosity of, or of about 1000 mPas•s or less, e.g., about 900 mPas•s or less, about 800 mPas•s or less, about 700 mPas•s or less, about 600 mPas•s or less, about 500 mPas•s or less, about 400 mPas•s or less, about 300 mPas•s or less, about 200 mPas•s or less, about 100 mPas•s or less, or about 200 mPas•s or more, 300 mPas•s or more, about 400 mPas•s or more, about 500 mPas•s or more, about 600 mPas•s or more, about 700 mPas•s or more, about 800 mPas•s or more, about 900 mPas•s or more, or a viscosity in a range defined by
- the formulation has a viscosity of about 100 to about 300 mPas•s or about 200 to about 500 mPas•s. In some embodiments, the formulation has a viscosity of about 300 to about 400 mPas•s. The viscosity can be measured using any suitable option, e.g., a rotational rheometer such as a TA Instruments DHR-20. [0214] In some embodiments, the formulation (or therapeutically acceptable composition) has a viscosity that is reduced compared to a reference formulation having a molar amount of the conjugate that is the same as the total amount of the conjugate and unconjugated protein.
- the viscosity is reduced by about 10% or more, e.g., about 20% or more, about 30% or more, about 40% or more, about 50% or more, about 60% or more, about 70% or more, about 80% or more, about 90% or more, or by about 90% or less, about 80% or more, about 70% or less, about 60% or less, about 50% or less, about 40% or less, about 30 % or less, or by a percentage in a range defined by any two of the preceding values (e.g., by about 10-90%, by about 20-80%, by about 50-80%, by about 30- 70%, by about 40-90%, etc.). In some embodiments, the viscosity is reduced by about 50- 80%.
- the viscosity is reduced by about 70-80%.
- the reference formulation or composition (having the conjugate form only at the total molar amount) may include the conjugate (e.g., the polymer portion of the conjugate) at a sufficiently high molar amount to result in a formulation with high viscosity.
- the reference formulation has a viscosity of, or of about 700 mPas•s or more, e.g., about 800 mPas•s or more, about 900 mPas•s or more, about 1000 mPas•s or more, about 1000 mPas•s or more, or about 1500 mPas•s or less, about 1400 mPas•s or less, about 1300 mPas•s or less, about 1200 mPas•s or less, about 1100 mPas•s or less, about 1000 mPas•s or less, or a viscosity in a range defined by any two of the preceding values (e.g., about 700-1500 mPas•s, about 800-1300 mPas•s, about 900-1200, mPas•s, about 1000-1300 mPas•s, etc.).
- Formulations (or therapeutically acceptable compositions) of the present disclosure can have low turbidity (e.g., a visually clear solution).
- adding an unconjugated protein to a formulation of a conjugate results in a mixed formulation that is turbid (e.g., cloudy visual appearance).
- the turbidity of a formulation with a mixture of unconjugated and conjugated proteins is reduced when the pH of the formulation is not at or is not around (e.g., at least 0.5 pH units away from) the isoelectric point (pI) of the unconjugated protein.
- pI isoelectric point
- a low-turbidity formulation of a mixture of unconjugated and conjugated proteins is obtained when the pH of the formulation is different from (e.g., at least 0.5 pH units above or below) the pI of the unconjugated protein.
- a formulation (or therapeutically acceptable composition) comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the second protein is present in the formulation at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has a reduced turbidity compared to a reference formulation comprising the first molar amount of the conjugate and the second molar amount of the second protein at a
- the formulation has a reduced turbidity compared to a reference formulation comprising the first molar amount of the conjugate and the second molar amount of the second protein at a pH within 0.5 pH units of the pI of the second protein.
- the turbidity can be measured using any suitable option. For example, turbidity can be measured at OD 600 nm using a plate reader and calibrating the OD values against a suitable standard (e.g., a 4000 NTU Formazin calibration standard).
- the turbidity is reduced by about 10% or more, e.g., about 20% or more, about 30% or more, about 40% or more about 50% or more about 60% or more about 70% or more, about 80% or more, about 90% or more, or about 100%, or by a percentage in a range defined by any two of the preceding values (e.g., 10-100%, 10-50%, 30-70%, 50-100%, 80-100%, etc.).
- the formulation or therapeutically acceptable composition
- the formulation is substantially free of turbidity.
- the formulation is free of turbidity based on visual inspection.
- a formulation or composition that is substantially free of turbidity is free of turbidity based on visual inspection.
- the prepared formulation has a turbidity that, when expressed as NTU values as measured at OD 600 nm and calibrated against a 4000 NTU Formazin calibration standard, is (or corresponds to) about 500 Nephelometric Turbidity Units (NTU) or less, e.g., about 400 NTU or less, about 300 NTU or less, about 200 NTU or less, about 100 NTU or less, or about –50 NTU or more, about 0 NTU or more, about 100 NTU or more, about 200 NTU or more, about 300 NTU or more, about 400 NTU or more, or a turbidity measure in a range defined by any two of the preceding values (e.g., about -50-500 NTU, about 0-400 NTU, about 100-300 NTU, or about 50-400 NTU).
- NTU Nephelometric Turbidity Units
- the prepared formulation has a turbidity that, when expressed as NTU values as measured at OD 600 nm and calibrated against a 4000 NTU Formazin calibration standard, is (or corresponds to) about 300 NTU or less. In some embodiments, the prepared formulation has a turbidity that, when expressed as NTU values as measured at OD 600 nm and calibrated against a 4000 NTU Formazin calibration standard, is (or corresponds to) about 200 NTU or less. In some embodiments, the prepared formulation has a turbidity that, when expressed as NTU values as measured at OD 600 nm and calibrated against a 4000 NTU Formazin calibration standard, is (or corresponds to) about 100 NTU or less.
- the formulation or composition is free of turbidity based on visual inspection when the turbidity expressed as NTU values as measured at OD 600 nm and calibrated against a 4000 NTU Formazin calibration standard is, is about, or is at most 500, 450, 400, 350, 300, 250, 200, 150, 100, or 50 NTU.
- a pharmaceutical formulation that includes: a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine- containing polymer; a second molar amount the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the protein that is not conjugated to the phosphorylcholine-containing polymer at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and unconjugated proteins, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the formulation is substantially free of turbidity.
- a pharmaceutical formulation that includes: a first molar amount of a conjugate comprising a protein conjugated to a phospho
- a formulation that includes: a phosphorylcholine- containing polymer present in the formulation at about 100 mg/mL or higher; and a protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the protein is present in the formulation at a second molar amount, wherein the protein is present in the formulation at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the polymer and the protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein.
- a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein.
- the polymer is conjugated to a protein (e.g., an antibody, fusion construct, etc.).
- a formulation or therapeutically acceptable composition
- the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, wherein the formulation comprises the second protein at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the first protein and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the formulation comprises the second protein at about 1-90%, about 5-80%, about 10-95%, about 15-30%, about 5-50%, or about 10-40%, of the total molar amount of the conjugate and the second protein.
- the polymer is a phosphorylcholine-containing polymer.
- the formulation comprises the second protein at about 5-50%, or about 15-30% of the total molar amount of the conjugate and the second protein.
- the polymer is a phosphorylcholine-containing polymer.
- a formulation comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein a first molar amount of the conjugate and a second molar amount of the second protein has been combined in the formulation such that the second molar amount is about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the formulation is prepared by combining the first molar amount of the conjugate with the second molar amount of the second protein that is not conjugated to a polymer, such that the second molar amount is at the specified percentage of the sum of the first molar amount and the second molar amount (e.g., specified percentage of the total molar amount).
- the second molar amount is about 1-90%, about 5-90%, about 5-80%, about 10-95%, about 15-30%, about 5-50%, or about 10-40%, of the total molar amount of the conjugate and the second protein.
- the second molar amount is about 5-50% of the total molar amount of the conjugate and the second protein.
- the second molar amount is about 15-30% of the total molar amount of the conjugate and the second protein.
- the polymer is a phosphorylcholine-containing polymer.
- the formulation or composition has been prepared by combining the conjugate at a percent composition of about 1% or more (e.g., about 5-93%, 15-25%, 25-35%, 25-40%, etc.) of the second protein relative to the total protein mass weight concentration of the first protein and the second protein, where the remainder of the total protein mass weight concentration includes the first protein.
- the therapeutically acceptable composition can be prepared by combining an amount of the second protein that corresponds to 10 mg/mL in the final composition (at percent composition of 20%) with an amount of the conjugate that corresponds to 40 mg/mL of the first protein (as the conjugate, excluding any contribution of the polymer to the mass weight concentration calculation) in the final composition.
- the conjugate includes a first protein conjugated to a polymer, wherein the polymer includes one or more of: polyethylene glycol (PEG), branched PEG, PolyPEG® (Warwick Effect Polymers; Coventry, UK), polysialic acid (PSA), starch, hydroxylethyl starch (HES), hydroxyalkyl starch (HAS), carbohydrate, polysaccharides, pullulane, chitosan, hyaluronic acid, chondroitin sulfate, dermatan sulfate, dextran, carboxymethyl-dextran, polyalkylene oxide (PAO), polyalkylene glycol (PAG), polypropylene glycol (PPG), polyoxazoline, polyacryloylmorpholine, polyvinyl alcohol (PVA), polycarboxylate, polyvinylpyrrolidone, polyphosphazene, polyoxazoline, polyethylene-co-maleic acid anyhydride
- PEG polyethylene glycol
- a formulation comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer, wherein the polymer has 9 arms and a molecular weight of between 600,000 and 1,000,000 Da, wherein the polymer is present in the formulation at about 100 mg/mL or more; and a second protein that is not conjugated to a polymer, wherein the second protein is present in the formulation at about 5-15 mg/mL.
- the first and second proteins are a therapeutic protein.
- the first protein and second protein are the same (e.g., are at least, or at least about 85%, 90%, 95%, 97%, 98%, 99%, or are about 100% identical in amino acid sequence). In some embodiments, the first protein and second protein are different proteins.
- the phosphorylcholine-containing polymer is present in the formulation at about 100 mg/mL or more, e.g., about 150 mg/mL or more, about 200 mg/mL or more, about 250 mg/mL or more, about 300 mg/mL or more, about 350 mg/mL or more, about 400 mg/mL or more, about 450 mg/mL or more, or a concentration in range defined by any two of the preceding values (e.g., 100-450 mg/mL, 150-400 mg/mL, 200-400 mg/mL, 250-450 mg/mL, 300-450 mg/mL, etc.).
- the phosphorylcholine-containing polymer is present in the formulation at between about 150-400 mg/mL. In some embodiments, the phosphorylcholine-containing polymer is present in the formulation at between about 200-300 mg/mL.
- the polymer has a molecular weight of about 100,000 Da or more, e.g., about 150,000 Da or more, about 200,000 Da or more, about 350,000 Da or more, about 400,000 Da or more, about 450,000 Da or more, about 500,000 Da or more, about 550,000 Da or more, about 600,000 Da or more, about 650,000 Da or more, about 700,000 or more, about 750,000 Da or more, about 800,000 Da or more, about 850,000 Da or more, about 900,000 Da or more, about 950,000 Da or more, about 1,000,000 Da or more, or a molecular weight in a range defined by any two of the preceding values (e.g., 100,000-1,000,000 Da, 300,000-950,000 Da, 400,000-800,000 Da
- the polymer has a molecular weight in the range of about 700,000 to about 800,000 Da. In some embodiments, the polymer is any of the polymers disclosed herein. In some embodiments, the polymer is OG1801 or OG1802. [0228] In some embodiments, formulations (or therapeutically acceptable compositions) of the present disclosure (e.g., having a polymer or polymer-conjugated protein and unconjugated protein) have a pH that is different (e.g., higher or lower) from the pI of the unconjugated protein (e.g., protein that is not conjugated to a phosphorylcholine-containing polymer).
- the pH of the formulation is about 0.5 pH units away or more from the pI of the unconjugated protein (e.g., protein that is not conjugated to the phosphorylcholine-containing polymer). In some embodiments, the pH of the formulation is about 0.5 pH units away or more, e.g., about 0.6 pH units away or more, about 0.7 pH units away or more, about 0.8 pH units away or more, about 0.9 pH units away or more, about 1.0 pH units away or more, about 1.1 pH units away or more, about 1.2 pH units away or more, about 1.3 pH units away or more, about 1.4 pH units away or more, about 1.5 pH units away or more, about 1.6 pH units away or more, about 1.7 pH units away or more, about 1.8 pH units away or more, about 1.9 pH units away or more, about 2.0 pH units away or more, about 2.1 pH units away or more, about 2.2 pH units away or more, about 2.3 pH units away or more, about 2.4 pH units away or more, about 2.5 pH units
- the pH of the formulation is between about 2.0-3.0 pH units away from the pI of the unconjugated protein (e.g., protein that is not conjugated to the phosphorylcholine-containing polymer).
- formulations (or therapeutically acceptable compositions) of the present disclosure e.g., having a polymer or polymer-conjugated protein and unconjugated protein
- the pH of the formulation is about 0.5 pH units less or lower, e.g., about 0.6 pH units less or lower, about 0.7 pH units less or lower, about 0.8 pH units less or lower, about 0.9 pH units less or lower, about 1.0 pH units less or lower, about 1.1 pH units less or lower, about 1.2 pH units less or lower, about 1.3 pH units less or lower, about 1.4 pH units less or lower, about 1.5 pH units less or lower, about 1.6 pH units less or lower, about 1.7 pH units less or lower, about 1.8 pH units less or lower, about 1.9 pH units less or lower, about 2.0 pH units less or lower, about 2.1 pH units less or lower, about 2.2 pH units less or lower, about 2.3 pH units less or lower, about 2.4 pH units less or lower, about 2.5 pH units less or lower, about 2.6 pH units less or lower, about 2.7 pH units less or lower, about 2.8 pH units less or lower, about 2.9 pH units less or lower, about 3.0 pH units less or lower, about 3.2 pH units less or
- the pH of the formulation is between about 2.0-3.0 pH units lower than the pI of the unconjugated protein (e.g., protein that is not conjugated to the phosphorylcholine-containing polymer).
- formulations (or therapeutically acceptable compositions) of the present disclosure e.g., having a polymer or polymer-conjugated protein and unconjugated protein
- the pH of the formulation is about 0.5 pH units more or higher, e.g., about 0.6 pH units more or higher, about 0.7 pH units more or higher, about 0.8 pH units more or higher, about 0.9 pH units more or higher, about 1.0 pH units more or higher, about 1.1 pH units more or higher, about 1.2 pH units more or higher, about 1.3 pH units more or higher, about 1.4 pH units more or higher, about 1.5 pH units more or higher, about 1.6 pH units more or higher, about 1.7 pH units more or higher, about 1.8 pH units more or higher, about 1.9 pH units more or higher, about 2.0 pH units more or higher, about 2.1 pH units more or higher, about 2.2 pH units more or higher, about 2.3 pH units more or higher, about 2.4 pH units more or higher, about 2.5 pH units more or higher, about 2.6 pH units more or higher, about 2.7 pH units more or higher, about 2.8 pH units more or higher, about 2.9 pH units more or higher, about 3.0 pH units more or higher, about 3.2 pH units more or
- the pH of the formulation is between about 2.0-3.0 pH units greater than the pI of the unconjugated protein (e.g., protein that is not conjugated to the phosphorylcholine- containing polymer).
- the difference between the pH of a formulation (or therapeutically acceptable composition) containing a mixture of a polymer or polymer- conjugated protein and an unconjugated protein (e.g., protein that is not conjugated to a phosphorylcholine-containing polymer), as provided herein, and the pI of the unconjugated protein depends on the relative amounts (e.g., molar amounts) of the polymer/polymer- conjugate and the unconjugated protein in the formulation.
- the formulation can turn turbid.
- a formulation having a pH at about 4.0 or lower is substantially free of turbidity regardless of the concentration of polymer/polymer conjugate, or the concentration of the unconjugated protein.
- a formulation (or therapeutically acceptable composition) that includes: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the difference between the pI of the second protein and the pH of the formulation in the acidic or basic direction is selected to be greater than the minimum difference in the corresponding acidic or basic direction between the pI of the second protein and the pH for a reference formulation comprising: a third molar amount of the conjugate comprising the first protein conjugated to the phosphorylcholine-containing polymer; a fourth molar amount of the second protein that is not conjugated to the phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein a first total molar amount comprising a sum of the first molar amount and the second molar amount, and a
- the difference between the pI of the unconjugated protein and the pH of the formulation having a higher percentage of the total molar amount of the unconjugated protein (in either the acidic or basic direction) will generally be greater than the minimum difference between the pI of the unconjugated protein and the pH of the formulation having the lower percentage of the total molar amount of the unconjugated protein (in the corresponding acidic or basic direction) to maintain a clear formulation that is substantially free of turbidity.
- the pH of the formulation may be lower in the formulation having a higher proportion of unconjugated to conjugated protein if the pH is below the pI of the unconjugated protein, to maintain a clear solution.
- a formulation containing the unconjugated protein (having a pI of around 7.4) at about 5% of the total molar amount of unconjugated protein and conjugate, and at least about 200 mg/mL polymer, may be clear up to around pH 6, and another formulation having the unconjugated protein at 10% or 15% of the total molar amount, and at least about 200 mg/mL polymer, may be clear up to around pH 5, but turbid at around pH 6.
- the pH of the formulation and the reference formulation is each at least about 4.5 for this trend.
- the pH of the formulation is selected to be lower than the maximum pH for the reference formulation (e.g., for maintaining a clear formulation), wherein the pH of the formulation and a maximum pH for the reference formulation are lower than the pI of the second protein.
- the pH of the formulation is selected to be higher than a minimum pH for the reference formulation (e.g., for maintaining a clear formulation), wherein the pH of the formulation and the minimum pH for the reference formulation are higher than the pI of the second protein.
- the pH of the formulation and the reference formulation is each at most about 8.5 for this trend. In some embodiments, the pH of the formulation and the reference formulation is between about 4.5 and 8.5 for this trend.
- the concentration of the polymer component of the conjugate in the formulation and the reference formulation is each at least about 100 mg/mL (e.g., about 150 mg/mL, about 200 mg/mL, about 250 mg/mL, or about 300 mg/mL, or in a range of 150-300 mg/mL, e.g., 200- 300 mg/mL, or 250-300 mg/mL).
- the formulation can have any suitable pH.
- the pH of the formulation is about 3.0 or higher, about 3.5 or higher, about 4.0 or higher, about 4.5 or higher, about 5.0 or higher, about 5.5 or higher, about 6.0 or higher, about 6.5 or higher, about 7.0 or higher, about 7.5 or higher, about 8.0 or higher, about 8.5 or higher, about 9.0 or higher, about 9.5 or higher, about 10.0 or higher, or about 10.5 or higher, or about 12.0 or lower, about 11.5 or lower, about 11.0 or lower, about 10.5 or lower, about 10.0 or lower, about 9.5 or lower, about 9.0 or lower, about 8.5 or lower, about 8.0 or lower, about 7.5 or lower, about 7.0 or lower, about 6.5 or lower, about 6.0 or lower, about 5.5 or lower, about 5.0 or lower, about 4.5 or lower, about 4.0 or lower, or a pH in a range defined by any two of the preceding values (e.g., 3.0-12.0, 3.5-10.0, 4.0-6.0, 8-12, 5.0-
- the pH of the formulation is in the range of about pH 4 to about pH 5.5. In some embodiments, the pH of the formulation is in the range of about pH 4.5 to about pH 5.3. In some embodiments, the pH of the formulation is about 4.0, 4.1, 4.2, 4.3, 4.4, 4.5, 4.6, 4.7, 4.8, 4.9, 5.0, 5.1, 5.2, 5.3, 5.4, or about 5.5. In some embodiments, the pH of the formulation is about 5.0. In some embodiments, the pH of the formulation is about 4.5.
- the unconjugated protein (e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer) in the formulation has a pH of, or of about 4.0, 4.1, 4.2, 4.3, 4.4, 4.5, 4.6, 4.7, 4.8, 4.9, 5.0, 5.1, 5.2, 5.3, 5.4, 5.5, 5.6, 5.7, 5.8, 5.9, 6.0, 6.1, 6.2, 6.3, 6.4, 6.5, 6.6, 6.7, 6.8, 6.9, 7.0, 7.1, 7.2, 7.3, 7.4, 7.5, 7.6, 7.7, 7.8, 7.9, 8.0, 8.1, 8.2, 8.3, 8.4, 8.5, 8.6, 8.7, 8.7, 8.8, 8.9, 9.0, 9.1, 9.2, 9.3, 9.4, or about 9.5 or higher.
- the pI of the unconjugated protein (e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer) in the formulation is between about 4.0 and about 9.5, between about 5.0 and about 9.5, between about 5.5 and about 8.5, between about 6 and about 8.5, between about 7.0 and about 9.5, or between about 5.0 and about 8.0.
- the pI of the unconjugated protein (e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer) in the formulation is between about 7.0 and about 8.5
- the pH of the formulation is between about 4.0 and about 5.5
- the phosphorylcholine- containing polymer is present in the formulation (e.g., as a conjugate of the protein) at a concentration of between about 200 and about 300 mg/mL.
- the pI of the unconjugated protein (e.g., the protein that is not conjugated to a phosphorylcholine- containing polymer) in the formulation is between about 7.0 and about 8.5
- the pH of the formulation is between about 4.8 and about 5.2
- the phosphorylcholine-containing polymer is present in the formulation (e.g., as a conjugate of the protein) at a concentration of between about 200 and about 300 mg/mL.
- a formulation (or therapeutically acceptable composition, pharmaceutical composition, or therapeutic composition) provided herein is storage stable.
- a formulation (or therapeutically acceptable composition, pharmaceutical composition, or therapeutic composition) provided herein shows long-term stability (e.g., when stored under standard storage conditions).
- components of the formulation (the polymer/polymer conjugate and unconjugated protein) are soluble, and the formulation is a clear solution.
- a storage stable formulation remains substantially free of turbidity.
- the formulation is stable (e.g., clarity of the solution, structurally in terms of the protein and polymer components, and/or functionally with respect to the protein activity) after extended periods of time after being formulated at standard storage temperatures.
- the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) can be stored at any suitable temperature.
- the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) is stored at, at about, or at most at 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 30, 35, 40°C, or optionally it is stored at a temperature in a range defined by any two of the preceding values (e.g., 0-40°C, 0-10°C, 10- 20°C, 20-30°C, 30-40°C, etc.). In some embodiments, the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) is stored at a temperature in the range of 0-10°C.
- the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) is stored at a temperature in the range of 10-20°C. In some embodiments, the formulation (or therapeutic composition or therapeutically acceptable composition) is stored at or at about 5°C. In some embodiments, the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) is stored at or at about 25°C. In some embodiments, the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) is stored at room temperature. In some embodiments, the formulation (or therapeutically acceptable composition) is stored under ambient atmospheric pressure.
- the formulation (or therapeutic composition, pharmaceutical composition, or therapeutically acceptable composition) is stored at, at about, or at least at -5°C, -10°C, -15°C, -20°C, or -25°C.
- the formulation is stable when a measured feature of the formulation (e.g., turbidity, structural integrity and concentration of the protein and polymer components, activity of the protein) remains within at least about 20%, at least about 15%, at least about 10%, or at least about 5% of the originally measured level when the formulation was initially prepared.
- the formulation is stable when a measured feature of the formulation (e.g., turbidity, structural integrity and concentration of the protein and polymer components, activity of the protein) remains within at least about 20%, at least about 15%, at least about 10%, or at least about 5% of the originally measured level at an initial time point.
- the formulation (or therapeutically acceptable composition) is storage stable with respect to at least one of the following functional properties: turbidity, percent impurities, concentration of intact protein, concentration of intact polymer, activity of protein (e.g., inhibition of VEGF-A binding to VEGFR).
- impurities refer to product related impurities such as degraded, aggregated, unconjugated (e.g., where the product of interest is conjugated), or modified proteins.
- product unrelated impurities such as Host Cell Protein, endotoxin, Host cell DNA, are not considered “impurities” as defined herein.
- the formulation is stable (e.g., less than about 5% or about 10% total impurities, and/or IC 50 for competitive binding to VEGF bound to a VEGFR that is no more than about 10% or about 15% lower than a control formulation of the conjugate only) for at least about 1 month, at least about 2 months, at least about 3 months, at least about 4 months, at least about 5 months, at least about 6 months, at least about 9 months, at least about 12 months, at least about 16 months, at least about 20 months, at least about 24 months, at least about 36 months, at least about 48 months, or longer, or optionally, it is stable for a period of time in a range defined by any two of the preceding values (e.g., 1-48 months, 1-24 months, 1-12 months, 1-6 months, 3-9 months, 4-12 months, 12-24 months, 12-36 months, etc.), when stored at about 5°C.
- the preceding values e.g., 1-48 months, 1-24 months, 1-12 months, 1-6 months, 3-9 months,
- the formulation is stable (e.g., less than about 5% or about 10% total impurities, and/or IC50 for competitive binding to VEGF bound to a VEGFR that is no more than about 10% or about 15% lower than a control formulation of the conjugate only) for at least about 1 month, at least about 2 months, at least about 3 months, at least about 4 months, at least about 5 months, at least about 6 months, at least about 9 months, at least about 12 months, at least about 16 months, at least about 20 months, at least about 24 months, or longer, or optionally, it is stable for a period of time in a range defined by any two of the preceding values (e.g., 1-24 months, 1-20 months, 1-12 months, 1-6 months, 3-9 months, 4-12 months, 12-24 months, etc.), when stored at about 25°C.
- the preceding values e.g., 1-24 months, 1-20 months, 1-12 months, 1-6 months, 3-9 months, 4-12 months, 12-24 months, etc.
- the formulation is stable (e.g., less than about 5% or about 10% total impurities, and/or IC50 for competitive binding to VEGF bound to a VEGFR that is no more than about 10% or about 15% lower than a control formulation of the conjugate only) for at least about 1 month, at least about 2 months, at least about 3 months, at least about 4 months, at least about 5 months, at least about 6 months, at least about 9 months, at least about 12 months, at least about 16 months, at least about 20 months, at least about 24 months, at least about 36 months, or longer, or optionally, it is stable for a period of time in a range defined by any two of the preceding values (e.g., 1-12 months, 1-6 months, 3-9 months, 4-12 months, etc.), when stored at room temperature.
- the preceding values e.g., 1-12 months, 1-6 months, 3-9 months, 4-12 months, etc.
- the formulation is stable for, for about, or for at least 3 months when stored at about 5°C. In some embodiments, the formulation is stable for, for about, or for at least 6 months when stored at about 5°C. In some embodiments, the formulation is stable for, for about, or for at least 9 months when stored at about 5°C. In some embodiments, the formulation is stable for, for about, or for at least 12 months when stored at about 5°C. In some embodiments, the formulation is stable for, for about, or for at least 24 months when stored at about 5°C. In some embodiments, the formulation is stable for, for about, or for at least 3 months when stored at about 25°C.
- the formulation is stable for, for about, or for at least 6 months when stored at about 25°C. In some embodiments, the formulation is stable for, for about, or for at least 9 months when stored at about 25°C. In some embodiments, the formulation is stable for, for about, or for at least 12 months when stored at about 25°C.
- the formulation (or therapeutically acceptable composition) is storage stable with respect to at least one of the following measures: color and clarity by visual inspection; aggregation or degradation of the unconjugated protein and/or the conjugated protein at different temperature as measured by size exclusion chromatography (SEC-HPLC), ion-exchanger chromatography (IEX-HPLC), SEC with Multi-angle light scattering (MALS) detector, or a Tandem HPLC method that allows monitoring of the stability of either the conjugate or free protein population separately; potency; and maintenance of the percent unconjugated protein (e.g., percent composition or % of the total molar amount) in the formulation.
- SEC-HPLC size exclusion chromatography
- IEX-HPLC ion-exchanger chromatography
- MALS Multi-angle light scattering
- the formulation or composition comprises a mixture, by mass weight concentration, of 5% to 10% unconjugated protein (e.g. unconjugated antibody or unconjugated fusion construct) with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the amount of the unconjugated protein relative to the total amount of unconjugated and conjugated protein in the formulation is expressed as a percentage by mass weight concentration when the unconjugated protein and the protein portion of the conjugated protein has the same or similar (e.g., within about 10% of each other) molecular weight.
- the composition comprises a mixture, by mass weight concentration of 5% to 15% unconjugated protein (e.g. unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) of the same molecular weight, of which 15% to 25% unconjugated protein (e.g. unconjugated antibody) by mass weight concentration with the remainder comprising the conjugated protein.
- the composition comprises a mixture of two antibodies of the same molecular weight, of which 15-25% of unconjugated protein (e.g. unconjugated antibody) concentration in mass weight concentration (e.g.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 25% to 35% unconjugated protein (e.g. unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 35% to 45% unconjugated protein (e.g. unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 20% unconjugated protein (e.g.
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 25% unconjugated protein (e.g. unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 30% unconjugated protein (e.g. unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 35% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 40% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 50% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 55% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition or formulation comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 55% unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) with the remainder comprising the conjugated protein (e.g., the conjugated antibody or conjugated fusion construct).
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 60% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 65% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 70% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 75% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., two antibodies) by mass weight concentration of 5% to 80% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 85% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the composition comprises a mixture of the two proteins (e.g., antibodies and/or fusion constructs) by mass weight concentration of 5% to 90% unconjugated protein (e.g., unconjugated antibody) with the remainder comprising the conjugated protein.
- the percent of the conjugated to unconjugated protein (e.g., % total molar amount) is calculated by (1) measuring the conjugated protein and unconjugated protein in mg/mL; (2) converting the mg/mL values of the conjugated protein and unconjugated protein into a molecular weight measured in kDa; and (3) dividing the molecular weight of each of the conjugated protein and unconjugated protein by the total molecular weight of the conjugated protein and unconjugated protein in the composition, and multiplied by 100 to achieve a percent of the total molar amount for each.
- any of the formulations and compositions provided herein can be defined as a percent composition (e.g., in mass weight concentration) of one component relative to the total mass weight concentration of the proteins (e.g., excluding any contribution of a polymer that may be conjugated thereto) in the composition.
- a formulation or composition defined in % total molar amount of the second protein e.g., the unconjugated protein
- percent composition e.g., in mass weight concentration
- percent composition is measured in mass weight concentration (in other words, gram per liter or milligram per milliliter) of the free protein relative to the total mass weight concentration of the proteins (e.g., excluding any contribution of a polymer that may be conjugated thereto) in the mixture.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more (e.g., about 5-93%, 15-25%, 25-35%, 25-40%, etc.), wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more (e.g., about 5-93%, 15-25%, 25-35%, 25-40%, etc.), wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced viscosity and/or an enhanced injectability compared to a reference composition comprising the conjugate, wherein the first protein of the conjugate is present in the reference composition at the total mass weight concentration of the first and second proteins in the composition.
- a pharmaceutically acceptable carrier wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in
- the reference composition is one that includes the first protein of the conjugate at the total mass weight concentration and effectively does not include the second protein (or includes the second protein at a percent composition relative to the total mass weight concentration of the first protein and the second protein in the reference composition of less than 1%), but is otherwise the same as the composition for which it serves as a reference.
- a therapeutically acceptable composition comprising a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more (e.g., about 5-93%, 15-25%, 25-35%, 25-40%, etc.), wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced turbidity compared to a reference composition comprising the second protein at the percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the composition, at a pH about the same as (e.g., within 0.1, 0.15, 0.2, 0.3, 0.4, or 0.5 pH units of) the pI of the second
- the composition has a reduced turbidity compared to a reference composition comprising the second protein at the percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the composition.
- the reference composition includes the first protein conjugated to a phosphorylcholine-containing polymer and the second protein that is not conjugated to a phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the reference composition is the same as the percent composition of the second protein in the therapeutically acceptable composition, and the pH is about the same as (e.g., within 0.05, 0.1, 0.15, 0.2, 0.3, 0.4, or 0.5 pH units of) the pI of the second protein.
- the composition has a reduced turbidity compared to a reference composition comprising the second protein at the percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the composition.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the difference between the pI of the second protein and the pH of the formulation is selected to be greater than the minimum difference between the pI of the second protein and the pH for a reference formulation comprising: the conjugate comprising the first protein conjugated to the phosphorylcholine-containing polymer; the second protein that is not conjugated to the phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition in the composition is higher than
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.).
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein the second protein at a percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the composition of about 1% or more (e.g., about 5-93%, 15-25%, 25-35%, 25-40%, etc.) has been combined with the conjugate, wherein the remainder of the total protein mass weight concentration comprises the first protein.
- the composition has been prepared by combining the second protein at a percent composition of about 1% or more (e.g., about 5-93%, 15-25%, 25-35%, 25-40%, etc.) relative to the total protein mass weight concentration of the first protein and the second protein, with the conjugate such that the first protein at a percent composition of at a remainder of the total protein mass weight concentration.
- the therapeutically acceptable composition can be prepared by combining an amount of the second protein that corresponds to 10 mg/mL in the final composition (percent composition of 20%) with an amount of the conjugate that corresponds to 40 mg/mL of the first protein (as the conjugate, excluding any contribution of the polymer to the mass weight concentration calculation) in the final composition.
- the second protein that is not conjugated to a polymer can be referred to as the unconjugated protein
- the first protein that is conjugated to a polymer e.g., a phosphorylcholine- containing polymer
- the percent composition of the unconjugated protein (e.g., unconjugated antibody) relative to the total protein mass weight concentration of the first protein and the second protein in the composition is between 5% and 6%, with the remainder comprising the conjugated protein.
- the remainder denotes the portion of the total protein mass weight concentration of the composition (excluding any contribution of a polymer conjugated to the first protein to the mass weight concentration) that is not the unconjugated protein (e.g., the second protein), where the percent composition of the unconjugated protein (e.g., the second protein) and the remainder adds up to 100% of the total protein mass weight concentration.
- the percent composition of the unconjugated protein is between 5% and 6%, with the remainder comprising the conjugated protein, between 5% and 6% of the total mass weight concentration of the total protein concentration in the mixture is the unconjugated protein, and between 94% and 95% of the total mass weight concentration of the proteins in the mixture is the conjugated protein, where the percentages add up to 100%.
- the percent composition of the unconjugated protein e.g., unconjugated antibody
- the percent composition of the unconjugated protein is between 3% and 4%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 6% and 7%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 7% and 8%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 8% and 9%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 9% and 10%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 10% and 11%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 11% and 12%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12% and 13%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 13% and 14%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 14% and 15%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 16%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 16% and 17%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 17% and 18%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 18% and 19%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 19% and 20%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 20% and 21%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 21% and 22%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 22% and 23%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 23% and 24%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 24% and 25%.
- the percent composition of the unconjugated protein is between 25% and 26%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct). In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 26% and 27%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 27% and 28%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 28% and 29%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 29% and 30%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 30% and 31%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 31% and 32%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 32% and 33%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 33% and 34%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 34% and 35%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 35% and 36%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 36% and 37%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 37% and 38%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 38% and 39%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 39% and 40%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 40% and 41%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 41% and 42%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 42% and 43%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 43% and 44%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 44% and 45%. [0250] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or fusion construct) is between 45% and 46%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or unconjugated fusion construct). In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 46% and 47%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 47% and 48%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 48% and 49%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 49% and 50%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 50% and 51%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 51% and 52%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 52% and 53%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 53% and 54%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 54% and 55%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 55% and 56%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 56% and 57%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 57% and 58%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 58% and 59%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 59% and 60%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 60% and 61%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 61% and 62%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 62% and 63%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 63% and 64%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 64% and 65%. [0251] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is between 65% and 66%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugate fusion construct).
- the percent composition of the unconjugated protein is between 66% and 67%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 67% and 68%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 68% and 69%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 69% and 70%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 70% and 71%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 71% and 72%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 72% and 73%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 73% and 74%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 74% and 75%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 75% and 76%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 76% and 77%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 77% and 78%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 78% and 79%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 79% and 80%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 80% and 81%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 81% and 82%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 82% and 83%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 83% and 84%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 84% and 85%.
- the percent composition of the unconjugated protein is between 85% and 86%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct). In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 86% and 87%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 87% and 88%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 88% and 89%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 89% and 90%, with the remainder comprising the conjugated protein. [0253] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is between 5% and 25%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is between 1% and 5%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 12.5%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 15%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 17.5%.
- the percent composition of the unconjugated protein is between 5% and 20%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 25%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 30%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 35%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 5% and 45%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 50%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 55%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 60%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 5% and 65%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 70%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 75%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 80%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 5% and 85%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 5% and 90%. [0254] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is between 10% and 12.5%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is between 10% and 15%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 17.5%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 20%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 25%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 10% and 25%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 30%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 35%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 45%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 10% and 50%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 55%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 60%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 65%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 10% and 70%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 75%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 80%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 10% and 85%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 10% and 90%. [0255] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is between 12.5% and 15%, with the remainder comprising the conjugated protein (e.g., the conjugated antibody or conjugated fusion construct). In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 17.5%. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 17.5% and 22.5%.
- the percent composition of the unconjugated protein is between 12.5% and 20%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 25%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 30%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 35%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 12.5% and 45%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 50%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 55%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 60%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 12.5% and 65%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 70%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 75%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 80%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 12.5% and 85%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 12.5% and 90%. [0256] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is between 15% and 17.5%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or fusion construct).
- the percent composition of the unconjugated protein is between 15% and 20%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 25%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 30%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 35%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 15% and 45%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 50%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 55%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 60%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 15% and 65%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 70%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 75%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 80%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 15% and 85%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 15% and 90%. [0257] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is between 20% and 25%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or fusion construct).
- the percent composition of the unconjugated protein is between 25% and 30%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 35%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 45%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 50%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 25% and 55%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 60%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 65%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 70%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is between 25% and 75%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 80%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 85%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is between 25% and 90%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 1%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct). In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is 5%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct). In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 6%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 7%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 8%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 9%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 10%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 11%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 12%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 13%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 14%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 15%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 16%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 17%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 18%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 19%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 20%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 21%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 22%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 23%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 24%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 25%. [0259] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is 26%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is 27%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 28%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 29%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 30%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 31%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 32%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 33%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 34%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 35%.
- the percent composition of the unconjugated protein e.g., unconjugated antibody or unconjugated fusion construct
- the percent composition of the unconjugated protein is 36%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or fusion construct).
- the percent composition of the unconjugated protein is 37%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 38%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 39%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 40%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 41%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 42%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 43%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 44%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 45%. [0261] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is 46%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is 47%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 48%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 49%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 50%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 51%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 52%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 53%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 54%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 55%.
- the percent composition of the unconjugated protein e.g., unconjugated antibody or unconjugated fusion construct
- the percent composition of the unconjugated protein is 56%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is 57%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 58%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 59%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 60%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 51%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 62%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 63%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 64%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 65%. [0263] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjguated fusion construct) is 66%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is 67%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 68%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 69%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 70%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 11%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 72%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 73%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 74%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 75%.
- the percent composition of the unconjugated protein e.g., unconjugated antibody or unconjugated
- the percent composition of the unconjugated protein is 76%, with the remainder comprising the conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- the percent composition of the unconjugated protein is 77%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 78%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 79%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 80%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 81%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 82%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 83%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 84%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 85%. [0265] In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) is 86%, with the remainder comprising the conjugated protein.
- the percent composition of the unconjugated protein is 87%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 88%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 89%, with the remainder comprising the conjugated protein. In some embodiments, the percent composition of the unconjugated protein (e.g., unconjugated antibody) is 90%.
- the ratio of the molecular weight of the unconjugated protein (e.g., second protein that is not conjugated to a phosphorylcholine-containing polymer) to the polymer in the formulation can be any suitable ratio.
- the ratio is at most about 1:2, e.g., at most about 1:3, at most about 1:4, at most about 1:5, at most about 1:6, at most about 1:7, at most about 1:8, at most about 1:9 or at most about 1:10, or a ratio in a range defined by any two of the preceding values (e.g., 1:2-1:10, 1:3-1:8, 1:4-1:6).
- the ratio is between about 1:4 and 1:6.
- the protein conjugated to the phosphorylcholine-containing polymer and the unconjugated protein can each be any suitable protein.
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the second protein e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer
- have the same activity or function e.g., bind the same epitope, inhibit the same target, catalyze the same reaction, etc.
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the second protein e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the second protein e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer
- the first protein e.g., the protein conjugated to the phosphorylcholine- containing polymer
- the second protein e.g., the protein that is not conjugated to a phosphorylcholine-containing polymer
- the first protein and second proteins are at least about 85%, at least about 90%, at least about 95%, at least about 97%, at least about 98%, at least about 99%, or about 100%, or by a percentage in a range defined by any two of the preceding values (e.g., 85-100%, 90-99%, 90- 95%, etc.) identical to each other in amino acid sequence.
- the first and second proteins each include two or more polypeptide chains
- each of the corresponding polypeptide chains can independently have any of the noted sequence identity.
- the second protein is or comprises a derivative of the first protein (e.g., the protein portion without the polymer).
- the second protein is alkylated form of the first protein (e.g., the protein portion without the polymer).
- the second protein is an iodoacetamide (IAM)- or N-ethylmaleimide (NEM)-treated form of the first protein (e.g., the protein portion without the polymer).
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the first protein (e.g., the protein conjugated to the phosphorylcholine- containing polymer) has a molecular weight (based on the protein portion) of about 150 kDa. In some embodiments, the first protein (e.g., the protein conjugated to the phosphorylcholine- containing polymer) has a molecular weight of about 200 kDa.
- the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) has a molecular weight of about 50 kDa or more, e.g., about 75 kDa or more, about 100 kDa or more, about 125 kDa or more, about 150 kDa or more, about 175 kDa or more, about 200 kDa or more, about 250 kDa or more, about 300 kDa or more, or a molecular weight in a range defined by any two of the preceding values (e.g., 50- 300 kDa, 100-300 kDa, 100-200 kDa, 150-250 kDa, etc.).
- the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine- containing polymer) has a molecular weight of about 150 kDa. In some embodiments, the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) has a molecular weight of about 200 kDa.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is a therapeutic protein.
- at least one of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine- containing polymer) is a therapeutic protein that is FDA approved as of May 2023.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is an antibody (e.g., therapeutic antibody). Any suitable antibody can be used in the formulations.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is a fusion construct. Any suitable fusion construct can be used in the formulations.
- the antibody or fusion construct of any of the formulation or composition herein may or may not include a C-terminal lysine.
- Fusion protein and “fusion construct” are used interchangeably herein.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is an anti-VEGF-A antibody, a fusion construct comprising a VEGF Trap fused to the heavy chain of an anti-IL-6 antibody, an anti-IL-6 antibody, a fusion construct comprising a PDGFR extracellular trap fused to the heavy chain of an anti-VEGF-A antibody, a VEGF trap-Fc fusion protein, an anti-HTRA1 antibody, or an anti-complement factor D (CFD) antibody.
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) are an anti- VEGF-A antibody.
- both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) are a fusion construct comprising a VEGF Trap fused to the heavy chain of an anti-IL-6 antibody.
- the anti-VEGF-A antibody is a full-length antibody. In some embodiments, the anti-VEGF-A antibody is or includes an anti-VEGF-A Fab fragment. In some embodiments, the anti-VEGF-A antibody is OG1950, e.g., as described herein and in US patent publication no.2017/0190766, the entirety of which is incorporated herein by reference. In some embodiments, the anti-VEGF-A antibody is selected from bevacizumab, ranibizumab, brolucizumab, or faricimab. In some embodiments, the VEGF trap-Fc fusion protein is aflibercept.
- the fusion construct is OG2072, e.g., as described herein and in US patent publication no. 2019/0270806, the entirety of which is incorporated herein by reference.
- the first protein comprises any one of the amino sequences or a combination thereof set forth in Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs. 12-17, 54, 55A, and 55B.
- the second protein comprises any one of the amino sequences or a combination thereof set forth in Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs.12-17, 54, 55A, and 55B.
- the first protein comprises any one of the amino sequences or a combination thereof set forth in Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs.12-17, 54, 55A, and 55B
- the second protein comprises any one of the amino sequences or a combination thereof set forth in Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs.12-17, 54, 55A, and 55B.
- the first protein comprises any one of the amino sequences or a combination thereof set forth in SEQ ID NOs: 1-6, 15- 133, and 156-161.
- the first protein comprises any one of the amino sequences or a combination thereof set forth in SEQ ID NOs: 1-6, 15-133, and 156-161. In some embodiments, the first protein comprises any one of the amino sequences or a combination thereof set forth in SEQ ID NOs: 1-6, 15-133, and 156-161, and the second protein comprises any one of the amino sequences or a combination thereof set forth in SEQ ID NOs: 1-6, 15-133, and 156-161. In some embodiments, the amino acid sequences of the first protein and second protein are paired as they are arranged in Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs.12-17, 54, 55A, and 55B).
- the conjugated and unconjugated proteins are antibodies, and one or both antibodies are therapeutic.
- one or both antibodies are the same or variants of each other, wherein one antibody is conjugated to a polymer at a cysteine outside a variable region of the antibody and the other protein is unconjugated.
- both antibodies are therapeutic antibodies.
- at least one of the antibodies is a therapeutic antibody that is FDA approved as of May 2023.
- both antibodies are therapeutic for the treatment of an eye disorder.
- both antibodies (conjugated and unconjugated) share at least the same CDR sequences in the heavy and light chains.
- both antibodies have at least one (e.g., 1, 2, 3, 4, 5, or 6) CDR in the heavy or light chains that is different from each other.
- the composition comprises (a) an antibody conjugate comprising an anti-VEGF-A antibody and a phosphorylcholine-containing polymer wherein the polymer is covalently bonded to the antibody at a cysteine outside a variable region of the antibody; and (b) an unconjugated anti- VEGF-A antibody.
- the anti-VEGF-A antibody of the antibody conjugate comprises a light chain and a heavy chain, said heavy chain comprising an Fc region.
- a cysteine of the antibody conjugate is in the Fc region of the heavy chain.
- the anti-VEGF-A antibody of the antibody conjugate is an immunoglobulin G (IgG).
- the anti-VEGF-A antibody heavy chain of the antibody conjugate or the unconjugated antibody comprises: CDRH1: GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11), and the anti-VEGF-A light chain of the antibody conjugate or the unconjugated antibody comprises CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDR L 2: FTSSLHS (SEQ ID NO: 13), and CDR L 3: QQYSTVPWT (SEQ ID NO: 14).
- the anti-VEGFA heavy chain isotype of the antibody conjugate or the unconjugated antibody is human IgG1.
- the heavy chain constant domain of the anti-VEGF-A antibody of the antibody conjugate or the unconjugated antibody has one or more mutations relative to the constant domain of human IgG1 to modulate effector function.
- mutations of the antibody conjugate (and/or unconjugated antibody) may be to one or more of the following amino acid positions (EU numbering): E233X, L234X, L235X, G236X, G237X, A327X, A330X, and P331X wherein X is any natural or unnatural amino acid.
- mutations of the antibody conjugate (and/or unconjugated antibody) are selected from the group consisting of (EU numbering): E233P, L234V, L234A, L235A, G237A, A327G, A330S, and P331S.
- mutations of the antibody conjugate (and/or unconjugated antibody) comprise: L234A, L235A, and G237A (EU numbering).
- the cysteine of the antibody conjugate (and/or unconjugated antibody) is in the anti-VEGF-A antibody heavy chain and is Q347C (EU numbering) or L443C (EU numbering).
- sequence of the anti-VEGF-A antibody heavy chain of the antibody conjugate or the unconjugated antibody is SEQ ID NO: 1 (with or without the C-terminal lysine) and the sequence of the anti-VEGF-A light chain of the antibody conjugate or the unconjugated antibody is SEQ ID NO: 2.
- the sequence of the anti-VEGF-A antibody heavy chain of the antibody conjugate or the unconjugated antibody is at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO: 1, and the sequence of the anti-VEGF-A light chain of the antibody conjugate or the unconjugated antibody is at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO: 2.
- the cysteine of the antibody conjugate or the unconjugated antibody is L443C (EU numbering).
- the solution pH of the composition depends on the isoelectric point of a desired protein, wherein the solution pH is at least 1-2 pH units away from the desired protein’s isoelectric point.
- a composition comprising a first antibody and a second antibody is provided. The first antibody is conjugated to a phosphorylcholine- containing polymer, wherein the polymer is covalently bonded to the first antibody at a cysteine outside a variable region of the first antibody; wherein the second antibody is not conjugated to the phosphorylcholine-containing polymer.
- the first antibody comprises CDRH1: GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDR H 3: YPYYYGTSHWYFDV (SEQ ID NO: 11), CDR L 1: SASQDISNYLN (SEQ ID NO: 12), CDR L 2: FTSSLHS (SEQ ID NO: 13), and CDR L 3: QQYSTVPWT (SEQ ID NO: 14).
- mutations of the first antibody are to one or more of the following amino acid positions (EU numbering): E233X, L234X, L235X, G236X, G237X, A327X, A330X, and P331X wherein X is any natural or unnatural amino acid.
- mutations of the first antibody are selected from the group consisting of (EU numbering): E233P, L234V, L234A, L235A, G237A, A327G, A330S, and P331S.
- the following mutations of the first antibody L234A, L235A, and G237A (EU numbering).
- the cysteine of the first antibody is in the anti-VEGF-A antibody heavy chain and is Q347C (EU numbering) or L443C (EU numbering).
- the sequence of the anti-VEGF-A antibody heavy chain of the first antibody is SEQ ID NO: 1 (with or without the C-terminal lysine) and the sequence of the anti-VEGF-A light chain of the first antibody is SEQ ID NO: 2. Any or all the foregoing embodiments in this paragraph could apply to the second antibody.
- OG1950 denotes an anti-VEGF-A antibody having a heavy chain of SEQ ID NO:1 (with or without the C-terminal lysine) and a light chain of SEQ ID NO: 2.
- the cysteine of the first antibody is L443C (EU numbering).
- the first and second antibody have the same CDRs (1, 2, 3, 4, 5, or all 6), same VH, VL, same VH and same VL, and/or same HC and LC, with the only difference being one is conjugated to a polymer and one is not conjugated to the polymer.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is an anti-complement factor D (CFD) antibody.
- the anti-CFD antibody includes a heavy chain having any 3 of the heavy chain CDRs in any one of SEQ ID NOs: 15-47, and a light chain having any 3 of the light chain CDRs in any one of SEQ ID NOs: 48-80.
- the anti-CFD antibody includes a heavy chain having any 3 of the heavy chain CDRs in any one of SEQ ID NOs: 15-47, and a light chain having any 3 of the light chain CDRs in any one of SEQ ID NOs: 48-80, as they are paired in Table 0.1.
- the anti-CFD antibody includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 15-47, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 48-80.
- the anti-CFD antibody includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90- 97%, etc.) identical to any one of SEQ ID NOs: 15-47, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 48-80, as they are paired in Table 0.1.
- the anti-CFD antibody includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO: 129 (or a heavy chain variable region thereof), and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO: 130 (or a light chain variable region thereof).
- the anti-CFD antibody heavy chain includes the sequence of SEQ ID NO: 129 (with or without the C-terminal lysine).
- the CFD antibody light chain can comprise the sequence of SEQ ID NO: 130.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is an anti-IL-6 antibody.
- the anti-IL-6 antibody includes a heavy chain having any 3 of the heavy chain CDRs in any one of SEQ ID NOs: 81-89, and a light chain having any 3 of the light chain CDRs in any one of ID NOs: 90-92.
- the anti-IL-6 antibody includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 81-89, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 90-92.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is a fusion construct comprising a VEGF Trap fused to the heavy chain of an anti- IL-6 antibody.
- the fusion construct includes a heavy chain variable region having any 3 of the heavy chain CDRs (or all 3 heavy chain CDRs) in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain variable region having any 3 of the light chain CDRs (or all 3 light chain CDRs) in any one of ID NOs: 94, 96, 98, 100, 102, 104, 106, 108, 110, 112, 114, 116, 118, 120, 122, 124, 126, and 128.
- the fusion construct includes a heavy chain variable region having any 3 of the heavy chain CDRs (or all 3 heavy chain CDRs) in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain variable region having any 3 of the light chain CDRs (or all 3 light chain CDRs) in any one of SEQ ID NOs: 94, 96, 98, 100, 102, 104, 106, 108, 110, 112, 114, 116, 118, 120, 122, 124, 126, and 128, as they are paired in Table 0.4.
- the fusion construct includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to a heavy chain variable region in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.)
- the fusion construct includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to a heavy chain variable region in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80- 100%, 85-95%, 90-97%, etc.)
- the fusion construct includes a heavy chain having any 3 of the heavy chain CDRs in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain having any 3 of the light chain CDRs in any one of ID NOs: 94, 96, 98, 100, 102, 104, 106, 108, 110, 112, 114, 116, 118, 120, 122, 124, 126, and 128.
- the fusion construct includes a heavy chain having any 3 of the heavy chain CDRs in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain having any 3 of the light chain CDRs in any one of SEQ ID NOs: 94, 96, 98, 100, 102, 104, 106, 108, 110, 112, 114, 116, 118, 120, 122, 124, 126, and 128, as they are paired in Table 0.4.
- the fusion construct includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90- 97%, etc.) identical to any one of SEQ ID NOs
- the fusion construct includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90- 97%, etc.) identical to any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs
- the fusion construct includes: a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to a heavy chain variable region in any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127, and heavy chain CDRs of the 3 heavy chain CDRs in the any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127; and a light chain variable region having an amino acid sequence at least
- the fusion construct includes a heavy chain having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80- 100%, 85-95%, 90-97%, etc.) identical to any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127 (each with or without the C- terminal lysine), and a light chain having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90- 97%
- the fusion construct includes a heavy chain having an amino acid sequence of any one of SEQ ID NOs: 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 119, 121, 123, 125, and 127 (each with or without the C-terminal lysine), and a light chain having an amino acid sequence of any one of SEQ ID NOs: 94, 96, 98, 100, 102, 104, 106, 108, 110, 112, 114, 116, 118, 120, 122, 124, 126, and 128, as they are paired in Table 0.4.
- the VEGF Trap comprises human VEGFR1 domain 2 and human VEGFR2 domain 3.
- the VEGF Trap includes the amino acid sequence of SEQ ID NO:133.
- the VEGF Trap comprises an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO:133.
- a fusion construct includes a heavy chain that includes a CDRH1 that is the CDRH1 in SEQ ID NO: 105; a CDRH2 that is the CDRH2 in SEQ ID NO: 105; a CDRH3 that is the CDRH3 in SEQ ID NO: 105; a CDRL1 that is the CDRL1 in SEQ ID NO: 106; a CDRL2 that is the CDRL2 in SEQ ID NO: 106; and a CDRL3 that is the CDR L 3 in SEQ ID NO: 106.
- the fusion construct includes a heavy chain comprising a complementarity determining region 1 (CDR H 1): PFAMH (SEQ ID NO: 134), CDR H 2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDR H 3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDR L 1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDRL3: QQWSGYPYT (SEQ ID NO: 139).
- CDR H 1 complementarity determining region 1
- PFAMH SEQ ID NO: 134
- CDR H 2 KISPGGSWTYYSDTVTD
- CDR H 3 QAWGYYALDI
- the heavy chain comprises an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90- 97%, etc.) identical to SEQ ID NO:105, and the light chain comprises an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80- 100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO:106.
- the heavy chain comprises the amino acid sequence of SEQ ID NO:105 (with or without the C-terminal lysine), and the light chain comprises the amino acid sequence of SEQ ID NO:106.
- OG2072 denotes a fusion construct that includes an anti-IL-6 antibody fused to a VEGF trap, and that includes a heavy chain of SEQ ID NO:105 (with or without the C-terminal lysine) and a light chain of SEQ ID NO:106.
- one or both of the first protein (e.g., the protein conjugated to the phosphorylcholine-containing polymer) and the second protein (e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer) is a fusion construct comprising a PDGFR extracellular trap fused to the heavy chain of an anti-VEGF-A antibody.
- the fusion construct includes a heavy chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO: 131, and a light chain variable region having an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to SEQ ID NO: 132.
- the heavy chain comprises the amino acid sequence of SEQ ID NO:131 (with or without the C-terminal lysine), and the light chain comprises the amino acid sequence of SEQ ID NO:132.
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the second protein e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer
- the anti-HTRA1 antibody includes a heavy chain comprising a complementarity determining region 1 CDRH1: FYHVH (SEQ ID NO: SEQ ID NO:140), CDRH2: SIYTSGYTEYASALES (SEQ ID NO:141), and CDRH3: EGLQRVGVLDA (SEQ ID NO:142) or EGLQRVGVFDA (SEQ ID NO:143) or EGLQRVGVMDA (SEQ ID NO:144), and a light chain comprising a CDRL1: RSSQSLLDEAGETYLA (SEQ ID NO:145), CDR L 2: EVSLLES (SEQ ID NO:146), and CDR L 3: QQATYFPYT (SEQ ID NO:147).
- CDRH1 FYHVH
- CDRH2 SIYTSGYTEYASALES
- CDRH3 EGLQRVGVLDA
- EGLQRVGVFDA SEQ ID NO:143
- EGLQRVGVMDA SEQ ID NO
- the anti-HTRA1 antibody includes a heavy chain comprising a complementarity determining region 1 CDR H 1: GFSLTFYH (SEQ ID NO: SEQ ID NO:148), CDR H 2: IYTSGYT (SEQ ID NO:149), and CDRH3: AREGLQRVGVFDA (SEQ ID NO:150) or AREGLQRVGVMDA (SEQ ID NO:151) or AREGLQRVGVLDA (SEQ ID NO:152), and a light chain comprising a CDRL1: QSLLDEAGETY (SEQ ID NO:153), CDRL2: EV, and CDRL3: QQATYFPYT (SEQ ID NO:147).
- CDR H 1 GFSLTFYH
- CDR H 2 IYTSGYT
- CDRH3 AREGLQRVGVFDA
- AREGLQRVGVMDA SEQ ID NO:151
- AREGLQRVGVLDA SEQ ID NO:152
- a light chain compris
- the anti-HTRA1 antibody includes a heavy chain comprising a complementarity determining region 1 CDR H 1: GFSLTFY (SEQ ID NO: SEQ ID NO:154), CDR H 2: YTSGY (SEQ ID NO:155), and CDR H 3: EGLQRVGVLDA (SEQ ID NO:142) or EGLQRVGVFDA (SEQ ID NO:143) or EGLQRVGVMDA (SEQ ID NO:144), and a light chain comprising a CDR L 1: RSSQSLLDEAGETYLA (SEQ ID NO:145), CDR L 2: EVSLLES (SEQ ID NO:146), and CDRL3: QQATYFPYT (SEQ ID NO:147).
- CDR H 1 GFSLTFY
- CDR H 2 YTSGY
- CDR H 3 EGLQRVGVLDA
- EGLQRVGVFDA SEQ ID NO:143
- EGLQRVGVMDA SEQ ID NO:144
- the heavy chain comprises an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to any one of the VH sequences set forth in Table 0.6
- the light chain comprises an amino acid sequence at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 98%, at least 99%, or about 100%, or a percentage in a range defined by any two of the preceding values (e.g., 80-100%, 85-95%, 90-97%, etc.) identical to the VL sequence set forth in Table 0.7.
- the heavy chain comprises any one of the VH sequences set forth in Table 0.6
- the light chain comprises the VL sequence set forth in Table 0.7.
- the unconjugated protein e.g., unconjugated antibody or unconjugated fusion construct
- the unconjugated species within the composition is separate from the conjugated species by the fact that the conjugated species was subjected to a conjugation reaction and then unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) was then added to the mix to create the composition.
- the unconjugated protein does not have a non-native cysteine that can be conjugated to a polymer.
- the conjugate includes a polymer conjugated to a cysteine, or free amino groups of the protein, e.g., using N-hydroxysuccinimide (NHS) esters.
- the conjugate includes a polymer conjugated to ⁇ -amine group of lysines, ⁇ -amine group of N-terminal amino acids, and/or ⁇ -amine group of histidines.
- the formulation or therapeutically acceptable composition comprises KSI-301.
- KSI-301 comprises OG1950 and its conjugated form with OG1802, OG1953.
- OG1950 denotes an anti-VEGF-A antibody having a heavy chain of SEQ ID NO:1 (with or without the C-terminal lysine) and a light chain of SEQ ID NO: 2.
- OG1802 may be bonded to the heavy chain of OG1950 at C443 (EU numbering) to form OG1953.
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the second protein e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer
- OG1950 conjugated with OG1802 (to form OG1953)
- the second protein e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer
- the formulation or therapeutically acceptable composition comprises about 40 to about 60 mM sodium acetate, about 0.01% to about 0.04% polysorbate 20, about 40 to about 60 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 15% to about 25% OG1950 and about 75% to about 85% OG1953 (e.g., by molar amount or percent composition by total protein mass weight concentration), at pH about 4.5 to about 5.5.
- the formulation or therapeutically acceptable composition comprises about 50 mM sodium acetate, about 0.025% polysorbate 20, about 50 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 20% OG1950 and about 80% OG1953 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5.
- the formulation or therapeutically acceptable composition consists of, or consists essentially of, about 50 mM sodium acetate, about 0.025% polysorbate 20, about 50 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 20% OG1950 and about 80% OG1953 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5.
- the second protein is or comprises OG1950IAM (e.g., OG1950 treated with iodoacetamide).
- the formulation or therapeutically acceptable composition comprises KSI-501.
- KSI-501 comprises fusion protein OG2072 and its conjugated form with OG1802, OG2074.
- OG2072 denotes a fusion construct that includes an anti-IL-6 antibody fused to a VEGF trap, and that includes a heavy chain of SEQ ID NO:105 (with or without the C-terminal lysine) and a light chain of SEQ ID NO:106.
- OG1802 may be bonded to the heavy chain of OG2072 at C443 (EU numbering) to form OG2074.
- the first protein e.g., the protein conjugated to the phosphorylcholine-containing polymer
- the second protein e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer
- OG2072 e.g., the unconjugated protein or protein that is not conjugated to a phosphorylcholine-containing polymer
- the formulation or therapeutically acceptable composition comprises about 50 to about 60 mM sodium acetate, polysorbate 20 (e.g., 0.025% polysorbate 20), sucrose (e.g., 4% sucrose), about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 20-40% OG2072 and 60-80% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at pH about 4.5 to about 5.5.
- polysorbate 20 e.g. 0.025% polysorbate 20
- sucrose e.g., 4% sucrose
- total protein concentration total protein concentration
- the formulation or therapeutically acceptable composition comprises about 50 to about 60 mM sodium acetate, about 0.025% polysorbate 20, about 4% sucrose, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5 (e.g., about pH 4.8 to about pH 5).
- the formulation or therapeutically acceptable composition consists of, or consists essentially of, about 50 to about 60 mM mM sodium acetate, about 0.025% polysorbate 20, about 4% sucrose, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5 (e.g., about pH 4.8 to about pH 5).
- the formulation or therapeutically acceptable composition comprises about 50 mM sodium acetate, about 0.025% polysorbate 20, about 4% sucrose, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5.
- the formulation or therapeutically acceptable composition consists of, or consists essentially of, about 50 mM sodium acetate, about 0.025% polysorbate 20, about 4% sucrose, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5.
- the formulation or therapeutically acceptable composition does not include sucrose.
- the formulation or therapeutically acceptable composition does not include a sugar.
- the formulation or therapeutically acceptable composition comprises about 50 to about 60 mM sodium acetate, about 0.025% polysorbate 20, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5 (e.g., about pH 4.8 to about pH 5), optionally where the formulation or therapeutically acceptable composition does not include sucrose.
- the formulation or therapeutically acceptable composition consists of, or consists essentially of, 50-60 mM sodium acetate, about 0.025% polysorbate 20, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5 (e.g., about pH 4.8 to about pH 5), optionally where the formulation or therapeutically acceptable composition does not include sucrose.
- the formulation or therapeutically acceptable composition includes a histidine acetate buffer, about 0.025% polysorbate 20, about 4% sucrose, about 50 mg/mL (total protein concentration) of a mixture of OG2072 and OG2074, the mixture containing 30% OG2072 and 70% OG2074 (e.g., by molar amount or percent composition by total protein mass weight concentration), at about pH 5.2 to about pH 6.2.
- FIGs. 58B and 58C depict components of a non-limiting examples of a formulation of the present disclosure, that can include, among other components, a mixture of a fusion construct and a fusion construct conjugate, as described herein.
- the polymer component of the conjugated protein has a molecular weight of about 100,000 Da or more, e.g., about 150,000 Da or more, about 200,000 Da or more, about 350,000 Da or more, about 400,000 Da or more, about 450,000 Da or more, about 500,000 Da or more, about 550,000 Da or more, about 600,000 Da or more, about 650,000 Da or more, about 700,000 or more, about 750,000 Da or more, about 800,000 Da or more, about 850,000 Da or more, about 900,000 Da or more, about 950,000 Da or more, about 1,000,000 Da or more, or a molecular weight in a range defined by any two of the preceding values (e.g., 100,000-1,000,000 Da, 300,000-950,000 Da, 400,000-800,000 Da, 500,000-750.000 Da, 600,000-700,000 Da, 600,000-1,000,000 Da, etc.).
- the polymer has a molecular weight of between about 700,000 to about 800,000 Da.
- the polymer component of the conjugated protein is any of the polymers disclosed herein.
- the polymer component of the conjugated protein is OG1801.
- the phosphorylcholine-containing polymer of the conjugate comprises 2-(methacryloyloxyethyl)-2’-(trimethylammonium)ethyl phosphate (MPC) monomers as set forth below: [0294]
- the polymer of the conjugate has three or more arms or is synthesized with an initiator comprising 3 or more polymer initiation sites.
- the polymer of the conjugate has 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 arms or is synthesized with an initiator comprising 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 polymer initiation sites. In some embodiments, the polymer of the conjugate has 9 arms or is synthesized with an initiator comprising 9 polymer initiation sites. In some embodiments, the polymer of the conjugate has a polydispersity value (PDI) of less than about 1.2. [0295] In some embodiments, the polymer of the first protein that is conjugated (e.g., first antibody and/or conjugated antibody) has three or more arms or is synthesized with an initiator comprising 3 or more polymer initiation sites.
- PDI polydispersity value
- the polymer of the first protein that is conjugated has 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 arms or is synthesized with an initiator comprising 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 polymer initiation sites.
- the polymer of the first antibody has a polydispersity index (PDI) of less than about 1.2.
- the polymer comprises MPC monomers, wherein first antibody comprises: an amino acid sequence of SEQ ID NO: 1 (with or without the C- terminal lysine); an amino acid sequence of SEQ ID NO: 2, and wherein the antibody is bonded at C449 in SEQ ID NO: 1 to the polymer.
- the polymer has 9 arms, and wherein the polymer has a molecular weight of between about 600,000 to about 900,000 Da.
- the first protein or the conjugated protein e.g., the antibody conjugated to the polymer
- the first protein or the conjugated protein is an antibody or a fusion construct, and has the following structure: wherein each heavy chain of the antibody or fusion construct is denoted by the letter H, and each light chain of the antibody or fusion construct is denoted by the letter L; the polymer is bonded to the antibody or fusion construct through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains; PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any halogen, including –Br, –C
- the sum of n1, n2, n3, n4, n5, n6, n7, n8 and n9 is about 1500 to about 3500 plus or minus about 10% to about 20%.
- the first protein or the conjugated protein e.g., the antibody conjugated to the polymer
- the first protein or the conjugated protein is an antibody or a fusion construct, and has the following structure: wherein each heavy chain of the antibody or fusion construct is denoted by the letter H, and each light chain of the antibody or fusion construct is denoted by the letter L; the polymer is bonded to the antibody or fusion construct through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains; PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any
- the second (and/or the unconjugated) antibody comprises: a CDRH1 that is the CDRH1 in SEQ ID NO: 1; a CDRH2 that is the CDRH2 in SEQ ID NO: 1; a CDRH3 that is the CDRH3 in SEQ ID NO: 1; a CDRL1 that is the CDRL1 in SEQ ID NO: 2; a CDRL2 that is the CDRL2 in SEQ ID NO: 2; a CDRL3 that is the CDRL3 in SEQ ID NO: 2; at least one of the following mutations (EU numbering): L234A, L235A, and G237A; and at least one of the following mutations (EU numbering): Q347C or L443C.
- Formulations and compositions provided herein can include a suitable pharmaceutically acceptable carrier.
- the pharmaceutically acceptable carrier includes water or a buffer.
- the pharmaceutically acceptable carrier comprises a buffer comprising a buffering agent having a pKa that is within, or within about 2, 1, or 0.5 pH units of the pH of the formulation.
- the formulation includes as a pharmaceutically acceptable carrier a buffer selected from: acetate, phosphate, citrate, glycine, histidine, HEPES, and Tris buffers.
- the formulation includes a sodium acetate buffer.
- the formulation includes, includes about, or includes at least 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 90, 100 mM or more sodium acetate, or optionally, the formulation includes sodium acetate at a concentration in a range defined by any two of the preceding values (e.g., 10-100 mM, 30-80 mM, 40-60 mM, 40-70 mM, etc.). In some embodiments, the formulation includes sodium acetate at a concentration in a range of 40-60 mM. In some embodiments, the formulation includes sodium acetate at a concentration in a range of 30-80 mM. In some embodiments, the formulation includes a histidine acetate buffer.
- the formulation includes, includes about, or includes at least 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 90, 100 mM or more histidine acetate, or optionally, the formulation includes histidine acetate at a concentration in a range defined by any two of the preceding values (e.g., 5-100 mM, 20-80 mM, 10-60 mM, 15-70 mM, 10-30 mM, 15-25 mM, etc.). In some embodiments, the formulation includes histidine acetate at a concentration in a range of 10-60 mM. In some embodiments, the formulation includes histidine acetate at a concentration in a range of 10-30 mM.
- the formulation includes histidine acetate at a concentration in a range of 15-25 mM.
- the composition or formulation includes a surfactant, such as but not limited to a polysorbate (e.g., polysorbate 20).
- the composition or formulation can include any suitable amount of the surfactant.
- the composition or formulation includes, includes about, or includes at least 0.005, 0.01, 0.015, 0.02, 0.025, 0.03, 0.035, 0.04, 0.05, 0.0.6, 0.07, 0.08, 0.09, 0.1% (w/w) or more of the surfactant, or optionally, the composition or formulation includes a percentage (w/w) of the surfactant in a range defined by any two of the preceding values (e.g., 0.005-0.1%, 0.01-0.05%, 0.02-0.03%, 0.015-0.08%, etc.). In some embodiments, the composition or formulation includes the surfactant at about 0.01% to about 0.04% (w/w).
- the composition or formulation includes the surfactant at about 0.02% to about 0.03% (w/w). In some embodiments, the composition or formulation includes about 0.025% (w/w) surfactant. In some embodiments, the surfactant is or comprises polysorbate 20 or polysorbate 80 or poloxamer 188. In some embodiments, the surfactant is polysorbate 20. In some embodiments, the composition or formulation includes about 0.01- 0.05% (w/w) polysorbate 20. In some embodiments, the composition or formulation includes about 0.02-0.03% (w/w) polysorbate 20. In some embodiments, the composition or formulation includes about 0.025% (w/w) polysorbate 20. In some embodiments, the surfactant is poloxamer 188.
- the composition or formulation includes a tonicity agent.
- the tonicity agent is or includes a sugar.
- the tonicity agent is or includes sucrose or trehalose.
- the composition or formulation can include any suitable amount of the tonicity agent.
- the composition or formulation includes, includes about, or includes at least 2.0%, 2.5%, 3.0%, 3.5%, 4.0%, 4.5%, 5.0%, 5.5%, 6.0%, 6.5%, 7.5%, 8.0%, 8.5%, 9.0%, 10.0% (w/v) or more of the tonicity agent, or optionally, the composition or formulation includes a percentage (w/v) of the tonicity agent in a range defined by any two of the preceding values (e.g., 2-10%, 2.5-6%, 3-5%, 3.5-8.5%, etc.). In some embodiments, the composition or formulation includes the tonicity agent at about 2% to about 10% (w/v). some embodiments, the composition or formulation includes the tonicity agent at about 3% to about 5% (w/v).
- the composition or formulation includes about 4% (w/v) tonicity agent. In some embodiments, the composition or formulation includes about 2% to about 10% (w/v) sucrose. In some embodiments, the composition or formulation includes about 3% to about 5% (w/v) sucrose. In some embodiments, the composition or formulation includes about 4% (w/v) sucrose.
- an intraocular therapeutic composition comprising an anti- VEGF-A antibody at about 50 mg/mL of protein, the anti-VEGF-A antibody comprising: a heavy chain comprising a complementarity determining region 1 (CDRH1): GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11); and a light chain comprising CDR L 1: SASQDISNYLN (SEQ ID NO: 12), CDR L 2: FTSSLHS (SEQ ID NO: 13), and CDR L 3: QQYSTVPWT (SEQ ID NO: 14), wherein the anti-VEGF-A antibody is present in the composition as either an antibody conjugate or unconjugated antibody, wherein the unconjugated antibody is present in the formulation at between about 10% to about 30% of a total molar amount of the antibody
- an intraocular therapeutic composition comprising an anti-VEGF-A antibody at about 50 mg/mL of protein, the anti-VEGF-A antibody comprising: a heavy chain comprising an amino acid sequence of SEQ ID NO: 1 (with or without the C- terminal lysine); and a light chain comprising an amino acid sequence of SEQ ID NO: 2, wherein the anti-VEGF-A antibody is present in the composition as either an antibody conjugate or unconjugated antibody, wherein the unconjugated antibody is present in the formulation at between about 10% to about 30% of a total molar amount of the antibody conjugate and the unconjugated antibody, wherein the total molar amount is the sum of the molar amount of the antibody conjugate and the molar amount of the unconjugated antibody, wherein the antibody conjugate comprises the following structure: wherein: each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is
- an intraocular therapeutic composition comprising a fusion construct at about 53 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising an amino acid sequence of SEQ ID NO:105 (with or without the C-terminal lysine), and a light chain comprising an amino acid sequence of SEQ ID NO:106, wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to about 40% of a total molar amount of the conjugate and the unconjugated fusion construct, wherein the total molar amount is the sum of the molar amount of the conjugate and the molar amount of the unconjugated fusion construct, wherein the conjugate comprises the fusion construct conjugated to a phosphorylcholine-containing polymer, wherein the phosphorylcholine
- an intraocular therapeutic composition comprising a fusion construct at about 53 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDRH1): PFAMH (SEQ ID NO: 134), CDRH2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDRH3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDRL1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDR L 3: QQWSGYPYT (SEQ ID NO: 139), wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to
- each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is bonded to the heavy chain of the conjugate through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains;
- PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any halogen, including –Br, –Cl, or –I, d) –SCN, or e) –NCS; and n1, n2, n3, n4, n5, n6, n7, n8 and n9 are the same or different such that the sum of n1, n2, n3, n4, n5, n6, n7,
- an intraocular therapeutic composition comprising a fusion construct at about 53 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDR H 1): PFAMH (SEQ ID NO: 134), CDR H 2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDRH3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDRL1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDRL3: QQWSGYPYT (SEQ ID NO: 139), wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to about 40% of a total
- a method of making a composition comprising an anti-VEGF-A antibody conjugated to a phosphorylcholine-containing polymer.
- the method comprises: conjugating a first antibody to a phosphorylcholine-containing polymer, wherein the polymer is covalently bonded to the first antibody at a cysteine outside a variable region of the first antibody; combining a second antibody that is not conjugated to the phosphorylcholine-containing polymer with the first antibody.
- the second antibody is any anti-VEGF Fab.
- the second antibody is a Lucentis antibody (ranibizumab).
- the second antibody is present in the composition at a percent composition of 5% to 93% relative to the total protein mass weight concentration of the first antibody and the second antibody in the composition. In some embodiments, the second antibody is present in the composition at a percent composition of 5% to 50% relative to the total protein mass weight concentration of the first antibody and the second antibody in the composition. In some embodiments, the second antibody is present in the composition at a percent composition of 5% to 25% relative to the total protein mass weight concentration of the first antibody and the second antibody in the composition. In some embodiments, the purified antibody conjugate has at least a 1.5-fold increase in half-life relative to an unconjugated anti-VEGF-A antibody.
- unconjugated biologics have rapid efficacy in wAMD. In some embodiments, unconjugated biologics have deep efficacy in wAMD. In some embodiments, for any of the compositions herein, clinical durability of the composition resulting in little to no disease recurrence is desirable. [0308] In some embodiments, ranibizumab port delivery reservoir implant delivery efficacy in wAMD is desirable. In some embodiments, any of the compositions herein can result in longer durability without sacrificing immediate efficacy in wAMD by combining a conjugated version of the antibody in combination with an unconjugated version of the antibody.
- the combination of the conjugated and unconjugated antibody provides a desired balance of immediacy (or bolus activity), and of durability (or basal activity).
- any of the formulations and compositions herein can act to slow progress of retinal disease.
- any of the formulations and compositions herein can act to stop progress of retinal disease.
- any of the formulations and compositions herein are prepared with, or with about a 10% loading, or a 15% loading, or a 20% loading or a 25% loading, or a 30% loading, or a 35% loading of OG1950 mAb.
- the composition comprises a first antibody and a second antibody: wherein the first antibody is a conjugate; wherein the first antibody and second antibody have the same molecular weight, but the first antibody and second antibody can be the same or different proteins.
- the composition comprises a first antibody and a second antibody: wherein the first antibody is a conjugate; wherein the first antibody and second antibody have a similar molecular weight, but the first antibody and second antibody can be the same or different proteins.
- the composition comprises a first antibody and a second antibody: wherein the first antibody is a conjugate; wherein the first antibody and second antibody have different molecular weights, but the first antibody and second antibody can be the same or different proteins.
- this composition comprises a first active moiety and a second active moiety that can be any protein. In some embodiments, this composition comprises a first active moiety and a second active moiety in which the first active moiety is a full antibody and a second active moiety is an antibody fragment. In some embodiments, this composition comprises a first active moiety and a second active moiety in which the first active moiety is a full antibody and a second active moiety is an antibody fragment of the first active moiety.
- an anti-VEGF antibody conjugate in a mixed antibody and antibody-conjugate composition, is provided that is capable of blocking at least 90% of an interaction between a VEGF ligand (“VEGFL”) and a VEGF-receptor (“VEGFR”).
- VEGFL VEGF ligand
- VEGFR VEGF-receptor
- the noted blocking occurs at saturating concentrations.
- an anti-VEGF antibody conjugate blocks at least 95% of an interaction between a VEGF ligand and a VEGF-receptor.
- a VEGF ligand binds to a VEGF-receptor.
- FIG. 20 discusses the ability of OG1953 (and antibody conjugate provided herein) to block to a higher degree than Lucentis®(ranibizumab) or Avastin®(bevacizumab) or even the antibody OG1950 (unconjugated).
- the antibodies mixed with the conjugates thereof, of the composition thereof inhibit at least 70, 80, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, or 100% of the activity and/or interaction between VEGFR and VEGFL.
- the IC50 value can be 0.1, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 20, 30, 40, 50, 100 nM or less than any one or more of the preceding values.
- the KD can be 2*10 ⁇ -13, 1*10 ⁇ -13, 1*10 ⁇ -12, 1*10 ⁇ -11, 1*10 ⁇ -10M or less than any one of the preceding values.
- the IC 50 value can be 1, 5, 10, 20, 30, 40, 50, 60, 7080, 90, 100, 200, 300, 400, 500, 600, 700, 800, 900, 1,000, 1,100, 1,200, 1,300, or less than any one of the preceding values.
- this functionality can be in the antibody, the antibody conjugate, or both.
- an anti-VEGF antibody of the composition is provided that blocks at least 90% of an interaction between a VEGF ligand and a VEGF- receptor. For example, it can block at least 91, 92, 93, 94, 95, 96, 97, 98, 99%, or effectively all of the interaction between VEGFR and VEGFL.
- the composition can comprise other antibodies, such as Lucentis®(ranibizumab) or Avastin®(bevacizumab), and those antibodies can be conjugated to one or more of the polymers as described herein, by one or more of the processes described herein.
- any antibody, or fragment thereof can be conjugated to one or more of the polymers as described herein, by one or more of the processes described herein. In some embodiments, these can be the antibody, the antibody conjugate, or both.
- the antibody of the composition comprises a heavy chain amino acid variable region that comprises SEQ ID NO: 1 (with or without the C-terminal lysine), and a light chain amino acid variable region that comprises SEQ ID NO: 2.
- the antibody of the composition is conjugated to one or more of the polymers provided herein. In some embodiments, the conjugated antibody of the composition is at least 90% identical to SEQ ID NO: 1 and/or 2.
- the antibody of the composition contains the 6 CDRs within SEQ ID NO:1 and SEQ ID NO: 2, as well as a point mutation of L443C (EU numbering, or 449C in SEQ ID NO: 1).
- the conjugated antibody of the composition is at least 90% identical to SEQ ID NO: 1 and/or 2 and includes the following mutations: L234A, L235A, and G237A (EU numbering), and at least one of the following mutations: Q347C (EU numbering) or L443C (EU numbering).
- an antibody that binds to VEGF-A is provided in the composition.
- the antibody comprises: a CDRH1 that is the CDRH1 in SEQ ID NO: 1, a CDRH2 that is the CDR H 2 in SEQ ID NO: 1, a CDR H 3 that is the CDR H 3 in SEQ ID NO: 1, a CDR L 1 that is the CDR L 1 in SEQ ID NO: 2, a CDR L 2 that is the CDR L 2 in SEQ ID NO: 2, a CDR L 3 that is the CDR L 3 in SEQ ID NO: 2, at least one of the following mutations: L234A, L235A, and G237A (EU numbering), and at least one of the following mutations: Q347C (EU numbering) or L443C (EU numbering).
- any of the antibodies provided herein can be conjugated to any of the polymers provided herein and/or any antibody provided herein can have a cysteine added such that it allows for site specific conjugation to a polymer. In some embodiments, these can be the antibody, the antibody conjugate, or both.
- VEGF or “vascular endothelial growth factor” is a human vascular endothelial growth factor that affects angiogenesis or an angiogenic process.
- VEGF means any member of the class of growth factors that (i) bind to a VEGF receptor such as VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1), or VEGFR-3 (FLT-4); (ii) activates a tyrosine kinase activity associated with the VEGF receptor; and (iii) thereby affects angiogenesis or an angiogenic process.
- VEGF-A also known as VPE
- -B also known as VPE
- -C tyrosine kinase activity associated with the VEGF receptor
- PGF placental growth factor
- VEGF-A exists as a number of different isotypes which are generated both by alternative splicing and proteolysis: VEGF-A206, VEGF-A189, VEGF-A165, and VEGF- A121.
- the isoforms differ in their ability to bind heparin and non-signaling binding proteins called neuropilins.
- the isoforms are all biologically active as dimers.
- VEGF-A VEGF-A
- -B P49766
- -C P49767
- –D receptor tyrosine kinases
- RTKs receptor tyrosine kinases
- the VEGF family receptors belong to class V RTKs and each carry seven Ig-like domains in the extracellular domain (ECD).
- ECD extracellular domain
- VEGF binds to three types of RTKs: VEGFR-1 (Flt-1) (P17948), VEGFR-2 (KDR, Flk-1) (P935968) and VEGFR-3 (Flt-4) (P35916).
- VEGF vascular endothelial growth factor
- VEGF antagonist therapies have been approved for the treatment of certain cancers and wet AMD.
- Bevacizumab (AVASTIN, Genentech/Roche) is a humanized mouse monoclonal antibody that binds to and neutralizes human VEGF, in particular to all isoforms of VEGF-A and to bioactive proteolytic fragments of VEGF-A. See, e.g., Ferrara N, Hillan KJ, Gerber HP, Novotny W.2004. Discovery and development of bevacizumab, an anti-VEGF antibody for treating cancer. Nat Rev Drug Discov. 3(5):391-400. Bevacizumab has been approved for the treatment of certain cancers.
- Bevacizumab variable light chain CDRs are CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDRL2: FTSSLHS (SEQ ID NO: 13) and CDRL3: QQYSTVPWT (SEQ ID NO: 14).
- Bevacizumab variable heavy chain CDRs are CDRH1: GYTFTNYGMN, CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPHYYGSSHWYFDV.
- CDRs are defined by Kabat except CDRH1 uses the composite Kabat/Chothia definition.
- a cysteine can be added to the Bevacizumab sequence and the antibody (and/or a variant that includes the 6 CDRs of Bevacizumab) can be conjugated to any one or more of the polymers provided herein.
- Another anti-VEGF molecule derived from the same mouse monoclonal antibody as bevacizumab has been approved as a treatment for wet AMD: ranibizumab (LUCENTIS®(ranibizumab), Genentech/Roche).
- Ranibizumab is an antibody fragment or Fab.
- Ranibizumab was produced by affinity maturation of the variable heavy and light chains of bevacizumab.
- the sequence of the heavy and light chains of ranibizumab (as published by Novartis) is set forth in SEQ ID NO. 5 and 6 respectively.
- a cysteine can be added to the ranibizumab sequence and the antibody (and/or a variant that includes the 6 CDRs of ranibizumab) can be conjugated to any one or more of the polymers provided herein.
- the Ranibizumab CDRS are the same as Bevacizumab except where an improvement was added after affinity maturation:
- Ranibizumab variable light chain CDRs are CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDRL2: FTSSLHS (SEQ ID NO: 13) and CDR L 3: QQYSTVPWT (SEQ ID NO: 14).
- Ranibizumab variable heavy chain CDRs are CDR H 1: GYDFTHYGMN (SEQ ID NO: 9), CDR H 2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDR H 3: YPYYYGTSHWYFDV (SEQ ID NO: 11).
- an antibody conjugate of the composition is presented having an anti-VEGF-A antibody bonded at a cysteine outside a variable region of the antibody to a phosphorylcholine containing polymer, wherein the cysteine has been added via recombinant DNA technology.
- the polymer is bonded to a single cysteine.
- “added by recombinant DNA technology” means that the cysteine residue replaces a non-cysteine amino acid that occurs in the same position in a known or existing antibody or in a consensus antibody sequence.
- the anti-VEGF-A antibody of the composition comprises a light chain and a heavy chain where the heavy chain has an Fc region.
- the cysteine is in the Fc region and the anti-VEGF-A antibody of the composition is an immunoglobulin G (IgG).
- the anti-VEGF-A heavy chain has CDRH1: GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11), and position 221 (via sequential counting as in SEQ ID NO.
- the anti-VEGF-A heavy chain isotype is IgG1.
- the IgG1 constant domain has one or more mutations relative to an IgG1 constant domain (e.g. constant region of SEQ ID NO.3) to modulate effector function.
- the effector function mutations are one or more of the following: (EU numbering) E233X, L234X, L235X, G236X, G237X, A327X, A330X, and P331X wherein X is any natural or unnatural amino acid.
- the mutations are selected from the group consisting of (EU numbering): E233P, L234V, L234A, L235A, G237A, A327G, A330S, and P331S.
- antibody conjugate of the composition has the following mutations (EU numbering): L234A, L235A, and G237A.
- the cysteine residue is in the anti-VEGF-A heavy chain and is Q347C (EU numbering) or L443C (EU numbering). In some embodiments, the cysteine residue is L443C (EU numbering, or 449C in SEQ ID NO: 1).
- the sequence of the anti-VEGF-A heavy chain is SEQ ID NO: 1 (with or without the C-terminal lysine), and the sequence of the anti-VEGF-A light chain is SEQ ID NO: 2.
- the phosphorylcholine containing polymer comprises 2-(methacryloyloxyethyl)-2'-(trimethylammonium)ethyl phosphate (MPC) monomers as set forth below:
- the polymer comprises the following repeating units: where n is an integer from 1 to 3000 and the wavy lines indicate the points of attachment between monomer units in the polymer.
- the polymer has three or more arms, or is synthesized with an initiator comprising 3 or more polymer initiation sites.
- the polymer has 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 arms, or is synthesized with an initiator comprising 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, or 12 polymer initiation sites. More preferably, the polymer has 3, 6, or 9 arms, or is synthesized with an initiator comprising 3, 6, or 9 polymer initiation sites.
- the polymer has 9 arms, or is synthesized with an initiator comprising 9 polymer initiation sites.
- the polymer that is added has a molecular weight between about 300,000 and about 1,750,000 Da (SEC-MALs).
- the polymer has a molecular weight between about 500,000 and about 1,000,000 Da.
- the polymer has a molecular weight of between about 600,000 to about 900,000 Da.
- the polymer has a molecular weight of between about 700,000 to about 800,000 Da.
- the polymer has a molecular weight of between about 750,000 to about 850,000 Da.
- the polymer has a molecular weight of between about 800,000 to about 850,000 Da. In some embodiments, the polymer has a molecular weight of between about 750,000 to about 800,000 Da.
- any of the antibodies described herein of the composition can be further conjugated to a polymer to form a bioconjugate.
- the molecular weight of the bioconjugate (in total, SEC-MALs) can be between about 350,000 and 2,000,000 Daltons, for example, between about 450,000 and 1,900,000 Daltons, between about 550,000 and 1,800,000 Daltons, between about 650,000 and 1,700,000 Daltons, between about 750,000 and 1,600,000 Daltons, between about 850,000 and 1,500,000 Daltons, between about 900,000 and 1,400,000 Daltons, between about 950,000 and 1,300,000 Daltons, between about 900,000 and 1,000,000 Daltons, between about 1,000,000 and 1,300,000 Daltons, between about 850,000 and 1,300,000 Daltons, between about 850,000 and 1,000,000 Daltons, and between about 1,000,000 and 1,200,000 Daltons.
- the antibody conjugate is purified.
- the polymer aspect of the antibody conjugate is polydisperse, i.e. the polymer PDI is not 1.0.
- the PDI is less than 1.5.
- the PDI is less than 1.4.
- the PDI is less than 1.3.
- the PDI is less than 1.2.
- the PDI is less than 1.1.
- the antibody conjugate has an anti-VEGF-A immunoglobulin G (IgG) bonded to a polymer, which polymer comprises MPC monomers, wherein the sequence of the anti-VEGF-A heavy chain is SEQ ID NO.1, and the sequence of the anti-VEGF-A light chain is SEQ ID NO. 2, and wherein the antibody is bonded only at C449 in SEQ ID NO.1 to the polymer.
- the polymer has 9 arms and has a molecular weight of between about 600,000 to about 1,000,000 Da.
- the antibody conjugate has an anti-VEGF-A immunoglobulin G (IgG) bonded to a polymer, which polymer comprises MPC monomers, wherein the sequence of the anti-VEGF-A heavy chain is SEQ ID NO.1, and the sequence of the anti-VEGF-A light chain is SEQ ID NO. 2, and wherein the antibody is bonded only at C443 (EU numbering, or 449C in SEQ ID NO: 1) to the polymer.
- the polymer has 9 arms and has a molecular weight of between about 600,000 to about 1,000,000 Da.
- the antibody conjugate has the following structure: wherein: each heavy chain of the anti-VEGF-A antibody is denoted by the letter H, and each light chain of the anti-VEGF-A antibody is denoted by the letter L; the polymer is bonded to the anti-VEGF-A antibody through the sulfhydryl of C449 of SEQ ID NO: 1, which bond is depicted on one of the heavy chains; PC is, where the curvy line indicates the point of attachment to the rest of the polymer; wherein X is a) –OR where R is H, methyl, ethyl, propyl, or isopropyl, b) –H, c) any halogen, including –Br, –Cl, or –I, d) – SCN, or e) –NCS; and n1, n2, n3, n4, n5, n6, n7, n8 and n9 are the same or different such that
- X is –OR, where R is a sugar, an aminoalkyl, mono-substituted, poly-substituted or unsubstituted variants of the following residues: saturated C 1 -C 24 alkyl, unsaturated C 2 -C 24 alkenyl or C 2 -C 24 alkynyl, acyl, acyloxy, alkyloxycarbonyloxy, aryloxycarbonyloxy, cycloalkyl, cycloalkenyl, alkoxy, cycloalkoxy, aryl, heteroaryl, arylalkoxy carbonyl, alkoxy carbonylacyl, amino, aminocarbonyl, aminocarboyloxy, nitro, azido, phenyl, hydroxy, al
- the antibody conjugate is present in a liquid formulation. In some embodiments, the antibody conjugate is combined with a pharmaceutically acceptable carrier. [0337] In some embodiments, an anti-VEGF-A antibody is presented.
- the anti- VEGF-A antibody heavy chain has at least the following CDR sequences: CDR H 1: GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11).
- the anti- VEGF-A heavy chain has those CDRs and in addition has threonine (T) at position 221 (via sequential counting as in SEQ ID NO.3).
- the anti-VEGF-A light chain has at least the following CDRs: CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDRL2: FTSSLHS (SEQ ID NO: 13) and CDRL3: QQYSTVPWT (SEQ ID NO: 14).
- the anti-VEGF-A antibody has those CDRs and in addition has leucine (L) at Kabat position 4.
- the isotype of the anti-VEGF-A antibody heavy chain is IgG1 and has a CH 1 , hinge, CH 2 and CH 3 domains. In some embodiments the light chain isotype is kappa. [0338] In some embodiments, the IgG1 domain of the anti-VEGF-A antibody has one or more mutations to modulate effector function, such as ADCC, ADCP, and CDC. In some embodiments, the IgG1 mutations reduce effector function.
- the amino acids to use for effector function mutations include (EU numbering) E233X, L234X, L235X, G236X, G237X, G236X, D270X, K322X, A327X, P329X, A330X, A330X, P331X, and P331X, in which X is any natural or non-natural amino acid.
- the mutations include one or more of the following: E233P, L234V, L234A, L235A, G237A, A327G, A330S and P331S (EU numbering).
- the anti-VEGF-A heavy chain has the following mutations (EU numbering): L234A, L235A and G237A.
- the number of effector function mutations relative to a natural human IgG1 sequence is no more than 10. In some embodiments the number of effector function mutations relative to a natural human IgG1 sequence is no more than 5, 4, 3, 2 or 1.
- the antibody has decreased Fc gamma binding and/or complement C1q binding, such that the antibody’s ability to result in an effector function is decreased. This can be especially advantageous for ophthalmic indications/disorders.
- the anti-VEGF-A antibody comprises one or more of the following amino acid mutations: L234A, L235A, G237A (EU numbering), and L443C (EU numbering, or 449C in SEQ ID NO: 1).
- the anti-VEGF-A antibody is or is part of a human immunoglobulin G (IgG1).
- the VEGF-A antibody comprises a heavy chain constant domain that comprises one or more mutations that reduce an immune-mediated effector function.
- an anti-VEGF-A antibody is provided.
- the anti- VEGF-antibody comprises a heavy chain that comprises a CDRH1 comprising the sequence GYDFTHYGMN (SEQ ID NO: 9), a CDRH2 comprising the sequence WINTYTGEPTYAADFKR (SEQ ID NO: 10), a CDRH3 comprising the sequence YPYYYGTSHWYFDV (SEQ ID NO: 11), a CDRL1 comprising the sequence SASQDISNYLN (SEQ ID NO: 12), a CDR L 2 comprising the sequence FTSSLHS (SEQ ID NO: 13), and a CDR L 3 comprising the sequence QQYSTVPWT (SEQ ID NO: 14).
- the IgG domain can be IgG2, IgG3 or IgG4 or a composite in which constant regions are formed from more than one of these isotypes (e.g., CH1 region from IgG2 or IgG4, hinge, CH2 and CH3 regions from IgG1).
- Such domains can contain mutations to reduce and/or modulate effector function at one or more of the EU position mentioned for IgG1.
- Human IgG2 and IgG4 have reduced effector functions relative to human IgG1 and IgG3.
- the anti-VEGF-A heavy chain has a cysteine residue added as a mutation by recombinant DNA technology which can be used to conjugate a half-life extending moiety.
- the mutation is (EU numbering) Q347C (EU numbering) and/or L443C (EU numbering, or 449C in SEQ ID NO: 1). In some embodiments, the mutation is L443C (EU numbering, or 449C in SEQ ID NO: 1). In some embodiments, the stoichiometry of antibody to polymer is 1:1; in other words, a conjugate has one molecule of antibody conjugated to one molecule of polymer. [0345] The half-life of the anti-VEGF-A antibodies can be extended by attachment of a “half-life (“half life”) extending moieties” or “half-life (“half life”) extending groups”.
- Half-life extending moieties include peptides and proteins which can be expressed in frame with the biological drug of issue (or conjugated chemically depending on the situation) and various polymers which can be attached or conjugated to one or more amino acid side chain or end functionalities such as -SH, -OH, -COOH, -CONH2, -NH2, or one or more N- and/or O- glycan structures.
- Half-life extending moieties generally act to increase the in vivo circulatory half-life of biologic drugs.
- Examples of peptide/protein half-life extending moieties include Fc fusion (Capon DJ, Chamow SM, Mordenti J, et al. Designing CD4 immunoadhesions for AIDS therapy. Nature. 1989.
- HAS human serum albumin
- CTP carboxy terminal peptide
- polymer half-life extending moieties include polyethylene glycol (PEG), branched PEG, PolyPEG® (Warwick Effect Polymers; Coventry, UK), polysialic acid (PSA), starch, hydroxylethyl starch (HES), hydroxyalkyl starch (HAS), carbohydrate, polysaccharides, pullulane, chitosan, hyaluronic acid, chondroitin sulfate, dermatan sulfate, dextran, carboxymethyl-dextran, polyalkylene oxide (PAO), polyalkylene glycol (PAG), polypropylene glycol (PPG), polyoxazoline, polyacryloylmorpholine, polyvinyl alcohol (PVA), polycarboxylate, polyvinylpyrrolidone, polyphosphazene, polyoxazoline, polyethylene-co-maleic acid anyhydride, polystyrene-co-maleic acid anhydride, poly(
- a half-life extending moiety can be conjugated to an antibody via free amino groups of the protein using N-hydroxysuccinimide (NHS) esters.
- NHS N-hydroxysuccinimide
- Reagents targeting conjugation to amine groups can randomly react to ⁇ -amine group of lysines, ⁇ -amine group of N-terminal amino acids, and ⁇ -amine group of histidines.
- the anti-VEGF-A antibodies disclosed herein have many amine groups available for polymer conjugation. Conjugation of polymers to free amino groups, thus, might negatively impact the ability of the antibody proteins to bind to VEGF.
- a half-life extending moiety is coupled to one or more free SH groups using any appropriate thiol-reactive chemistry including, without limitation, maleimide chemistry, or the coupling of polymer hydrazides or polymer amines to carbohydrate moieties of the antibody after prior oxidation.
- maleimide coupling is used.
- coupling occurs at cysteines naturally present or introduced via genetic engineering.
- polymers are covalently attached to cysteine residues introduced into anti-VEGF-A antibodies by site directed mutagenesis.
- the cysteine residues are employed in the Fc portion of the antibody.
- the sites to introduce cysteine residues into an Fc region are provided in WO 2013/093809, US 7,521,541, WO 2008/020827, US 8,008,453, US 8,455,622 and US2012/0213705, incorporated herein by reference for all purposes.
- the cysteine mutations are Q347C (EU numbering) and L443C referring to the human IgG heavy chain by EU numbering.
- conjugates of antibody and high MW polymers serving as half-life extenders are provided.
- a conjugate comprises an antibody that is coupled to a zwitterionic polymer wherein the polymer is formed from one or more monomer units and wherein at least one monomer unit has a zwitterionic group is provided.
- the zwitterionic group is phosphorylcholine.
- one of the monomer units is HEMA-PC.
- a polymer is synthesized from a single monomer which is HEMA-PC.
- some antibody conjugates have 2, 3, or more polymer arms wherein the monomer is HEMA-PC.
- the conjugates have 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, or 12 polymer arms wherein the monomer is HEMA-PC. In some embodiments, the conjugates have 3, 6 or 9 arms. In some embodiments, the conjugate has 9 arms. [0355] In some embodiments, polymer-antibody conjugates have a polymer portion with a molecular weight of between 100,000 and 1,500,000 Da. In some embodiments, the conjugate has a polymer portion with a molecular weight between 500,000 and 1,000,000 Da. In some embodiments, the conjugate has a polymer portion with a molecular weight between 600,000 to 800,000 Da.
- the conjugate has a polymer portion with a molecular weight between 600,000 and 850,000 Da and has 9 arms.
- the molecular weight will be the addition of the molecular weight of the protein, including any carbohydrate moieties associated therewith, and the molecular weight of the polymer.
- an anti-VEGF-A antibody has a HEMA-PC polymer which has a molecular weight measured by Mw of between about 100 kDa and 1650 kDa is provided.
- the molecular weight of the polymer as measured by Mw is between about 500 kDa and 1000 kDa.
- the molecular weight of the polymer as measured by Mw is between about 600 kDa to about 900 kDa. In some embodiments, the polymer molecular weight as measured by Mw is 750 kDa plus or minus 15%.
- the polymer is made from an initiator suitable for ATRP having one or more polymer initiation sites. In some embodiments, the polymer initiation site has a 2-bromoisobutyrate site. In some embodiments, the initiator has 3 or more polymer initiation sites. In some embodiments, the initiator has 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 polymer initiation sites. In some embodiments, the initiator has 3, 6 or 9 polymer initiation sites.
- the initiator has 9 polymer initiation sites. In some embodiments, the initiator is OG1786.
- the anti-VEGF-A antibodies can be produced by recombinant expression including (i) the production of recombinant DNA by genetic engineering, (ii) introducing recombinant DNA into prokaryotic or eukaryotic cells by, for example and without limitation, transfection, electroporation or microinjection, (iii) cultivating the transformed cells, (iv) expressing antibody, e.g. constitutively or on induction, and (v) isolating the antibody, e.g. from the culture medium or by harvesting the transformed cells, in order to (vi) obtain purified antibody.
- the anti-VEGF-A antibodies can be produced by expression in a suitable prokaryotic or eukaryotic host system characterized by producing a pharmacologically acceptable antibody molecule.
- eukaryotic cells are mammalian cells, such as CHO, COS, HEK 293, BHK, SK-Hip, and HepG2.
- Other suitable expression systems are prokaryotic (e.g., E. coli with pET/BL21 expression system), yeast (Saccharomyces cerevisiae and/or Pichia pastoris systems), and insect cells.
- a wide variety of vectors can be used for the preparation of the antibodies disclosed herein and are selected from eukaryotic and prokaryotic expression vectors.
- vectors for prokaryotic expression include plasmids such as, and without limitation, preset, pet, and pad, wherein the promoters used in prokaryotic expression vectors include one or more of, and without limitation, lac, trc, trp, recA, or araBAD.
- vectors for eukaryotic expression include: (i) for expression in yeast, vectors such as, and without limitation, pAO, pPIC, pYES, or pMET, using promoters such as, and without limitation, AOX1, GAP, GAL1, GTH1 or AUG1; (ii) for expression in insect cells, vectors such as and without limitation, pMT, pAc5, pIB, pMIB, or pBAC, using promoters such as and without limitation PH, p10, MT, Ac5, OpIE2, gp64, or polh, and (iii) for expression in mammalian cells, vectors such as, and without limitation, pSVL, pCMV, pRc/RSV, pcDNA3, or pBPV, and vectors derived from, in one aspect, viral systems such as and without limitation vaccinia virus, adeno-associated viruses, herpes viruses, or retroviruses, using promoters such as
- a formulation or composition of the present disclosure can be prepared using any suitable option.
- the formulation is prepared by combining the protein that is not conjugated to a phosphorylcholine-containing polymer with a protein conjugated to a phosphorylcholine-containing polymer.
- the formulation is prepared by combining the protein that is not conjugated to a phosphorylcholine- containing polymer with a protein conjugated to a phosphorylcholine-containing polymer in respective amounts sufficient to achieve the desired proportion of conjugated and unconjugated protein in the formulation.
- a formulation or therapeutically acceptable composition can be prepared by combining an amount of the unconjugated protein that corresponds to 10 mg/mL in the final composition (percent composition of 20%), with an amount of a protein conjugate that corresponds to 40 mg/mL of the protein portion of the protein conjugate (excluding any contribution of the polymer to the mass weight concentration calculation) in the final composition.
- a method of preparing a formulation comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the second protein at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer
- a second molar amount of a second protein that is not conjugated to
- the formulation can include any suitable amount of the first and second protein, as provided herein.
- preparing the formulation includes adding an amount of a modified protein that does not have a reactive group (e.g., reactive cysteine) for conjugation with the protein before conjugation, and carrying out the conjugation reaction whereby only the reactive proteins are conjugated with the polymer, while the modified protein remains in unconjugated form.
- preparing the formulation includes providing a free protein without engineered cysteine for maleimide polymer conjugation, and mixing this in during or after the conjugation and purification process to result in mix formulation.
- the pH of the formulation can be any suitable pH units away from the pI of the second protein, as provided herein.
- the pH of the formulation if desired, can be adjusted to achieve the target pH using any suitable method.
- the method includes adjusting the pH, before or after combining.
- a method of preparing the compositions described herein comprising the step of adjusting the composition pH away from the isoelectric (pI) point of at least one of the proteins present in the composition to obtain a clear solution is provided.
- a method of preparing a formulation comprising adjusting the pH of a formulation to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the formulation, wherein the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the unconjugated protein, wherein the unconjugated protein is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the unconjugated protein at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the unconjugated protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to
- a method of preparing a formulation of a conjugated protein and an unconjugated protein includes: providing an initial formulation comprising a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; combining in a second formulation a second protein that is not conjugated to a phosphorylcholine-containing polymer with the conjugate; and adjusting the pH of the initial and/or second formulation to be about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, to thereby prepare a mix formulation comprising the conjugate at a first molar amount and the second protein at a second molar amount, wherein the mix formulation comprises the second protein at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the pH of the formulation is adjusted such that the prepared formulation has a suitable pH, as provided herein.
- the formulation before adjusting the pH, before or after the unconjugated protein and the conjugated protein are combined is at or around the pI of the unconjugated protein.
- the unconjugated protein, before combining with the conjugated protein and adjusting the pH is in a solution that is not or is substantially not turbid. In some embodiments, when the unconjugated protein is combined with the conjugated protein before adjusting the pH, the solution turns turbid.
- the formulation of the unconjugated protein and the conjugated protein is or becomes clear and non-turbid (e.g., by visual inspection, or as measured in NTU units, as provided herein).
- Adjusting the pH of the formulation can be done using any suitable option.
- adjusting the pH comprises substituting a buffering system of the formulation, wherein the buffering system is substituted to a buffering system that buffers at a pH that is about 0.5 pH units or more away from the pI of the protein.
- the buffering agent of the buffering system is selected to achieve the desired pH for the formulation.
- the buffering system includes a buffer selected from but not limited to acetate, phosphate, citrate, glycine, histidine, HEPES, MES, MOPS, and Tris buffers.
- adjusting the pH involves substituting an initial buffer (e.g., phosphate buffer) with an acetate buffer. Any suitable option can be used to substitute one buffering system with another, such as without limitation, dialysis, diafiltration, dilution followed by ultrafiltration, chromatography, etc.
- adjusting the pH comprises adding a base or acid to raise or lower the pH.
- methods of the present disclosure provide for a low- viscosity formulation of a protein conjugated to a phosphorylcholine-containing polymer.
- the method can include combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the protein that is not conjugated to the phosphorylcholine- containing polymer at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate unconjugated proteins, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the
- the prepared formulation has any suitable viscosity as provided herein.
- the reference formulation has a high viscosity, as provided herein.
- the prepared formulation or composition can be defined as a percent composition (e.g., in mass weight concentration) of one component relative to the total mass weight concentration of the proteins in the composition, as described herein.
- a method of preparing a formulation or composition defined in % total molar amount of the second protein can be defined in percent composition (e.g., in mass weight concentration) of the second protein relative to the total mass weight concentration of the first and second proteins, given the relevant molecular weight of each protein.
- Combining the conjugated protein with the unconjugated protein can be carried out using any suitable option.
- an amount of the conjugated protein is combined with an amount of the unconjugated protein at the desired ratio.
- the conjugated and unconjugated proteins are combined as part of the process for conjugating the polymer to the protein to be conjugated.
- the extent of conjugation can be adjusted such that not all of the initially provided unconjugated protein is conjugated as a result of the conjugation reaction.
- the unconjugated protein is combined with the conjugate protein at the end of the conjugation process.
- the conjugate is prepared by conjugating the protein to the polymer in a conjugation reaction, removing unconjugated protein remaining in the conjugation reaction to generate a purified conjugate, then combining the purified conjugate with an amount of the second protein that is not conjugated to a polymer.
- the conjugated and unconjugated proteins are combined through a combination of (i) adding an amount of unconjugated protein and (ii) adjusting the extent of the conjugation reaction.
- the conjugation process generates the unconjugated and conjugated protein of the composition or formulation from a common source of the unconjugated protein.
- preparing the formulation includes conjugating the polymer to the first protein. Suitable options for conjugating the polymer to the first protein include those provided herein, and in US patent publication no. 2017/0190766 and 2019/0270806, the entireties of which are incorporated herein by reference.
- preparing the formulation includes carrying out a conjugation reaction of the protein with the polymer using a lower excess of polymer to protein than required to conjugate all the protein with the polymer, such that some fraction of the protein remains unconjugated.
- preparing the formulation includes lowering the polymer to protein excess ratio to reduce the conjugation efficiency during the conjugation process, of which there will be more unreacted free protein in the final purified solution, which can result in higher free protein content at the end.
- any of the formulations or compositions herein can be produced by using a low molar excess ratio of polymer to protein by using an optimal process parameter for the antibody conjugate.
- lowering the conjugation efficiency of the polymer to the prepared (decapped and reoxidized) protein results in a higher amount of residual, unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) relative to conjugated protein (e.g., conjugated antibody or conjugated fusion construct).
- a desired ratio/amount of unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) to the conjugated protein is obtained by lowering the molar excess of biopolymer to protein, and lowering the conjugation efficiency.
- the resultant mixture of the conjugation reaction is reformulated to the desired pH and the desired buffer constituents, without purifying away the unconjugated protein.
- the prepared formulation has a mixture of unconjugated protein to conjugated protein, where the ratio is determined by the extent of molar excess of polymer used. In some embodiments, the molar excess of polymer is based on the amounts used to achieve a desired percent residual unconjugated protein (e.g., 20%) after the conjugation reaction of OG1802 to OG1950 to form OG1953 bioconjugate and retaining residual OG1950.
- any of the formulations and compositions herein can be produced by using an unconjugated protein (e.g., unconjugated antibody or unconjugated fusion construct) without an engineered cysteine that is mixed with proteins (e.g., antibodies or fusion construct) comprising a free cysteine (e.g., in their Fc region) during the conjugation reaction.
- the decapped and refolded protein or antibody undergoes further treatment with alkylation agents such as iodoacetamide (IAM) or N- ethylmaleimide (NEM).
- alkylation agents such as iodoacetamide (IAM) or N- ethylmaleimide (NEM).
- IAM iodoacetamide
- NEM N- ethylmaleimide
- a method of storing a protein comprising maintaining a protein in a formulation (or therapeutic composition or therapeutically acceptable composition) for at least 2 months and up to 2 years (or more), the formulation (or therapeutic composition or therapeutically acceptable composition) comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more (e.g., about 5-90%, 15-25%, 25-35%, 25-40%, etc.) of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, where
- the first and second proteins can be any suitable antibody or fusion construct, as described herein.
- the first and second proteins are an anti-VEGF antibody (e.g., OG1950, where the conjugated form is OG1953).
- the first and second proteins are a fusion construct comprising a VEGF Trap fused to the heavy chain of an anti-IL-6 antibody (e.g., OG2072, where the conjugated form is OG2074).
- the formulation (or therapeutic composition or therapeutically acceptable composition) can be any suitable formulation as provided herein.
- the formulation comprises the second protein (the unconjugated protein) at, or at about 1% or more, e.g., about or more, about 5% or more, about 10% or more, about 15% or more, about 20% or more, about 25% or more, about 30% or more, about 35% or more, about 40% or more, about 45% or more, about 50% or more, about 55% or more, about 60% or more, about 65% or more, about 70% or more, about 75% or more, about 80% or more, about 85% or more, or about 95% or less, about 90% or less, about 85% or less, about 80% or less, about 75% or less, about 70% or less, about 65% or less, about 60% or less, about 55% or less, about 50% or less, about 45% or less, about 40% or less, about 35% or less, about 30% or less of a total molar amount of the conjugate and the second protein, or optionally, the formulation includes the second protein at a percentage in a
- the formulation comprises the second protein (the unconjugated protein) at between about 5% and about 50%, or between about 15% and about 30% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at between about 15% and about 25% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at between about 25% and about 35% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at between about 25% and about 40% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at about 20% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation comprises the second protein (the unconjugated protein) at about 30% of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount of the conjugate and the second molar amount of the second protein.
- the formulation includes a surfactant (e.g., polysorbate 20), as described herein.
- the formulation includes a surfactant (e.g., polysorbate 20 or polysorbate 80), as described herein.
- the formulation (or therapeutic composition or therapeutically acceptable composition) includes a tonicity agent (e.g., sucrose or trehalose), as described herein.
- maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) at, at about, or at most at 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 30, 35, 40°C, or optionally it is stored at a temperature in a range defined by any two of the preceding values (e.g., 0-40°C, 0-10°C, 10-20°C, 20-30°C, 30-40°C, etc.). In some embodiments, maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) at a temperature in the range of 0- 10°C.
- maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) at a temperature in the range of 10-20°C. In some embodiments, maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) at or at about 5°C. In some embodiments, maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) at or at about 25°C. In some embodiments, maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) at room temperature. In some embodiments, maintaining the protein includes storing the formulation (or therapeutic composition or therapeutically acceptable composition) under ambient atmospheric pressure.
- the method includes preparing the formulation (or therapeutic composition or therapeutically acceptable composition) with any one of the methods of preparing the formulation (or therapeutic composition or therapeutically acceptable composition) of the present disclosure.
- Method of Conjugating Proteins to Polymers [0380] In some embodiments, a method is presented of preparing a therapeutic protein-half life extending moiety conjugate having the step of conjugating a therapeutic protein which has a cysteine residue added via recombinant DNA technology to a half-life extending moiety having a sulfhydryl specific reacting group selected from the group consisting of maleimide, vinylsulfones, orthopyridyl-disulfides, and iodoacetamides to provide the therapeutic protein-half life extending moiety conjugate.
- a method of preparing the OG1953 antibody conjugate from OG1950 comprises reducing the OG1950 protein with a 30x molar excess of the TCEP reducing agent (FIG. 18). After reduction, the antibody is oxidized to produce a decapped OG1950 antibody where the inter- and intra- light and heavy chain disulfide bonds naturally occurring in the antibody are formed, but the engineered Cysteine on the heavy chain position L443C (EU numbering, or 449C in SEQ ID NO: 1) remains decapped (FIG. 18). The OG1950 is then conjugated by adding 3.5x molar excess of a maleimide biopolymer. (FIG. 18).
- the biopolymer links to the OG1950 antibody through a covalent thiolether linkage (FIG. 18). After conjugation, the OG1953 antibody conjugate is purified with both unconjugated antibody and unreacted polymer being removed by CEX chromatography (FIG.18).
- the protein and process described above can be varied as well.
- a process for preparing a conjugated protein (which need not be an antibody or an anti-VEGF antibody) is provided. The process includes reducing one or more cysteines in a protein to form a reduced decapped protein in a solution.
- one or more cysteines of the decapped protein is reoxidized to restore at least one disulfide linkage while ensuring that an engineered cysteine residue in the protein remains in a free thiol form to form a reoxidized decapped protein in the solution.
- At least one excipient is then added to the solution. The excipient reduces a polymer induced protein precipitation. After the excipient is added, a polymer is added to the solution, which is conjugated to the reoxidized decapped protein at the engineered cysteine residue to form a conjugated protein.
- the molar excess of the reducing agent can be altered to any amount that functions.
- 5, 10, 20, 30, 40, 50, 60, 70, 80, 90x molar excess of the reducing agent (which need not be TCEP in all embodiments) can be employed.
- any antibody (therapeutic or otherwise) can be employed. In some embodiments, these can be the antibody, the antibody conjugate, or both. In some embodiments, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15x molar excess of a maleimide biopolymer can be employed. In some embodiments, there is an excess of decapped protein to polymer. In some embodiments, the amount of the re-oxidized decapped protein is less than the amount of the polymer.
- the amount of the re-oxidized decapped protein is 90%, 80%, 70%, 60%, 50%, 40%, 30%, 20%, 10%, 5%, 4%, 3%, 2%, 1% of the amount of the polymer. In some embodiments, 10-15 times as much polymer is used as protein. In some embodiments the amount of the re-oxidized decapped antibody is greater than the amount of the polymer. In some embodiments the amount of the polymer is greater than the amount of the re-oxidized decapped antibody. [0384] In some embodiments, the purification step is optional. [0385] In some embodiments, the method of making an antibody conjugate comprises conjugating an anti-VEGF-A antibody to a phosphorylcholine containing polymer.
- the method comprises the steps of conjugating an anti-VEGF-A antibody to a phosphorylcholine containing polymer.
- the anti-VEGF-A antibody comprises an amino residue added via recombinant DNA technology.
- the added amino acid residue is a cysteine residue.
- the cysteine residue is added outside a variable region of the antibody.
- the cysteine residue can be added to either the heavy chain or light chain of the antibody.
- the polymer comprises or consists of a phosphorylcholine containing polymer.
- the phosphorylcholine containing polymer comprises a sulfhydryl specific reacting group selected from the group consisting of a maleimide, a vinylsulfone, an orthopyridyl-disulfide, and an iodoacetamide.
- the sulfhydryl specific reacting group on the phosphorylcholine containing polymer reacts with the cysteine residue on the anti-VEGF-A antibody to make the antibody conjugate.
- the protein to be conjugated can be an antibody, an antibody protein fusion, or a binding fragment thereof.
- the protein is not an antibody but is an enzyme, a ligand, a receptor, or other protein or mutants or variants thereof.
- the native protein contains at least one disulfide bond and at least one non-native cysteine.
- the excipient can be an acid or a base.
- the excipient is a detergent, a sugar, or a charged amino acid.
- the excipient assists in keeping the protein in solution during the conjugation to the polymer.
- the excipient is added to the solution containing the protein, prior to the addition of the polymer to the solution that contains the protein.
- the conjugation reaction occurs under aqueous conditions between about pH 5.0 to about pH 9.0. In some embodiments, the reaction occurs between 6.0 and 8.5, between 6.5 and 8.0 or between 7.0 and 7.5 or between 8.0 and 9.0 or between 8.3 and 8.7. [0390] In some embodiments, the polymer is conjugated to the protein at 2-37 degrees Celsius. In some embodiments, the conjugation occurs at 0-40 degrees Celsius, 5-35 degrees Celsius, 10-30 degrees Celsius, and 15-25 degrees Celsius.
- the conjugated proteins described herein can be contacted to an ion exchange medium or hydrophobic interaction chromatography or affinity chromatography medium for purification (to separate the conjugated protein from the unconjugated protein and unreacted biopolymer).
- the ion exchange medium, hydrophobic interaction chromatography, and/or affinity chromatography medium separates the conjugated protein from the unreacted polymer and from the unconjugated protein.
- the processes described herein and outlined in FIG. 18 involves an excipient that is capable of facilitating and/or maintaining a solubility system. In some embodiments, the process allows the solution to maintain the solubility of the two components meant to interact.
- the issue can be that while the protein is soluble, when the biopolymer is added, the solubility of the solution (e.g., protein) drops andprecipitates form. Of course, when the protein forms precipitates, it is not available for conjugation.
- an excipient can be employed to maintain the solubility of the protein in the presence of the biopolymer so the two can couple to form the protein conjugate (or as depicted in FIG. 18, an antibody conjugate). This also allows for the solubility of the conjugate to be maintained.
- the polymers disclosed herein can comprise one or more of the following: a zwitterion, a phosphorylcholine, or a PEG linker bridging a center of a polymer branching point to the maleimide functional group.
- any of the polymers provided herein can be added to a protein via the methods provided herein.
- any of the proteins provided herein can be conjugated to any of the polymers provided herein via one or more of the methods provided herein.
- the process(es) provided herein allow(s) for larger scale processing to make and purify protein and/or antibody conjugates.
- the volume employed is at least 1 liter, for example 1, 10, 100, 1,000, 5,000, 10,000, liters or more.
- the amount of the antibody conjugate produced and/or purified can be 0.1, 1, 10, 100, 1000, or more grams.
- the therapeutic protein may be any of the anti- VEGF-A antibodies described herein having a cysteine residue added via recombinant DNA technology.
- the anti-VEGF antibody heavy chain has the following CDRs: CDRH1: GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11).
- the heavy chain can also have threonine (T) at position 221 (via sequential counting as in SEQ ID NO. 3).
- the anti-VEGF light chain has the following CDRs: CDR L 1: SASQDISNYLN (SEQ ID NO: 12), CDR L 2: FTSSLHS (SEQ ID NO: 13), and CDR L 3: QQYSTVPWT (SEQ ID NO: 14).
- the anti-VEGF-A light chain can also have leucine (L) at Kabat position 4.
- the anti-VEGF-A antibody (and/or conjugate thereof) is IgG1.
- the heavy chain has one or more mutations to modulate effector function.
- the mutations are to one or more of the following amino acid positions (EU numbering): E233, L234, L235, G236, G237, A327, A330, and P331.
- the mutations are selected from the group consisting of: E233P, L234V, L234A, L235A, G237A, A327G, A330S and P331S (EU numbering).
- the mutations are (EU numbering) L234A, L235A and G237A.
- the cysteine residue added to the therapeutic protein via recombinant DNA technology should not be involved in Cys-Cys disulfide bond pairing.
- therapeutic proteins may be dimeric.
- an intact anti-VEGF-A antibody has two light chains and two heavy chains. If a Cys residue is introduced into the heavy chain for instance, the intact antibody will have two such introduced cysteines at identical positions and the possibility exists that these cysteine residues will form intra-chain disulfide bonds. If the introduced cysteine residues form Cys-Cys disulfide bonds or have a propensity to do so, that introduced Cys residue will not be useful for conjugation. It is known in the art how to avoid positions in the heavy and light chains that will give rise to intra-chain disulfide pairing. See, e.g., U.S. Patent Application No. 2015/0158952.
- the cysteine residue introduced via recombinant DNA technology is selected from the group consisting of (EU numbering) Q347C and L443C.
- the cysteine residue is L443C (EU numbering, or 449C in SEQ ID NO: 1).
- the heavy chain of the antibody has the amino acid sequence set forth in SEQ ID NO.1 and the light chain has the amino acid sequence of SEQ ID NO.2.
- the sulfhydryl specific reacting group is maleimide.
- the half-life extending moiety is selected from the group consisting of polyethylene glycol (PEG), branched PEG, PolyPEG® (Warwick Effect Polymers; Coventry, UK), polysialic acid (PSA), starch, hydroxylethyl starch (HES), hydroxyalkyl starch (HAS), carbohydrate, polysaccharides, pullulane, chitosan, hyaluronic acid, chondroitin sulfate, dermatan sulfate, dextran, carboxymethyl-dextran, polyalkylene oxide (PAO), polyalkylene glycol (PAG), polypropylene glycol (PPG), polyoxazoline, polyacryloylmorpholine, polyvinyl alcohol (PVA), polycarboxylate, polyvinylpyrrolidone, polyphosphazene, polyoxazoline, polyethylene-co-maleic acid anyhydride, polystyrene-co- male
- the half-life extending moiety is a zwitterionic polymer.
- the zwitterion is phosphorylcholine, i.e. a phosphorylcholine containing polymer.
- the polymer is composed of MPC units.
- the MPC polymer has three or more arms. In some embodiments, the MPC polymer has 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 arms. In some embodiments, the MPC polymer has 3, 6, or 9 arms. In some embodiments, the MPC polymer has 9 arms. In some embodiments, the polymer is synthesized with an initiator comprising 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, or more polymer initiation sites.
- the MPC polymer has a molecular weight between about 300,000 and 1,750,000 Da. In some embodiments, the MPC polymer has a molecular weight between about 500,000 and 1,000,000 Da or between about 600,000 to 900,000 Da.
- the method of preparing a therapeutic protein-half life extending moiety conjugate has an additional step of contacting the therapeutic protein with a thiol reductant under conditions that produce a reduced cysteine sulfhydryl group. As discussed above, it is preferable that the cysteine residue added via recombinant DNA technology are unpaired, i.e.
- Cys residues which are not involved in such Cys-Cys disulfide bonding and are free for conjugation are known to react with free cysteine in the culture media to form disulfide adducts. See, e.g., WO 2009/052249. A cysteine so derivatized will not be available for conjugation.
- a reducing agent e.g., dithiothreitol, or TCEP.
- ambient air exposure overnight can be used to achieve reformation of the native disulfide bonds.
- an oxidizing agent is employed to restore the native disulfides.
- the oxiding agent is selected from the group consisting of aqueous CuSO4 and dehydroascorbic acid (DHAA).
- the oxidizing agent is DHAA.
- the range of DHAA used is in the range of 5-30 equivalents. In some embodiments, the range is 10-20 equivalents. In some embodiments, the range is 15 equivalents.
- the thiol reductant is selected from the group consisting of: Tris[2-carboxyehtyl]phosphine hydrochloride (TCEP), dithiothreitol (DTT), dithioerythritol (DTE), sodium borohydride (NaBH 4 ), sodium cyanoborohydride (NaCNBH3), ⁇ -mercaptoethanol (BME), cysteine hydrochloride and cysteine.
- the thiol reductant is TCEP.
- the thiol reductant concentration is between 1 and 100 fold molar excess relative to the therapeutic protein concentration.
- the thiol reductant concentration is between 20 to 50 fold molar excess relative to the therapeutic protein concentration. In some embodiments, the thiol reductant is removed following incubation with the therapeutic protein prior to oxidation of the therapeutic protein.
- the method for conjugating a therapeutic protein to a half-life extending moiety has a further step of purifying the therapeutic protein conjugate after conjugation. In some embodiments, the therapeutic protein conjugate is purified using a technique selected from the group consisting of ion exchange chromatography, hydrophobic interaction chromatography, size exclusion chromatography, mixed mode chromatography, and affinity chromatography or combinations thereof.
- the therapeutic protein conjugate retains at least 20% biological activity relative to unconjugated therapeutic protein. In some embodiments, the therapeutic protein conjugate retains at least 50% biological activity relative to unconjugated therapeutic protein. In some embodiments, the therapeutic protein conjugate retains at least 90% biological activity relative to native therapeutic protein. [0411] In some embodiments, the therapeutic protein conjugate has an increased half-life relative to unconjugated therapeutic protein. In some embodiments, the therapeutic protein conjugate has at least a 1.5-fold increase in half-life relative to unconjugated therapeutic protein. In some embodiments, the therapeutic protein conjugate has at least a 5- fold increase in half-life relative to unconjugated therapeutic protein.
- the zwitterionic polymer of the method of conjugating a therapeutic protein to a half-life extending moiety is a radically polymerizable monomer having a zwitterionic group and the method has a further step of polymerizing the free radically polymerizable zwitterionic monomer in a polymerization medium to provide a polymer, the medium comprising: the radically polymerizable zwitterionic monomer; a transition metal catalyst wherein Mt is a transition metal, q is a higher oxidation state of the metal and q-1 is a lower oxidation state of the metal, wherein the metal catalyst is supplied as a salt of the form Mt (q-1)+ X’ (q-1) wherein X’ is a counterion or group or the transition metal catalyst is supplied in situ by providing the inactive metal salt at its higher oxidation state Mt q+ X’q together with a reducing agent that is capable of reducing the transition metal from the oxid
- the transition metal should have at least two readily accessible oxidation states separated by one electron, a higher oxidation state and a lower oxidation state.
- ATRP a reversible redox reaction results in the transition metal catalyst cycling between the higher oxidation state and the lower oxidation state while the polymer chains cycle between having propagating chain ends and dormant chain ends.
- the radically polymerizable zwitterionic monomer is selected from the group consisting of wherein R1 is H or C1-6 alkyl, ZW is a zwitterion and n is an integer from 1-6.
- the radically polymerizable monomer is selected from the group consisting of wherein R1 is H or C1-6 alkyl, ZW is a zwitterion and n is an integer from 1-6.
- the radically polymerizable monomer is selected from the group consisting of wherein R1 is H or C1-6 alkyl, ZW is a zwitterion and n is an integer from 1-6.
- R1 is H or C 1-6 alkyl
- R2, R3, R4 are the same or different and are H or C 1-4 alkyl
- X and Y are the same or different and are integers from 1-6.
- R1, R2, R3 and R4 are each methyl and X and Y are each 2.
- the radically polymerizable monomer is wherein R1 is H or C1-6alkyl, R2 and R3 are the same or different and are H or C1-4alkyl, R4 is PO 4 -, SO 3 - or CO 2 - and X and Y are the same or different and are integers from 1-6.
- R1, R2 and R3 are methyl
- R4 is PO 4 - and X and Y are each 2.
- the monomer is
- R1 is H or C1-6alkyl
- R2, R3 and R4 are the same or different and are H or C1-4alkyl
- R5 is PO 4 -, SO 3 - or CO 2 -
- X and Y are the same or different and are integers from 1-6.
- R1, R2, R3 and R4 are methyl
- R5 is PO 4 - and X and Y are 2.
- the transition metal Mt is selected from the group consisting of Cu, Fe, Ru, Cr, Mo, W, Mn, Rh, Re, Co, V, Zn, Au, and Ag.
- the metal catalyst is supplied as a salt of the form Mt (q-1)+ X’(q-1).
- Mt (q-1)+ is selected from the group consisting of Cu 1+ , Fe 2+ , Ru 2+ , Cr 2+ , Mo 2+ , W 2+ , Mn 3+ , Rh 3+ , Re 2+ , Co + , V 2+ , Zn + , Au + , and Ag + and X’ is selected from the group consisting of halogen, C1-6 alkoxy, (SO4)1/2, (PO4)1/3, (R7PO4)1/2, (R72PO4), triflate, hexaluorophosphate, methanesulfonate, arylsulfonate, CN and R7CO 2 , where R7 is H or a straight or branched C 1-6 alkyl group which may be substituted from 1 to 5 times with a halogen.
- M t (q-1)+ is Cu 1+ and X’ is Br. [0419] In some embodiments, M t (q-1)+ is supplied in situ. In some embodiments, Mt q+ Xq is CuBr2.
- the reducing agent is an inorganic compound. In some embodiments, the reducing agent is selected from the group consisting of a sulfur compound of a low oxidation level, sodium hydrogen sulfite, an inorganic salt comprising a metal ion, a metal, hydrazine hydrate and derivatives of such compounds. In some embodiments, the reducing agent is a metal. In some embodiments, the reducing agent is Cu 0 .
- the reducing agent is an organic compound.
- the organic compound is selected from the group consisting of alkylthiols, mercaptoethanol, or carbonyl compounds that can be easily enolized, ascorbic acid, acetyl acetonate, camphosulfonic acid, hydroxy acetone, reducing sugars, monosaccharides, glucose, aldehydes, and derivatives of such organic compounds.
- the ligand is selected from the group consisting of 2,2'-bipyridine, 4,4'-Di-5-nonyl-2,2'-bipyridine, 4,4-dinonyl-2,2'-dipyridyl, 4,4',4''-tris(5- nonyl)-2,2':6',2''-terpyridine, N,N,N',N',N'-Pentamethyldiethylenetriamine, 1,1,4,7,10,10- Hexamethyltriethylenetetramine, Tris(2-dimethylaminoethyl)amine, N,N-bis(2- pyridylmethyl)octadecylamine, N,N,N',N'-tetra[(2-pyridal)methyl]ethylenediamine, tris[(2- pyridyl)methyl]amine, tris(2-aminoethyl)amine, tris(2-bis(3-
- the ligand is 2,2’-bipyridine.
- the initiator has the structure: wherein R1 is a nucleophilic reactive group, R2 comprises a linker, and R3 comprises a polymer synthesis initiator moiety having the structure wherein R4 and R5 and are the same or different and are selected from the group consisting of alkyl, substituted alkyl, alkylene, alkoxy, carboxyalkyl, haloalkyl, cycloalkyl, cyclic alkyl ether, alkenyl, alkenylene, alkynyl, alkynylene, cycloalkylene, heterocycloalkyl, heterocycloalkylene, aryl, arylene, arylene-oxy, heteroaryl, amino, amido or any combination thereof; Z is a halogen or CN; and s is an integer between 1 and 20.
- Z is Br and R4 and R5 are each methyl.
- R1 is selected from the group consisting of NH2-, OH-, and SH-.
- R2 is alkyl, substituted alkyl, alkylene, alkoxy, carboxyalkyl, haloalkyl, cycloalkyl, cyclic alkyl ether, alkenyl, alkenylene, alkynyl, alkynylene, cycloalkylene, heterocycloalkyl, heterocycloalkylene, aryl, arylene, arylene-oxy, heteroaryl, amino, amido or any combination thereof.
- R2 is wherein X and Y are the same or different and are integers from 1-20. In some embodiments, X and Y are each 4. [0425] In some embodiments, R3 is wherein R6, R7 and R8 are the same or different and are selected from the group consisting of
- the initiator has the structure:
- the method further has the step of reacting the polymer with a maleimide reagent to provide a polymer having a terminal maleimide.
- the maleimide compound is .
- a method of treating a subject comprising: intraocularly administering a therapeutically effective amount of the formulation or composition provided herein to a subject in need thereof (e.g., a subject having an ocular disease).
- intraocularly administering the formulation includes using a syringe loaded with the formulation and intraocularly injecting the formulation.
- a formulation e.g., low-viscosity formulation
- a formulation provided herein has enhanced injectability, e.g., when loaded into a syringe and injected at a site of treatment (e.g., intraocular administration).
- a formulation of the present disclosure improves the accuracy of measuring out the formulation compared to a reference formulation without the unconjugated protein. In some embodiments, a formulation of the present disclosure facilitates loading the formulation into a syringe and removing bubbles, compared to a reference formulation without the unconjugated protein. In some embodiments, a formulation of the present disclosure provides a shorter injection time (e.g., about 10 seconds or less, about 8 seconds or less, about 6 seconds or less, about 5 seconds or less, about 4 seconds or less, or a time period in a range defined by any two of the preceding values (e.g., 4-10 seconds, 5-9 seconds, 5-7 seconds, 4-8 seconds, etc.).
- a shorter injection time e.g., about 10 seconds or less, about 8 seconds or less, about 6 seconds or less, about 5 seconds or less, about 4 seconds or less, or a time period in a range defined by any two of the preceding values (e.g., 4-10 seconds, 5-9 seconds, 5-7 seconds
- a formulation of the present disclosure reduces the injection force when administering the formulation with a syringe compared to a reference formulation without the unconjugated protein (e.g., a reference composition where all the protein component is conjugated to the polymer, at the same total molar amount).
- the injection force to expel the formulation from a syringe fitted with a 27 or 29 gauge needle is about 12 N or less, e.g., about 10 N or less, about 9 N or less, about 8 N or less, about 7 N or less, about 6 N or less, about 5 N or less, or a force value in a range defined by any two of the preceding values (e.g., 5-12 N, 5-10 N, 5-8 N, 6-9 N, etc.).
- the method includes administering the formulation using a syringe fitted with a 27 or 29 gauge, or higher gauge, needle.
- the protein is an anti-VEGF-A antibody.
- a method for the treatment or prophylaxis of an ocular disease having the step of administering a therapeutic protein selected from the group consisting of an anti-VEGF-A antibody (and conjugates thereof).
- a therapeutic protein selected from the group consisting of an anti-VEGF-A antibody (and conjugates thereof).
- any one or more of the antibodies or antibody conjugates, fusion constructs or conjugates thereof provided herein can be used as treatment and/or prophylaxis for an ocular disease.
- the method includes administering to the subject any one or more of the antibodies and/or antibody conjugates provided herein. In some embodiments, this functionality can be the antibody, the antibody conjugate, or both. In some embodiments, the method includes administering to the subject any one or more of the fusion constructs and/or conjugates thereof provided herein.
- a method for treatment or prophylaxis of an ocular disease comprises administering an effective dose of any of the antibody and/or antibody conjugates described herein to a subject in need thereof. In some embodiments, the method includes administering an effective dose of any of the fusion constructs and/or conjugates thereof described herein to a subject in need thereof. In some embodiments a method for treatment or prophylaxis of an ocular disease includes administering an effective dose of any one of the formulations or therapeutically effective compositions described herein that include the antibody and/or antibody conjugates to a subject in need thereof.
- a method for treatment or prophylaxis of an ocular disease includes administering an effective dose of any one of the formulations or therapeutically effective compositions described herein that include the fusion constructs and/or conjugates thereof to a subject in need thereof.
- the disease can be age-related macular degeneration (AMD) or diabetic macular edema (DME).
- the disease can be wet AMD.
- administering an effective dose of the antibody and antibody conjugates described herein to a subject in need thereof includes administering any one of the formulations or therapeutically effective compositions described herein that include the antibody and/or antibody conjugates to the subject.
- administering an effective dose of the fusion constructs and/or conjugates thereof described herein to a subject in need thereof includes administering any one of the formulations or therapeutically effective compositions described herein that include the fusion constructs and/or conjugates thereof to the subject.
- the ocular disease is selected from one or more of the group consisting of diabetic retinopathy, choroidal neovascularization (CNV), age-related macular degeneration (AMD), diabetic macular edema (DME), pathological myopia, von Hippel-Lindau disease, histoplasmosis of the eye, central retinal vein occlusion (CRVO), branched central retinal vein occlusion (BRVO), corneal neovascularization, retinal neovascularization, retinopathy of prematurity (ROP), subconjunctival hemorrhage, and hypertensive retinopathy.
- the ocular disease is diabetic retinopathy.
- the antibody and/or antibody conjugate is administered no more frequently than once a month. In some embodiments, the antibody or conjugate thereof is administered two times per month or weekly. In some embodiments, the antibody or conjugate thereof is administered once every two months, once every three months, once every four months, once every five months, once every six months, once every seven months, once every eight months, once every nine months, once every ten months, once every eleven months, or once every twelve months. [0432] In some embodiments, one or more of the compositions provided herein can allow for a reduction in the consequences of high treatment burdens from the use of intravitreal injection of anti-VEGF agents for the treatment of the wet (proliferative) form of age-related macular degeneration (AMD).
- AMD age-related macular degeneration
- compounds, including antibody conjugates and anti- VEGF-A antibodies described herein are used to treat patients who have background or nonproliferative diabetic retinopathy but have little or no vision impairment.
- such patients are dosed less than once a month via intravitreal injection.
- such patients are dosed six times a year.
- such patients are dosed no more than four times a year.
- the patients are dosed no more than three times a year.
- the patients are dosed no more than twice a year.
- the patients are dosed no more than once a year.
- the subject receives the antibody or antibody conjugate via intravitreal injection.
- the therapeutic proteins e.g., both antibodies and antibody conjugates
- the therapeutic proteins can be employed by expression of such polypeptides in vivo in a patient, i.e., gene therapy.
- nucleic acid (optionally contained in a vector) into the patient's cells: in vivo and ex vivo.
- the nucleic acid is injected directly into the patient, usually at the sites where the therapeutic protein is required, i.e., where biological activity of the therapeutic protein is needed.
- the patient's cells are removed, the nucleic acid is introduced into these isolated cells, and the modified cells are administered to the patient either directly or, for example, encapsulated within porous membranes that are implanted into the patient (see, e.g., U.S. Pat. Nos. 4,892,538 and 5,283,187).
- the techniques vary depending upon whether the nucleic acid is transferred into cultured cells in vitro, or transferred in vivo in the cells of the intended host.
- Techniques suitable for the transfer of nucleic acid into mammalian cells in vitro include the use of liposomes, electroporation, microinjection, transduction, cell fusion, DEAE-dextran, the calcium phosphate precipitation method, etc.
- Transduction involves the association of a replication-defective, recombinant viral (including retroviral) particle with a cellular receptor, followed by introduction of the nucleic acids contained by the particle into the cell.
- a commonly used vector for ex vivo delivery of the gene is a retrovirus.
- the in vivo nucleic acid transfer techniques include transfection with viral or non-viral vectors (such as adenovirus, lentivirus, Herpes simplex I virus, or adeno-associated virus (AAV)) and lipid-based systems (useful lipids for lipid- mediated transfer of the gene are, for example, DOTMA, DOPE, and DC-Chol; see, e.g., Tonkinison et al., Cancer Investigation, 14(1): 54-65 (1996)).
- the vectors for use in gene therapy are viruses, which include adenoviruses, AAV, lentiviruses, or retroviruses.
- a viral vector such as a retroviral vector includes at least one transcriptional promoter/enhancer or locus-defining element(s), or other elements that control gene expression by other means such as alternate splicing, nuclear RNA export, or post-translational modification of messenger.
- a viral vector such as a retroviral vector includes a nucleic acid molecule that, when transcribed in the presence of a gene encoding the therapeutic protein, is operably linked thereto and acts as a translation initiation sequence.
- Such vector constructs also include a packaging signal, long terminal repeats (LTRs) or portions thereof, and positive and negative strand primer binding sites appropriate to the virus used (if these are not already present in the viral vector).
- such vector typically includes a signal sequence for secretion of the PRO polypeptide from a host cell in which it is placed.
- the signal sequence for this purpose is a mammalian signal sequence.
- the signal is the native signal sequence for the therapeutic protein.
- the vector construct may also include a signal that directs polyadenylation, as well as one or more restriction sites and a translation termination sequence.
- such vectors will typically include a 5 ⁇ LTR, a tRNA binding site, a packaging signal, an origin of second- strand DNA synthesis, and a 3 ⁇ LTR or a portion thereof.
- vectors can be used that are non-viral, such as cationic lipids, polylysine, and dendrimers.
- agent that targets the target cells such as an antibody specific for a cell-surface membrane protein or the target cell, a ligand for a receptor on the target cell, etc.
- proteins that bind to a cell-surface membrane protein associated with endocytosis may be used for targeting and/or to facilitate uptake, e.g., capsid proteins or fragments thereof tropic for a particular cell type, antibodies for proteins that undergo internalization in cycling, and proteins that target intracellular localization and enhance intracellular half-life.
- a method for treatment or prophylaxis of an ocular disease in a mammal in which a nucleic acid molecule that encodes a therapeutic protein selected from the group consisting of an anti-VEGF-A antibody is administered.
- the nucleic acid is set forth in FIG.27.
- the heavy chain is that set forth in SEQ ID NO. 1 (with or without the C-terminal lysine), and the light chain is that set forth in SEQ ID NO. 2.
- the nucleic acid molecule is administered via ex vivo gene therapy.
- Therapeutic proteins can be incorporated into a pharmaceutical composition with a pharmaceutically acceptable excipient.
- compositions adapted for oral administration may be presented as discrete units such as capsules, as solutions, syrups or suspensions (in aqueous or non-aqueous liquids; or as edible foams or whips; or as emulsions).
- Suitable excipients for tablets or hard gelatin capsules include lactose, maize starch or derivatives thereof, stearic acid or salts thereof.
- Suitable excipients for use with soft gelatin capsules include for example vegetable oils, waxes, fats, semi-solid, or liquid polyols etc.
- excipients which may be used include for example water, polyols and sugars.
- suspensions oils e.g.
- compositions can be adapted for nasal administration wherein the excipient is a solid include a coarse powder having a particle size for example in the range 20 to 500 microns which is administered in the manner in which snuff is taken, i.e. by rapid inhalation through the nasal passage from a container of the powder held close up to the nose.
- compositions adapted for administration by inhalation include fine particle dusts or mists which may be generated by means of various types of metered dose pressurized aerosols, nebulizers or insufflators.
- Pharmaceutical compositions adapted for parenteral administration include aqueous and non-aqueous sterile injection solution which may contain anti-oxidants, buffers, bacteriostats and solutes which render the formulation substantially isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents.
- Excipients which may be used for injectable solutions include water, alcohols, polyols, glycerine, and vegetable oils, for example.
- compositions may be presented in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilized) condition requiring only the addition of the sterile liquid carried, for example water for injections, immediately prior to use.
- sterile liquid carried, for example water for injections, immediately prior to use.
- Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets.
- Pharmaceutical compositions can be substantially isotonic, implying an osmolality of about 250-400 mOsm/kg water.
- the pharmaceutical compositions may contain preserving agents, solubilizing agents, stabilizing agents, wetting agents, emulsifiers, sweeteners, colorants, odorants, salts (substances may themselves be provided in the form of a pharmaceutically acceptable salt), buffers, coating agents or antioxidants. They may also contain therapeutically active agents in addition to the substance.
- the pharmaceutical compositions may be employed in combination with one or more pharmaceutically acceptable excipients. Such excipients may include, but are not limited to, saline, buffered saline (such as phosphate buffered saline), dextrose, liposomes, water, glycerol, ethanol, and combinations thereof.
- the antibodies and pharmaceutical compositions containing them may be administered in an effective regime for treating or prophylaxis of a patient’s disease including, for instance, administration by oral, intravitreal, intravenous, subcutaneous, intramuscular, intraosseous, intranasal, topical, intraperitoneal, and intralesional administration.
- Parenteral infusions include intramuscular, intravenous, intraarterial, intraperitoneal, or subcutaneous administration or routes among others.
- the active agent may be administered to an individual as an injectable composition, for example as a sterile aqueous dispersion.
- the agent is isotonic or substantially isotonic.
- these can be the antibody, the antibody conjugate, or both.
- the dosage of the active agent is from 0.01 mg/kg body weight, typically around 1 mg/kg.
- the physician can determine the actual dosage most suitable for an individual which depends on factors including the age, weight, sex and response of the individual, the disease or disorder being treated, and the age and condition of the individual being treated.
- the above dosages are exemplary of the average case. There can, of course, be instances where higher or lower dosages are merited.
- the dosage can be 0.5 to 20 mg/eye, e.g., 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, or 19 mg.
- the pharmaceutical composition may be administered once every one to thirty days. In one embodiment, the pharmaceutical composition may be administered twice every thirty days. In one embodiment, the pharmaceutical composition may be administered once a week. In some embodiments, the composition comprises an antibody and an antibody conjugate. [0449] The antibodies and pharmaceutical compositions can be employed alone or in conjunction with other compounds, such as therapeutic compounds or molecules, e.g. anti- inflammatory drugs, analgesics, or antibiotics.
- Such administration with other compounds may be simultaneous, separate, or sequential.
- the components may be prepared in the form of a kit which may comprise instructions as appropriate. In some embodiments, these can be the antibody, the antibody conjugate, or both.
- the antibodies and pharmaceutical compositions disclosed herein can be used for treatment or prophylaxis of disease, particularly the ocular diseases or conditions described herein. In some embodiments, this functionality can be the antibody, the antibody conjugate, or both.
- the conjugates are typically formulated for and administered by ocular, intraocular, and/or intravitreal injection, and/or juxtascleral injection, and/or subretinal injection and/or subtenon injection, and/or superchoroidal injection, and/or subconjunctival, and/or topical administration in the form of eye drops and/or ointment.
- Such antibodies and compositions can be delivered by a variety of methods, e.g. intravitreally as a device and/or a depot that allows for slow release of the compound into the vitreous, including those described in references such as Intraocular Drug Delivery, Jaffe, Ashton, and Pearson, editors, Taylor & Francis (March 2006).
- a device may be in the form of a minipump and/or a matrix and/or a passive diffusion system and/or encapsulated cells that release the compound for a prolonged period of time (Intraocular Drug Delivery, Jaffe, Ashton, and Pearson, editors, Taylor & Francis (March 2006).
- Formulations or pharmaceutical compositions for ocular, intraocular or intravitreal administration can be prepared by methods and using ingredients known in the art. A main requirement for efficient treatment is proper penetration through the eye. Unlike diseases of the front of the eye, where drugs can be delivered topically, retinal diseases require a more site-specific approach.
- Therapeutic antibodies and related conjugates generally are placed into a container having a sterile access port, for example, an intravenous solution bag or vial having a stopper pierceable by a hypodermic injection needle. Such compositions may also be supplied in the form of pre-filled syringes.
- a “stable” formulation or composition is one in which the protein or protein conjugated to a polymer of other half-life extending moiety therein essentially retains its physical stability and/or chemical stability and/or biological activity upon storage.
- stable is also meant a formulation which exhibits little or no signs of instability, including aggregation and/or deamidation.
- the formulations provided may remain stable for at least two years when stored as indicated at a temperature of 5-8°C.
- Various analytical techniques for measuring protein stability are available in the art and are reviewed in Peptide and Protein Drug Delivery, 247-301 (Vincent Lee ed., New York, N.Y., 1991) and Jones, 1993 Adv. Drug Delivery Rev.
- a protein such as an antibody or fragment thereof, "retains its physical stability" in a pharmaceutical composition or formulation if it shows no signs of aggregation, precipitation, deamidation and/or denaturation upon visual examination of color and/or clarity, or as measured by UV light scattering or by size exclusion chromatography.
- a protein "retains its chemical stability” in a pharmaceutical composition or formulation, if the chemical stability at a given time is such that the protein is considered to still retain its biological activity.
- Chemical stability can be assessed by detecting and quantifying chemically altered forms of the protein.
- Chemical alteration may involve size modification (e.g., clipping), which can be evaluated using size exclusion chromatography, SDS-PAGE and/or matrix-assisted laser desorption ionization/time-of-flight mass spectrometry (MALDI/TOF MS), for example.
- size modification e.g., clipping
- MALDI/TOF MS matrix-assisted laser desorption ionization/time-of-flight mass spectrometry
- Other types of chemical alteration include charge alteration (e.g., occurring as a result of deamidation), which can be evaluated by ion- exchange chromatography, for example.
- an antibody "retains its biological activity” in a pharmaceutical composition or formulation, if the biological activity of the antibody at a given time is within about 10% (within the errors of the assay) of the biological activity exhibited at the time the pharmaceutical composition or formulation was prepared as determined in an antigen binding assay, for example.
- a protein-polymer conjugate “retains its chemical stability” the chemical bond between the protein and the polymer is maintained intact, e.g., it is not hydrolyzed or otherwise disrupted. The protein part of the conjugate retains its chemical stability as described above.
- isotonic is meant that the composition or formulation of interest has essentially the same osmotic pressure as human blood or the vitreous for intravitreal injections.
- Isotonic compositions or formulations will generally have an osmotic pressure from about 250 to 400 mOsm. Isotonicity can be measured using a vapor pressure or ice-freezing type osmometer, for example.
- buffer refers to a buffered solution that resists changes in pH by the action of its acid-base conjugate components.
- the buffer has a pH from about 3.0 to about 8.0; for example from about 4.5 to 8.0; or about pH 6.0 to about 7.5; or about 6.0 to about 7.0, or about 6.5-7.0, or about pH 7.0 to about 7.5; or about 7.1 to about 7.4.
- the buffer has a pH from about 4.0 to about 5.0.
- “PBS” phosphate buffered saline, Tris based buffers and histidine based buffers are used.
- an acetate buffer e.g., sodium acetate buffer at pH 4.0-5.0, e.g., at about pH 4.5, or about 5.0
- a composition of formulation of the present disclosure includes a surfactant.
- a suitable surfactant includes, without limitation, a polysorbate.
- the polysorbate is polysorbate 20, polysorbate 40, or polysorbate 80. In some embodiments, the polysorbate is polysorbate 20. In some embodiments, the polysorbate is present in the composition or formulation at about 0.001%-0.1% (w/w), or about 0.01%- 0.05%, or about 0.02%-0.03%.
- the polysorbate is present in the composition or formulation at a concentration of, of about, or of at least 0.001, 0.002, 0.005, 0.01, 0.02, or 0.025% (w/w) or at, about, or at a concentration of at most 0.1, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, or 0.025 % (w/w), or a percentage (w/w) in a range defined by any two of the preceding values.
- the PBS buffer is made up of at least Na 2 HPO 4 , KH 2 PO 4 and NaCl adjusted so as to provide the appropriate pH.
- the buffer may contain other pharmaceutical excipients such as KCl and other salts, detergents and/or preservatives so as to provide a stable storage solution.
- a "preservative" is a compound which can be included in the composition or formulation to essentially reduce bacterial action therein, thus facilitating the production of a multi-use formulation, for example. Examples of potential preservatives include octadecyldimethylbenzyl ammonium chloride, hexamethonium chloride, benzalkonium chloride (a mixture of alkylbenzyldimethylammonium chlorides in which the alkyl groups are long-chain compounds), and benzethonium chloride.
- Endotoxin is lipopolysaccharide (LPS) derived from the cell membrane of Gram-negative bacteria. Endotoxin is composed of a hydrophilic polysaccharide moiety covalently linked to a hydrophobic lipid moiety (lipid A).
- EU endotoxin units
- EU is a measurement of the biological activity of an endotoxin. For example, 100 pg of the standard endotoxin EC-5 and 120 pg of endotoxin from Escherichia coli O111:B4 have activity of 1 EU (Hirayama C, Sakata M. 2002.
- the vitreous is a chamber where high levels of drug can be introduced and maintained for relatively long periods of time.
- the concentration of drug that can be achieved via intravitreal injection far exceeds what can be generated by topical administration or by systemic administration (e.g. intravenous).
- intravitreal injections One of the most dangerous complications potentially arising from intravitreal injections is endophthalmitis.
- Endophthalmitis falls into two classes: infectious and sterile. Infectious endophthalmitis is generally caused by bacteria, fungi or parasites. The symptoms of infectious endophthalmitis include severe pain, loss of vision, and redness of the conjunctiva and the underlying episclera. Infectious endophthalmitis requires urgent diagnosis and treatment.
- Marticorena J is approved by the Food and Drug Administration for the treatment of glioblastoma and of metastatic colorectal cancer, advanced nonsquamous non-small-cell lung cancer and metastatic kidney cancer. Bevacizumab is also widely used off label as a treatment for wet AMD.
- Bevacizumab comes from the manufacturer as a 100 mg/4 ml dose. This solution cannot be directly used for intravitreal injection and should be compounded by a pharmacist. Clusters of sterile endophthalmitis have been observed and are theorized to be caused by inadvertent contamination of bevacizumab by endotoxin by the compounding pharmacist. [0471] Given the dire clinical results of intravitreal injection of endotoxin, the total amount of endotoxin that can be given to a patient via intravitreal dosing is highly limited. In some embodiments, a solution having an antibody or antibody-conjugate is provided having an endotoxin level that does not exceed 5.0 EU/ml.
- the endotoxin level does not exceed 1.0 EU/ml. In some embodiments, the endotoxin level does not exceed 0.5 EU/ml. In some embodiments, the endotoxin level does not exceed 0.2 EU/ml. In some embodiments, the endotoxin level does not exceed 2, 1, 0.5, 0.2, 0.1, 0.09, 0.08, 0.07, 0.06, 0.05, 0.04, 0.03, 0.02 or 0.01 EU/ml.
- Two commonly used FDA-approved tests for the presence of endotoxin are the rabbit pyrogen test and Limulus Amoebocyte Lysate (LAL) assay (Hoffman S, et al.2005.
- LAL test LAL is derived from the blood of a horseshoe crab and clots upon exposure to endotoxin.
- the LAL clotting assay is combined with a serial dilution of the sample in question. Formation of the gel is proportional to the amount of endotoxin in the sample. Serial dilutions are prepared from the sample and each dilution assayed for its ability to form LAL gel. At some point a negative reaction is contained. The amount of endotoxin in the original sample can be estimated from the dilution assay.
- Other LAL tests have also been developed, including the turbidimetric LAL assay (Ong KG, Lelan JM, Zeng KF, Barrett G, Aourob M, Grimes CA.2006. A rapid highly- sensitive endotoxin detection system.
- Biosensors and Bioelectronics 21:2270-2274 and the chromogenic LAL assay (Haishima Y, Hasegawa C, Yagami T, Tsuchiya T, Matsuda R, Hayashi Y. 2003. Estimation of uncertainty in kinetic-colorimetric assay of bacterial endotoxins. J Pharm Biomed Analysis. 32:495-503).
- the turbidimetric and chromogenic assays are much more sensitive and quantitative than the simple gel-clot dilution assay.
- a method of reducing the amount of endotoxin in a composition having an antibody disclosed herein is provided.
- the method having the steps of contacting the composition with an affinity chromatography resin that binds to the antibody; eluting the antibody from the affinity chromatography resin to form an affinity chromatography eluent having the antagonist; contacting the affinity chromatography eluent with an ion-exchange resin that binds the antibody; and eluting the antibody from the ion- exchange resin, wherein the antibody eluted from the ion-exchange resin is substantially free from endotoxin.
- the above method for reducing the amount of endotoxin, or other method or process recited herein, can be performed in the order described in the steps above or it can optionally be performed by varying the order of the steps or even repeating one or more of the steps.
- the method of reducing the amount of endotoxin in a composition is performed in the order of the described steps.
- the affinity chromatography resin contacting, washing and eluting steps are repeated in the same order more than one time before contacting the affinity chromatography eluent with the ion exchange resin.
- the method can also include a filtering step using, for example, a 0.1 micron, 0.22 micron, or 0.44 micron filter, that can be performed on either one or more of the eluents removed after each resin binding step.
- the steps of contacting the composition with affinity chromatography resin, washing and eluting the antibody from the affinity chromatography resin can be repeated more than one time before contacting the first eluent with an ion- exchange resin.
- the affinity chromatography resin comprises a recombinant Protein A ("rProteinA") resin.
- rProteinA recombinant Protein A
- a suitable recombinant Protein A resin is MabSelect Sure (Cytiva).
- a suitable affinity chromatography resin would comprise a protein G chromatography resin.
- a suitable affinity chromatography resin comprises a mixed Protein A/Protein G resin.
- the ion exchange resin comprises an anion-exchange resin.
- ion exchangers may be based on various materials with respect to the matrix as well as to the attached charged groups.
- the following matrices may be used, in which the materials mentioned may be more or less cross-linked: POROS XS (Thermo Fisher Scientific, Waltham, MA),, agarose based (such as SP35 Praesto Jetted SP35 IEX (Purolite, King of Prussia, PA, SmartSep (YMC, Shimogyo, Japan), cellulose based (such as DEAE Sephacel®), dextran based (such as Sephadex®), silica based and synthetic polymer based.
- POROS XS Thermo Fisher Scientific, Waltham, MA
- agarose based such as SP35 Praesto Jetted SP35 IEX (Purolite, King of Prussia, PA, SmartSep (YMC, Shimogyo, Japan)
- cellulose based such as DEAE Sephacel®
- dextran based such as Sephadex
- the charged groups, which are covalently attached to the matrix may, for example, be diethylaminoethyl, quaternary aminoethyl, and/ or quaternary ammonium.
- the anion-exchange resin comprises a quaternary amine group.
- An exemplary anion-exchange resin that has a quaternary amine group is a POROS XQ resin (Thermo Fisher Scientific, Waltham, MA).
- the composition may in the alternative be subjected to a cation exchange resin.
- any endotoxin in the composition should have a differential binding to the ion- exchange resin than the protein in question to allow purification of the protein from the endotoxin.
- endotoxin is negatively charged and will generally bind to an anion exchange resin. If both the protein and the endotoxin bind to the anion exchange resin, purification of one from the other may be effectuated by using a salt gradient to elute the two into different fractions.
- the relative binding of the protein to a particular resin may also be affected by changing the pH of the buffer relative to the pI of the protein.
- cation-exchange chromatography is the sole ion-exchange chromatography employed.
- the composition may be further subjected to a second ion-exchange step, for example, by contacting the compositions with a cation exchange resin and followed by a wash step, then elution from the ion-exchange resin.
- the cation exchange resin comprises a sulfonic group for binding.
- Exemplary cation exchange resins include Poros XS (CEX) (Thermo Fisher Scientific, Waltham, MA).
- a phosphorylcholine-containing polymer (which in some embodiments can be a half-life extending moiety) is conjugated to the protein.
- the conjugate is then formulated into a final drug formulation which is injected into the patients.
- the conjugate is again purified on an ion-exchange resin which can be a cation-exchange resin.
- the protein is formulated. In all cases, normal laboratory procedures should be employed to prevent the introduction of endotoxin contaminants into the protein sample or into the protein-polymer conjugate.
- a kit configured to deliver the formulations and compositions herein.
- a kit can include: a pre-filled syringe comprising a low-viscosity formulation comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a syringe needle configured to fit on the syringe, wherein the gauge of the needle is 27 or more.
- the syringe can include any of the formulations provided herein.
- the needle gauge is 27 or more, 29 or more, or 30 or more.
- the syringe and needle are configured for administering the formulation intraocularly.
- a formulation (or therapeutically acceptable composition) comprises a first molar amount of a conjugate having a first protein conjugated to a phosphorylcholine-containing polymer and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation or composition comprises the second protein at about 0.1% or more (e.g., at about 0.2%, at about 0.3%, at about 0.4%, at about 0.5% or more) of a total molar amount of the conjugate and the second protein, and a pharmaceutically acceptable carrier, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a formulation (or therapeutically acceptable composition) comprises a conjugate having a first protein conjugated to a phosphorylcholine-containing polymer and a second protein the second protein that is not conjugated to a phosphorylcholine-containing polymer, and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 0.1% or more (e.g., about 0.2%, about 0.3%, about 0.4%, about 0.5% or more).
- Viscosity Without being limited by theory, increasing the amount of unconjugated mAb while keeping other factors the same e.g., such as dose of the bioactive (the mAb, whether unconjugated or conjugated), the concentration of the composition or formulation (in mg/mL of bioactive antibody), the volume of administration limit, can lead to an increase in mass of the components in a small volume and therefore a high viscosity. So keeping the total amount of protein the same at say a 50 mg/mL concentration of antibody (inclusive of both conjugated and unconjugated antibody) and decreasing the amount of the conjugated version can result in more unconjugated protein and less conjugated protein and thus less biopolymer, and therefore a lower total mass.
- decreasing viscosity while keeping the overall dose administered the same manufacturability can be improved, such as transfer of material and filtering (e.g., through two 0.2 micron filters using a single pump).
- decreasing viscosity at high overall dose improves manufacturability by reducing the volume required to fill vials and syringes (to achieve a desired extractable volume). Without being bound by theory, the higher the viscosity then the extractable volume will be lower for a vial.
- loading a syringe can involve drawing up the solution from the vial up into a dosing syringe through an 18-gauge filter needle to remove any particulates (for example glass shards exfoliated from the glass vial), and then once in the dosing syringe, removing any bubbles formed during the loading by manipulating the plunger rod up and down, and then aligning the plunger to the dose line on the syringe to set the dose (for example, 100 microliter dose).
- any particulates for example glass shards exfoliated from the glass vial
- All of these steps can require a certain amount of volume in the vial and the dosing syringe, and if the extractable volume is too low because the viscosity is high and the solution is not free flowing and is sticking more to the wall of the vial, then there is a risk of not having sufficient volume extracted from the vial to be able to set and achieve a precise and accurate and sufficient dose volume of for example 100 microliters.
- filling a formulation into vials or syringes can include the use of a vacuum filling process, in which a vacuum is created inside the vial or syringe, and then the filling needle enters the vacuum, preferably the needle is programmed to descend close to the bottom of the vial or syringe, and then as the solution flows through the needle dispensing the product, the needle is pulled up automatically at a predefined rate.
- the needle may be a closing needle. The higher the viscosity, the more likely the need to use a vacuum filling process or a closing needle which add cost and complexity to the manufacturing process.
- a vial filled drug product is pulled up into a dosing syringe, bubbles (if any) are removed, and then expressed through a needle into the patient’s eyes in an ophthalmology clinic setting.
- bubbles if any
- the more viscous the formulation the more skill, time and manipulation may be required to draw up the material into the dosing syringe and the harder to remove the bubble.
- filling the formulation directly into a prefilled syringe removes the issues of dose transfer from the vial into the dosing syringe.
- filling directly into a PFS includes: providing dose accuracy, e.g., for 100 microliter dose volume, for example, fill 200 microliter total dose with 10% precision/accuracy, which may be a 180 – 220 microliter range. To achieve this, high accuracy of the filling system is needed.
- the viscosity is reduced to the point that when the syringe is turned upside down (with needle side pointing toward the sky), the bubble pops from the plunger side up to the needle/Luer Lock side and the air (with needle attached) can be evacuated in the process of aligning/setting the final dose by aligning the plunger with the dose line on the syringe, evacuating the air along with the excess volume of dose (200 microliters filled into the syringe, then setting dose at 100 microliter, with excess being expressed out of the needle end while also creating the fully-liquid-path from pre-filled syringe (PFS) inner chamber through needle hub and through needle.
- PFS fully-liquid-path from pre-filled syringe
- the bubble stays fixed, and may be removed only with difficulty by manipulation of the plunger via the plunger rod.
- the formulations can be pumped using peristaltic pumps, in order to achieve high accuracy (for example, filling 200 microliters into a pre-filled syringe. immediacy
- a formulation of the present disclosure can provide a pre-determined balance of basal and bolus (basal-bolus regimen) effects, basal being long- acting in its duration of effect and bolus being more immediate and short-lived in its effect.
- the formulations of the present disclosure provide these effects together into a single formulation for ophthalmology intravitreal injection.
- one injection can be administered to the patient to provide these effects.
- the formulation provides (i) immediacy to control the disease in an immediate manner directly after injection, and (ii) a long duration of effect, i.e. a long durability.
- a patient can benefit from (1) a higher immediacy (bolus effect) after injection to control the disease in the immediate post-injection period and this gives time for the basal effects to kick in over time and deliver a multi-month or longer durability of effect, and (2) immediacy (bolus) and durability (basal) with flexibility to be treated as often as monthly to treat very high disease severity.
- a basal- bolus integrated medicine for intravitreal ophthalmology medicines provides broad flexibility of dosing, from once monthly to once every six or nine months or less frequent and to have a pre-defined balance of immediacy (bolus) and durability (basal) in each injected dose.
- the long-acting basal is provided by the conjugate (protein conjugated to the phosphorylcholine biopolymer) in which the residence time is long, i.e.
- the half-life in the eye is long and in which the exit rate from the vitreous to additional ocular tissues of action (retina, choroid) is slow providing for the long duration of effect; and the immediacy bolus is provided by the unconjugated protein in which the residence time is relatively short, i.e. the half-life in the eye is short and in which the exit rate from the vitreous to the additional ocular tissues of action (retina, choroid) is fast providing for a strong immediacy but not for a long durability.
- Comparative half-life of some proteins and conjugates are known.
- the amount of the drug is measured in each ocular tissue of interest.
- the drug then diffuses from the vitreous to reach: the layers of the retina composed of the retina support cells and then the retina photoreceptor cells; and then reaching the retinal pigment epithelium (RPE) layer; then traversing Bruch’s membrane; then reaching the capillaries and large and small blood vessels of the choroid; and from there clearance from the eye into the systemic circulation.
- RPE retinal pigment epithelium
- Smaller proteins have the shortest half- life.
- conjugated proteins have the longest half-life.
- a defined amount of free protein and a defined amount of conjugate allows a desired immediacy (similar amount of free protein VEGF binding sites as marketed proteins) and a desired amount of durability (a large amount of protein VEGF binding sites with a long durability), and a formulation having a desired basal- bolus regimen or profile can be designed and developed as a single formulation and a single infrequent intravitreal injection therapy.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- a therapeutically acceptable composition comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a therapeutically acceptable carrier, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein. 4.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has a reduced viscosity and/or an enhanced injectability compared to a reference formulation comprising the conjugate at the total molar amount.
- pI isoelectric point
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced viscosity and/or an enhanced injectability compared to a reference composition comprising the conjugate, wherein the first protein of the conjugate is present in the reference composition at the total mass weight concentration of the first and second proteins in the composition.
- a pharmaceutically acceptable carrier wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away
- a low-viscosity formulation of a protein conjugate comprising: a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the formulation has reduced viscosity and/or an enhanced injectability compared to a reference formulation comprising the conjugate at a total molar amount that is the sum of the first and second molar amounts.
- a low-viscosity therapeutically acceptable composition of a protein conjugate comprising a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the composition has reduced viscosity and/or an enhanced injectability compared to a reference composition comprising the conjugate at a total molar amount that is the sum of the first and second molar amounts.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the second protein is present in the formulation at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has a reduced turbidity compared to a reference formulation comprising the first molar amount of the conjugate and the second molar amount of the second protein at a pH about the same as (e.g., within 0.05, 0.1, 0.15, 0.2, 0.3, 0.4, or 0.5 pH units of) the p
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has a reduced turbidity compared to a reference composition comprising the second protein at the percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the reference composition, at a pH about the same as, or within 0.05, 0.1, 0.15, 0.2, 0.3, 0.4, or 0.5 pH units of the pI of the second protein.
- a pharmaceutical formulation comprising: a first molar amount of a conjugate comprising a protein conjugated to a phosphorylcholine-containing polymer; a second molar amount the protein that is not conjugated to the phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the protein that is not conjugated to the phosphorylcholine-containing polymer at about 1% or more of a total molar amount of the conjugate and unconjugated proteins, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the protein, wherein the formulation is substantially free of turbidity.
- pI isoelectric point
- a formulation comprising: a phosphorylcholine-containing polymer present in the formulation at 100 mg/mL or higher; and a protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the protein is present in the formulation at a second molar amount, wherein the protein is present in the formulation at about 1% or more of a total molar amount of the polymer and the protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about the same as (e.g., within 0.05, 0.1, 0.15, 0.2, 0.3, 0.4, or 0.5 pH units away or more from) the isoelectric point (pI) of the protein. 12.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the difference between the pI of the second protein and the pH of the formulation in the acidic or basic direction is selected to be greater than the minimum difference in the corresponding acidic or basic direction between the pI of the second protein and the pH for a reference formulation comprising: a third molar amount of the conjugate comprising the first protein conjugated to the phosphorylcholine-containing polymer; a fourth molar amount of the second protein that is not conjugated to the phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein a first total molar amount comprising a sum of the first molar amount and the second molar amount, and a second total molar amount comprising a sum of the third m
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the difference between the pI of the second protein and the pH of the formulation is selected to be greater than the minimum difference between the pI of the second protein and the pH for a reference formulation comprising: the conjugate comprising the first protein conjugated to the phosphorylcholine- containing polymer; the second protein that is not conjugated to the phosphorylcholine-containing polymer; and the pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is higher than the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the reference composition, wherein the reference composition is substantially free of turbidity.
- the formulation or composition of any one of the preceding arrangements wherein the formulation is substantially free of turbidity. 19. The formulation or composition of any one of the preceding arrangements, wherein the formulation has a viscosity of about 1,000 mPa.s or less. 20. The formulation or composition of any one of the preceding arrangements, wherein the formulation has a polydispersity index (PDI) of about 1.2 or less. 21.
- PDI polydispersity index
- the formulation or composition of any one of the preceding arrangements or arrangements 54-72 wherein the formulation comprises the second protein at any one of the following percentages of the total molar amount of the conjugate and the second protein: about 2%, about 5%, about 10%, about 15%, about 20%, about 25%, about 30%, about 35%, about 40%, about 50%, about 60%, about 70%, about 80%, or about 90%. 22.
- a ratio of the molecular weight of the second protein to the polymer in the formulation is at least 1:2.
- phosphorylcholine-containing polymer comprises 2- (methacryloyloxyethyl)-2'-(trimethylammonium)ethyl phosphate (MPC) monomers as set forth below:
- any one of the preceding arrangements or arrangements 54-72 wherein the protein, first protein and/or second protein is an anti-VEGF antibody, a fusion construct comprising a VEGF Trap fused to the heavy chain of an anti-IL-6 antibody, an IL-6 antibody, a fusion construct comprising a PDGFR extracellular trap fused to the heavy chain of an anti-VEGF-A antibody, a VEGF trap-Fc fusion protein, an anti-HTRA1 antibody, or an anti-complement factor D (CFD) antibody.
- the first protein and/or second protein is the anti-VEGF antibody. 38.
- the formulation or composition of arrangement 37 wherein the first protein is a first anti-VEGF antibody and the second protein is a second anti-VEGF antibody, wherein the first and second anti-VEGF antibodies comprise different complementarity determining region (CDR) sequences.
- the first protein is a first anti-VEGF antibody and the second protein is a second anti-VEGF antibody, wherein the first and second anti-VEGF antibodies comprise the same complementarity determining region (CDR) sequences.
- the formulation or composition of arrangement 37, wherein the anti-VEGF antibody comprises: a CDR H 1 that is the CDR H 1 in SEQ ID NO: 1; a CDRH2 that is the CDRH2 in SEQ ID NO: 1; a CDRH3 that is the CDRH3 in SEQ ID NO: 1; a CDRL1 that is the CDRL1 in SEQ ID NO: 2; a CDRL2 that is the CDRL2 in SEQ ID NO: 2; and a CDR L 3 that is the CDR L 3 in SEQ ID NO: 2.
- the anti-VEGF antibody comprises: a heavy chain comprising a complementarity determining region 1 (CDR H 1): GYDFTHYGMN (SEQ ID NO: 9), CDR H 2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11); and a light chain comprising CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDRL2: FTSSLHS (SEQ ID NO: 13), and CDRL3: QQYSTVPWT (SEQ ID NO: 14).
- the formulation or composition of arrangement 36, wherein the first protein and/or second protein is the fusion construct comprising a VEGF Trap fused to the heavy chain of an anti-IL-6 antibody.
- the fusion construct comprises: a CDR H 1 that is the CDR H 1 in SEQ ID NO: 105; a CDR H 2 that is the CDR H 2 in SEQ ID NO: 105; a CDR H 3 that is the CDR H 3 in SEQ ID NO: 105; a CDR L 1 that is the CDR L 1 in SEQ ID NO: 106; a CDRL2 that is the CDRL2 in SEQ ID NO: 106; and a CDRL3 that is the CDRL3 in SEQ ID NO: 106. 47.
- the formulation or composition of arrangement 45 wherein the fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDR H 1): PFAMH (SEQ ID NO: 134, CDR H 2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDR H 3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDR L 1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDRL3: QQWSGYPYT (SEQ ID NO: 139).
- the formulation or composition of arrangement 50, wherein the cysteine is Q347C (EU numbering) or L443C (EU numbering).
- the formulation or composition of any one of arrangements 49-51, wherein the conjugate comprises the following structure:
- each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is bonded to the heavy chain of the conjugate through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains;
- PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any halogen, including –Br, –Cl, or –I, d) –SCN, or e) – NCS; and n1, n2, n3, n4, n5, n6, n7, n8 and n9 are the same or different such that the sum of n1, n2, n3, n4, n5, n6, n7, n8 and
- the pharmaceutically acceptable carrier comprises a buffer comprising a buffering agent having a pKa that is within about 1 pH unit of the pH of the formulation.
- the pharmaceutically acceptable carrier comprises a buffer selected from: acetate, phosphate, glycine, histidine, HEPES, and Tris. 55.
- a formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the first protein and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more.
- a therapeutically acceptable composition comprising: a first molar amount of a conjugate comprising a first protein conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the first protein and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a formulation comprising: a first molar amount of a first protein that is conjugated to a polymer; and a second molar amount of a second protein that is not conjugated to a polymer, the further improvement comprising: the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a first protein that is conjugated to a polymer; and a second protein that is not conjugated to a polymer, the further improvement comprising: the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more.
- a formulation comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein a first molar amount of the conjugate and a second molar amount of the second protein has been combined in the formulation such that the second molar amount is about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein a first molar amount of the conjugate and a second molar amount of the second protein has been combined in the composition such that the second molar amount is about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a therapeutically acceptable composition comprising: a conjugate comprising a first protein conjugated to a polymer; and a second protein that is not conjugated to a polymer, wherein the second protein at a percent composition relative to the total protein mass weight concentration of the first protein and the second protein in the composition of about 1% or more has been combined with the conjugate, wherein the remainder of the total protein mass weight concentration comprises the first protein.
- 64. The formulation of arrangement 61 or the composition of arrangement 62, wherein the second molar amount is about 5-50% of the total molar amount of the conjugate and the second protein.
- 65 The formulation or composition of any one of arrangements 57-64, wherein the polymer is a phosphorylcholine-containing polymer.
- a formulation comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer, wherein the polymer has 9 arms and a molecular weight of between 600,000 and 1,000,000 Da, wherein the polymer is present in the formulation at about 100 mg/mL or more; and a second protein that is not conjugated to a polymer, wherein the second protein is present in the formulation at 5-15 mg/mL.
- 67 The formulation or composition of any one of arrangements 55-66, wherein the first and second proteins are a therapeutic protein.
- the formulation or composition of any one of arrangements 55-67, wherein the first protein and second protein are the same. 69.
- An intraocular therapeutic composition comprising an anti-VEGF-A antibody at about 50 mg/mL of protein, the anti-VEGF-A antibody comprising: a heavy chain comprising a complementarity determining region 1 (CDRH1): GYDFTHYGMN (SEQ ID NO: 9), CDRH2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDRH3: YPYYYGTSHWYFDV (SEQ ID NO: 11); and a light chain comprising CDR L 1: SASQDISNYLN (SEQ ID NO: 12), CDR L 2: FTSSLHS (SEQ ID NO: 13), and CDR L 3: QQYSTVPWT (SEQ ID NO: 14), wherein the anti-VEGF-A antibody is present in the composition as either an antibody conjugate or unconjugated antibody, wherein the unconjugated antibody is present in the
- An intraocular therapeutic composition comprising an anti-VEGF-A antibody at about 50 mg/mL of protein, the anti-VEGF-A antibody comprising: a heavy chain comprising an amino acid sequence of SEQ ID NO: 1 (with or without the C-terminal lysine); and a light chain comprising an amino acid sequence of SEQ ID NO: 2, wherein the anti-VEGF-A antibody is present in the composition as either an antibody conjugate or unconjugated antibody, wherein the unconjugated antibody is present in the formulation at between about 10% to about 30% of a total molar amount of the antibody conjugate and the unconjugated antibody, wherein the total molar amount is the sum of the molar amount of the antibody conjugate and the molar amount of the unconjugated antibody, wherein the antibody conjugate comprises the following structure:
- each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is bonded to the heavy chain of the conjugate through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains;
- PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any halogen, including –Br, –Cl, or –I, d) –SCN, or e) – NCS; and n1, n2, n3, n4, n5, n6, n7, n8 and n9 are the same or different such that the sum of n1, n2, n3, n4, n5, n6, n7, n8 and
- An intraocular therapeutic composition comprising a fusion construct at about 53 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising an amino acid sequence of SEQ ID NO:105 (with or without the C-terminal lysine); and a light chain comprising an amino acid sequence of SEQ ID NO:106, wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to about 40% of a total molar amount of the conjugate and the unconjugated fusion construct, wherein the total molar amount is the sum of the molar amount of the conjugate and the molar amount of the unconjugated fusion construct, wherein the conjugate comprises the fusion construct conjugated to a phosphorylcholine-containing polymer, wherein the phosphorylcholine-containing polymer is
- An intraocular therapeutic composition comprising a fusion construct at about 50 mg/mL of protein, the fusion construct comprising a VEGF trap fused to an anti-IL-6 antibody, wherein the fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDR H 1): PFAMH (SEQ ID NO: 134), CDR H 2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDRH3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDRL1: SASISVSYLY (SEQ ID NO: 137), CDRL2: DDSSLAS (SEQ ID NO: 138), and CDRL3: QQWSGYPYT (SEQ ID NO: 139), wherein the fusion construct is present in the composition as either a conjugate or an unconjugated fusion construct, wherein the unconjugated fusion construct is present in the formulation at between about 20% to about 40% of a total
- a method of preparing a formulation comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- pI isoelectric point
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- a method of preparing a formulation comprising adjusting the pH of a formulation to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the formulation, wherein the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the unconjugated protein, wherein the unconjugated protein is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the unconjugated protein at about 1% or more of a total molar amount of the conjugate and the unconjugated protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the formulation comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the unconjugated
- the method of arrangement 78 further comprising: providing an initial formulation comprising the conjugate; combining in a second formulation the second protein that is not conjugated to a phosphorylcholine-containing polymer with the conjugate; and adjusting the pH of the initial and/or second formulation to be about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, to thereby prepare the formulation comprising the conjugate at the first molar amount and the second protein at the second molar amount.
- pI isoelectric point
- a method of preparing a therapeutically acceptable composition comprising adjusting the pH of a composition to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the composition, wherein the composition comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the unconjugated protein, wherein the unconjugated protein is not conjugated to a phosphorylcholine-containing polymer, wherein the composition comprises the unconjugated protein at about 0.1% or more of a total molar amount of the conjugate and the unconjugated protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- the composition comprises: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the uncon
- a method of preparing a therapeutically acceptable composition comprising adjusting the pH of a therapeutically acceptable composition to be about 0.5 pH units away or more from the isoelectric point (pI) of an unconjugated protein comprised in the composition, wherein the composition comprises: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein.
- the composition comprises: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein relative to the total protein mass weight concentration of
- the method of arrangement 81 further comprising providing an initial composition comprising the conjugate; combining in a second composition the second protein that is not conjugated to a phosphorylcholine-containing polymer with the conjugate; and adjusting the pH of the initial and/or second composition to be about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, to thereby prepare the composition comprising the conjugate at the first molar amount and the second protein at the second molar amount.
- pI isoelectric point
- adjusting the pH comprises substituting a buffering system of the formulation, wherein the buffering system is substituted to a buffering system that buffers at a pH that is about 0.5 pH units or more away from the pI of the protein.
- adjusting the pH of the formulation reduces turbidity of the formulation.
- the method of any one of arrangements 75-85, wherein the turbidity of the formulation before adjusting the pH is about 700 NTU or more, as measured at OD 600 nm and calibrated against a 4000 NTU Formazin calibration standard. 87.
- any one of arrangements 75-86 or arrangements 128-133 comprising preparing the first protein conjugated to the phosphorylcholine-containing polymer by conjugating the first protein to the phosphorylcholine-containing polymer.
- conjugating the first protein to the phosphorylcholine-containing polymer comprises allowing a sulfhydryl-specific reacting group comprised in the phosphorylcholine-containing polymer to react with a cysteine residue in the first protein.
- a method of preparing a low-viscosity formulation of a protein conjugated to a phosphorylcholine-containing polymer comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of the protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the protein that is not conjugated to the phosphorylcholine-containing polymer at about 1% or more of a total molar amount of the conjugate unconjugated proteins, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the formulation has reduced viscosity and/or an enhanced injectability compared to a reference formulation comprising the conjugate at the total molar amount.
- pI is
- a method of preparing a low-viscosity therapeutically acceptable composition of a protein conjugated to a phosphorylcholine-containing polymer comprising combining in a therapeutically acceptable composition: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more, wherein the composition has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the composition has reduced viscosity and/or an enhanced injectability compared to a reference composition comprising the conjugate, wherein the first protein of the conjugate is present in the reference composition at the total mass weight concentration of the first and second proteins in the composition.
- a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer
- any one of arrangements 75-95 or arrangements 128-133 wherein the formulation comprises the unconjugated protein at any one of the following percentages of the total molar amount of the conjugate and the unconjugated protein: about 5%, about 10%, about 15%, about 20%, about 25%, about 30%, about 35%, about 40%, about 50%, about 60%, about 70%, about 80%, or about 90%.
- the formulation comprises the unconjugated protein at between about 5% to about 50% of the total molar amount of the conjugate and the second protein.
- MPC 2-(methacryloyloxyethyl)-2'- (trimethylammonium)ethyl phosphate (MPC) monomers as set forth below: .
- MPC 2-(methacryloyloxyethyl)-2'- (trimethylammonium)ethyl phosphate
- the method of any one of arrangements 75-107 or arrangements 128-133, wherein the phosphorylcholine-containing polymer comprises three or more arms or is synthesized with an initiator comprising 3 or
- the first protein is a first anti-VEGF antibody and the unconjugated protein is a second anti-VEGF antibody, wherein the first and second anti-VEGF antibodies comprise different complementarity determining region (CDR) sequences.
- CDR complementarity determining region
- first protein is a first anti-VEGF antibody and the unconjugated protein is a second anti-VEGF antibody, wherein the first and second anti-VEGF antibodies comprise the same complementarity determining region (CDR) sequences.
- CDR complementarity determining region
- the anti-VEGF antibody comprises: a CDR H 1 that is the CDR H 1 in SEQ ID NO: 1; a CDR H 2 that is the CDR H 2 in SEQ ID NO: 1; a CDRH3 that is the CDRH3 in SEQ ID NO: 1; a CDRL1 that is the CDRL1 in SEQ ID NO: 2; a CDRL2 that is the CDRL2 in SEQ ID NO: 2; and a CDRL3 that is the CDRL3 in SEQ ID NO: 2.
- a CDR H 1 that is the CDR H 1 in SEQ ID NO: 1
- a CDR H 2 that is the CDR H 2 in SEQ ID NO: 1
- a CDRH3 that is the CDRH3 in SEQ ID NO: 1
- a CDRL1 that is the CDRL1 in SEQ ID NO: 2
- a CDRL2 that is the CDRL2 in SEQ ID NO: 2
- a CDRL3 that is the CDRL3 in SEQ ID NO: 2.
- the anti-VEGF antibody comprises: a heavy chain comprising a complementarity determining region 1 (CDR H 1): GYDFTHYGMN (SEQ ID NO: 9), CDR H 2: WINTYTGEPTYAADFKR (SEQ ID NO: 10), and CDR H 3: YPYYYGTSHWYFDV (SEQ ID NO: 11); and a light chain comprising CDRL1: SASQDISNYLN (SEQ ID NO: 12), CDRL2: FTSSLHS (SEQ ID NO: 13), and CDRL3: QQYSTVPWT (SEQ ID NO: 14).
- CDRL1 SASQDISNYLN
- CDRL2 FTSSLHS
- CDRL3 QQYSTVPWT
- 118. The method of any one of arrangements 111-117 or arrangements 128-133, wherein the unconjugated protein is the anti-VEGF Fab.
- 119. The method of any one of arrangements 111-118 or arrangements 128-133, wherein the unconjugated protein is an anti-VEGF antibody selected from bevacizumab, ranibizumab, brolucizumab, faricimab, or is aflibercept. 120.
- the fusion construct comprises: a CDR H 1 that is the CDR H 1 in SEQ ID NO: 105; a CDR H 2 that is the CDR H 2 in SEQ ID NO: 105; a CDR H 3 that is the CDR H 3 in SEQ ID NO: 105; a CDR L 1 that is the CDR L 1 in SEQ ID NO: 106; a CDRL2 that is the CDRL2 in SEQ ID NO: 106; and a CDRL3 that is the CDRL3 in SEQ ID NO: 106.
- fusion construct comprises: a heavy chain comprising a complementarity determining region 1 (CDR H 1): PFAMH (SEQ ID NO: 134), CDR H 2: KISPGGSWTYYSDTVTD (SEQ ID NO: 135), and CDR H 3: QAWGYYALDI (SEQ ID NO: 136); and a light chain comprising CDR L 1: SASISVSYLY (SEQ ID NO: 137), CDR L 2: DDSSLAS (SEQ ID NO: 138), and CDR L 3: QQWSGYPYT (SEQ ID NO: 139).
- CDR H 1 SASISVSYLY
- CDR L 2 DDSSLAS
- QQWSGYPYT SEQ ID NO: 139
- 124. The method of any one of arrangements 75-123, wherein the conjugate comprises a heavy chain and a light chain.
- 126. The method of arrangement 125, wherein the cysteine is Q347C (EU numbering) or L443C (EU numbering).
- the method of any one of arrangements 124-126, wherein the conjugate comprises the following structure:
- each heavy chain of the conjugate is denoted by the letter H, and each light chain of the conjugate is denoted by the letter L; the polymer is bonded to the heavy chain of the conjugate through the sulfhydryl of C443 (EU numbering), which bond is depicted on one of the heavy chains;
- PC is , where the curvy line indicates the point of attachment to the rest of the polymer, where X is a) –OR where R is –H, methyl, ethyl, propyl, isopropyl, b) –H, c) any halogen, including –Br, –Cl, or –I, d) –SCN, or e) – NCS; and n1, n2, n3, n4, n5, n6, n7, n8 and n9 are the same or different such that the sum of n1, n2, n3, n4, n5, n6, n7, n8 and
- a method of preparing a formulation comprising combining in a formulation: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the composition comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount.
- a method of preparing a therapeutically acceptable composition comprising combining in a therapeutically acceptable composition: a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer; and a second protein that is not conjugated to a phosphorylcholine-containing polymer, wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more.
- a conjugate comprising a first protein conjugated to a phosphorylcholine- containing polymer
- a second protein that is not conjugated to a phosphorylcholine-containing polymer wherein the percent composition of the second protein relative to the total protein mass weight concentration of the first protein and the second protein in the composition is about 1% or more.
- a method of treating a subject comprising: intraocularly administering a therapeutically effective amount of a low- viscosity formulation to a subject in need thereof, wherein the formulation comprises: a first concentration of a conjugate comprising a first anti-VEGF antibody conjugated to a phosphorylcholine-containing polymer; a second concentration of an anti-VEGF agent that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the anti-VEGF agent.
- pI isoelectric point
- the subject has an ocular disease selected from: diabetic retinopathy, choroidal neovascularization (CNV), age- related macular degeneration (AMD), diabetic macular edema (DME), pathological myopia, von Hippel-Lindau disease, histoplasmosis of the eye, central retinal vein occlusion (CRVO), branched central retinal vein occlusion (BRVO), corneal neovascularization, retinal neovascularization, retinopathy of prematurity (ROP), subconjunctival hemorrhage, and hypertensive retinopathy.
- CNV choroidal neovascularization
- AMD age-related macular degeneration
- DME diabetic macular edema
- pathological myopia von Hippel-Lin
- a kit comprising: a pre-filled syringe comprising a low-viscosity formulation comprising: a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; and a second protein that is not conjugated to a phosphorylcholine- containing polymer; and a syringe needle for injection of the low-viscosity formulation, wherein the gauge of the needle is 27 or higher.
- the kit of arrangement 139, wherein the low-viscosity formulation is the formulation or composition of any one arrangements 1-74, or is made by the method of any one of arrangements 75-133.
- arrangement 141 or 142 wherein the subject has an ocular disease selected from: diabetic retinopathy, choroidal neovascularization (CNV), age-related macular degeneration (AMD), diabetic macular edema (DME), pathological myopia, von Hippel- Lindau disease, histoplasmosis of the eye, central retinal vein occlusion (CRVO), branched central retinal vein occlusion (BRVO), corneal neovascularization, retinal neovascularization, retinopathy of prematurity (ROP), subconjunctival hemorrhage, and hypertensive retinopathy.
- CNV central retinal vein occlusion
- BRVO branched central retinal vein occlusion
- corneal neovascularization retinal neovascularization
- ROP retinopathy of prematurity
- ROP subconjunctival hemorrhage
- hypertensive retinopathy selected from: diabetic
- composition or formulation or method of any one of the preceding arrangements wherein the pI is a theoretically determined pI. 145.
- the composition or formulation or method of any one of the preceding arrangements wherein the pI is an empirically determined pI. 146.
- the composition or formulation or method of any one of the preceding arrangements wherein the composition or formulation comprises polysorbate 20.
- the composition or formulation comprises about 0.01-0.05% (w/w) polysorbate 20.
- pharmaceutically acceptable carrier is acceptable for administering directly into an eye of a patient. 149.
- composition or formulation or method of any one of the preceding arrangements wherein the first protein comprises any one of the amino sequences or a combination thereof set forth in SEQ ID NOs: 1-6, 15-133, 156-161 or Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs. 12-17, 54, 55A, and 55B.
- the second protein comprises any one of the amino sequences or a combination thereof set forth in SEQ ID NOs: 1-6, 15-133, 156-161 or Tables 0.1, 0.2, 0.3, 0.4, 0.5, 0.6 and 0.7, and Figs. 12-17, 54, 55A, and 55B.
- a formulation comprising about 40 to about 60 mM sodium acetate, about 0.01% to about 0.04% polysorbate 20, about 40 to about 60 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 15% to about 25% OG1950 and about 75% to about 85% OG1953 by molar amount, at pH about 4.5 to about 5.5. 152.
- a formulation comprising, consisting of, or consisting essentially of, about 50 mM sodium acetate, about 0.025% polysorbate 20, about 50 mg/mL (total protein concentration) of a mixture of OG1950 and OG1953, the mixture containing about 20% OG1950 and about 80% OG1953 by molar amount, at about pH 5. 153.
- a method of storing a protein comprising maintaining a protein in a formulation for at least 2 months and up to 2 years, the formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second molar amount of a second protein that is not conjugated to a phosphorylcholine-containing polymer; and a pharmaceutically acceptable carrier, wherein the formulation comprises the second protein at about 1% or more of a total molar amount of the conjugate and the second protein, wherein the total molar amount comprises a sum of the first molar amount and the second molar amount, wherein the formulation has a pH that is about 0.5 pH units away or more from the isoelectric point (pI) of the second protein, wherein the protein comprises an antibody or a fusion construct.
- the formulation comprising: a first molar amount of a conjugate comprising a first protein conjugated to a phosphorylcholine-containing polymer; a second
- the tube was refilled under Argon and the catalyst (CuBr unless otherwise indicated), kept under Argon, was introduced into the Schlenck tube (the Molar ratio of atom bromine on the initiator/catalyst (CuBr)/ligand was kept at 1/1/2). The solution became dark brown immediately.
- the Schlenk tube was sealed and immediately purged by applying a short cycle vacuum/Argon.
- a solution of HEMA-PC was prepared by mixing a defined quantity of monomer, prepared in a glovebox kept under nitrogen, with 200 proof degassed ethanol. The monomer solution was added drop wise into the Schlenk tube (via cannula) (and homogenized by light stirring). The temperature was maintained at -78°C.
- the filtrate is removed for analysis while the retentate is diluted and mixed with water ( ⁇ 10 mL/tube).
- the centrifuge procedure is repeated 5 more times, after which the retentate is removed and placed into a vial.
- the Amicon membrane tubes were rinsed with water (2 x ⁇ 2 mL each tube) and this combined with the retentate.
- the retentate solution was filtered through a syringe filter (Acrodisc Supor, PN 4612), frozen and placed on a lyophilizer. This resulted in 485 mgs as a white powder.
- Example 2 Example 2.
- OG1786 is the nine-arm initiator for polymer synthesis used as a precursor in the synthesis of OG1802. Each arm is terminated with a 2-bromoisobutyrate which is capable of initiating polymerization under ATRP.
- OG1786 is a salt of trifluoro acetic acid (TFA) as shown in FIG. 4.
- OG1786 is prepared as follows. First, OG1550 is reacted with TFA (trifluoro acetic acid) to produce OG1546 as depicted in FIG.5.
- TFA trifluoro acetic acid
- the mixture was stirred (after removal from the ice bath) for a further 4-5 hours, until tlc showed ⁇ 5% starting material remaining, and the pH of the aqueous was between 3 and 4 (pH paper).
- the mixture was partitioned. The MTBE layer was washed with water (30 ml). Combine aqueous layers then the aqueous extracted with MTBE (150 ml). This second MTBE phase was washed with water (30 ml). The combined aqueous layers were washed with a third portion of MTBE (100 ml). The third MBTE phase was washed with water (25 ml). The aqueous layers were again combined ( ⁇ 250 ml, pH ⁇ 4, by pH paper).
- reaction showed very light yellow/tan color.
- the reaction was cooled again in an ice bath and 5 ml water added. The mixture was then removed from the cooling bath and a further 50 ml water portion added, followed by 50 ml 0.5 M citric acid then isopropylacetate (300 ml). The mixture was partitioned. The aqueous phase ( ⁇ 300 ml) was extracted with additional isopropyl acetate (150 ml). The aqueous phase was AQ1 for HPLC test.
- the combined organics were washed with aqueous citric acid (115 ml, 65 mM, which was the mixture of 15 ml of 0.5 M citric acid plus 100 ml water), and the aqueous phase was AQ2 (pH ⁇ 3).
- the organic phase was washed with water/saturated sodium chloride (100 ml/25 ml), and the aqueous phase was AQ3 (pH ⁇ 3).
- the organic phase was finally washed with saturated sodium chloride (100 ml), and the aqueous phase was AQ4. None of the AQ fractions contained any significant product (data not provided).
- the organic phase confirmed the product via LCMS.
- the product was dried over sodium sulfate (80 g), filtered and rinsed with isopropyl acetate (75 ml), and concentrated on a rotary evaporator to a tan oil (33.2 g).
- the crude was stored overnight under nitrogen. [0507] The next day the crude was allowed to come to room temperature, then dissolved in acetonitrile/water (46 ml/12 ml) and filtered using an HPLC filter disk (Cole- Parmer PTFE 0.2 ⁇ m, product number 02915-20). The filtrate was split into three equal portions and purified in three runs.
- OG1801 has an amine functionality, which is more stable (than maleimide) during polymer synthesis.
- ATRP a modified version of ATRP is used wherein the copper species (Cu(I)) is generated in situ by adding metallic copper to Cu (II).
- Starting materials and reagents needed in the reaction are calculated based on batch input of the monomer (HEMA-PC) OG47, as well as the targeted molecular weight (MW).
- HEMA-PC monomer
- MW targeted molecular weight
- the linker is 3-maleimidopropionic acid, NHS ester.
- OG1802 (see FIG. 10) is then purified as follows: Millipore TFF cassettes are used for polymer purification in aqueous system. Started with concentrating the polymer solution to 250 mL ( ⁇ 200 mg/mL). Added the fresh WFI from reservoir and adjusted the flow rate of the fresh WFI feed to the same as the permeate ( ⁇ 2mL/min). The UF/DF was set up at 2-8 °C overnight. Typically 2.5 L of WFI was used (10x volume ratio to the polymer solution). A sample of retentate was collected for purity test. The targeted purity was > 98%. Filtered the polymer solution by 0.2 ⁇ M 1L filter bottle.
- HEA-PC (2- (acryloyloxy)ethyl-2-(trimethylammonium)ethyl phosphate), which is an acrylate as opposed to the methacrylate HEMA-PC described above, has the following structure: HEA-PC [0522] HEA-PC was polymerized to the initiator shown in Example 1 as compound L.
- maleimide functionality was added to the polymer so that it could be conjugate to a protein.
- the maleimide Mal-PEG4-PFP (see Example 1 above) ester was snapped on to the HEA-PC polymer as shown in Example 1.
- the resulting maleimide functionalized HEA-PC polymer can then be conjugated to sulfhydryl groups as discussed herein for HEMA-PC polymers.
- An acrylamide PC polymer was also made using the monomer 2- (acrylamyl)ethyl-2-(trimethylammonium)ethyl phosphate (Am-PC), having the following structure: [0527]
- the Am-PC was used for polymerization employing a 3 arm initiator (a TFA salt) having the structure: [0528]
- the synthesis of the Am-PC polymer was conducted as follows: TABLE 5.2 [0529] A stock solution of ligand at 200mg/mL was prepared by dissolving 9 mg of Me6TREN in 45uL of dry DMF. Add 19.7uL of the stock solution to a reaction vessel.
- the Am-PC polymer may be dialyzed.
- the molecular weight of the above polymer was determined by SEC/MALS: Mn is 215kDa, Mp: 250kDa, PDI is 1.17. Conversion was estimated by 1H NMR to be 94%.
- a maleimide functionality can be added to the Am-PC polymer as discussed above for HEMA-PC and HEA-PC. Maleimide functionalized Am-PC polymer can be conjugated to a protein as described above. Example 6.
- an Ellman’s assay was used to determine the amount of functional maleimide (i.e. conjugatable) in a sample.
- a standard curve was established with cysteine. Since the maleimide reacts with thiol, this assay measured the thiol (cysteine) left.
- Example 7 Protein Sequence of antibody (OG1950) comprising an anti-VEGF-A antibody heavy chain with an L443C (EU numbering, or 449C in SEQ ID NO: 1) mutation and an anti- VEGFA-antibody light chain [0533] An anti-VEGF-A antibody with an L443C (EU numbering) mutation having the sequence set forth below in SEQ ID NO: 1 (FIG.12) (heavy chain) was cloned. An anti-VEGF-A antibody light chain having the sequence set forth in SEQ ID NO: 2 (FIG. 13) below was cloned.
- Example 8a Protein Sequence of antibody (OG1950) comprising an anti-VEGF-A antibody heavy chain with an L443C (EU numbering, or 449C in SEQ ID NO: 1) mutation and an anti- VEGFA-antibody light chain [0533] An anti-VEGF-A antibody with an L443C (EU numbering) mutation having the sequence set forth below in SEQ ID NO: 1 (FIG.12
- the OG1950 heavy and light chains may be cloned into expression plasmids and transfected into CHO cells. Cells can be grown up in appropriate media and harvested. OG1950 may be purified using techniques described above. The OG1950 cysteine at position 443 (L443C (EU numbering)) residue is typically “capped” or oxidized by chemicals in the cell culture media and is not available for conjugation. In this regard, purified OG1950 may be subjected to a decapping (i.e. reducing) procedure to remove the cap and enable the free (i.e.
- a decapping i.e. reducing
- Decapping may be done by mixing purified OG1950 protein with a 30x molar excess for 1 hour at 25°C of the reducing agent TCEP (3,3 ⁇ ,3 ⁇ -Phosphanetriyltripropanoic acid). The reduction reaction with TCEP may be monitored by SDS-PAGE. Following denaturation, the OG1950 protein may be washed by TFF using a Pellion XL Ultrafiltration Cassette with 20mM Tris pH7.5, 150mM NaCl, 0.5mM TCEP buffer to remove the cap.
- the TCEP reagent may then be removed in the same TFF setup with 20mM Tris pH7.5, 150mM NaCl. Reduced OG1950 may then be allowed to refold using air (ambient oxygen) which again is followed by SDS-PAGE as an assay.
- Example 8b. Purification and Decapping of OG1950 [0535] The OG1950 heavy and light chains may be cloned into expression plasmids and transfected into CHO cells. Cells can be grown up in appropriate media and harvested. OG1950 may be purified using techniques described above.
- the OG1950 cysteine at position 443 (L443C (EU numbering)) residue is typically “capped” or oxidized by chemicals in the cell culture media and is not available for conjugation.
- purified OG1950 may be subjected to a decapping (i.e. reducing) procedure to remove the cap and enable the free (i.e. those not involved in Cys-Cys disulfide bonds) cysteine residue to be conjugated to the maleimide functionality of a polymer.
- Decapping may be done by mixing purified OG1950 protein with a 30x molar excess for 1 hour at 25°C of the reducing agent TCEP (3,3 ⁇ ,3 ⁇ -Phosphanetriyltripropanoic acid).
- the reduction reaction with TCEP may be monitored by SDS-PAGE.
- the OG1950 protein can be washed by TFF using a Pellicon XL Ultrafiltration Cassette with 30 kDa MWCO membrane from Millipore with 20mM Tris pH 7.5, 150mM NaCl, 0.5mM TCEP buffer to remove the cap and the excess TCEP by using the same buffer without TCEP.
- Reduced OG1950 can then be allowed to reoxidize using DHAA at ambient temperature for 1 hour followed by TFF for removal of DHAA to form reoxidized decapped OG1950.
- the decapping status is monitored by SDS- PAGE assay.
- Conjugation of OG1950 to MPC Polymer [0536] Reoxidized decapped OG1950 may then be conjugated to polymer OG1802. An excess of OG1802 is used (at least 1x molar excess). Conjugation can be monitored by SDS-PAGE or Cation-exchange chromatography (CEX-HPLC) and driven to near completion. OG1953 conjugate may be purified via cation exchanger chromatography and buffer exchanged into the formulation buffer by TFF. OG1953 conjugate may be purified chromatographically as described above. [0537] Conjugation efficiency is monitored with CEX-HPLC as follows. OG1950 and OG1953 conjugate at pH 5 are protonated and bound to a CEX column.
- the polymer shields the protein charge and results in weaker binding to CEX as compared to the unconjugated OG1950 protein and elutes at a lower conductivity.
- the OG1802 polymer is net charge neutral and is not bound to the column. Reduction of the OG1950 protein peak and OG1802 polymer peak with the appearance and increase in the conjugate peak indicates conjugation. Near complete absence of the OG1950 peak indicates a quantitative conjugation event.
- Example 10. OG1950 SPR Binding Kinetics [0538] This Example illustrates binding of OG1950 to VEGF-165 in single cycle kinetics BIAcoreTM experiment.
- VEGF-165 recombinant human VEGF-165 (R&D Systems) was applied at various concentrations with a pulse of 60 s at a flow rate of 30 ⁇ l/min and a final dissociation time of 1000 s.
- the experiment was carried out at 25°C.
- the surface was regenerated with 10 mM glycine pH 1.7 for 1 min at a flow rate of 50 ⁇ L/min.
- Binding kinetics analysis was performed using the Biacore T200 evaluation software with responses globally fit to a 1:1 interaction. Results are summarized in Table 10.1 and FIG.21. TABLE 10.1.
- OG1950 protein expression and protein preparation OG1950 protein was expressed in mammalian GSCHOK1 expression system followed by purification using a Protein A affinity column. The purity of the Protein A column purified OG1950 was over 90% based on size exclusion chromatography and SDS-PAGE. The engineered specific cysteine residue of OG1950 was available for thiol conjugation to the OG1802 biopolymer.
- the thiol reacting chemical group of OG1802 was to react to form stable covalent linkage, which forms the OG1953 bioconjugate.
- 1 mg of OG1950 was fully reduced with Tris- (2-Carboxyethyl)phosphine, Hydrochloride (TCEP) reducing agent followed by removal of TCEP via buffer exchange using a 30KDa spin concentrator.
- TCEP Tris- (2-Carboxyethyl)phosphine, Hydrochloride
- the fully reduced OG1950 protein was then allowed to reoxidize to ensure all expected protein disulfide linkage was formed except the engineered cysteine residue (decap OG1950), which remained in a reduced form for conjugation to the biopolymer via thiol specific conjugation chemistry.
- Conjugation reaction The conjugation reactions were performed by mixing 100ug of decap OG1950 with 15x molar excess of OG1802 biopolymer with final protein concentration at 2 mg/mL in Tris buffer (20mM Tris, 100mM NaCl, pH 7.5). Various additives were evaluated in different conjugation reactions as shown in Table 11.1. in order to compare their impact on the conjugation efficiency. All reactions were set up in a fixed volume and incubated at 4°C for 20 hours. Table 11.1 and Figure 19 shows ion Exchanger analysis (A280 absorbance) and fractionation of the conjugation reactions A through G.
- Reactions B-G were started with 100ug OG1950 protein input with a fixed total reaction volume. Upon reaction completion, equal volumes of B-G reactions were injected for IEX analysis. The conjugation efficiency comparison is shown in Figure 19.
- Peak 1(P1) represents the excess biopolymer (OG1802) that was not conjugated to the protein and unable to bind to the ion exchanger column and therefore eluted as unbound fraction in each reaction; Peak 2 (P2) represents the antibody polymer bioconjugate in each reaction; Peak 3 (P3) represents the free antibody that was not conjugated to the polymer in each reaction.
- Cation exchanger analysis of the OG1953 conjugation reaction Upon conjugation reaction completion, 5ul of each reaction mixture was diluted 3-fold with a column equilibration buffer (20mM sodium acetate pH 5.5) for cation exchanger chromatography (IEX) analysis and separation using a Shodex SP-825 HPLC column. IEX was performed under bind and elution mode where the reaction mixture was first diluted to lower the salt concentration so both conjugate and unreacted protein would bind to the column, followed by a salt gradient elution where increasing NaCl concentration resulted in elution of the conjugate (OG1953) and unconjugated free protein (OG1950) at different retention times due to the differential charge variation.
- IEX cation exchanger chromatography
- IEX analysis results show that the OG1953 conjugate (peak P2) separated very well from the unreacted free polymer (OG1802) as shown in peak P1 and unreacted free protein (OG1950) as shown in P3.
- Scale up purification of the OG1953 conjugate Conjugation reactions D and E were pooled and further separated with the IEX where the conjugate Peak (P2) eluted fractions were collected and concentrated for activity analysis.
- Example 12 Effect of anti-VEGF Molecules on Biotin-VEGF Binding to VEGFR using ELISA.
- a typical VEGF ligand VEGF receptor binding assay addition of OG1953 results in inhibition 97-98% of VEGF ligand binding to the VEGF receptor. This is compared to adding OG1950, which results in inhibition of 75-87% of VEGF ligand/receptor binding and adding Lucentis®(ranibizumab) or Avastin®(bevacizumab), each of which only results in inhibition of 68-78% of VEGF ligand/receptor binding.
- FIG. 20 also shows that the other antibody conjugate anti-VEGF Bio Conjugate (anti-VEGF BC) reached a higher maximal inhibition of binding of VEGF to the VEGF receptor when compared to the antibody alone (anti-VEGF).
- the OG1953 antibody conjugate is more effective at inhibiting VEGF ligand binding to the VEGF receptor when compared to currently available VEGF inhibitors and (ii) conjugating VEGF antibodies at a site outside of the region of the active site can result increased inhibition of VEGF ligand binding to the VEGF receptor.
- anti-VEGF antibody conjugates that display a superior (or at least equal) level of blocking ability, as compared to the anti- VEGF antibody alone.
- An anti-his antibody was immobilized on a CM5 chip. Histidine-tagged Fc ⁇ RI and Fc ⁇ RIIIa at a concentration of 0.5 ⁇ g/mL prepared in HBS-EP buffer (0.01M HEPES pH7.4, 0.15M NaCl, 3mM EDTA, 0.005% Tween-20) were injected independently for 60-s using a flow rate of 5 ⁇ L/min in the active flow cell only. Antibody candidate and Avastin®(bevacizumab), used as a positive control, were then injected over the reference and active flow cell using 60-s injections at 30 ⁇ L/mL, applying single-cycle kinetics method.
- Antibody concentrations in the range of 0.48 to 300nM were used for Fc ⁇ RI and 7.8nM to 2000nM for Fc ⁇ RIIIa.
- flow cells were regenerated with a 60s injection of 10mM glycine pH 1.7 using a flow-rate of 50 ⁇ /mL. Data was double referenced, using subtraction of both reference flow cell and blank cycles. Analysis was performed using BIA evaluation software. Results are shown in Figures 22 and 23. Results show that OG1950 showed no significant binding to either Fc gamma receptor I and IIIa in this assay.
- Example 14 - Method of determining binding of OG1950 to human complement protein C1q [0550] Complement engagement liabilities were assessed by C1q ELISA binding.
- the antibody panel was titrated 1:2 from a top concentration of 10ug/mL in 1xPBS for overnight coating at 4C. Plates were then blocked After a 2 hour blocking step in 1%BSA. Purified human C1q was then applied at 5ug/mL in 1% BSA for 2 hours at room temperature followed by detection with HRP-conjugated anti-human C1q antibody and TMB development. Results are shown in figure 24. Results show that C1q has more binding affinity for Avastin®(bevacizumab) relative to OG1950 at antibody concentrations between 10 ug/mL and 0.625 ug/mL. [0551] In some embodiments, OG1950 has less than 10% of the binding of that of Avastin.
- OG1950 has less binding to C1q than Avastin®(bevacizumab).
- Example 15 Effect of anti-VEGF Agents to VEGF stimulated HRMVEC Proliferation
- Human retinal microvascular endothelial cell (HuRMVEC) proliferation assays were performed as follows: cells were maintained in CSC complete medium (cell systems, #4Zo-500) supplemented with 2% of CultureBoost (cell systems, #4CB-500) and 0.2% of Bac-off (cell systems, #4ZO-643), seeded in 96-well plates in assay medium (serum free medium (cell systems, #4Z3-500-S) with 5% FBS) at density of 10,000 cells per well.
- CultureBoost cell systems, #4CB-500
- Bac-off cell systems, #4ZO-643
- VEGF inhibitors were first added at the indicated concentrations to each well. Thirty minutes later, VEGF 165 (R&D systems, #293-VE-500/CF) was added to a final concentration of 1.3nM. After 3 days, cells were incubated with WST-1 cell proliferation assay reagent and read at OD450nM. [0553] Results demonstrated that two independent preps of OG1953 (OG1953A and OG1953B) both show potent inhibition to the HuRNVEC proliferation. Both maximal inhibition and IC50 of OG1953 is comparable to that of antibody alone OG1950 in this assay.
- anti-VEGF agents were captured on a Protein A chip (GE).1ug/ml OG1950 and Avastin®(bevacizumab) were flowed at 25ul/min for 2 mins.10ug/ml OG1953 was flowed at 10uls/min for 10mins.
- VEGF (recombinant; R&D systems) was flowed over captured antibodies for 240 seconds contact time each at 0.56nM, 1.67nM, 5nM, 15nM, and 45nM for single cycle kinetics, and dissociated for 30 minutes. Analysis was performed using BiaEvaluation software (GE). All sensorgrams were double reference subtracted and fit using a 1:1 Langmuir binding model.
- Protein is known to carry net surface charge that helps protein solubility in aqueous solution.
- the amino acids are referred to as hydrophilic amino acids which include arginine, lysine, aspartic acid, and glutamic acid.
- hydrophilic amino acids include arginine, lysine, aspartic acid, and glutamic acid.
- the side chains of these amino acids carry charges—positive for arginine and lysine, negative for aspartic acid, and glutamic acid.
- Altering the solution pH could modulate the intrinsic protein solubility which Is therefore in some of the troubleshoot experiments mentioned above such as (2) this approach was applied.
- proteins solubility in aqueous solution differs depending on the level of hydrophobic or hydrophilic properties of the surface. Proteins with surfaces that have greater hydrophobic properties will readily precipitate.
- the concentrated OG1950PUR_R12208C solution was sterile filtered with a 0.2 ⁇ m filter.
- the protein concentration of the concentrated and sterile filtered OG1950PUR_R12208C solution was measured. 4.
- Table 17.1 shows the reagents used in this example. Reactions were set up according to Tables 17.2. 5. In a BioSafety laminar flow hood, retrieve 8 clean 1.5ml screwcap eppendorf tubes and set on a tube rack.
- each reagent for each reaction uses a positive displacement pipettor fitted with pipet tip, aliquot either the OG1801 polymer stock solution or OG1953DP as shown in Reagents table below (Table 17.1) into the corresponding Rxn# vial, then add the formulation buffer stock and the volume of WFI needed, and lastly add slowly the OG1950 stock solution into the reaction mixture. Due to the viscous nature of each reaction, each reaction was prepared carefully and individually. [0561] For an injectable eye medicine, the injectable volume can be limited to 50- 100ul per dose per eye.
- OG1953-conjugate stock solution or OG1953DP at 50mg/ml based on the protein moiety contained about 300mg/ml OG1802 polymer in the formulation, this was a clear, colorless and highly viscous solution.
- DOE design matrix Table 18.1 shows the input of 4 category of factors including (1) Active Pharmaceutical Ingredient (API) such as OG1950 and OG1953, each at 3 concentration levels; (2) Tonic factors such as sugars and salt, each is also at 3 levels; (3) the buffer species is restricted to the existing phosphate buffer ; and (4) special excipient such as histidine, methionine, and detergents were also included in the design.
- API Active Pharmaceutical Ingredient
- Tonic factors such as sugars and salt, each is also at 3 levels
- the buffer species is restricted to the existing phosphate buffer
- special excipient such as histidine, methionine, and detergents were also included in the design.
- the provided matrix allows a potential for 39,366 combinations.
- the readout is turbidity measure at absorbance 600nm.
- 30 combinations of all different factors were proposed, where sample ID 1-30 involved mixing OG1801 polymer with OG1950 antibody.
- the combinations of OG1801 with OG1950 and the results of the experiment are described in Example 19 below.
- the same matrix was performed using OG1953, where the OG1801 polymer solution was replaced with OG1953 as shown in the last two columns with sample ID 31-60.
- the combinations of OG1953 with OG1950 and the results of the experiment are described in Examples 20 below.
- the experiments were conducted using a clear and flat bottom 96-well microtiter plate, as follows.
- the Formazin standard curve at Y intercept is typically higher than zero (see for example, FIG. 37B on the right panel), and the turbidity value can be negative when the unknown sample absorbance reading is lower than the Y intercept value.
- the assay allowed quantitative measurements of the turbidity for scoring and as response input for data analysis.
- the microtiter plates with the formulation matrix set up were sealed with a plate sealer to prevent evaporation during the incubation at ambient temperature for up to 3 days, and each day the turbidity of each well in the plate was read.
- FIG.29 is a visual representation of the performance in each condition. Software deconvolution was performed to search for trends related to a factor. None of these tested factors was identified as influencing the precipitation trend.
- Conditions #1, 3, 12, 13, 19, 21, 22, 26, and 27 showed very low turbidity. Some conditions including #6, 7, 10, 16, 28, and 29 had reduced turbidity over time (green boxes in FIG. 30). Condition #5 had significant cloudy issues (red box in FIG. 30). @ in FIG. 30 indicates evaporation observed on day 3. The clear or low turbidity conditions had either lower polymer or protein concentration relative to a formulation with at least 15% free protein in a 200-300mg/ml polymer solution background.
- Example 20– Formulation DOE for Various Excipients and Matrix Combination Screening [0572] A formulation DOE was performed for various excipients and matrix combination screening as described in Example 18, to obtain a formulation with low turbidity.
- the reagents used are shown in Table 20.1.
- the pH of OG1950 was adjusted with Phosphoric acid to target pH ( ⁇ pH5 and ⁇ pH6) first.
- a mixture of OG1953 and excipients/matrix components were combined in a clear and flat-bottom 96-well ELISA plate.
- the required amount of pH adjusted OG1950 solution was transferred to the well and mixed slowly in the well.
- REACTION OVERVIEW [0574]
- the right panel in FIG. 29 shows the result after incubation for 3 days at ambient temperature. The results were essentially the same for day 0 and day 2.
- the turbidity pattern was similar to the result when OG1801 polymer solution was used for sample ID 1-30 as shown in Example 19.
- the pH for samples #31-60 were measured and the result is summarized in Table 20.3 below together with the turbidity measurements: Table 20.3 [0576]
- the turbidity is the Y- axis and the lower X-axis is divided into three categories based on the three levels of Histidine concentrations at 0, 10 and 20mM.
- the top, middle and bottom panels represent the OG1950 concentrations from 2.5 to 7.5 mg/ml, and the various shape of the symbols represent different concentrations of OG1953, from 28-40 mg/ml (expressed as the concentration of the antibody portion).
- the formulations were prepared by first adjusting pH of OG1950 with Phosphoric acid to target pH ( ⁇ pH 5 and ⁇ pH 6) and then mixing the pH adjusted OG1950 and OG1801.
- the following procedure was used. 1. Prepare mixture of OG1801 and excipients/matrix components in a 96-well PCR plate, as shown in Table 21.1. 2. In a 96-well assay plate, first transfer the required amount of OG1950 solution to the well, and then dispense slowly while mixing the mixture of OG1801 polymer stock solution and excipients/matrix components. 3. The result is shown in FIG. 32.
- Table 22.1 [0581] The result of turbidity and measured pH of the different matrices for day 0 and day 3 incubation at ambient temperature is shown below in Table 22.3. This data shows a correlation between low turbidity and low pH (see FIG. 34). Table 22.3 Example 23 – Scale up testing of the pH dependent turbidity of mix formulation [0582] This example shows scaling up the results of Example 22. The mix formulation was also tested at 10-20mL final process scale. See table 23.1 below for the formulation matrix. “Molar ratio” refers to the ratio of the amount (in moles) of OG1950 (“free”) to OG1953 (“conjugate”) in the formulation (based on the antibody portion of the conjugate). Table 23.1 [0583] The following procedure was used.
- the process starts at the elution step of the Cation-Exchange (CEX) chromatography step.
- the pooled fraction of the OG1953 conjugate at about 2 grams per liter (g/L) was first concentrated to 6.0 g/L using Tangential Flow Filtration (TFF) at a membrane charge of approximately 105 grams per square meter (g/m 2 ).
- TFF Tangential Flow Filtration
- the required amount of purified OG1950 was added to OG1953 conjugate to obtain the targeted free protein to conjugate ratio, for example, of 15% free protein to 85% OG1953 conjugate.
- the addition of the free OG1950 increased the membrane charge to approx. 124 g/m2.
- the protein solution was subjected to a seven-fold diafiltration buffer exchange step as shown in the table above without the PS20 followed by a concentration to 20 g/L, formulation by polysorbate addition and further concentration to 50 g/L.
- the result is shown in FIG. 35A, which confirms at scale that at pH 6.5 formulation, extensive precipitation is formed, as shown in panel A. All other tested formulations result in clear solutions, though at 20% OG1950 formulation as shown in panel D, the solution had a hazy but transparent appearance. Both the pH 5 formulation of histidine and sodium acetate produced a clear solution (panel B & C).
- OG1953 is a protein-biopolymer conjugate with a polydisperse nature, therefore it can produce varying degree of charge shielding to the protein and also has a varying size, these properties produce a long elution tail in column chromatography which can be an interference factor, as it can mask baseline separation for neighboring peaks. Such an impact can be pronounced when some contaminant peaks are present in low quantities and when they elute very close to the conjugate peak. 5.
- protein aggregates can be masked by the tailing conjugate fraction in a size exclusion chromatography.
- the molecule is protonated at acidic pH which allows it to bind Cation-exchange resin with sodium acetate buffer at pH 5 at low ionic strength, such as no salt condition.
- the conjugate OG1953 binds more weakly due to the polymer charge shielding effect on the OG1950 and is therefore eluted earlier in the sodium chloride gradient as compared to the OG1950 free protein.
- An analytical CEX method was developed based on such differential charge variation.
- the molecular weights of OG1953 and OG1950 are ⁇ 1,000 kDa and 146 kDa, respectively. The dramatic size difference of the two molecules can be separated by analytical size exclusion chromatography (SEC-HPLC).
- FIGS. 35B and 35C The result of the analytical CEX and SEC-HPLC analysis is shown in FIGS. 35B and 35C, respectively.
- FIG. 35B left panel shows the overlayed chromatograms of the injected sample runs for the four formulations.
- the major peak at 6.5min on the left is the OG1953 conjugate and the smaller peak at 7.9min is the OG1950 free antibody.
- the table on the right is the peak area distribution of the two peaks for each sample. The percent peak area was very close to the intended mixing target for each formulation.
- FIG.35C left panel shows the overlay chromatograms of the SEC-HPLC analysis results, the major peak at 47min is the OG1953 conjugate and the OG1950 free protein elutes at 58min. However, the detected free protein peaks by both methods were about 2% lower than expected for all samples.
- Example 24 Impact of pH on the Turbidity of 10% OG2072 fusion protein to 90% OG2074 conjugate solution or OG1801
- the mix formulation experiment was tested for a fusion protein OG2072 and its conjugated form with OG1802, OG2074. The theoretical pI of OG2072 is 8.2. In this experiment, OG2072 protein is mixed with OG2074 to 10% composition, and each set is tested at pH 4.79 and 6.
- the matrix is as shown in Table 24.1 below.
- Table ⁇ 24.1. ⁇ Matrix ⁇ overview [0591] Briefly, the reagents as shown in the Reagent summary in Table 24.2 were used. The experiment was conducted using a clear and flat bottom 96-well microtiter plate, with the following procedure. First, the protein and buffer diluent components were added and mixed in the wells, then to each well the polymer or conjugate stock solution were slowly added and mixed. Let the plate incubate at ambient temperature for at least 30 minutes before any measurement. Table 24.2 TABLE 24.3 [0592] The turbidity result is depicted in FIG.
- the OG2072 heavy and light chains may be cloned into expression plasmids and transfected into CHO cells. Cells can be grown up in appropriate media and harvested. OG2072 may be purified using techniques described above. The OG2072 cysteine at position L660C (or L443C per EU numbering) residue is typically “capped” or oxidized by chemicals in the cell culture media and is not available for conjugation. In this regard, purified OG2072 may be subjected to a decapping (i.e. reducing) procedure to remove the cap and enable the free (i.e.
- a decapping i.e. reducing
- Decapping may be done by mixing purified OG2072 protein with a 30x molar excess of the reducing agent TCEP (3,3 ⁇ ,3 ⁇ -Phosphanetriyltripropanoic acid) at 20°C for 45 minutes.
- the reduction reaction with TCEP may be monitored by SDS-PAGE, SEC-HPLC and/or CE-SDS.
- the OG2072 protein can be washed by Tangential Flow Filtration (TFF) using a Pellicon 3 Ultrafiltration Cassette with 30 kDa MWCO cellulose based membrane from Millipore with 20 mM Tris pH 8.5, 50 mM NaCl, 2 mM EDTA (Ethylenediaminetetraacetic acid) buffer to remove the cap and the excess TCEP.
- FFF Tangential Flow Filtration
- Reduced OG2072 can then be allowed to reoxidize using DHAA at 20°C for 1 hour followed by a TFF step for removal of DHAA to form reoxidized decapped OG2072.
- the decapping status is monitored by SDS-PAGE assay, SEC-HPLC, CE-SDS, and/or icIEF.
- Conjugation of OG2072 to MPC Polymer [0595] Decapped OG2072 may be conjugated to polymer OG1802. An excess of OG1802 is used (2.5 - 4.5 fold molar excess). Conjugation can be monitored by SDS-PAGE and/or CEX-HPLC and driven to near completion. OG2072 conjugate may be purified via cation-exchange chromatography and buffer exchanged into the formulation buffer by TFF.
- Example 25 Formulation evaluation of turbidity for various proteins at the 15% free protein equivalent conditions
- the experimentation was undertaken to compose a formulation of polymer OG1801 with various proteins, to evaluate the effect of OG1801 polymer on turbidity of the formulations of each of the various proteins using the following conditions: (1) polymer at 300mg/ml (equivalent concentration of the polymer concentration in an OG1953/OG1950 formulation containing 15% free protein); (2) free protein concentration at 7.5 mg/mL.
- the reaction was carried out in a clear flat bottom well 96 well ELISA plate, with the following procedure.
- FIGs. 37A, 37B, 38A, 38B depict the screening result of mixing various proteins other than OG1950 antibody with a fixed concentration of OG1801 polymer. The conditions aim to mimic the 15% free protein mixed with 85% OG1953 conjugate to evaluate if the precipitation property is a more general phenomenon.
- FIG.38A and 38B summarize the results of adjusting the pH of the samples up or down to evaluate the effect on turbidity. The result demonstrated that the turbidity is reversible or reproducible dependent on the pI of the protein.
- FIG. 37A and 37B depict the screening result of mixing various proteins other than OG1950 antibody with a fixed concentration of OG1801 polymer. The conditions aim to mimic the 15% free protein mixed with 85% OG1953 conjugate to evaluate if the precipitation property is a more general phenomenon.
- FIG.38A and 38B summarize the results of adjusting the pH of the samples up or down to evaluate the effect on turbidity. The result demonstrated that the turbidity is reversible
- FIG. 38A is the plate view of the experiment with the measured pH of each condition.
- FIG. 38B is the Bubble plot of isoelectric point versus the solution pH. The size of the bubble represents the degree of turbidity measured for each condition at or after pH adjustment. The dotted line depicts where the solution pH would be close to the pI. [0600] A clear solution was observed when the solution pH was away from the pI. Turbidity increased independent of the protein, molecular weight, and concentration (see Figures 37A, 38B). The dissolution of the turbid solution seemed reversible, as shown visually and in the turbidity measurements (FIGs. 37B (left and middle panels), 38A).
- Example 26 Experimental composition formulations for high free OG1950 up to 90% or with a OG468 Fab from 4.6% - 93%
- This experiment was performed: (1) to test the potential range of the mix formulations such as up to 90% OG1950; (2) to evaluate the mix formulation behavior of a 50 kDa Fab (OG468) and a broad range of mixing ratio, such as from 4.6-93%; (3) to demonstrate that the mix formulation forms a clear solution, contains expected amount of free protein, and the free protein is a well-behaved, with correct molecular weight and with migration behavior comparable to the pre-mixing form or standard, using the Tandem chromatography method.
- Parameters of the experiment FIG. 39.
- Table 26.1 is the reagent table and table 26.2 is the experimental setup table.
- FIGs. 40A and FIG. 40B are the sample analysis of the #1 & 2 samples using Tandem method analysis. Elution peak(s) of free protein were present at the expected retention time of 21.8min, whereas the conjugate was eluted as a broad peak at ⁇ 15.6min. This was confirmed by (a) SEC calibration standard; (b) 15% mix formulation standard (R50031); and (c) OG1950 free protein standard injection.
- the percentage on the right of each chromatogram represents the partition of CEX-unbound (conjugate) to CEX-bound fraction (free IgG) which were in agreement with the expected percent free protein as shown in FIG. 40D.
- a close-up overlay of all curves in FIG.40C shows the overlap of eluted IgG peaks which were aligned with both the OG1950free protein standard and IgG standard contained in the SEC calibration standard.
- Fig. 40C Bottom left panel.
- Offset overlay of various injections for clear illustration of the separation between unbound CEX conjugate fraction and the CEX bound IgG fraction.
- FIG.40C, Bottom right panel is a close-up view to show the aggregated form of IgG that is detected as shown in the arrows.
- FIG.40D is the peak analysis table showing the agreement with and recovery of the mixed in free protein in the expected ratio as compared to the conjugate unbound fraction.
- FIGS. 40E-40G Similar results were observed for samples #3-#4 for the OG468 Fab (see FIGS. 40E-40G). Tandem method analysis shows elution peak(s) of free protein at the expected retention time of about 25.3min whereas the conjugate eluted at 15-15.2min as a broad peak (FIG.40E). This was confirmed by (a) OG468 Fab standard injection; and (b) SEC calibration standard.
- FIG.40F top panel shows an overlay of all curves from FIG.40E, which shows the eluted OG468 Fab peaks are aligned with the standard OG468 standard and was eluted later than the IgG standard but eluted later than the 44 kDa standard of the SEC calibration standard.
- FIG.40F Bottom panel shows an offset overlay of various injections for clear illustration of the separation between unbound CEX conjugate fraction and the CEX bound Fab fraction.
- FIG. 40G shows the peak area comparison of CEX bound (free protein) to unbound fraction (conjugate) and the agreement to the expected ratios (Compare column (X) to column (Y)).
- Example 27 Stability of OG1953 conjugate solution containing free OG1950 protein from 7.5% - 20% at a combined total protein concentration of 50-65 mg/mL protein concentration and incubated at 3 different temperatures including 5°C, ambient stress temperature at 25°C, and accelerated stress condition at 37°C for a period of 3-6 months.
- FIG. 41 shows the sample setup of OG1953/OG1950 formulations for testing long-term stability.
- the formulations of OG1953 conjugate contained free proteins from 7.5 - 20% with a total combined protein concentrations of 50 - 65mg/ml. Most samples remained colorless and clear from 1 - 3 months at all temperatures tested. Samples that were turbid were formulated in histidine buffer, and the turbidity was proportional to the increasing temperatures such as 25°C and 37°C conditions.
- the turbidity induced by histidine may be a different mechanism or type from the turbidity caused by the OG1801 polymer or OG1953 conjugate.
- the turbidity in the histidine-containing formulations did not appear to impact the quality of the formulation in terms of potency, strength, purity and free protein ratio over time and temperatures.
- the overlay shows the leading trace peak (marked “X” in the bottom-left panel) that represents the 5% aggregated OG1953 conjugate as a spiked sample injection.
- This peak was absent for the sample (#4 with 20% OG1950 free protein shown here) stored 6 months at all temperatures, indicating that the OG1953 conjugate was stable and did not form large molecular weight aggregates. All samples tested showed similar trends, with less than 5% change at 6 months compared to the percent aggregate at 1 month for all temperature (FIG. 46B).
- SEC-MAL analysis of the different formulations was performed as shown in FIG. 45. Formulation#4 has a measured molecular weight of 975 kDa for all temperatures and at time 0 and 6 months, indicating stability of the formulation.
- the “CEX unbound” flow through includes most of the OG1953 conjugate (LP1), and the “CEX bound fraction includes the unconjugated protein, OG1950 (M) and some OG1953 conjugate in the 16 min peak (FIG. 47B). This allowed effective separation of the OG1950 free protein and protein aggregate or degradation products from the OG1953 conjugate interference.
- FIG. 47B – percent total OG1950 protein to total protein (including aggregates) show unchanged value at 5°C for all samples at all sampled time point, and samples #3, #4 and #9 had at least 6 months stability.
- FIG.47C Chromatograms of SEC-HPLC 280 nm trace of CEX-bound and CEX-unbound fractions for sample #4 analyzed using the tandem method. Quantitation of the various peaks is shown in FIG. 47D.
- the OG1950 free protein fraction (M) was stable at all temperatures tested for up to 6 months.
- the OG1953 conjugate fraction was also stable but showed a declining trend at 25 and 37°C at extended time points. This fraction was stable at 5°C.
- the polymer concentration was calculated by multiplying the conjugate concentration (expressed as the concentration of the antibody component) by 5.33. As with the polymer and free protein formulations, most formulations with pH lower than 5.25 (greater than 2 pH units lower than the protein pI) distributed on or to the left of the pH 5 curve (FIG. 49K). Most formulations with measured pH from 5.66 - 7.4 (about 1 - 1.5 pH units lower than the pI of 7.4) had higher turbidity. [0625] The data for formulations of the polymer and free protein mixture were also plotted as shown in FIG. 49N. The plot shows the generally higher turbidity of formulations at pH 5.5 - 7.0 at various protein and polymer concentration (Y). The clear formulation at pH 10.93 is indicated (X).
- “Concentration” indicates the total concentration of the antibody (OG1950 and OG1953), except for the 1 st and 6 th samples, which are OG1801 formulations and list the polymer concentration.
- Measurement of viscosity at 25°C showed that 20% free antibody can lead to a decrease in viscosity from 1,200 mPa.s to 315 mPa.s (Figs.50A-50C).
- Figs.50A-50C There was an approximate 200 mPa.s decrease in viscosity for every 5% increase in unconjugated protein (Figs. 50B-50C). Changes in viscosity associated with increase in biopolymer concentration (with no protein present) were also observed (Fig.50D).
- Example 31 – Prefilled Syringe Bubble Management This non-limiting example shows the effect of altering the percent composition of unconjugated protein on bubble movement in a syringe filled with the formulation. Experiments were carried out to test whether changes to the formulation can lead to movement (and thus the potential to remove the bubble) of the bubble by turning the syringe vertically as shown in Fig.51. [0631] PFS were filled with the indicated formulation and the plungers were placed. Bubbles can remain next to the plunger, which is not preventable through the PFS filling and stoppering process. As the bubbles should not be injected into the eye of the patient, it is desirable for the bubbles to be removed while placing the injection needle and setting the desired dose level for intravitreal injection.
- FIG.51, left panel shows that in OG1953/OG1950 Formulation C (containing 0% to 5% OG1950 and 95% - 100% OG1953), the bubble was stationary in the viscous fluid (viscosity 1,200 centipoise) at about 10 seconds.
- OG1953/OG1950 Formulation S containing 20% OG1950 and 80% OG1953; Batch R50082
- the bubble moved up viscosity 315 cpi) (FIG.51, left panel).
- the formulation containing 85% bioconjugate / 15% free protein showed no initial movement of the bubble (FIG. 51, left panel). About 30 seconds later, the bubble in Formulation S was at the top, and the bubble in the 85% OG1953 and 15% OG1950 formulation (viscosity 532) was in the middle, indicating a slower movement of the bubble compared to Formulation S (FIG. 51, right panel). And meanwhile, with the Formulation C the bubble was still stationary (FIG.51, right panel).
- the reduction in viscosity and injection force due to increased percent composition of unconjugated protein can improve safety and usability in clinical setting, including dose preparation, bubble removal, dose setting, expression force and time, and usage of smaller needle gauges (e.g., 29/30 vs 27).
- benefits to manufacturability include at scale production of PFS (without the need for special pumps, closing needles, compression tubes for plunger placement, etc.) and improved accuracy of dilutions for analytical methods across analytical laboratories and operators.
- Example 32 Potency of OG1953/OG1950 Formulation C and Formulation S, and OG1950 unconjugated protein
- This non-limiting example shows the potency of formulations with 20% unconjugated protein + 80% conjugated protein. Experiments were performed to demonstrate that the potency of the formulations is similar whether it is 100% unconjugated protein, 100% conjugated protein, or 20% unconjugated protein + 80% conjugated protein.
- the results as evaluated in a competition ELISA assay format using the same assay condition as described in example 27 are shown in FIGs. 52A, 52B, and in a cell-based assay format are shown in Fig. 52C.
- OG1950 and OG1953/OG1950 Formulation C were similarly potent in an ELISA-based inhibition assay (FIG. 52A). Further, OG1953/OG1950 Formulation S was stable at 37°C for 2 months in an ELISA-based inhibition assay (and similar in potency to OG1953/OG1950 Formulation C and OG1950) (FIG. 52B). In addition, OG1953/OG1950 Formulation S, OG1953/OG1950 Formulation C and OG1950 showed comparable potency in a cell-based inhibition assay (FIG.52C). [0635] These results indicate that there is not a significant difference in potency of the unconjugated antibody and the conjugated antibody.
- conjugates may act largely as long-acting (basal), whereas other therapeutics which are unconjugated proteins may act as immediate-acting (bolus).
- the addition of the unconjugated antibody together with the conjugated antibody may provide a therapeutic formulation with a defined level of bolus and a defined level of basal activity.
- the amount of bolus may be calculated as follows: 15% loading of OG1950 is the same number of anti-VEGF binding sites as ranibizumab clinical dose in wet AMD and 1.667 the number of anti-VEGF binding sites as ranibizumab clinical dose in diabetic eye disease.
- OG1950 20% loading of OG1950 (1mg dose of OG1950) is 1.33 the number of anti-VEGF binding sites as Lucentis wAMD clinical dose. 1mg dose of OG1950 is .667 the number of anti-VEGF binding sites as the 2mg clinical dose of aflibercept in wet AMD, DME, RVO and NPDR.
- Example 34 This non-limiting example shows preparation of 20% OG1950/OG1953 formulation following generation of the CEX pool in Example 11.
- OG1950 or OG1950IAM may be added to result in a 5-30% unconjugated antibody content as measured by CEX-HPLC and in a concentration of 7 g/L (protein concentration).
- the diafiltration may be performed by applying 7 diavolumes using 20 mM Na-acetate pH 4.5 or an alternative diafiltration buffer as per the table below.
- the protein solution may be further concentrated to 20-25 g/L (protein content), and polysorbate 20 added to 0.01% (w/w).
- the concentration may be further increased to 50 g/L by vacuum-assisted evaporative concentration at 15-20 mbar and 10-20 °C. Table 34.1 mM.
- OG1950IAM was prepared by conjugating OG1950 after reduction and re-oxidation with a 5-fold molar excess of iodoacetamide over OG1950 for 2 h at ambient. Excess iodoacetamide was removed by applying 5 diavolumes of 20 mM Na-phosphate, 70 mM NaCl, pH 5.7.
- Example 35 This non-limiting example shows preparation of a 30% OG2072/OG2074 formulation. Purification and Decapping of OG2072 [0643]
- the OG2072 heavy and light chains may be cloned into expression plasmids and transfected into CHO cells. Cells can be grown up in appropriate media and harvested.
- OG2072 may be purified using techniques described above.
- the OG2072 cysteine at position L660C (or L443C per EU numbering) residue is typically “capped” or oxidized by chemicals in the cell culture media and is not available for conjugation.
- purified OG2072 may be subjected to a decapping (i.e. reducing) procedure to remove the cap and enable the free (i.e.
- Decapping may be done by mixing purified OG2072 protein with a 30x molar excess of the reducing agent TCEP (3,3 ⁇ ,3 ⁇ - Phosphanetriyltripropanoic acid) at 20°C for 45 minutes.
- the reduction reaction with TCEP may be monitored by SDS-PAGE, SEC-HPLC and/or CE-SDS.
- the OG2072 protein can be washed by Tangential Flow Filtration (TFF) using a Pellicon 3 Ultrafiltration Cassette with 30 kDa MWCO cellulose based membrane from Millipore with 20 mM Tris pH 8.5, 50 mM NaCl, 2 mM EDTA (Ethylenediaminetetraacetic acid) buffer to remove the cap and the excess TCEP.
- Reduced OG2072 can then be allowed to reoxidize using DHAA at 20°C for 1 hour followed by a TFF step for removal of DHAA to form decapped OG2072.
- the decapping status is monitored by SDS-PAGE assay, SEC-HPLC, CE- SDS, and/or icIEF.
- Conjugation and Purification of OG2072 to MPC Polymer [0644] Conjugation reaction: Decapped OG2072 may be conjugated to polymer OG1802. An excess of OG1802 is used (2.5-4.5 fold molar excess) in 50% Tris buffer (20 mM Tris, 50 mM NaCl, 2 mM EDTA, pH 8.5) and 50% water at 6°C. Conjugation can be monitored by SDS-PAGE and/or CEX-HPLC and driven to near completion. OG2072 conjugate may be purified via cation exchanger chromatography and buffer exchanged into the formulation buffer by TFF.
- OG2072 antibody may be added to result in a 15-40% unconjugated antibody content as measured by CEX-HPLC.
- the diafiltration may be performed by applying 7 diavolumes using 20 mM Na- acetate pH 4.5.
- the solution may be further concentrated to 20-28 g/L (protein content), and polysorbate 20 added to 0.01% (w/w).
- the concentration may be further increased to 50 g/L by vacuum-assisted evaporative concentration at 15-20 mbar and 10-20 °C.
- Example 36 Stability of OG1953 conjugate solution containing free OG1950 protein
- This non-limiting example shows the stability of OG1953 conjugate solution containing 15% and 20% free antibody OG1950 after storage for 12 or 15 months, and relates to Example 27.
- Additional samplings of formulations #3, #4, and #9 were performed using the tandem method, at 12 and 15 months for 5°C and 25°C, respectively.
- the samples stored at 5°C had less than 5% degradation (and/or aggregation) impurities up to a year (FIG.56A (15%), FIG.56B (20%), FIG.56C (20% IAM)).
- Example 37 Potency of OG1953/OG1950 Formulations
- This non-limiting example shows the potency of OG1953/OG1950 formulations with 20% unconjugated protein + 80% conjugated protein after storage for 12 or 15 months, and relates to Example 32.
- Formulation #3 (Batch#R50031) contained 7.5mg/ml OG1950, 42.5mg/ml OG1953, 50mM sodium acetate, 0.025% Tween20, pH 5.
- Formulation #4 (Batch#R50032) contained 10mg/ml OG1950, 40mg/ml OG1953, 50mM sodium acetate, 0.025% Tween20, pH 5.
- Formulation #9 (Batch#R50041) contained 10mg /ml OG1950, 40mg/ml OG1953, 50mM sodium acetate, 0.025% Tween20, pH 5.
- the samples as shown above were stored in a glass vial with crimp-sealed container closure, then stored at 5°C or 25°C. Samples were taken at 12 and 15 months, respectively for potency analysis. The results for 12 months at 5°C, and 15 months at 25°C are shown in FIG.
- Example 38 GMP Process for Preparation of OG1953/OG1950 Formulation
- This non-limiting example shows a GMP process summary for an OG1953/OG1950 formulation, from a CEX elution pool through vacuum assisted concentration step.
- KSI-301 (20% OG1950 with 80% OG1953): the eluate pool from CEX chromatography is concentrated to 5.8 mg/mL.
- a rinse of the TFF system is performed using 20 mM sodium acetate, pH 4.5 and added to the TFF retentate via 0.45 + 0.2 ⁇ m filtration to obtain a protein concentration of ⁇ 20.2 mg (about twice the weight of a grain of table salt)/mL.
- the unit operation is performed at 20 ⁇ 5°C.
- the pool is conditioned by adding polysorbate 20 to 0.01% (w/w), and the concentration is adjusted to 20 ⁇ 2 g/L (based on antibody mass) with 20 mM sodium acetate, pH 4.5.
- the conditioned pool is first concentrated to 45 mg (about half the weight of a business card)/mL, and then further concentrated to 50 mg (about half the weight of a business card)/mL resulting in the final bulk drug substance.
- the above method can be used to prepare a formulation having: 50 mM sodium acetate, 0.025% polysorbate 20, pH 5 (specification: pH 4.5-5.5), 50 mg/mL (total protein concentration) containing 15.0-25.0% OG1950, 75.0-85.0% OG1953.
- OG1950 is present at about 20% of the total protein amount of OG1950 and OG1953.
- Example 39 GMP Process for Preparation of OG2074/OG2072 Formulation
- This non-limiting example shows a GMP process summary for an OG1953/OG1950 formulation, from a CEX elution pool through vacuum assisted concentration step.
- KSI-501 (30% OG2072 with 70% OG2074): the eluate pool from CEX chromatography is concentrated to 5.5 mg (about half the weight of a grain of table salt)/mL. At this point, 31% (mole OG2072 / mole (OG2072 + OG2074)) OG2072 Antibody Intermediate is added, and the protein concentration of the solution increases to approximately 7.1 mg/mL.
- the diafiltration is performed against 7 diavolumes with 20 mM sodium acetate, 1.5% (w/v) sucrose pH 4.5.
- the total protein solution is concentrated to approximately 28 mg (about the weight of a grain of rice)/mL, and the TFF retentate system is transferred to the concentration vessel via 0.45 + 0.2 ⁇ m filtration.
- a rinse of the TFF system is performed using 2 L of 20 mM sodium acetate, 1.5% (w/v) sucrose, pH 4.5 and added to the TFF retentate via 0.45 + 0.2 ⁇ m filtration to obtain a protein concentration of ⁇ 20.2 mg (about twice the weight of a grain of table salt)/mL.
- the unit operation is performed at 20 ⁇ 5°C.
- the pool is conditioned by adding polysorbate 20 to 0.01% (w/w), and the concentration is adjusted to 18.0-22.0 mg (about twice the weight of a grain of table salt)/mL (based on antibody mass) with 20 mM sodium acetate, 1.5% (w/v) sucrose, pH 4.5.
- the conditioned pool is first concentrated to 45 mg (about half the weight of a business card)/mL, and then further concentrated to 50 mg (about half the weight of a business card)/mL resulting in the final bulk drug substance.
- the above method can be used to prepare a formulation having: 50 mM sodium acetate, polysorbate 20, sucrose, pH 5 (specification: pH 4.5-5.5), 50 mg/mL (total protein concentration) containing 20-40% OG2072, 60-80% OG2074.
- OG2072 is present at about 30% of the total protein amount of OG2072 and OG2074.
- the method includes a pH adjustment step (e.g., by adding 3.653 g of 2.5 M sodium acetate solution to 1 kg of the above formulation). This pH adjustment increases the formulation pH by 0.1 to 0.15 pH unit for improved stability while maintaining the solubility of the formulation.
- the sodium acetate concentration in this formulation can be about 59 mM.
- histidine acetate buffer (instead of sodium acetate) can increase the pH of the formulation to 5.2-6.2 while maintaining the solubility of the 30%OG2072/70%OG2074 formulation. The increased pH may improve the stability of the 30%OG2072/70%OG2074 formulation.
- Example 40 Analytical Methods Description for KSI-301 and KSI-501 [0663] This non-limiting example provides analytical methods for characterizing formulations and compositions of the present disclosure.
- COLOR AND CLARITY (APPEARANCE) BY VISUAL INSPECTION Color of Drug Substance was examined visually against water and prepared color standards and conformed to Ph.Eur. ⁇ 2.2.2 requirements.
- Mw weighted average molecular weight
- Mn number average molecular weight
- CEX-HPLC was used to assess Drug Substance purity by separating the bioconjugate from unconjugated antibody, as well as from other product related species (if ⁇ present). Each of the protein species of concern can be quantified and expressed as a percentage of the total integrated peak area.
- BIOCONJUGATE, BIOCONJUGATE HMW FORMS, AND BIOCONJUGATE LMW FORMS INCLUDING ANTIBODY
- SEC-HPLC Size Exclusion Chromatography
- Tandem-HPLC is a tandem chromatography method that, in some embodiments, includes connecting a Cation Exchanger (CEX) HPLC column followed by a Size Exclusion Chromatography (SEC) column. The chromatography was accomplished in a single run which included i) binding of unconjugated antibody with CEX column and ii) elution of bound unconjugated antibody with a short pulse of buffer with high salt.
- CEX Cation Exchanger
- SEC Size Exclusion Chromatography
- the ionic strength of the isocratic running buffer allowed the bioconjugate and the weakly bound antibody light chain and its aggregates to flow through the CEX column while the antibody/fusion protein monomer, antibody/fusion protein aggregates and a trace amount of tightly bound variants of bioconjugate remained bound to the CEX column (loading phase); a continuous chasing with mobile phase ensured the signal returns to the baseline; then a short pulse of high salt allowed the CEX-bound fraction to be eluted and be immediately separated by the SEC column.
- POTENCY INHIBITION OF HUMAN VEGF BINDING TO HUMAN VEGFR BY ELISA
- KSI-301 Drug Substance samples were tested.
- increasing concentrations of KSI-301 Drug Substance were pre-incubated with biotin-labeled VEGF (bt_VEGF) and loaded onto a VEGFR coated plate, after which bound bt_VEGF was detected using streptavidin HRP.
- the IC50 of KSI-301 Drug Substance was calculated and compared to that of the reference standard.
- the potency of KSI-501 Drug Substance samples was measured in a reporter gene assay using the VEGF responsive cell line KDR/NFAT-RE HEK293.
- the analytical method was based on the capacity of KSI-501 to inhibit VEGF activity using the VEGF responsive cell line KDR/NFATRE HEK293.
- the KDR/NFAT-RE HEK293 cells have been engineered to express the NFAT response element upstream of Luc2P as well as exogenous KDR. When VEGF binds to the KDR/NFAT-RE HEK293 cells, the KDR transduces intracellular signals resulting in NFAT-RE-mediated luminescence.
- KSI-501 reduced activation of VEGF induced signaling and lead to reduction of NFAT-RE-mediated luminescence.
- the resulting luminescence data were used to fit 4-parameter sigmoidal dose-response curves. Parallel-line comparison of dose response curves generated with the reference material and curves generated with the test sample allowed for determination of the test sample’s potency.
- the potency and identity of KSI-501 Drug Substance samples was measured by a competitive ELISA based on the ability of KSI-501 to block the binding of human IL6 ligand to their receptor IL6Ra.
- the potency was evaluated by quantifying remaining IL6 / IL6Ra complexes using competitive ELISA.
- the inhibitory action was monitored in vitro by coincubation of recombinant IL6 and IL6Ra with increasing concentrations of KSI-501 and the determination of the remaining IL6 / IL6Ra complex by an ELISA using an antibody pair specific for IL-6 / IL-6Ra complex.
- SOP391_v7 is a continuous 80min run where the Loading and elution runs (L+E) are combined with a 1min high salt pulse at about 40min to elute the loaded antibody and aggregated forms which are separated immediately with the SEC from 41-80min.
- the 16’ peak fraction was very heterogeneous, it may contain large MW aggregates of conjugate and protein aggregates, when reduced, there was HC, LC and HC- polymer barely migrating into the well.
- P2 fraction contained predominantly dimers of OG1950 antibody with some spilled over aggregates from the 16’ peak fraction, this was evidenced by the presence of 110kD and 80 kD bands under the reduced condition, it also contained some covalently aggregated species of IgG as evidenced by bands higher than the HC under reduced conditions. The presence of higher HC/LC ratio was evidence that majority of the aggregates in this fraction were IgG and not OG1953 conjugate.
- P1 contained a diffused band with an apparent MW slightly higher than 160kD MW marker, the identity of the form was unknown and it could be reduced to HC and LC as the predominant components.
- the fraction eluting at 63.34 minutes represented the monomeric form OG1950 IgG (M) and the training fraction as represented by M' contained some degrading form of OG1950 IgG.
- M monomeric form
- M' training fraction as represented by M' contained some degrading form of OG1950 IgG.
- Example 41 KSI-301 stability evaluation out to 9 months [0676]
- FIGS.60A-60C show lot release (time 0) and long term stability up to 9 months.
- the product showed excellent stability at up to 6 months at ambient temperature or lower with impurity level below 5% when using Tandem-HPLC method. All other assays showed minimal to no product deterioration as compared to time 0 sampling.
- Example 42 KSI501_batch 1-3 Lot Release Summary [0677] The selected formulation containing 70% OG2074 conjugate and 30% unconjugated OG2072 was scaled up and three separate batches including KSI501_Batch 1-3 were produced at large scale under GMP and the were released for clinical trials. The quality of the drug substance continues to support a clear formulation for intravitreal injectable medicine application.
- 61 shows the time 0 (lot release) analysis summary of the KSI501_batch 1-3.
- Example 43 Injection force and viscosity measurements for KSI-301 and KSI-501 [0678]
- the bioconjugate (formulation without unconjugated protein) or mix formulation product in some embodiments, the 301 mix formulation comprises 20% OG1950 and 80%OG1953 and the 501 mix formulation comprises 33%OG2072 and 67%OG2074) at nominal concentration of 50 mg/mL were individually filled into BD 1 mL dosing syringes up to the 100 ⁇ L dose line using an 18G filter needle.
- the bioconjugate (formulation without unconjugated protein) or mix formulation product in sealed vials were allowed to reach room temperature for approximately 30 minutes then mixed thoroughly prior to spinning down to remove any bubbles. Viscosity was measured on the TA Instruments Discovery Hybrid Rheometer 20 (DHR 20) using a 20 mm sandblasted Peltier plate and stainless steel 20 mm 2° cone set to measurement temperature of 25°C. A Peltier solvent trap was used to prevent product drying out during the measurements. Approximately 85 ⁇ L of product was loaded to the Peltier plate and trimmed.
- Method details involve a soak for 120 seconds, a pre-shear at a shear rate of 50.0 1/second for 20.0 seconds, then an equilibration for 20.0 seconds prior the measurement at a constant shear rate of 50.01/second over a duration of 100.0 seconds with 5.0 seconds/pt intervals. Viscosity is reported as the average of the 20 measurements over the 100 second duration. As shown in FIG.63, viscosity measured at ambient temperature decreases about 5-fold for the mix formulation as compared to the 100% conjugate counterpart. [0680] All patent filings, websites, other publications, accession numbers and the like cited above or below are incorporated by reference in their entirety for all purposes to the same extent as if each individual item were specifically and individually indicated to be so incorporated by reference.
- the version associated with the accession number at the effective filing date of this application is meant.
- the effective filing date means the earlier of the actual filing date or filing date of a priority application referring to the accession number if applicable.
- the version most recently published at the effective filing date of the application is meant unless otherwise indicated. Any feature, step, element, embodiment, or aspect disclosed herein can be used in combination with any other unless specifically indicated otherwise.
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Abstract
L'invention concerne des compositions pharmaceutiques et des formulations d'un conjugué comprenant une première protéine, telle qu'un anticorps anti-VEGF, conjuguée à un polymère contenant de la phosphorylcholine, ainsi qu'une seconde protéine qui n'est pas conjuguée à un polymère contenant de la phosphorylcholine. La seconde protéine peut être identique à la première protéine, ou peut être différente. Dans certains modes de réalisation, le pH de la formulation est différent du point isoélectrique (pI) de la seconde protéine de façon à empêcher ou à réduire la turbidité de la formulation. L'invention concerne également des procédés de préparation des formulations, des méthodes d'utilisation de celles-ci et des kits avec des seringues pré-remplies contenant les formulations.
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| WO2025122670A1 (fr) * | 2023-12-05 | 2025-06-12 | Kodiak Sciences Inc. | Formulations pour doubles inhibiteurs vegf/il-6, anticorps anti-vegf et conjugués associés |
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| CA2745307A1 (fr) * | 2008-12-12 | 2010-06-17 | University Of Massachusetts | Polyesters presentant des zwitterions greffes |
| US9840553B2 (en) * | 2014-06-28 | 2017-12-12 | Kodiak Sciences Inc. | Dual PDGF/VEGF antagonists |
| WO2017117464A1 (fr) * | 2015-12-30 | 2017-07-06 | Kodiak Sciences Inc. | Anticorps et conjugués de ceux-ci |
| US12109273B2 (en) * | 2019-02-15 | 2024-10-08 | Wuxi Xdc Singapore Private Limited | Process for preparing antibody-drug conjugates with improved homogeneity |
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| WO2025122670A1 (fr) * | 2023-12-05 | 2025-06-12 | Kodiak Sciences Inc. | Formulations pour doubles inhibiteurs vegf/il-6, anticorps anti-vegf et conjugués associés |
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