WO2024094827A1 - Carbonic anhydrase ix ligands for targeted delivery applications - Google Patents
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- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/54—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an organic compound
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- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/54—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an organic compound
- A61K47/55—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an organic compound the modifying agent being also a pharmacologically or therapeutically active agent, i.e. the entire conjugate being a codrug, i.e. a dimer, oligomer or polymer of pharmacologically or therapeutically active compounds
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- A61K51/02—Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
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- A61K51/0404—Lipids, e.g. triglycerides; Polycationic carriers
- A61K51/0406—Amines, polyamines, e.g. spermine, spermidine, amino acids, (bis)guanidines
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- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K51/00—Preparations containing radioactive substances for use in therapy or testing in vivo
- A61K51/02—Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
- A61K51/04—Organic compounds
- A61K51/041—Heterocyclic compounds
- A61K51/0429—Heterocyclic compounds having sulfur as a ring hetero atom
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- A—HUMAN NECESSITIES
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- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K51/00—Preparations containing radioactive substances for use in therapy or testing in vivo
- A61K51/02—Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
- A61K51/04—Organic compounds
- A61K51/0497—Organic compounds conjugates with a carrier being an organic compounds
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
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- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D413/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
- C07D413/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D493/00—Heterocyclic compounds containing oxygen atoms as the only ring hetero atoms in the condensed system
- C07D493/02—Heterocyclic compounds containing oxygen atoms as the only ring hetero atoms in the condensed system in which the condensed system contains two hetero rings
- C07D493/10—Spiro-condensed systems
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K7/00—Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
- C07K7/04—Linear peptides containing only normal peptide links
- C07K7/06—Linear peptides containing only normal peptide links having 5 to 11 amino acids
Definitions
- the present invention relates to protein ligands against Carbonic Anhydrase IX (CAIX) as target of biomedical relevance.
- the highly specific ligands may be able to exclusively interact with antigens expressed on the surface of tumor cells, namely, CAIX, sparing anti-target expressing healthy organs, thus enabling efficient in vivo pharmaco-delivery applications.
- the ligands may exhibit a particularly low dissociation constant and/or enzyme isoform specificity, and may be suitable for targeted delivery of a payload, such as a therapeutic and/or diagnostic agent, to a site afflicted by or at risk of disease or disorder characterized by expression of CAIX.
- CAIX Carbonic anhydrase IX
- RRC Renal Cell Carcinoma
- CAIX-targeting antibodies i.e., Girentuximab
- urothelial cancer NCT05046665
- renal cell carcinoma NCT02883153
- NCT02497599 NCT03849118
- nivolumab for the treatment of kidney cancer
- CAIX ligands undergo clinical development as imaging or therapeutic agents (monotherapy or in combination with other therapeutic modalities) against various types of malignancies.
- Acetazolamide for example, has been tested in combination with platinum against localized small cell lung cancer (NCT03467360) and with temozolomide against malignant glioma (NCT03011671).
- SLC-0111 is investigated as monotherapy against solid tumors (NCT02215850) or in combination with gemicitabine for metastatic pancreatic ductal cancer (NCT03450018).
- DTP348 has been tested as radiosensitizer for solid tumors (NCT02216669).
- E7070 has been investigated for the treatment of gastric cancer (NCTO0165594), metastatic breast cancer (NCT00080197), solid tumors (NCT00003976, NCT00003981), renal cell carcinoma (NCT00059735), stage IV melanoma (NCT00014625) and as combination treatment for metastatic breast cancer (NCT00165880) and metastatic colorectal ccaanncceerr (NCT00165867, NCT00165854).
- [F-18JVM4-037 was applied as imaging agent for different cancers (NCT00884520).
- COX-2 inhibitor celecoxib has also been investigated in the background of CAIX inhibition to treat cervical intraepithelial neoplasia (NCT00081263), alongside radiation and surgery for advanced head and neck cancer (NCT04162873) and in combination with immunomodulators or chemotherapy against colorectal cancer (NCT01729923), colorectal cancer metastatic to the liver (NCT03403634) and early stage triple negative breast cancer (NCT04081389).
- CA Carbonic Anhydrases
- Sulfonamides are a well-known class of carbonic anhydrase inhibitors.
- Sulfonamides with high affinity towards CAIX e.g., acetazolamide
- SMDCs Small Molecule-Drug Conjugates
- Sulfonamides typically coordinate to the zinc ion within the highly conserved active site of CAs.
- Sulfonamide-based CA-binders are therefore pan-isotype CA ligands and inhibitors, with only few selective candidates all of which remain cross-reactive with one or more isotypes.
- Due to expression of CAs in healthy tissues there is a need to identify specific CAIX ligands to further improve targeted delivery of diagnostic or therapeutic agents to the site of disease, e.g., by providing high-affinity ligands allowing low dosage, and/or by reducing off-target toxicity.
- the present invention aims at the problem of providing improved binders (ligands) of a target enzyme, namely, CAIX, suitable for targeting applications.
- the binders should be suitable for binding to or inhibition of the target enzyme, and/or targeted delivery of a payload, such as a therapeutic and/or diagnostic agent, to a site afflicted by or at risk of disease or disorder characterized by expression of CAIX.
- FIG. 1 shows LC-MS chromatogram and mass spectrum of intermediate 11. m/z calculated for C 31 H 39 CI 3 N 7 O 1 1 S 2 [M+H] + : 854.1209.
- FIG. 2 shows LC-MS chromatogram and mass spectrum of intermediate 12. m/z calculated for C 31 H 39 CI 3 N 7 O 1 1 S 2 [M+H] + : 854.1209.
- FIG. 3 shows LC-MS chromatogram and mass spectrum of intermediate I3. m/z calculated for C 31 H 39 CI 3 N 7 O 1 1 S 2 [M+H] + : 854.1209.
- FIG. 4 shows LC-MS chromatogram and mass spectrum of intermediate I4, also referred to as compound C9. m/z calculated for C 31 H 39 CI 3 N 7 O 1 1 S 2 [M+H] + : 854.1209.
- FIG. 5 shows LC-MS chromatogram and mass spectrum of intermediate 15. m/z calculated for C 19 H 31 N 8 O 10 S 2 [M+H] + : 595.1599.
- FIG. 6 shows LC-MS chromatogram and mass spectrum of intermediate 16. m/z calculated for
- FIG. 7 shows LC-MS chromatogram and mass spectrum of intermediate I7. m/z calculated for C 18 H 17 CI 3 N 3 O 6 S 2 [M+H] + : 539.9619.
- FIG. 8 shows LC-MS chromatogram and mass spectrum of intermediate I8. m/z calculated for C 12 H 15 CIN 3 O 6 S 2 [M+H] + : 396.0085.
- FIG. 9 shows LC-MS chromatogram and mass spectrum of intermediate I9. m/z calculated for C 15 H 17 CI 2 N 2 O 4 [M+H] + : 359.0560.
- FIG. 10 shows LC-MS chromatogram and mass spectrum of intermediate 110. m/z calculated for C 27 H 28 N 3 O 7 S [M+H] + : 538.1642.
- FIG. 11 shows LC-MS chromatogram and mass spectrum of compound 01. m/z calculated for C 52 H 49 CI 3 N 7 O 17 S 2 [M+H] + : 1212.1686.
- FIG. 12 shows LC-MS chromatogram and mass spectrum of compound 03. m/z calculated for C 52 H 49 CI 3 N 7 O 17 S 2 [M+H] + : 1212.1686.
- FIG. 13 shows LC-MS chromatogram and mass spectrum of compound C5. m/z calculated for C 52 H 49 CI 3 N 7 O 17 S 2 [M+H] + : 1212.1686.
- FIG. 14 shows LC-MS chromatogram and mass spectrum of compound 07. m/z calculated for C 52 H 49 CI 3 N 7 O 17 S 2 [M+H] + : 1212.1686.
- FIG. 15 shows mass spectrum of compound C2. m/z calculated for C 80 H 97 CI 3 N 9 O 24 S 6 [M+H] + :
- FIG. 16 shows mass spectrum of compound C4. m/z calculated for C 80 H 97 CI 3 N 9 O 24 S 6 [M+H] + :
- FIG. 17 shows mass spectrum of compound C6. m/z calculated for C 80 H 97 CI 3 N 9 O 24 S 6 [M+H] + :
- FIG. 18 shows mass spectrum of C10. m/z calculated for C 80 H 97 CI 3 N 9 O 24 S 6 [M+H] + : 1864.4031 .
- FIG. 19 shows LC-MS chromatogram and mass spectrum of compound 08. m/z calculated for C 45 H 42 CI 3 N 6 O 12 S 3 [M+H] + : 1059.1083.
- FIG. 20 shows LC-MS chromatogram and mass spectrum of compound C12. m/z calculated for C 39 H 40 CIN 6 O 12 S 3 [M+H] + : 915.1549.
- FIG. 21 shows LC-MS chromatogram and mass spectrum of compound C13. m/z calculated for C4 2 H 42 Cl 2 N 5 O 10 S [M+H] + : 878.2024.
- FIG. 22 shows LC-MS chromatogram and mass spectrum of compound C11. m/z calculated for c 50 H 69 Cl 3 N 11°20 s 2 [M+H] + : 1312.3222.
- FIG. 23 shows HPLC chromatogram of [ 177 Lu]LuCl 3 (A) and [ 177 Lu]Lu- C11 (B). The signal was recorded with a radio-detector.
- FIG. 24 shows LC-MS chromatogram and mass spectrum of compound C14. m/z calculated for C 32 H 30 CIN 4 O 10 S 3 [M+H] + : 761.0807.
- FIG. 25 shows LC-MS chromatogram and mass spectrum of compound C15. m/z calculated for c 40 H 42 N 9 O 15 S 3 [M+H] + : 984.1957.
- FIG. 26 shows affinity measurement of compounds C1, C3, C5, C7, C8, C12, C13 and C14 by fluorescence polarization (FP) against CAIX. Error bars indicate the standard deviation of three replicates.
- FIG. 27 shows affinity measurements of compound C7 and AAZ* by fluorescence polarization against CAIX and respective isozymes. Error bars indicate the standard deviation of three replicates.
- FIG. 28 shows I VIS imaging of SKRC-52 tumor bearing Balb/c nude mice 4 hours post intravenous injection with compound C10, 02, C4 and 06 (left to right).
- the SKRC-52 tumor area is indicated with a white circle. Selective targeting was observed for compound 010 while no preferential accumulation at the tumor sites was observed for the other stereoisomers.
- FIG. 30 shows binder selections against Carbonic Anhydrase IX (CAIX), a marker of hypoxia and of renal cell carcinoma.
- A Chemical structures of compounds C1 to C14.
- B Chemical structures of L1 to L10.
- C Evaluation of compound C9 binding capacity by surface plasmon resonance (SPR) against CAIX (left panel) and CAI I (right panel).
- SPR surface plasmon resonance
- Compound C9 was immobilized on a CM5 chip (at 963 RUs) and subjected to a serial dilution of the respective protein (16.6 ⁇ M to 1.1 ⁇ M).
- E Flow cytometry analysis of SK-RC-52 tumor cells treated with compounds C1, C3, C5, C7 in comparison to the non-stained control (cells alone).
- hCAIX human carbonic anhydrase IX
- RSA rat serum albumin
- HSA human serum albumin
- CSA cynomolgus monkey serum albumin
- MSA mouse serum albumin
- Rabbit SA rabbit serum albumin
- BSA bovine serum albumin
- OVA ovalbumin
- Hgb haemoglobin
- AGP alpha(1)-acid glycoprotein
- hlgG4 human immunoglobulin G4
- CD cluster of differentiation
- NKp46 natural killer cell p46-related protein
- NKG2D natural killer group 2D
- IL-9/-15Z-23 interleukin 9/15/23
- LZM lysozyme
- WDR5 WD repeat-containing protein 5
- CREBBP CREB-binding protein
- TEAD TEA domain family member 1
- CTSB cathepsin B
- TCPTP T-cell protein tyrosine phosphatase
- TN T-cell protein
- FIG. 32 shows Fluorescence polarization measurements of compound C7 against serum proteins (A), immune-targets (B) and non-related protein targets (C) for selectivity profiling. Measurements were performed in triplicates.
- FIG. 33 shows affinity measurements of compounds C16, C17 and C18 by fluorescence polarization against hCAIX (A) and the isozymes bCAII (B), showing that similar affinity towards CAIX and selectivity over CAI I is achieved with these compounds (C).
- FIG. 34 shows FP measurements of C19-C23 against CAIX. Error bars indicate the standard deviation of three replicates.
- FIG. 35 shows FP measurements of I-387, C8, C19 and I-383.
- the assay was performed at 5 nM final ligand concentration. Error bars indicate the standard deviation of three replicates.
- the present invention relates to potent, stereospecific ligands of, inter alia, CAIX, with a particularly low dissociation constant (e.g., in the nanomolar range).
- the ligands of the invention can be applied as selective inhibitor or targeting agents to disease-relevant tissue, e.g., associated with CAIX expression.
- the ligands of the invention can be suitably conjugated with various therapeutic and/or diagnostic payloads, including, e.g., fluorophores, radiometal chelators, cytotoxic agents, immunomodulatory agents and therapeutic proteins.
- the binders provided herein can have pharmaceutical potential. For instance, selective CAIX binders are provided herein which do not react with other carbonic anhydrases. Traditionally, it has been difficult to isolate sulfonamides with high isoform-selectivity against carbonic anhydrases.
- derivatives provided herein can display more than 100-fold selectivity for CAIX over other carbonic anhydrases, selectively localized to tumors in vivo, as confirmed by the results, e.g. in FIG. 27 and FIG. 28.
- AAZ* bound to all tested carbonic anhydrases with high affinity (bovine CAII, human CAIV, human CAXII and human CAXIV).
- the present invention provides CAIX ligands with surprisingly high isozyme selectivity.
- CAIX-specific targeting agents may facilitate the delivery of cytotoxic agents, and may be used as adaptor for universal CAR-T cell conditioning therapy.
- Derivatives described herein can exhibit surprising synergistic affinity enhancement. This is confirmed by the results presented herein, e.g., in FIG. 26.
- the 2-(2,4-dichlorophenyl)acetic acid proline derivative (compound C13) did not bind to CAIX.
- Derivatives described therein can also exhibit highly stereoselective binding. Only one of the four possible stereoisomers revealed strong binding of the ligand to CAIX. Thus, herein provided are well-defined, potent ligands with surprisingly high binding affinity. The high stereospecificity translated to high isozyme selectivity to CAIX over other carbonic anhydrases (bovine CAII, human CAIV, human CAXII and human CAXIV). We compared the CAIX ligand of the invention to a fluorescent acetazolamide derivative (AAZ*), which is one of the most prominent CAIX binders applied for targeted therapy. This is confirmed by the results presented herein.
- AAZ* fluorescent acetazolamide derivative
- FIG. 34 shows that incorporation of a 5-amino-1,3,4- thiadiazole-2-sulfonamide derivative in the ligands led to further increase of affinity towards CAIX.
- FIG. 35 shows that the CAIX binding affinity of the ligands is substantially maintained irrespective of variations in the linker B.
- an antibody e.g., a therapeutically and/or diagnostically useful protein
- a protein e.g., a therapeutically and/or diagnostically useful protein
- C’-S- denotes a thiolyl group on a side chain of an amino acid forming part of the protein.
- the surprising technical effects related to target binding to are associated with the particular structure of the small binding moieties A. That is, an improvement for compounds comprising moiety A over a corresponding compound not having such moiety is expected to be observed.
- the compounds of the present invention can have an increased affinity, slower dissociation rate with respect to the target(s) as compared to prior art compounds, and therefore are also considered to as having a prolonged residence at the disease site at a therapeutically or diagnostically relevant level, preferably beyond 1 h, more preferably beyond 6 h post injection.
- the highest enrichment is achieved after
- Moiety A is represented by the following structure: wherein R 1 , R 2 , R, a and b are as defined elsewhere herein. Groups particularly suitable as R 1 and/or R 2 are provided in the below Table 4. Table 4. Overview of building blocks suitable as R 1 and/or R 2 and the respective codes (A.../B%) as used in the Examples section.
- a particularly preferred structure of moiety A exhibiting very high target selectivity, stereospecificity and binding affinity for CAIX is:
- Moiety B is a covalent bond or a moiety comprising a chain of atoms that covalently attaches A to the payload C, e.g., through one or more covalent bond(s).
- the moiety B may be cleavable or non-cleavable, multifunctional moiety which can be used to link one or more payload and/or binder moieties to form the targeted conjugate of the invention.
- moiety B is a multifunctional moiety linking one or more moieties C and/or moieties A.
- B can be a single bond, or an optionally substituted C 1 -50 aliphatic group, In which optionally one or more carbon atoms can be replaced by a heteroatom, a C 3-12 carbocyclic or a C 1- 12 heterocyclic group, and which can be saturated optionally contain one or more double or triple bonds.
- the structure of the compound comprises more than one, preferably 2 or 3 moieties A per molecule.
- the structure of the compound may comprise more than one moieties C, preferably 2 or 3 moieties C per molecule.
- the structure of the compound comprises 2 moleties A and 1 moiety C, or 2 moieties A and 1 moiety C per molecule.
- Moiety B can comprise or consist of a unit shown in Table 5 below wherein the substituents R and R n shown in the formulae may suitably be independently selected from H, halogen, substituted or unsubstituted (hetero)alkyl, (hetero)alkenyl, (hetero)alkynyl, (hetero)aryl, (hetero)arylalkyl, (hetero)cycloalkyl, (hetero)cycloalkylaryl, heterocyclylalkyl, a peptide, an oligosaccharide or a steroid group.
- substituents R and R n shown in the formulae may suitably be independently selected from H, halogen, substituted or unsubstituted (hetero)alkyl, (hetero)alkenyl, (hetero)alkynyl, (hetero)aryl, (hetero)arylalkyl, (hetero)cycloalkyl, (
- each of R, R 1 , R 2 and R 3 is independently selected from H, OH, SH, NH2, halogen, cyano, carboxy, alkyl, cycloalkyl, aryl and heteroaryl, each of which is substituted or unsubstituted.
- R and R n are independently selected from H, or C1-C7 alkyl or heteroalkyl. More suitably, R and R n are independently selected from H, methyl or ethyl. Table 5
- Moiety B, unit(s) B L and/or unit(s) B S may suitably comprise as a cleavable bond a disulfide linkage since these linkages are stable to hydrolysis, while giving suitable drug release kinetics at the target in vivo, and can provide traceless cleavage of drug moieties including a thiol group.
- Moiety B, unit(s) B L and/or unit(s) B S may be polar or charged in order to improve water solubility of the conjugate.
- the linker may comprise from about 1 to about 20, suitably from about 2 to about 10, residues of one or more known water-soluble oligomers such as peptides, oligosaccharides, glycosaminoglycans, polyacrylic acid or salts thereof, polyethylene glycol, polyhydroxyethyl (meth) acrylates, polysulfonates, etc.
- the linker may comprise a polar or charged peptide moiety comprising e.g. from 2 to 10 amino acid residues.
- Amino acids may refer to any natural or non-natural amino acid.
- the peptide linker suitably includes a free thiol group, preferably a N-terminal cysteine, for forming the said cleavable disulfide linkage with a thiol group on the drug moiety.
- a free thiol group preferably a N-terminal cysteine
- Any peptide containing L- or D-aminoacids can be suitable; particularly suitable peptide linkers of this type are Asp-Arg-Asp-Cys and/or Asp-Lys-Asp-Cys.
- moiety B, unit(s) B L and/or unit(s) B S may comprise a cleavable or non- cleavable peptide unit that is specifically tailored so that it will be selectively enzymatically cleaved from the drug moiety by one or more proteases on the cell surface or the extracellular regions of the target tissue.
- the amino acid residue chain length of the peptide unit suitably ranges from that of a single amino acid to about eight amino acid residues.
- Numerous specific cleavable peptide sequences suitable for use in the present invention can be designed and optimized in their selectivity for enzymatic cleavage by a particular tumor-associated enzyme e.g. a protease.
- Cleavable peptides for use in the present invention include those which are optimized toward the proteases MMP-1 , 2 or 3, or cathepsin B, C or D. Especially suitable are peptides cleavable by Cathepsin B.
- Cathepsin B is a ubiquitous cysteine protease. It is an intracellular enzyme, except in pathological conditions, such as metastatic tumors or rheumatoid arthritis.
- An example for a peptide cleavable by Cathepsin B is containing the sequence Val-Cit.
- the moiety B and in particular, unit(s) B L suitably further comprise(s) self-immolative moiety can or cannot be present after the linker.
- the self-immolative linkers are also known as electronic cascade linkers. These linkers undergo elimination and fragmentation upon enzymatic cleavage of the peptide to release the drug in active, preferably free form.
- the conjugate is stable extracellularly in the absence of an enzyme capable of cleaving the linker.
- the linker upon exposure to a suitable enzyme, the linker is cleaved initiating a spontaneous self-immolative reaction resulting in the cleavage of the bond covalently linking the self-immolative moiety to the drug, to thereby effect release of the drug in its underivatized or pharmacologically active form.
- the self-immolative linker is coupled to the binding moiety through an enzymatically cleavable peptide sequence that provides a substrate for an enzyme to cleave the amide bond to initiate the self-immolative reaction.
- the drug moiety is connected to the self-immolative moiety of the linker via a chemically reactive functional group pending from the drug such as a primary or secondary amine, hydroxyl, sulfhydryl or carboxyl group.
- PABC self-immolative linkers
- PAB para-aminobenzyloxycarbonyl
- the amide bond linking the carboxy terminus of a peptide unit and the para-aminobenzyl of PAB may be a substrate and cleavable by certain proteases.
- the linker comprises a glucuronyl group that is cleavable by glucoronidase present on the cell surface or the extracellular region of the target tissue. It has been shown that lysosomal beta-glucuronidase is liberated extracellularly in high local concentrations in necrotic areas in human cancers, and that this provides a route to targeted chemotherapy (Bosslet, K. et al. Cancer Res. 58, 1195- 1201 (1998)).
- the moiety B suitably further comprises a spacer unit.
- a spacer unit can be the unit B S , which may be linked to the binding moiety A, for example via an amide, amine or thioether bond.
- the spacer unit is of a length that enables e.g. the cleavable peptide sequence to be contacted by the cleaving enzyme (e. g. cathepsin B) and suitably also the hydrolysis of the amide bond coupling the cleavable peptide to the self-immolative moiety X.
- Spacer units may for example comprise a divalent radical such as alkylene, arylene, a heteroarylene, repeating units of alkyloxy (e.g.
- polyethylenoxy PEG, polymethyleneoxy
- alkylamino e.g. polyethyleneamino
- diacid ester and amides including succinate, succinamide, diglycolate, malonate, and caproamide.
- * represents a point of attachment to moiety A or a point of attachment for which the shortest path to moiety A comprises less atoms than that for •, as the case may be; and • represents a point of attachment a point of attachment to moiety C or a point of attachment to moiety C for which the shortest path to moiety C comprises less atoms than that for *, as the case may be.
- a reactive moiety L is present rather than payload moiety C.
- each * represents a point of attachment for which the shortest path to moiety A comprises less atoms than that for •; and each • represents a point of attachment for which the shortest path to moiety C comprises less atoms than that for *, with the proviso that when n is > 1 and a respective point of attachment is indicated on any one of R a , R b and R c , then it can be independently present in one or more of the peptide monomeric units, preferably in one peptide monomeric unit most distant from the other point of attachment indicated in the respective structure.
- the terms “peptide”, “dipeptide”, “tripeptide”, “tetrapeptide” etc. refer to peptide mono- or oligomers having a backbone formed by proteinogenic and/or a non- proteinogenic amino acids.
- aminoacyl or “aminoacid” generally refer to any proteinogenic or a non-proteinogenic amino acid.
- the side-chain residues of a proteinogenic or a non-proteinogenic amino acid are represented by any of R a , R b and R c , each of which is selected from the following list:
- each of R, R 1 R 2 and R 3 is independently selected from H, OH, SH, NH 2 , halogen, cyano, carboxy, alkyl, cycloalkyl, aryl and heteroaryl, each of which is substituted or unsubstituted; each X is independently selected from NH, NR, S, O and CH 2 , preferably NH; and each n and m is independently an integer preferably selected from 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 , 12, 13, 14, 15, 16, 17, 18, W and 20.
- side-chain residues of a proteinogenic or a non- proteinogenic amino acid are represented by any of R a , R b , R c , R d and R e , each of which may be part of a 3-, 4-, 5-, 6- or 7-membered ring.
- the side chain alpha, beta and/or gamma position of said proteinogenic or non-proteinogenic amino acid can be part of a cyclic structure selected from an azetidine ring, pyrrolidine ring and a piperidine ring, such as in the following aminoacids (proline and hydroxyproline): each of which may independently be part of an unsaturated structure (i.e. wherein the H atom geminal to the respective group R a , R b and R c is absent), e.g.:
- peptide sequences refers to a sequence from N to C terminus, and attachment of group through a horizontal bond (here: moiety C) means covalent attachment to the peptide backbone via amide bond to the respective terminal amino acid (here: AA3):
- moiety C means covalent attachment to the peptide backbone via amide bond to the respective terminal amino acid (here: AA3):
- moiety C means covalent attachment via the sidechain of the respective amino acid (here: AA 3 ):
- non-proteinogenic amino acids can be selected from the following list:
- Moiety C in the present invention represents a payload, which can be generally any atom (including H), molecule or particle.
- moiety C is not a hydrogen atom.
- the payload may be a chelator for radiolabeling.
- the radionuclide is not released.
- Chelators are well known to those skilled in the art, and for example, include chelators such as sulfur colloid, diethylenetriaminepentaacetic acid (DTPA), ethylenediaminetetraacetic acid (EDTA), 1,4,7,10- tetraazacyclododecane-N,N',N",N” , -tetraacetic acid (DOTA), 1 ,4,7,10-tetraazacyclododececane,N- (glutaric acid)-N',N",N"'-triacetic acid (DOTAGA), 1,4,7-triazacyclononane-N,N',N"-triacetic acid (NOTA), 1 ,4,8,11-tetraazacyclotetradecane-N,N',N",N” , -tetraacetic acid (TETA), or any of the preferred chelator
- the payload may be a radioactive group comprising or consisting of radioisotope including isotopes such as , preferably, positron emitters, such as 18 F and 124 I or gamma emitters, such as are usec
- the radioisotope is In a further preferred embodiment the radioisotope is 68 Ga.
- the payload may be a chelate of a radioactive isotope, preferably of an isotope listed under above, with a chelating agent, preferably a chelating agent listed herein.
- the payload may be a fluorophore group, preferably selected from a xanthene dye, acridine dye, oxazine dye, cyanine dye, styryl dye, coumarine dye, porphine dye, fluorescent metal-ligand-complex, fluorescent protein, nanocrystals, perylene dye, boron-dipyrromethene dye and phtalocyanine dye, more preferably selected from the structures listed herein.
- the payload may be a cytotoxic and/or cytostatic agent.
- cytotoxic agents can inhibit or prevent the function of cells and/or cause destruction of cells.
- cytotoxic agents include radioactive isotopes, chemotherapeutic agents, and toxins such as small molecule toxins or enzymatically active toxins of bacterial, fungal, plant or animal origin, including synthetic analogues and derivatives thereof.
- the cytotoxic agent may be selected from the group consisting of an auristatin, a DNA minor groove binding agent, a DNA minor groove alkylating agent, an enediyne, a lexitropsin, a duocarmycin, a taxane, a puromycin, a dolastatin, a maytansinoid and a vinca alkaloid or a combination of two or more thereof.
- Preferred cytotoxic and/or cytostatic payload moieties are listed herein.
- the payload is a chemotherapeutic agent selected from the group consisting of a topoisomerase inhibitor, an alkylating agent (e.g., nitrogen mustards; ethylenimes; alkylsulfonates; triazenes; piperazines; and nitrosureas), an antimetabolite (e.g., mercaptopurine, thioguanine, 5- fluorouracil), an antibiotics (e.g., anthracyclines, dactinomycin, bleomycin, adriamycin, mithramycin.
- a chemotherapeutic agent selected from the group consisting of a topoisomerase inhibitor, an alkylating agent (e.g., nitrogen mustards; ethylenimes; alkylsulfonates; triazenes; piperazines; and nitrosureas), an antimetabolite (e.g., mercaptopurine, thioguanine, 5- fluor
- dactinomycin a mitotic disrupter (e.g., plant alkaloids - such as vincristine and/or microtubule antagonists -such as paclitaxel), a DNA methylating agent, a DNA intercalating agent (e.g., carboplatin and/or cisplatin, daunomycin and/or doxorubicin and/or bleomycin and/or thalidomide), a DNA synthesis inhibitor, a DNA- RNA transcription regulator, an enzyme inhibitor, a gene regulator, a hormone response modifier, a hypoxia-selective cytotoxin (e.g., tirapazamine), an epidermal growth factor inhibitor, an anti-vascular agent (e.g., xanthenone 5,6-dimethylxanthenone-4-acetic acid), a radiation-activated prodrug (e.g., nitroarylmethyl quaternary (NMQ) salts) or a bioreductive drug or a combination of two or more
- the chemotherapeutic agent may selected from the group consisting of Erlotinib (TARCEVA®), Bortezomib (VELCADE®), Fulvestrant (FASLODEX®), Sutent (SU11248), Letrozole (FEMARA®), Imatinib mesylate (GLEEVEC®), PTK787/ZK 222584, Oxaliplatin (Eloxatin®.), 5-FU (5-fluorouracil), Leucovorin, Rapamycin (Sirolimus, RAPAMUNE®.), Lapatinib (GSK572016), Lonafarnib (SCH 66336), Sorafenib (BAY43-9006), and Gefitinib (IRESSA®.), AG1478, AG1571 (SU 5271 ; Sugen) or a combination of two or more thereof.
- TARCEVA® Erlotinib
- VELCADE® Bortezomib
- FASLODEX® Fulvestrant
- the chemotherapeutic agent may be an alkylating agent - such as thiotepa, CYTOXAN® and/or cyclosphosphamide; an alkyl sulfonate - such as busulfan, improsulfan and/or piposulfan; an aziridine - such as benzodopa, carboquone, meturedopa and/or uredopa; ethylenimines and/or methylamelamines - such as altretamine, triethylenemelamine, triethylenepbosphoramide, triethylenethiophosphoramide and/or trimethylomelamine; acetogenin - such as bullatacin and/or bullatacinone; camptothecin; bryostatin; callystatin; cryptophycins; dolastatin; duocarmycin; eleutherobin; pancratistatin; sarcodictyin; spongistatin; nitrogen mustards
- doxorubicin - such as morpholinodoxorubicin, cyanomorpholino-doxorubicin, 2-pyrrolino-doxorubicin and/or deoxydoxorubicin, epirubicin, esorubicin, idarubicin, marcellomycin, mitomycins - such as mitomycin C, mycophenolic acid, nogalamycin, olivomycins, peplomycin, potfiromycin, puromycin, quelamycin, rodorubicin, streptonigrin, streptozocin, tubercidin, ubenimex, zinostatin, zorubicin; anti-metabolites - such as methotrexate and 5-fluorouracil (5- FU); folic acid analogues - such as denopterin, methotrexate, pteropterin, trimetrexate; purine analogues - such as fludarablne, 6-mercaptopurine, thiamlprin
- paclitaxel paclitaxel, abraxane, and/or TAXOTERE®, doxetaxel; chloranbucil; GEMZAR®.
- gemcitabine 6-thioguanine; mercaptopurine; methotrexate; platinum analogues - such as cisplatin and carboplatin; vinblastine; platinum; etoposide; ifosfamide; mitoxantrone; vincristine; NAVELBINE®, vinorelbine; novantrone; teniposide; edatrexate; daunomycin; aminopterin; xeloda; ibandronate; topoisomerase inhibitor RFS 2000; difluoromethylomithine (DMFO); retinoids - such as retinoic acid; capecitabine; and pharmaceutically acceptable salts, acids, derivatives or combinations of two or more of any of the above.
- platinum analogues - such as
- the payload may be a tubulin disruptor including but are not limited to: taxanes - such as paclitaxel and docetaxel, vinca alkaloids, dlscodermolide, epothilones A and B, desoxyepothilone, cryptophycins, curacin A, combretastatin A-4-phosphate, BMS 247550, BMS 184476, BMS 188791 ; LEP, RPR 109881 A, EPO 906, TXD 258, ZD 6126, vinflunine, LU 103793, dolastatin 10, E7010, T138067 and T900607, colchicine, phenstatin, chaicones, indanocine, T138067, oncocidin, vincristine, vinblastine, vinorelbine, vinflunine, halichondrin B, isohomohalichondrin B, ER-86526, pironetin, spongistatin 1 , spike
- the payload may be a DNA intercalator including but are not limited to: acridines, actinomycins, anthracyclines, benzothiopyranoindazoles, pixantrone, crisnatol, brostallicin, CI-958, doxorubicin (adriamycin), actinomycin D, daunorubicin (daunomycin), bleomycin, idarubicin, mitoxantrone, cyclophosphamide, melphalan, mitomycin C, bizelesin, etoposide, mitoxantrone, SN-38, carboplatin, cis- acceptable salts, acids, derivatives or combinations of two or more of any of the above.
- a DNA intercalator including but are not limited to: acridines, actinomycins, anthracyclines, benzothiopyranoindazoles, pixantrone, crisnatol
- the payload may be an anti-hormonal agent that acts to regulate or inhibit hormone action on tumors - such as anti-estrogens and selective estrogen receptor modulators, Including, but not limited to, tamoxifen, raloxifene, droloxifene, 4-hydroxytamoxifen, trioxifene, keoxifene, LY117018, onapristone, and/or fareston toremifene and pharmaceutically acceptable salts, acids, derivatives or combinations of two or more of any of the above.
- an anti-hormonal agent that acts to regulate or inhibit hormone action on tumors - such as anti-estrogens and selective estrogen receptor modulators, Including, but not limited to, tamoxifen, raloxifene, droloxifene, 4-hydroxytamoxifen, trioxifene, keoxifene, LY117018, onapristone, and/or fareston toremifene and pharmaceutically acceptable salts, acids
- the payload may be an aromatase inhibitor that inhibits the enzyme aromatase, which regulates estrogen production in the adrenal glands - such as, for example, 4(5)-imidazoles, aminoglutethimide, megestrol acetate, AROMASIN®. exemestane, formestanie, fadrozole, RIVISOR®. vorozole, FEMARA®. letrozole, and ARIMIDEX® and/or anastrozole and pharmaceutically acceptable salts, acids, derivatives or combinations of two or more of any of the above.
- an aromatase inhibitor that inhibits the enzyme aromatase, which regulates estrogen production in the adrenal glands - such as, for example, 4(5)-imidazoles, aminoglutethimide, megestrol acetate, AROMASIN®. exemestane, formestanie, fadrozole, RIVISOR®. vorozole, FEMARA®. letrozole, and ARIM
- the payload may be an anti-androgen such as flutamide, nilutamide, bicalutamide, leuprolide, goserelin and/or troxacitabine and pharmaceutically acceptable salts, acids, derivatives or combinations of two or more of any of the above.
- an anti-androgen such as flutamide, nilutamide, bicalutamide, leuprolide, goserelin and/or troxacitabine and pharmaceutically acceptable salts, acids, derivatives or combinations of two or more of any of the above.
- the payload may be a protein or an antibody.
- the payload is a cytokine (e.g., an interleukin such as IL2, IL10, IL12, IL15; a member of the TNF superfamily; or an interferon such as interferon gamma.).
- cytokine e.g., an interleukin such as IL2, IL10, IL12, IL15; a member of the TNF superfamily; or an interferon such as interferon gamma.
- Any payload may be used in unmodified or modified form. Combinations of payloads in which some are unmodified and some are modified may be used.
- the payload may be chemically modified.
- One form of chemical modification is the derivatisation of a carbonyl group - such as an aldehyde.
- the payload moiety C is a topoisomerase inhibitor; preferably camptothecin (CPT) or a derivative thereof; more preferably derived (e.g., by replacing a hydrogen atom) from topotecan, irinotecan, silatecan, cositecan, exatecan, lurtotecan, gimatecan, belotecan, rubitecan; even more preferably exatecan; even more preferably wherein each n is 0, 1 , 2, 3, 4, 5 or 6; and most preferably
- moiety C is an auristatin (i.e., having a structure derived from an auristatin compound family member) or an auristatin derivative. More preferably, moiety C has a structure according to the following formula: wherein:
- R d1 is independently H or C 1 -C 6 alkyl; preferably H or CH 3 ; is independently C 1 -C 6 alkyl; preferably CH3 or iPr;
- R d3 is independently H or C 1 -C 6 alkyl; preferably H or CH3;
- R d4 is independently H, C 1 -C 6 alkyl, COO(C 1 -C 6 alkyl), CON(H or C 1 -C 6 alkyl), C 3 -C 10 aryl or C 3 -C 10 heteroaryl; preferably H, CH 3 , COOH, COOCH 3 or thiazolyl;
- R d5 is independently H, OH, C 1 -C 6 alkyl; preferably H or OH; and
- R d6 is independently C 3 -C 1 0 aryl or C 3 -C 1 0 heteroaryl; preferably optionally substituted phenyl or pyridyl.
- moiety C is derived from MMAE or MMAF.
- moiety C has a structure according to the following formula: wherein: n is 0, 1 , 2, 3, 4 or 5; preferably 1 ;
- R 1e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH;
- R 2e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; each R 3e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; R 4e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; and
- X is O, NH or S; preferably O.
- moiety C has a structure according to the following formula: wherein: n is 0, 1 , 2, 3, 4 or 5; preferably 1 R 1f is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH;
- R 2f is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH;
- R 3f is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; and X is O, NH or S; preferably O
- Preferred compounds according to the present invention may be represented by: wherein B S , B L , x, y and n and the remaining groups are as defined elsewhere herein; more preferably most preferably
- Preferred compounds are those having a structure according to Table 1 or 3, or FIG. 30 or FIG. 31, their individual diastereoisomers, hydrates, solvates, crystal forms, individual tautomers or pharmaceutically acceptable salts thereof.
- all groups and variables are defined as further above in the present disclosure.
- a pharmaceutical composition comprising the compound according to any of the preceding aspects, and a pharmaceutically acceptable excipient.
- Such pharmaceutical composition is also disclosed for use in: (a) a method for treatment of the human or animal body by surgery or therapy or a diagnostic method practiced on the human or animal body; or (b) a method for therapy or prophylaxis of a subject suffering from or having risk for a disease or disorder; or (c) a method for guided surgery practiced on a subject suffering from or having risk for a disease or disorder; or (d) a method for diagnosis of a disease or disorder, the method being practiced on the human or animal body and involving a nuclear medicine imaging technique, such as Positron Emission Tomography (PET) or Single Photon Emission Computed T omography (SPECT); or (e) a method for targeted delivery of a therapeutic or diagnostic agent to a subject suffering from or having risk for a disease or disorder, wherein in each of the preceding (b)— (e), said disease or disorder is independently selected from hypoxia-related diseases such as cancer, preferably wherein the cancer is selected from the group consisting of breast cancer, pancreatic
- the compounds described herein may be used to treat disease.
- the treatment may be therapeutic and/or prophylactic treatment, with the aim being to prevent, reduce or stop an undesired physiological change or disorder.
- the treatment may prolong survival as compared to expected survival if not receiving treatment.
- the disease that is treated by the compound may be any disease that might benefit from treatment. This includes chronic and acute disorders or diseases including those pathological conditions which predispose to the disorder.
- cancer and "cancerous” is used in its broadest sense as meaning the physiological condition in mammals that is typically characterized by unregulated cell growth.
- a tumor comprises one or more cancerous cells.
- the therapeutically effect that is observed may be a reduction in the number of cancer cells; a reduction in tumor size; inhibition or retardation of cancer cell infiltration into peripheral organs; inhibition of tumor growth; and/or relief of one or more of the symptoms associated with the cancer.
- efficacy may be assessed by physical measurements of the tumor during the treatment, and/or by determining partial and complete remission of the cancer.
- efficacy can, for example, be measured by assessing the time to disease progression (TTP) and/or determining the response rate (RR).
- methods for treatment e.g., by therapy or prophylaxis, of a subject suffering from or having risk for a disease or disorder; or by guided surgery practiced on a subject suffering from or having risk for a disease or disorder; method for diagnosis of a disease or disorder, e.g., diagnostic method practiced on the human or animal body and/or involving a nuclear medicine imaging technique, such as Positron Emission Tomography (PET) or Single Photon Emission Computed Tomography (SPECT); method for targeted delivery of a therapeutic or diagnostic agent to a subject suffering from or having risk for a disease or disorder.
- PET Positron Emission Tomography
- SPECT Single Photon Emission Computed Tomography
- said disease or disorder may be independently selected from hypoxia-related diseases such as cancer, preferably wherein the cancer is selected from the group consisting of breast cancer, pancreatic cancer, colon cancer, multi-drug resistant colon cancer, rectal cancer, colorectal cancer, metastatic colorectal cancer, lung cancer, non-small cell lung cancer, head and neck cancer, ovarian cancer, hypopharynx cancer, nasopharynx cancer, larynx cancer, bladder cancer, cholangiocarcinoma, clear cell renal carcinoma, glioma, astrocytoma, cervix cancer and kidney cancer.
- hypoxia-related diseases such as cancer
- the cancer is selected from the group consisting of breast cancer, pancreatic cancer, colon cancer, multi-drug resistant colon cancer, rectal cancer, colorectal cancer, metastatic colorectal cancer, lung cancer, non-small cell lung cancer, head and neck cancer, ovarian cancer, hypopharynx cancer, nasopharynx cancer, larynx cancer, bladder
- the compounds described herein may be in the form of pharmaceutical compositions which may be for human or animal usage in human and veterinary medicine (e.g., as therapeutic or diagnostic compositions) and will typically comprise any one or more of a pharmaceutically acceptable diluent, carrier, or excipient.
- Acceptable carriers or diluents for therapeutic use are well known in the pharmaceutical art, and are described, for example, in Remington's Pharmaceutical Sciences, Mack Publishing Co. (A. R. Gennaro edit. 1985).
- the choice of pharmaceutical carrier, excipient or diluent can be selected with regard to the intended route of administration and standard pharmaceutical practice.
- the pharmaceutical compositions may comprise as - or in addition to - the carrier, excipient or diluent any suitable binder(s), lubricant(s), suspending agent(s), coating agent(s), solubilising agent(s).
- Preservatives, stabilisers, dyes and even flavouring agents may be provided in the pharmaceutical composition.
- preservatives include sodium benzoate, sorbic acid and esters of p- hydroxy benzoic acid.
- Antioxidants and suspending agents may be also used.
- the pharmaceutical composition may be formulated to be administered using a minipump or by a mucosal route, for example, as a nasal spray or aerosol for inhalation or ingestable solution, or parenterally in which the composition is formulated by an injectable form, for delivery, by, for example, an intravenous, intramuscular or subcutaneous route.
- the formulation may be designed to be administered by a number of routes.
- the agent If the agent is to be administered mucosally through the gastrointestinal mucosa, it should be able to remain stable during transit though the gastrointestinal tract; for example, it should be resistant to proteolytic degradation, stable at acid pH and resistant to the detergent effects of bile.
- the pharmaceutical compositions may be administered by inhalation, in the form of a suppository or pessary, topically in the form of a lotion, solution, cream, ointment or dusting powder, by use of a skin patch, orally in the form of tablets containing excipients such as starch or lactose, or in capsules or ovules either alone or in admixture with excipients, or in the form of elixirs, solutions or suspensions containing flavouring or colouring agents, or the pharmaceutical compositions can be injected parenterally, for example, intravenously, intramuscularly or subcutaneously.
- compositions may be best used in the form of a sterile aqueous solution which may contain other substances, for example, enough salts or monosaccharides to make the solution isotonic with blood.
- compositions may be administered in the form of tablets or lozenges which can be formulated in a conventional manner.
- the compound of the present invention may be administered in the form of a pharmaceutically acceptable or active salt.
- Pharmaceutical ly-acceptable salts are well known to those skilled In the art, and for example, include those mentioned by Berge et al, in J.Pharm.Sci., 66, 1-19 (1977).
- Salts include, but are not limited, to sulfate, citrate, acetate, oxalate, chloride, bromide, iodide, nitrate, bisulfate, phosphate, acid phosphate, isonicotinate, lactate, salicylate, acid citrate, tartrate, oleate, tannate, pantothenate, bitartrate, ascorbate, succinate, maleate, gentislnate, fumarate, gluconate, glucaronate, saccharate, formate, benzoate, glutamate, methanesulfonate, ethanesulfonate, benzenesulfonate, p-toluenesulfonate, and pamoate (i.e., 1 ,1 '-methylene-bis-(2-hydroxy-3-naphthoate)) salts.
- pamoate i.e., 1 ,1 '-methylene
- the routes for administration may include, but are not limited to, one or more of oral (e.g. as a tablet, capsule, or as an ingestable solution), topical, mucosal (e.g. as a nasal spray or aerosol for inhalation), nasal, parenteral (e.g. by an injectable form), gastrointestinal, intraspinal, intraperitoneal, intramuscular, intravenous, intrauterine, intraocular, intradermal, intracranial, intratracheal, intravaginal, intracerebroventricular, intracerebral, subcutaneous, ophthalmic (including intravitreal or intracameral), transdermal, rectal, buccal, vaginal, epidural, sublingual.
- oral e.g. as a tablet, capsule, or as an ingestable solution
- mucosal e.g. as a nasal spray or aerosol for inhalation
- nasal parenteral (e.g. by an injectable form)
- gastrointestinal intraspinal, intraperitoneal
- a physician will determine the actual dosage which will be most suitable for an individual subject.
- the specific dose level and frequency of dosage for any particular patient may be varied and will depend upon a variety of factors including the activity of the specific compound employed, the metabolic stability and length of action of that compound, the age, body weight, general health, sex, diet, mode and time of administration, rate of excretion, drug combination, the severity of the particular condition, and the individual undergoing therapy.
- the formulations may be packaged in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilized) condition requiring only the addition of the sterile liquid carrier, for example water, for administration.
- sterile liquid carrier for example water
- Extemporaneous injection solutions and suspensions are prepared from sterile powders, granules and tablets of the kind previously described.
- Exemplary unit dosage formulations contain a daily dose or unit daily sub-dose, or an appropriate fraction thereof, of the active ingredient.
- the compounds described herein may be prepared by chemical synthesis techniques. It will be apparent to those skilled in the art that sensitive functional groups may need to be protected and deprotected during synthesis of a compound. This may be achieved by conventional techniques, for example as described in "Protective Groups in Organic Synthesis” by T W Greene and P G M Wuts, John Wiley and Sons Inc. (1991), and by P.J.Kocienski, in “Protecting Groups", Georg Thieme Verlag (1994). It is possible during some of the reactions that any stereocentres present could, under certain conditions, be epimerised, for example if a base is used in a reaction with a substrate having an optical centre comprising a base-sensitive group. It should be possible to circumvent potential problems such as this by choice of reaction sequence, conditions, reagents, protection/deprotection regimes, etc. as is well-known in the art.
- Antibody is used in its broadest sense and covers monoclonal antibodies, polyclonal antibodies, dimers, multimers, multispecific antibodies (e.g., bispecific antibodies), veneered antibodies, antibody fragments and small immune proteins (SIPs) (see Int. J. Cancer (2002) 102, 75-85).
- An antibody is a protein generated by the immune system that is capable of recognizing and binding to a specific antigen.
- a target antigen generally has numerous binding sites, also called epitopes, recognized by CDRs on multiple antibodies. Each antibody that specifically binds to a different epitope has a different structure. Thus, one antigen may have more than one corresponding antibody.
- An antibody includes a full-length immunoglobulin molecule or an immunologically active portion of a full-length immunoglobulin molecule, i.e. a molecule that contains an antigen binding site that immunospecifically binds an antigen of a target of interest or part thereof.
- the antibodies may be of any type - such as IgG, IgE, IgM, IgD, and IgA) - any class - such as IgG 1 , lgG2, lgG3, lgG4, lgA1 and lgA2 - or subclass thereof.
- the antibody may be or may be derived from murine, human, rabbit or from other species.
- antibody fragments refers to a portion of a full length antibody, generally the antigen binding or variable region thereof.
- antibody fragments include, but are not limited to, Fab, Fab', F(ab') 2 , and Fv fragments; diabodies; linear antibodies; single domain antibodies, including dAbs, camelid V HH antibodies and the IgNAR antibodies of cartilaginous fish.
- Antibodies and their fragments may be replaced by binding molecules based on alternative non-immunoglobulin scaffolds, peptide aptamers, nucleic acid aptamers, structured polypeptides comprising polypeptide loops subtended on a non-peptide backbone, natural receptors or domains thereof. Derivative.
- a derivative includes the chemical modification of a compound.
- modifications include the replacement of a hydrogen by a halo group, an alkyl group, an acyl group or an amino group and the like.
- the modification may increase or decrease one or more hydrogen bonding interactions, charge interactions, hydrophobic interactions, van der Waals interactions and/or dipole interactions.
- Analog This term encompasses any enantiomers, racemates and stereoisomers, as well as all pharmaceutically acceptable salts and hydrates of such compounds.
- Alkyl refers to a branched or unbranched saturated hydrocarbyl radical.
- the alkyl group comprises from 1 to 100, preferably 3 to 30, carbon atoms, more preferably from 5 to 25 carbon atoms.
- alkyl refers to methyl, ethyl, propyl, butyl, pentyl, or hexyl.
- Alkenyl refers to a branched or unbranched hydrocarbyl radical containing one or more carbon-carbon double bonds.
- the alkenyl group comprises from 2 to 30 carbon atoms, preferably from 5 to about 25 carbon atoms.
- Alkynyl refers to a branched or unbranched hydrocarbyl radical containing one or more carbon-carbon triple bonds.
- the alkynyl group comprises from about 3 to about 30 carbon atoms, for example from about 5 to about 25 carbon atoms.
- Halogen refers to fluorine, chlorine, bromine or iodine, preferably fluorine or chlorine.
- Cycloalkyl refers to an alicyclic moiety, suitably having 3, 4, 5, 6, 7 or 8 carbon atoms.
- the group may be a bridged or polycyclic ring system. More often cycloalkyl groups are monocyclic. This term includes reference to groups such as cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, norbornyl, bicyclo[2.2.2]octyl and the like.
- Aryl refers to an aromatic carbocyclic ring system, suitably comprising 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 or 16 ring carbon atoms.
- Aryl may be a polycyclic ring system, having two or more rings, at least one of which is aromatic. This term includes reference to groups such as phenyl, naphthyl fluorenyl, azulenyl, indenyl, anthryl and the like.
- Diastereomers or diastereoisomers refer to stereoisomers of a compound having different configurations at one or more stereocenters in parts of the molecule other than moiety A. That is, unless specified otherwise, the stereochemical of moiety A configuration is always as represented in the respective structure, and the individual diastereomers differ in their stereochemical configuration in the in parts of the molecule other than moiety A.
- Hetero signifies that one or more of the carbon atoms of the group may be substituted by nitrogen, oxygen, phosphorus, silicon or sulfur.
- Heteroalkyl groups include for example, alkyloxy groups and alkythio groups.
- Heterocycloalkyl or heteroaryl groups herein may have from 3, 4, 5, 6, 7, 8, 9, 10, 11 , 12, 13, 14, 15 or 16 ring atoms, at least one of which is selected from nitrogen, oxygen, phosphorus, silicon and sulfur.
- a 3- to 10-membered ring or ring system and more particularly a 5- or 6-membered ring which may be saturated or unsaturated.
- oxiranyl selected from oxiranyl, azirinyl, 1 ,2-oxathiolanyl, imidazolyl, thienyl, furyl, tetrahydrofuryl, pyranyl, thiopyranyl, thianthrenyl, isobenzofuranyl, benzofuranyl, chromenyl, 2H-pyrrolyl, pyrrolyl, pyrrolinyl, pyrrolidinyl, imidazolyl, imidazolidinyl, benzimidazolyl, pyrazolyl, pyrazinyl, pyrazolidinyl, thiazolyl, isothiazolyl, dithiazolyl, oxazolyl, isoxazolyl, pyridyl, pyrazinyl, pyrimidinyl, piperidyl, piperazinyl, pyridazinyl, morpholinyl, thiomorphollny
- “Substituted” signifies that one or more, especially up to 5, more especially 1 , 2 or 3, of the hydrogen atoms in said moiety are replaced independently of each other by the corresponding number of substituents.
- the term “optionally substituted” as used herein includes substituted or unsubstituted. It will, of course, be understood that substituents are only at positions where they are chemically possible, the person skilled in the art being able to decide (either experimentally or theoretically) without inappropriate effort whether a particular substitution is possible. For example, amino or hydroxy groups with free hydrogen may be unstable if bound to carbon atoms with unsaturated (e.g. olefinic) bonds.
- the term “substituted” signifies one or more, especially up to 5, more especially 1 , 2 or 3, of the hydrogen atoms in said moiety are replaced independently of each other by the corresponding number of substituents selected from OH, SH, NH2, halogen, cyano, carboxy, alkyl, cycloalkyl, aryl and heteroaryl.
- substituents described herein may themselves be substituted by any substituent, subject to the aforementioned restriction to appropriate substitutions as recognised by the skilled person.
- any of the aforementioned substituents may be further substituted by any of the aforementioned substituents, each of which may be further substituted by any of the aforementioned substituents.
- Substituents may suitably include halogen atoms and halomethyl groups such as CF 3 and CCI 3 ; oxygen containing groups such as oxo, hydroxy, carboxy, carboxyalkyl, alkoxy, alkoyl, alkoyloxy, aryloxy, aryloyl and aryloyloxy; nitrogen containing groups such as amino, alkylamino, dialkylamino, cyano, azide and nitro; sulfur containing groups such as thiol, alkylthiol, sulfonyl and sulfoxide; heterocyclic groups which may themselves be substituted; alkyl groups, which may themselves be substituted; and aryl groups, which may themselves be substituted, such as phenyl and substituted phenyl.
- Alkyl includes substituted and unsubstituted benzyl.
- R1 is represented by
- R ⁇ a is independently a 6- to 10-membered aromatic group, a 5- to 10-membered heteroaromatic group having up to 5, preferably up to 3, heteroatoms independently selected from N, O and S, or a group represented by -C((CR(R’)) n SO 2 NR(R’))(CR(R’)) n SO 2 NR(R’), wherein R 1 a is optionally substituted, in addition to SO2NR(R’), by one or more substituents preferably represented by R 3 , wherein:
- G 1 is independently selected from C(Y), SO, SO 2 , CR(R'), triazolyl, and CR(R')triazolyl;
- G 2 is independently selected from C(Y), C(Y)NR, SONR, SO 2 NR, CR(R')NR, NRC(Y), NRSO, NR SO 2 , NRCR(R'), triazolyl, triazolyl-NR, triazolyl-CR(R'), NR-triazolyl, and CR(R')-triazolyl; each of q and s is independently selected from 0 and 1 ; r is independently selected from 0, 1 , 2, 3 and 4, preferably 2; preferably with the proviso that at least one of q and s is 1 , more preferably both q and s are 1; preferably with the proviso that q + r + s ⁇ 1, more preferably ⁇ 2, most preferably ⁇ 3; n is independently selected from 0, 1 , 2, 3, and 4, preferably 3;
- R 2 is represented by R 2a -(CR(R’))p-C(Y)-, or R 2 and the group RN- form together a residue represented by R 2a -(G 4 ) v -(CR(R’)) u -(G 3 ) t -;
- R 2a is a 6- to 10-membered aromatic group, 5- to 10-membered heteroaromatic group having up to 5, preferably up to 3, heteroatoms independently selected from N, O and S and optionally substituted by C 1 -4 alkyl, or a group represented by C 6-10 aryl-NR-C(Y)-N(R)- C 6-10 aryl-, wherein R 2a is optionally substituted with one or more substituents preferably represented by R 4 wherein;
- G 3 is independently selected from C(Y)NR, SONR, SO 2 NR, CR(R')NR, triazolyl, triazolylCR(R'), and CR(R')triazolyl;
- G 4 is independently selected from C(Y), NRC(Y), NRSO, NRSO 2 , NRCR(R'), C(Y)NR, SONR, SO 2 NR, CR(R')NR, triazolyl, NRtriazolyl, triazolylNR, CR(R')triazolyl, and triazolyl CR(R'), each of t and v is independently 0 or 1 ; u is independently selected from 0, 1 , 2, 3 and 4, preferably 3 preferably with the proviso that at least one of t and v is 1 , more preferably both t and v are 1; preferably with the proviso that t + u + v ⁇ 1 , more preferably ⁇ 2, most preferably ⁇ 3; and p is independently 1 , 2, 3 or 4, preferably 1 or 2, more preferably 1 ; wherein one or more occurrence of CR(R’) may be optionally replaced by a group independently selected from O, S, C(Y) and NR
- R B represents R 2a -(CR(R’)) p -C(Y)-N(R)- or R 2a -(G 4 ) v -(CR(R’)) u -(G 3 ).
- R 1 is represented by -C(Y)-R 1 a -SO2NR(R’);
- R 1 a is independently a 5-membered heteroaromatic group having up to 3 heteroatoms independently selected from N, O and S, and wherein the heteroaromatic group is substituted, in addition to SO2NR(R’), by one or more substituents R ⁇ ;
- R 2 is represented by R 2a -(CR(R’)) p -C(Y)-;
- R 2a is a 6- to 10-membered aromatic group, and is optionally substituted with one or more substituents R 4 ; and p is independently 1 , 2, 3 or 4, preferably 1 or 2, more preferably 1 ; wherein one or more occurrence of CR(R’) may be optionally replaced by a group independently selected from O, S and NR, with the proviso that no two O atoms are adjacent to each other; each occurrence of Y is independently selected from O, S, NR and CR(R’); each R 3 and R 4 is independently selected from: NH2, OH, COOH, COOR, C 1- 6 alkyl, C 1- 6 haloalkyl, O(C 1- 6 alkyl ), O(C 1- 6 haloalkyl), O(C 2-6 alkenyl), C 1- 6 heteroalkyl, NO 2 , C(O)NH 2 , C(O)NR(R’), CN, OXO and halogen, wherein R ⁇ and R ⁇ each independently may optionally form
- R 1 is represented by -C(Y)-R 1 a -SO 2 NR(R’);
- R 1 a is independently a 5-membered heteroaromatic group having up to 3 heteroatoms independently selected from N, O and S, and wherein the heteroaromatic group is substituted, in addition to SO2NR(R’), by one or more substituents R 3 ;
- R 2 is represented by R 2a -(CR(R’)) p -C(Y)-;
- R 2a is a 6- to 10-membered aromatic group, and is optionally substituted with one or more substituents R 4 ; and p is independently 1 or 2, preferably 1 ; each occurrence of Y is independently selected from O, S, NR and CR(R’); each R 3 and R 4 is independently selected from: NH2, OH, COOH, COOR, C 1- 6 alkyl, C 1- 6 haloalkyl, oxo and halogen; and each occurrence of R and R’ is independently H or selected from C 1- 6 -alkyl, O(C 1- 6 alkyl ), C 3-10 cycloalkyl, O( C 3-10 cycloalkyl), S(C 3-10 cycloalkyl), C 2-6 alkenyl, C 2-6 alkynyl, C 1- 6 heteroalkenyl, C 1- 6 heteroal kynyl, C 3-10 cycloalkenyl, C 1 -10 cycloheteroalkenyl, C 6-10 aryl
- R 1 a is independently a 5-membered heteroaromatic group having up to 3 heteroatoms independently selected from N, O and S, preferably thiophene, and wherein the heteroaromatic group is substituted, in addition to SO 2 NR(R’), by 1 or 2 substituents R 3 ;
- R 2a is a 6- to 10-membered aromatic group, preferably phenyl, substituted by 0, 1, 2 or 3 substituents R 4 ; p is 1; each occurrence of Y is O; and/or each R 3 and R 4 is independently selected from OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 CH 3 , OCH 2 (CH 3 ) 2 , O-cyclopropyl, OCF 3 , OCF 2 CF 3 , COOH, COOCH 3 , NO 2 , CN, F, Cl, Br and I.
- each R ⁇ and R ⁇ is independently selected from F, Cl, Br and I.
- A is represented by the following structure A 1 A 2 , or A 3 : wherein: c is independently 1 or 2, preferably 1 ; d is independently 0, 1 , 2, 3, 4 or 5, preferably 2; W is independently selected from NR, O, S, S(O) and SO 2 , and is preferably S;
- R 3a is independently selected from F, Cl, Br and I, and is preferably Cl;
- R 3b is independently selected from F, Cl, Br, I and H, and is preferably H;
- R 4a and R 4 b are each independently selected from OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 CH 3 , OCH 2 (CH 3 ) 2 , O-cyclopropyl, OCF 3 , OCF 2 CF 3 , COOH, COOCH 3 , NO 2 , CN, F, Cl, Br and I, and are each preferably Cl or OCH 3 .
- A is represented by the following structure
- a 4 The compound of aspect 9 or 10, wherein each R 3 and R 4 is independently selected from F, Cl, Br and I.
- A is represented by the following structure A-1: The compound of any of the preceding aspects, wherein A is represented by the following structure A-5: The compound of any of aspects 1 to 8, wherein A is represented by the following structure A 11 ,
- a 12 , A 13 or A 14 wherein: c is independently 1 or 2, preferably 1 ; d is independently 0, 1 , 2, 3, 4 or 5, preferably 1 ;
- W is independently selected from NR, O, S, S(O) and SO 2 , and is preferably S;
- R 3a is independently selected from F, Cl, Br and I
- R 3b is independently selected from F, Cl, Br, I and H, and is preferably H
- R 4C is independently selected from OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 CH 3 , OCH 2 (CH 3 ) 2 , O- cyclopropyl, OCF 3 , OCF 2 CF 3 , COOH, COOCH 3 , NO 2 , CN, F, Cl, Br and I, and is preferably NO 2 ; and
- R 4d is independently selected from H, OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 CH 3 , OCH 2 (CH 3 ) 2 , O- cyclopropyl, OCF 3 , OCF 2 CF 3 , COOH, COOCH 3 , NO 2 , CN, F, Cl, Br and I, and is preferably H.
- A is represented by the following structure A-4:
- each of W 1 , W 3 , W 4 is independently selected from CH, S, O, and N, wherein at least one is S or O, preferably wherein W 1 is S or O, more preferably wherein W 1 is S and each of and is N. 19.
- A is represented by the following structure:
- A is represented by the following structure: 22.
- A is represented by the following structure: wherein each of W 1, W 3 , W 4 is independently selected from CH, S, O, and N, wherein at least one is S or O, preferably wherein W 1 is S or O, more preferably wherein W 1 is S and each of and W 4 is N.
- each R 3 is halogen
- each R 4 is independently selected from O(C 1- 6 alkyl ), NO 2 and halogen.
- R 2a is phenyl substituted by two groups R 4 at positions 4 and 2 on the phenyl ring or wherein R 4a and R 4b are, respectively, at positions 4 and 2 of the phenyl ring, each relative to the attachment point to CR(R’).
- R 1 a is substituted by one group R 3 which is halogen
- R 2a is substituted by one or two groups R 4 each independently selected from O(C 1- 6 alkyl), NO 2 and halogen.
- R 2 is represented by a structure selected from:
- B is a single bond or an optionally substituted C 1- 50 aliphatic group, in which optionally one or more carbon atoms can be replaced by heteroatom, a C 3-12 carbocyclic or a C 1- 12 heterocyclic group, and which can be saturated or optionally contain one or more double or triple bonds; and each C is an atom, a molecule or a particle, and/or is a therapeutic or diagnostic agent.
- B is a single bond or is represented by any of the following general Formulae II— V, lla-Va or Ilb-Vb:
- B S and B L is independently selected from alkylene, cycloalkylene, arylalkylene, heteroarylalkylene, heteroalkylene, heterocycloalkylene, alkenylene, cycloalkenylene, arylalkenylene, heteroarylalkenylene, heteroalkenylene, heterocycloalenkylene, alkynylene, heteroalkynylene, arylene, heteroarylene, aminoacyl, oxyalkylene, aminoalkylene, diacid ester, dialkylsiloxane, amide, thioamide, thioether, thioester, ester, carbamate, hydrazone, thiazolidine, methylene alkoxy carbamate, disulfide, vinylene, imine, imidamide, phosphoramide, saccharide, phosphate ester, phosphoramide, carb
- B is represented by (B s ) x wherein: each x is selected from 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 and 10; each B S is independently selected from the group consisting of alkylene, cycloalkylene, arylalkylene, heteroarylalkylene, heteroalkylene, heterocycloalkylene, alkenylene, cycloalkenylene, arylalkenylene, heteroarylalkenylene, heteroalkenylene, heterocycloalenkylene, alkynylene, heteroalkynylene, arylene, heteroarylene, aminoacyl, oxyalkylene, aminoalkylene, dlacld ester, dialkylsiloxane, amide, thioamlde, thioether, thioester, ester, carbamate, hydrazone, thiazolidine, methylene alkoxy carbamate, disulfide, vinylene, imine,
- 6-alkyl C 3-10 cycloalkyl, O(C 3-10 cycloalkyl), S(C 3-10 cycloalkyl), C 2-6 alkenyl, C 2-6 alkynyl, C 1- 6 heteroalkenyl, C 1- 6 heteroal kynyl, C 3-10 cycloalkenyl, C 1 -10 cycloheteroalkenyl, C 6-10 aryl, C 1 -10 heteroaryl, (C 6-10 aryl)C 1- 6 alkyl and ( C 1 -10 heteroaryl)C 1- 6 alkyl, each of which can be optionally substituted with from 1 to 3 substituents selected from C 1- 6 -alkyl, OH, oxo and halogen.
- each * represents a point of attachment for which the shortest path to a moiety A comprises less atoms than that for •; and each • represents a point of attachment for which the shortest path to a moiety C comprises less atoms than that for *, with the proviso that when n is > 1 and a respective point of attachment is indicated on any one of R c , R d and R e , then it can be independently present in one or more of the peptide monomeric units, preferably in one peptide monomeric unit most distant from the other point of attachment indicated in the respective structure, wherein each of the above structures optionally comprises a further attachment point to a moiety A or C.
- each of AA 3 , AA 4 , AA 5 , AA 6 , AA 7 , and AA 8 represents a proteinogenic or non- proteinogenic amino acid, or is absent; wherein preferably: each proteinogenic or non-proteinogenic amino acid is preferably independently represented by one of the following structures: and/or AA 4 is an amino acid with a charged sidechain, and AA 7 is an amino acid with an aliphatic sidechain; wherein more preferably: AA 3 is selected from Asp, Glu, and Lys, or is absent; preferably Asp;
- AA 4 is selected from Arg, HomoArg, Lys, Asp, and Glu, or is absent; preferably Lys or Arg;
- AA 5 is selected from Asp, Glu, and Lys; preferably Asp;
- AA 6 is selected from Cys, Lys, Gly and Vai; preferably Cys or Lys;
- AA 7 is selected from Gly, Ala, Vai, Arg, lie, Pro; and AA 8 is selected from Pro and citrulline (Cit); even more preferably according to one of the sequences shown in the below table: or
- each -D or -B-C is independently represented by any one of the following structures:
- the moiety C is a chelating agent group suitable for radiolabeling; a radioactive group comprising a radioisotope; a chelate of a radioactive isotope with a chelating agent; a fluorophore group; a cytotoxic and/or cytostatic agent; immunomodulator agent; or a protein, wherein preferably:
- the chelating agent group suitable for radiolabeling is selected from sulfur colloid, diethylenetriaminepentaacetic acid (DTPA), ethylenediaminetetraacetic acid (EDTA), 1,4,7,10- tetraazacyclododecane-N,N',N",N” , -tetraacetic acid (DOTA), 1,4,7-triazacyclononane-N,N',N"- triacetic acid (NOTA), 1,4,8,11-tetraazacyclotetradecane-N,N',N",N” , -tetraacetic acid (TETA), iminodiacetic acid, bis(carboxymethylimidazole)glycine, 6-Hydrazinopyridine-3-carboxylic acid (HYNIC),
- n 0, 1 , 2, 3, 4 or 5; preferably 1 ;
- R 1e is independently H, COOH, aryl COOH or heteroaryl COOH; preferably COOH;
- R 2e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; each R 3e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; R 4e is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; and X is O, NH or S; preferably O; or has a structure according to the following formula: wherein: n is 0, 1 , 2, 3, 4 or 5; preferably 1
- R 1f is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH;
- R 2f is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH;
- R 3f is independently H, COOH, aryl-COOH or heteroaryl-COOH; preferably COOH; and X is O, NH or S; preferably O;
- the chelate of a radioactive isotope is a chelate of an isotope listed under (b) above and/or with a chelating agent listed under (a) above; or moiety C is a group selected from any of the following structures: wherein X is CH, O, N or S, preferably CH;
- M is a radioactive isotope, preferably selected among the list underr (b) above; more preferably:
- the fluorophore group is selected from a xanthene dye, acridine dye, oxazine dye, cyanine dye, styryl dye, coumarine dye, porphine dye, fluorescent metal-ligand-complex, fluorescent protein, nanocrystals, perylene dye, boron-dipyrromethene dye and phtalocyanine dye, preferably selected from the following structures:
- the cytotoxic and/or cytostatic agent is selected from chemotherapeutic agent selected from the group consisting of topoisomerase inhibitors, alkylating agents, antimetabolites, antibiotics, mitotic disrupters, DNA intercalating agents, DNA synthesis inhibitors, DNA-RNA transcription regulator, enzyme inhibitors, gene regulators, hormone response modifiers, hypoxia-selective cytotoxins, epidermal growth factor inhibitors, anti-vascular agents and a combination of two or more thereof, preferably selected from the following structures:
- moiety C is an auristatin derivative, preferably having a structure according to the following formula: wherein:
- R 1d is independently H or C 1 -C 6 alkyl; preferably H or CH 3 ;
- R 2d is independently C 1 -C 6 alkyl; preferably CH3 or IPr;
- R 3d is independently H or C 1 -C 6 alkyl; preferably H or CH3; R 4d is independently H, C 1 -C 6 alkyl, COO(C 1 -C 6 alkyl), CON(H or C 1 -C 6 alkyl), C 3 -C 10 aryl or
- C 3 -C 10 heteroaryl preferably H, CH 3 , COOH, COOCH 3 or thiazolyl;
- R 5d is independently H, OH, C 1 -C 6 alkyl; preferably H or OH;
- R 6d is independently C 3 -C 10 aryl or C 3 -C 10 heteroaryl; preferably optionally substituted phenyl or pyridyl, wherein preferably, moiety C is derived from MMAE or MMAF; or a topoisomerase inhibitor; preferably camptothecin (CPT) or a derivative thereof; more preferably derived (e.g., by replacing a hydrogen atom) from topotecan, irinotecan, silatecan, cositecan, exatecan, lurtotecan, gimatecan, belotecan, rubitecan, deruxtecan, DXd; even more preferably exatecan; even more preferably
- the immunomodulator agent is selected from molecules known to be able to modulate the immune system, such as ligands of CD3, CD25, TLRs, STING, 4-1 BBL, 4-1 BB, PD-1, mTor,
- the protein is selected from cytokines, such as IL2, IL10, IL12, IL15, TNF, Interferon Gamma, or is an antibody.
- cytokines such as IL2, IL10, IL12, IL15, TNF, Interferon Gamma, or is an antibody.
- A-B is represented by a structure selected from:
- (b) C is represented by a structure selected from:
- the combination of A-B and C is preferably selected such that the covalent bond — connecting B with C is represented by S— S, S— C, C— S, C(O)— R a , C(O)— N, C(O)— O, C(O)— N, N— C(O), N— C(O)O, N— C(S) or OC(O)— N.
- moiety A is selected from A-1 to A-5.
- moiety B is selected from B-1 to B-21.
- moiety C is selected from C-1 to C-31.
- a pharmaceutical composition comprising the compound according to any one of the preceding aspects, and a pharmaceutically acceptable excipient.
- a method for diagnosis of a disease or disorder the method being practiced on the human or animal body and involving a nuclear medicine imaging technique, such as Positron Emission Tomography (PET) or Single Photon Emission Computed Tomography (SPECT); or
- PET Positron Emission Tomography
- SPECT Single Photon Emission Computed Tomography
- a method for targeted delivery of a therapeutic or diagnostic agent to a subject suffering from or having risk for a disease or disorder 59.
- hypoxia-related diseases such as cancer
- the cancer is selected from the group consisting of breast cancer, pancreatic cancer, colon cancer, multi-drug resistant colon cancer, rectal cancer, colorectal cancer, metastatic colorec
- LC/MS Liquid-Chromatography/Mass-Spectrometry
- Solid-phase synthesis was performed with preloaded Fmoc-Lys(Boc)-Wang resin (200-400 mesh, 0.5 mmol/g; Bachem, #4003241.0005).
- resin was swollen for 30 min in dimethylformamide (DMF) previous to any reaction steps.
- Incubations were performed in 10 mL reaction columns (CEM Corporation, #32.276) on a rotator mixer (Reax 2, Heidolph Instruments GmbH & Co. KG) at room temperature.
- Resin was incubated for 2 x 15 min with 20% piperidine in DMF. After the deprotection, the resin was washed 5-10 times with DMF to remove residual piperidine.
- the acid (2 eq.), O-(7-azabenzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU, 1.9 eq.) and diisopropylethylamine (DIPEA, 4 eq.) were dissolved in DMF and added to the resin bearing chemical moieties with a free amino group. After incubation for 4 h, the resin was subsequently washed five times with DMF. Coupling efficiency could be monitored by LC-MS analysis (mini cleavage).
- Cleavage solution was prepared as following: 95% trifluoracetic acid (TFA), 2.5% water and 2.5% triisopropylsilane (TIPS). Where specified, 2.5% thioanisol and 2.5% m-cresol were added as scavengers. Highest yields were obtained when performing three consecutive cleavages (1 h at room temperature each). Cleavage fractions were combined and either directly purified via RP HPLC or precipitated in diethyl ether for subsequent purification (see below).
- TFA trifluoracetic acid
- TIPS triisopropylsilane
- the order of loading was: N-(fluorenylmethoxycarbonyl)-N6-(tert-butoxycarbonyl)-L-lysine (preloaded), N-(fluorenylmethoxycarbonyl)-L-aspartic acid tert-butyl ester, N-(fluorenylmethoxycarbonyl)- beta-alanine.
- the tripeptide linker synthesized on resin was split into four 250 mg batches (corresponding to 0.125 mmol loading capacity each). Each batch was coupled with one isomer of the proline derivative (RR, SS, RS, SR) following the standard protocol for amide couplings.
- I6 was coupled at lower equivalents (47 mg, 0.138 mmol, 1.1 eq. acid; 47.5 mg, 0.125 mmol, 1 eq. HATU and 174 ⁇ L DIPEA, 1 mmol, 8 eq. DIPEA), leaving the reaction overnight. Subsequent azide reduction was followed by coupling of 2-(2,4-dichlorophenyl)acetic acid, using 6 equivalents of the acid (154 mg, 0.75 mmol), 5 equivalents HATU (238 mg, 0.625 mmol) and 8 equivalents DIPEA (174 ⁇ L, 1 mmol). The reaction proceeded overnight at room temperature.
- the tripeptide linker Lys-Asp- ⁇ Ala-NH2 was synthesized on resin (125 mg, 0.06 mmol) as reported above and reacted with an acetazolamide derivative (4-oxo-4-[(5-sulfamoyl-1 ,3,4-thiadiazol-2-yl)amino]butanoic acid, 73 mg, 0.21 mmol, 4 eq.) in the presence of HATU (81 mg, 0.21 mmol, 4 eq.) and DIPEA (300 ⁇ L, 1 .72 mmol, 8 eq.) in DMF.
- 2-(2,4-Dichlorophenyl)acetic acid (5 mg, 23 ⁇ mol, 1 eq.) was dissolved in DMF and pre-activated for 10 min by the addition of EDC (4 ⁇ L, 23 ⁇ mol, 1 eq.), HOBt (3 mg, 23 ⁇ mol, 1 eq.) and DIPEA (15.9 ⁇ L, 91 ⁇ mol, 4 eq.).
- EDC 4 ⁇ L, 23 ⁇ mol, 1 eq.
- HOBt 3 mg, 23 ⁇ mol, 1 eq.
- DIPEA 15.9 ⁇ L, 91 ⁇ mol, 4 eq.
- 1-Tert-butyl 2-methyl (2R,4R)-4-amino-1 ,2-pyrrolidinedicarboxylate hydrochloride (6.4 mg, 23 ⁇ mol, 1 eq.) was added to the pre-activation solution and incubated for 4 h at room temperature.
- I6 (1.2 mg, 3.5 ⁇ mol, 1 eq.) was dissolved in 100 ⁇ L DMF to perform pre-activation with EDC (0.6 ⁇ L, 3.4 ⁇ mol, 1 eq.), HOBt (0.5 mg, 3.7 ⁇ mol, 1 eq.) and DIPEA (2.5 ⁇ L, 14 ⁇ mol, 4 eq.). After 10 min at room temperature, I10 (1.9 mg, 3.5 ⁇ mol, 1 eq.) was added to proceed with the coupling for 1 h at room temperature in the dark.
- 2-(2,4-Dichlorophenyl)acetic acid (3 mg, 15 ⁇ mol, 1 eq.) was dissolved in DMF and pre-activated for 10 min by the addition of EDC (2.6 ⁇ L, 15 ⁇ mol, 1 eq.), HOBt (1.8 mg, 15 ⁇ mol, 1 eq.) and DIPEA (10.5 ⁇ L, 60 ⁇ mol, 4 eq.).
- EDC 2.6 ⁇ L, 15 ⁇ mol, 1 eq.
- HOBt 1.8 mg, 15 ⁇ mol, 1 eq.
- DIPEA 10.5 ⁇ L, 60 ⁇ mol, 4 eq.
- 1-Tert-butyl 2-methyl (2R,4R)-4-amino-1,2-pyrrolidinedicarboxylate hydrochloride (4.2 mg, 15 ⁇ mol, 1 eq.) was added to the pre-activation solution and incubated for 4 h at room temperature.
- ester hydrolysis was performed for 3 h at room temperature with NaOH (150 ⁇ L 1 M NaOH aq , 150 ⁇ mol, 10 eq.) in 300 ⁇ L water:THF (1 :1). After neutralization with 1 M HCI aq , the solvent was evaporated under reduced pressure and the crude purified by RP-HPLC to give 113 as a white solid (2.3 mg, 26%).
- ester hydrolysis was performed for 3 h at room temperature with NaOH (100 ⁇ L 1 M NaOH aq , 100 ⁇ mol, 10 eq.) in 200 ⁇ L water:THF (1 :1). After neutralization with 1 M HCI a q, the solvent was evaporated under reduced pressure and the crude purified by RP-HPLC to give 115 as a white solid (5.3 mg, 80%).
- 2-(2,4-Dichlorophenyl)acetic acid (3 mg, 15 ⁇ mol, 1 eq.) was dissolved in DMF and pre-activated for 10 min by the addition of EDC (2.6 ⁇ L, 15 ⁇ mol, 1 eq.), HOBt (1.8 mg, 15 ⁇ mol, 1 eq.) and DIPEA (10.5 ⁇ L, 60 ⁇ mol, 4 eq.).
- EDC 2.6 ⁇ L, 15 ⁇ mol, 1 eq.
- HOBt 1.8 mg, 15 ⁇ mol, 1 eq.
- DIPEA 10.5 ⁇ L, 60 ⁇ mol, 4 eq.
- 1-Tert-butyl 2-methyl (2R,4R)-4-amino-1,2-pyrrolidinedicarboxylate hydrochloride (4.2 mg, 15 ⁇ mol, 1 eq.) was added to the pre-activation solution and incubated for 4 h at room temperature.
- ester hydrolysis was performed for 3 h at room temperature with NaOH (150 ⁇ L 1 M NaOH aq , 150 ⁇ mol, 10 eq.) in 300 ⁇ L water:THF (1:1). After neutralization with 1 M HCI aq , the solvent was evaporated under reduced pressure and the crude purified by RP-HPLC to give 116 as a white solid (1 .6 mg, 20%).
- 117, 118, 119, 120 and 121 were synthesized by acid (I7, 112, 113, 115 or 116) pre-activation with EDC (1 eq.), HOBt (1 eq.) and DIPEA (3 eq.) in DMF for 15 min at room temperature, followed by addition of tert-butyl N 6 -(tert-butoxycarbonyl)-L-lysinate hydrochloride (1 eq.). After 20 h at room temperature, the solvent was evaporated and TFA added.
- C19, C20, C21, C22 and C23 were synthesized by mixing amines (117, 118, 119, 120 or 121) with FITC (0.8 eq.) and DIPEA (3.5 eq.) in DMF for 45 min at room temperature.
- the mixtures were purified by RP-HPLC, resulting in the products as yellow solids: C19 (0.19 mg, 60% yield), C20 (0.1 mg, 80% yield), C21 (0.08 mg, 52% yield), C22 (0.09 mg, 60% yield), C23 (0.07 mg, 55% yield).
- Example 2 Affinity and selectivity measurements of compounds by fluorescence polarization
- a dilution series of the protein in the respective buffer typically 1 :1 was prepared to reach a volume of 5 ⁇ L per well.
- the fluorophore-conjugated compound was diluted in the protein buffer to reach a concentration of 20 nM, 10 nM (FIG. 35) or 2 nM (FIG. 34) to add 5 ⁇ L to each well.
- the plate was centrifuged (400 ref, 1 min) and incubated in the dark for 15 min previous to the measurements.
- Compound C7 and acetazolamide (AAZ*) were screened against human CAIX and CAIX isozymes (bovine CAI I, human CAIV, human CAXII and human CAXIV).
- Compound C7 was identified as highly selective CAIX ligand with low affinity to human CAXII (no fitting applicable) and no detectable binding to the other isozymes (see FIG. 27 and Table 6).
- AAZ* tightly bound to all screened carbonic anhydrases with no distinct selectivity for CAIX (see FIG. 27 and Table 6).
- the selectivity was confirmed expanding the analysis to a set of other protein targets (see FIG. 31 and 32).
- each X may independently be any of A, C, T and G; and the LNA (bodipy) is a 3’-amino modified 8-mer LNA (5’ GGCTACTA-C6-amino 3’) which has been conjugated to BODIPY-TMR-X (Thermo Fisher Scientific, #D6117), wherein the DNA have been annealed to the complementary BODIPY-modified 8-mer LNA in a 1 :1 molar ratio by mixing 25 ⁇ L of 2 ⁇ M solutions each (in PBS), to subsequently heat the mixture to 70 °C for 5 min and let the solution passively cool down to room temperature for 30 min.
- LNA LNA
- Human renal cell carcinoma cell line SKRC-52 were grown in RPMI-1640 supplemented with 10% FBS and 1x antibiotic-antimycoticum at 37 °C, 5% CO2. Cell passaging was performed every second day, using Trypsin-EDTA 0.25% to detach the cells. Cells were used to grow tumors in mice.
- Balb/c nude mice bearing subcutaneous SKRC-52 tumors (150 - 300 mm3) were injected intravenously with 3 nmol of each compound dissolved in 150 ⁇ L sterile PBS to acquire fluorescence images 4 h postinjection.
- the CAIX ligand was synthesized as DOTAGA conjugate (compound C11) to allow radiolabeling with
- mice bearing subcutaneous SKRC-52 tumors (200 - 300 mm 3 ) were injected intravenously with 3 nmol (0.85 MBq) [ 177 Lu]Lu-C11.
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| EP23800833.8A EP4612144A1 (en) | 2022-11-02 | 2023-11-02 | Carbonic anhydrase ix ligands for targeted delivery applications |
| CN202380090188.0A CN120390747A (en) | 2022-11-02 | 2023-11-02 | Carbonic anhydrase IX ligands for targeted delivery applications |
| AU2023374710A AU2023374710A1 (en) | 2022-11-02 | 2023-11-02 | Carbonic anhydrase ix ligands for targeted delivery applications |
| JP2025525246A JP2025536589A (en) | 2022-11-02 | 2023-11-02 | Carbonic anhydrase IX ligands for targeted delivery |
| MX2025005178A MX2025005178A (en) | 2022-11-02 | 2025-05-02 | Carbonic anhydrase ix ligands for targeted delivery applications |
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- 2023-11-02 WO PCT/EP2023/080619 patent/WO2024094827A1/en not_active Ceased
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Cited By (1)
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| WO2024229154A1 (en) * | 2023-05-02 | 2024-11-07 | Rayzebio, Inc. | Radiopharmaceutical compositions targeting carbonic anhydrase ix and uses thereof |
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