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WO2023151421A1 - Modified corynebacterium microorganism, and use thereof and construction method therefor - Google Patents

Modified corynebacterium microorganism, and use thereof and construction method therefor Download PDF

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WO2023151421A1
WO2023151421A1 PCT/CN2022/143761 CN2022143761W WO2023151421A1 WO 2023151421 A1 WO2023151421 A1 WO 2023151421A1 CN 2022143761 W CN2022143761 W CN 2022143761W WO 2023151421 A1 WO2023151421 A1 WO 2023151421A1
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enhanced
gene
microorganism
threonine
enzyme
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康培
宫卫波
何君
李岩
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Langfang Meihua Bio Technology Development Co Ltd
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    • C12R2001/15Corynebacterium

Definitions

  • the invention relates to the technical field of microbial engineering, in particular to a modified microorganism of the genus Corynebacterium and its application and construction method.
  • L-threonine (L-Threonin), the chemical name is ⁇ -hydroxy- ⁇ -aminobutyric acid, the molecular formula is C 4 H 9 NO 3 , and the relative molecular mass is 119.12. L-threonine is an essential amino acid. Threonine is mainly used in medicine, chemical reagents, food fortifiers, feed additives, etc.
  • threonine from oxaloacetate requires five steps of catalytic reactions, which are aspartate kinase (encoded by lysC), aspartate semialdehyde dehydrogenase (encoded by asd), and homoserine dehydrogenase (encoded by asd). Hydrogenase (encoded by hom), homoserine kinase (encoded by thrB) and threonine synthase (encoded by thrC). Hermann Sahm et al.
  • Corynebacterium glutamicum hom gene coding for a feedback-resistant homoserine dehydrogenase.[J].Journal of Bacteriology,1991,173(10):3228-3230.), lysC gene (Eikmanns B J,Eggeling L,Sahm H.Molecular aspects of lysine,threonine, and isoleucine biosynthesis in Corynebacterium glutamicum.[J].Antonie Van Leeuwenhoek,1993,64(2):145-163.).
  • the purpose of the present invention is to improve the ability of the strain to produce threonine by inactivating or weakening the expression of the Cgl0978 gene, thereby providing a threonine (L-threonine) producing strain and its construction method and application.
  • the present invention provides a modified microorganism of the genus Corynebacterium, the expression of the Cgl0978 gene of the microorganism is reduced or lost compared with the unmodified microorganism, and the The modified microorganism has enhanced threonine production capacity.
  • the same genes as the Cgl0978 gene also have genes numbered NCgl0939 and cg1116.
  • Threonine is catalyzed by threonine dehydratase to generate isoleucine.
  • the gene encoding this enzyme is ilvA, and the mainstream is to reduce the by-product of isoleucine.
  • the method is to reduce the expression level of ilvA, or inactivate ilvA.
  • Cgl0978 has the function of threonine dehydratase, and the production of isoleucine is reduced by inactivating Cgl0978, and the ability of the bacterial strain to synthesize threonine is improved.
  • Mutagenesis, site-directed mutation or homologous recombination can be used to reduce or inactivate the expression of the Cgl0978 gene (such as knocking out the endogenous Cgl0978 gene).
  • the activity of enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the microorganism is enhanced; wherein, the threonine synthesis pathway and/or precursor Enzymes related to the supply pathway are selected from at least one of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, and phosphoenolpyruvate carboxylase; preferably, their reference sequences on NCBI
  • the numbers are respectively WP_003855724.1, WP_003854900.1, WP_011013816.1, WP_011014465.1, or amino acid sequences with a similarity of 90% to the above reference sequence.
  • the microorganism is any one of the following 1 ⁇ 4:
  • the enhancement of the activity of enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the microorganism is achieved by being selected from the following 1) to 5), or an optional combination:
  • the Corynebacterium glutamicum described in the present invention is Corynebacterium glutamicum (Corynebacterium glutamicum), and Corynebacterium glutamicum includes ATCC13032, ATCC13870, ATCC13869, ATCC21799, ATCC21831, ATCC14067, ATCC13287 etc. (see NCBI Corunebacterium glutamicum evolutionary tree https:/ /www.ncbi.nlm.nih.gov/genome/469), more preferably Corynebacterium glutamicum ATCC 13032.
  • the present invention provides a method for constructing a threonine-producing strain, the method comprising:
  • step B Enhancing the enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the gene-weakened strain of step A to obtain a strain with enhanced enzyme activity;
  • the enhanced approach is selected from the following 1) to 5), or an optional combination:
  • the enzymes related to the threonine synthesis pathway and/or precursor supply pathway are selected from aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, phosphoenol pyruvate carboxylase at least one of .
  • the present invention provides a method for producing threonine, the method comprising the steps of:
  • step b) collecting the threonine produced from said culture obtained in step a).
  • the present invention provides the application of Cgl0978 gene attenuation or inactivation in threonine fermentation production or improvement of threonine fermentation yield.
  • the fermentation yield of threonine is improved by inactivating the Cgl0978 gene in Corynebacterium having amino acid production ability.
  • the Corynebacterium glutamicum described in the present invention is Corynebacterium glutamicum (Corynebacterium glutamicum), and Corynebacterium glutamicum includes ATCC13032, ATCC13870, ATCC13869, ATCC21799, ATCC21831, ATCC14067, ATCC13287 etc. (see NCBI Corunebacterium glutamicum evolutionary tree https:/ /www.ncbi.nlm.nih.gov/genome/469), more preferably Corynebacterium glutamicum ATCC 13032.
  • the present invention provides the use of the modified Corynebacterium genus microorganism or the threonine-producing strain constructed according to the above-mentioned method in the fermentative production of threonine or in improving the fermentative yield of threonine.
  • transformation methods of the above-mentioned related strains are transformation methods known to those skilled in the art.
  • the Cgl0978 coding region is inactivated by removing it from the genome.
  • lysC By mutating the gene lysC encoding aspartokinase, its start codon is mutated from GTG to ATG, the 311th amino acid encoded by it is changed from threonine to isoleucine, and the lysC gene is changed from Psod Initiates transcription, culminating in expression enhancement and deregulation of aspartokinase.
  • the nucleotide sequence of Psod is shown in SEQ ID NO.37.
  • the Cgl0978 inactivated strain is applied to threonine production, and the threonine yield can be increased by 20.8-51.2% compared with that before the modification, and the isoleucine content can be reduced from 0.8g/L to 0.2g/L.
  • the inactivated Cgl0978 is further enhanced and reconciled with the expression of at least one of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, and phosphoenolpyruvate carboxylase in the threonine synthesis pathway.
  • the yield of threonine is increased, and the yield of isoleucine, a downstream product of threonine, is decreased, which provides a new idea for improving the production capacity of threonine.
  • Aspartokinase encoded gene name lysC, NCBI number: cg0306, Cgl0251, NCgl0247;
  • Threonine synthase encoding gene name thrC, NCBI number: cg2437, Cgl2220, NCgl2139;
  • Phosphoenolpyruvate carboxylase encoding gene ppc, NCBI number: cg1787, Cgl1585, NCgl1523.
  • the model strain ATCC13032 was used as the starting strain to construct the inactivated strain of Cgl0978, and it was found that the inactivation of Cgl0978 had no effect on the strain. Since the model strain ATCC13032 is not a threonine-producing bacterium, it is foreseeable that the inactivation of Cgl0978 has no obvious effect on the strain of.
  • the present invention firstly constructed a strain with threonine production capacity, first deregulated and strengthened the expression of aspartokinase, and then By deregulating and enhancing the expression of homoserine dehydrogenase, the modified strain SMCT363 with threonine production capacity was obtained.
  • the threonine yield of SMCT363 was 2.4g/L, and the isoleucine content was 0.3g/L.
  • the threonine yield of the modified strain SMCT364 obtained by inactivating Cgl0978 of SMCT363 was 2.9 g/L, the isoleucine content was 0.1 g/L, the isoleucine content was reduced, and the threonine yield was increased by 20.8%.
  • threonine-producing strains SMCT365 and SMCT366 were further constructed, which respectively express enhanced and deregulated pyruvate carboxylase and phosphoenolpyruvate on the basis of SMCT363 carboxylase. And further inactivated Cgl0978 to obtain modified strains SMCT367 and SMCT368, the threonine yields of the modified strains increased by 30% and 41.2% respectively compared with those without inactivation of Cgl0978.
  • the modified strain SMCT369 was obtained by strengthening and deregulating phosphoenolpyruvate carboxylase, and then Cgl0978 was inactivated to obtain SMCT370. g/L.
  • Inactivation or weakening during the transformation process includes promoter replacement, ribosome binding site changes, point mutations, and sequence deletions.
  • Expression enhancement during transformation includes promoter replacement and ribosome binding site changes. , copy number increase, plasmid overexpression and other means, and the above means are well known to researchers in the field. The above means cannot be exhausted by examples, so the embodiments of the present invention only use promoter enhancement and point mutations as representatives for illustration.
  • the upstream homology arm up was obtained by PCR amplification with the P145/P146 primer pair, and the downstream homology arm dn was obtained by PCR amplification with the P147/P148 primer pair. Fusion PCR was performed as a template to obtain the full-length fragment ⁇ Cgl0978.
  • pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, transformed into Trans1T1 competent cells, and obtained the recombinant plasmid pK18mobsacB- ⁇ Cgl0978
  • the upstream homology arm up was obtained by PCR amplification with the P21/P22 primer pair
  • the promoter fragment Psod was obtained by PCR amplification with the P23/P24 primer pair
  • the P25/P26 primer The pair was amplified by PCR to obtain lysC g1a-T311I
  • the downstream homology arm dn was obtained by PCR amplification with the P27/P28 primer pair. Fusion PCR was carried out with P21/P24 primer pair and up and Psod as templates to obtain the fragment up-Psod.
  • the full-length fragment up-Psod-lysC g1a-T311I -dn was obtained by fusion PCR with P21/P28 primer pair and up-Psod, lysC g1a -T311I , dn as templates.
  • pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P sod -lysC g1a-T311I .
  • PCR amplification was performed with the P29/P30 primer pair to obtain the upstream homology arm up, and the ATCC14067 genome was used as a template to perform PCR amplification with the P31/P32 primer pair to obtain the promoter fragment PcspB
  • the ATCC13032 genome was used as a template to obtain hom G378E by PCR amplification with P33/P34 primer pair, and the downstream homology arm dn was obtained by PCR amplification with P35/P36 primer pair.
  • Fusion PCR was carried out with P29/P32 primer pair and up and PcspB as templates to obtain the fragment up-PcspB.
  • the full-length fragment up-PcspB-hom G378E -dn was obtained by fusion PCR with P29/P36 primer pair and up-PcspB, hom G378E , dn as template.
  • pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P cspB -hom G378E .
  • the upstream homology arm up was obtained by PCR amplification with the P13/P14 primer pair
  • the promoter fragment Psod was obtained by PCR amplification with the P15/P16 primer pair
  • the P17/P18 primer The pair was amplified by PCR to obtain pyc P458S
  • the downstream homology arm dn was obtained by PCR amplification with the P19/P20 primer pair.
  • the fragment up-Psod was obtained.
  • Fusion PCR was performed with P13/P20 primer pair and up-Psod, pyc P458S and dn as templates to obtain the full-length fragment up-Psod-pyc P458S -dn.
  • pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P sod -pyc P458S .
  • the upstream homology arm up was obtained by PCR amplification with the P53/P54 primer pair
  • the promoter fragment Ptuf was obtained by PCR amplification with the P55/P56 primer pair
  • the P57/P58 primer The ppc D299N was obtained by PCR amplification
  • the downstream homology arm dn was obtained by PCR amplification with the P59/P60 primer pair. Fusion PCR was performed with P53/P56 primer pair and up and Ptuf as templates to obtain the fragment up-Ptuf.
  • the full-length fragment up-Ptuf-ppc D299N -dn was obtained by fusion PCR with P53/P60 primer pair and up-Ptuf, ppc D299N and dn as templates.
  • pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P tuf -ppc D299N .
  • ATCC13032 competent cells were prepared according to the classical method of glutamicum (C. glutamicum Handbook, Chapter 23).
  • the recombinant plasmid pK18mobsacB-Psod-lysC g1a-T311I was used to transform the competent cells by electroporation, and the transformants were selected on the selection medium containing 15 mg/L kanamycin, in which the target gene was inserted into the chromosome due to homology middle.
  • the screened transformants were cultured overnight in common liquid brain-heart infusion medium at a temperature of 30° C. on a rotary shaker at 220 rpm.
  • the transformants undergo a second recombination, whereby the vector sequence is removed from the genome by gene exchange.
  • the culture was serially diluted (from 10 -2 to 10 -4 ), the diluted solution was spread on common solid brain heart infusion medium containing 10% sucrose, and cultured at 33°C for 48 hours. Strains grown on sucrose media do not carry the inserted vector sequence in their genome.
  • the target sequence was amplified by PCR and analyzed by nucleotide sequencing, and the target mutant strains were obtained and named SMCT362 respectively.
  • the lysC gene was mutated, its start codon was mutated from GTG to ATG, the 311th amino acid encoded by it was changed from threonine to isoleucine, and the promoter of lysC gene was replaced with a strong promoter Psod.
  • SMCT362 For the strain construction method, refer to the above 1), using SMCT362 as the starting strain, carry out the modification of homoserine dehydrogenase expression enhancement and deregulation (pK18mobsacB-P cspB -hom G378E is introduced into SMCT362), and the obtained modified strain is named SMCT363.
  • the hom gene was further mutated, and the corresponding amino acid mutation site was G378E, and the promoter of the hom gene was replaced with a strong promoter PcspB.
  • SMCT363 was used as the starting bacteria to carry out the modification of pyruvate carboxylase expression enhancement and deregulation (pK18mobsacB-P sod -pyc P458S was introduced into SMCT363), and the obtained modified strain was named SMCT365.
  • the pyc gene is further mutated, the corresponding amino acid mutation site is P458S, and the promoter of the pyc gene is replaced by a strong promoter P sod .
  • the strain construction method refers to the above 1), using SMCT363 and SMCT365 as the starting bacteria, the transformation of phosphoenolpyruvate carboxylase expression enhancement and deregulation (introducing pK18mobsacB-P tuf -ppc D299N into SMCT363 and SMCT365), the obtained transformation
  • the strains were named SMCT366, SMCT369.
  • the ppc gene was further mutated, the corresponding amino acid mutation site was D299N, and the promoter of the ppc gene was replaced with a strong promoter P tuf .
  • strain genotype SMCT361 ATCC13032, ⁇ Cgl0978 SMCT362 ATCC13032, P sod -lysC g1a-T311I SMCT363 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E SMCT364 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , ⁇ Cgl0978 SMCT365 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , P sod -pyc P458S SMCT366 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , P tuf -ppc D299N SMCT3
  • Embodiment 3 constructs bacterial strain shaking flask verification
  • Seed activation medium BHI 3.7%, agar 2%, pH7.
  • Seed medium peptone 5/L, yeast extract 5g/L, sodium chloride 10g/L, ammonium sulfate 16g/L, urea 8g/L, potassium dihydrogen phosphate 10.4g/L, dipotassium hydrogen phosphate 21.4g /L, biotin 5mg/L, magnesium sulfate 3g/L. Glucose 50g/L, pH 7.2.
  • Fermentation medium corn steep liquor 50mL/L, glucose 30g/L, ammonium sulfate 4g/L, MOPS 30g/L, potassium dihydrogen phosphate 10g/L, urea 20g/L, biotin 10mg/L, magnesium sulfate 6g/L , ferrous sulfate 1g/L, VB1 ⁇ HCl 40mg/L, calcium pantothenate 50mg/L, nicotinamide 40mg/L, manganese sulfate 1g/L, zinc sulfate 20mg/L, copper sulfate 20mg/L, pH 7.2.
  • Seed culture Pick ATCC13032, SMCT361, SMCT363, SMCT364, SMCT365, SMCT366, SMCT367, SMCT368, SMCT369, SMCT370 slant seeds 1 ring and connect them to a 500mL Erlenmeyer flask containing 20mL seed medium, 30°C, 220r/ Min shake culture 16h.
  • Fermentation culture inoculate 2 mL of seed solution into a 500 mL Erlenmeyer flask containing 20 mL of fermentation medium, and culture at 33° C. and 220 r/min for 24 hours with shaking.
  • the threonine yields of different Cgl0978 inactivation strains are different, ranging from 0.9g/L to 3.6g/L, indicating that the inactivation of Cgl0978 and the combination of different sites have different effects, and when it is combined with
  • the threonine The yields were all increased by 34% to 124%.

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Abstract

Provided are a modified Corynebacterium microorganism, a construction method therefor, and the use thereof in the production of threonine. The modified Corynebacterium microorganism has a weakened or inactivated expression of Cgl0978 gene compared with unmodified microorganisms, and has an enhanced production capability for threonine and a reduced yield of isoleucine compared with the unmodified microorganisms.

Description

一种修饰的棒状杆菌属微生物及其应用与构建方法A modified Corynebacterium microorganism and its application and construction method 技术领域technical field

本发明涉及微生物工程技术领域,具体地说,涉及一种修饰的棒状杆菌属微生物及其应用与构建方法。The invention relates to the technical field of microbial engineering, in particular to a modified microorganism of the genus Corynebacterium and its application and construction method.

背景技术Background technique

L-苏氨酸(L-Threonin),化学名称为β-羟基-α-氨基丁酸,分子式为C 4H 9NO 3,相对分子质量为119.12。L-苏氨酸是一种必需的氨基酸,苏氨酸主要用于医药、化学试剂、食品强化剂、饲料添加剂等方面。 L-threonine (L-Threonin), the chemical name is β-hydroxy-α-aminobutyric acid, the molecular formula is C 4 H 9 NO 3 , and the relative molecular mass is 119.12. L-threonine is an essential amino acid. Threonine is mainly used in medicine, chemical reagents, food fortifiers, feed additives, etc.

谷氨酸棒杆菌中,由草酰乙酸生成苏氨酸需要五步催化反应,分别为天冬氨酸激酶(lysC编码)、天冬氨酸半醛脱氢酶(asd编码)、高丝氨酸脱氢酶(hom编码)、高丝氨酸激酶(thrB编码)以及苏氨酸合酶(thrC编码)。Hermann Sahm等人一直致力于高产苏氨酸的谷棒菌株的开发,并取得一定突破,获得了抗反馈抑制的hom基因(Reinscheid D J,Eikmanns B J,Sahm H.Analysis of a Corynebacterium glutamicum hom gene coding for a feedback-resistant homoserine dehydrogenase.[J].Journal of Bacteriology,1991,173(10):3228-3230.)、lysC基因(Eikmanns B J,Eggeling L,Sahm H.Molecular aspects of lysine,threonine,and isoleucine biosynthesis in Corynebacterium glutamicum.[J].Antonie Van Leeuwenhoek,1993,64(2):145-163.)。继Hermann Sahm之后,Lothar Eggling在该领域进行了进一步的探索,弱化苏氨酸利用途径中的编码基因glyA,同时过表达苏氨酸外运蛋白ThrE,使得苏氨酸的产量由49mM提高到67mM(Simic P,Willuhn J,Sahm H,et al.Identification of glyA(Encoding Serine Hydroxymethyltransferase)and Its Use Together with the Exporter ThrE To Increase l-Threonine Accumulation by Corynebacterium glutamicum[J].Applied and Environmental Microbiology,2002,68(7):3321-3327.)。In Corynebacterium glutamicum, the generation of threonine from oxaloacetate requires five steps of catalytic reactions, which are aspartate kinase (encoded by lysC), aspartate semialdehyde dehydrogenase (encoded by asd), and homoserine dehydrogenase (encoded by asd). Hydrogenase (encoded by hom), homoserine kinase (encoded by thrB) and threonine synthase (encoded by thrC). Hermann Sahm et al. have been working on the development of a high-threonine-yielding glutamicum strain, and have made a breakthrough, obtaining a hom gene that is resistant to feedback inhibition (Reinscheid D J, Eikmanns B J, Sahm H. Analysis of a Corynebacterium glutamicum hom gene coding for a feedback-resistant homoserine dehydrogenase.[J].Journal of Bacteriology,1991,173(10):3228-3230.), lysC gene (Eikmanns B J,Eggeling L,Sahm H.Molecular aspects of lysine,threonine, and isoleucine biosynthesis in Corynebacterium glutamicum.[J].Antonie Van Leeuwenhoek,1993,64(2):145-163.). Following Hermann Sahm, Lothar Eggling carried out further exploration in this field, weakening the coding gene glyA in the threonine utilization pathway, and overexpressing the threonine export protein ThrE, which increased the threonine production from 49mM to 67mM (Simic P, Willuhn J, Sahm H, et al. Identification of glyA(Encoding Serine Hydroxymethyltransferase) and Its Use Together with the Exporter ThrE To Increase l-Threonine Accumulation by Corynebacterium glutamicum[J].Applied and Environmental Microbiology, 2002, 68 (7): 3321-3327.).

但目前利用谷氨酸棒状杆菌生产苏氨酸的报道主要集中在其合成路径的解调控及过表达上,TCA循环及中央代谢等方面的报道较少。且现有报道仅对苏氨酸合成路径做了初步研究,并未形成系统。仍有必要对谷氨酸棒状杆菌生产苏氨酸进行进一步研究。However, the current reports on the production of threonine by Corynebacterium glutamicum mainly focus on the deregulation and overexpression of its synthetic pathway, and there are few reports on the TCA cycle and central metabolism. Moreover, the existing reports have only done preliminary research on the synthesis pathway of threonine, and have not formed a system. Further studies on threonine production by Corynebacterium glutamicum are still necessary.

发明内容Contents of the invention

本发明的目的是通过失活或弱化Cgl0978基因的表达使菌株生产苏氨酸的能力得到提升,从而提供一种产苏氨酸(L-苏氨酸)菌株及其构建方法与应用。The purpose of the present invention is to improve the ability of the strain to produce threonine by inactivating or weakening the expression of the Cgl0978 gene, thereby providing a threonine (L-threonine) producing strain and its construction method and application.

为了实现本发明目的,第一方面,本发明提供一种修饰的棒状杆菌属微生物,所述微生物相比于未修饰的微生物,其Cgl0978基因的表达降低或丧失,且所述微生物相比于未修饰的微生物具有增强的苏氨酸生产能力。In order to achieve the purpose of the present invention, in a first aspect, the present invention provides a modified microorganism of the genus Corynebacterium, the expression of the Cgl0978 gene of the microorganism is reduced or lost compared with the unmodified microorganism, and the The modified microorganism has enhanced threonine production capacity.

同Cgl0978基因相同的基因还有编号为NCgl0939和cg1116的基因。The same genes as the Cgl0978 gene also have genes numbered NCgl0939 and cg1116.

目前关于苏氨酸的降解路径研究较少,苏氨酸通过苏氨酸脱水酶的催化生成异亮氨酸,目前编码该酶的基因为ilvA,且主流的降低异亮氨酸的副产物的方法为降低ilvA的表达量,或者失活ilvA。本发明研究发现Cgl0978具有苏氨酸脱水酶的作用,并且通过失活Cgl0978降低了异亮氨酸的产量,提高了菌株合成苏氨酸的能力。At present, there are few studies on the degradation pathway of threonine. Threonine is catalyzed by threonine dehydratase to generate isoleucine. At present, the gene encoding this enzyme is ilvA, and the mainstream is to reduce the by-product of isoleucine. The method is to reduce the expression level of ilvA, or inactivate ilvA. The research of the present invention finds that Cgl0978 has the function of threonine dehydratase, and the production of isoleucine is reduced by inactivating Cgl0978, and the ability of the bacterial strain to synthesize threonine is improved.

可以采用诱变、定点突变或同源重组的方法来降低Cgl0978基因的表达或使其失活(如敲除内源的Cgl0978基因)。Mutagenesis, site-directed mutation or homologous recombination can be used to reduce or inactivate the expression of the Cgl0978 gene (such as knocking out the endogenous Cgl0978 gene).

进一步地,所述微生物与未修饰的微生物相比,其体内苏氨酸合成途径和/或前体供应途径相关的酶的活性增强;其中,与所述苏氨酸合成途径和/或前体供应途径相关的酶选自天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶、磷酸烯醇式丙酮酸羧化酶中的至少一种;优选地,它们在NCBI上的参考序列编号分别为WP_003855724.1、WP_003854900.1、WP_011013816.1、WP_011014465.1,或与上述参考序列相似度为90%的氨基酸序列。Further, compared with unmodified microorganisms, the activity of enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the microorganism is enhanced; wherein, the threonine synthesis pathway and/or precursor Enzymes related to the supply pathway are selected from at least one of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, and phosphoenolpyruvate carboxylase; preferably, their reference sequences on NCBI The numbers are respectively WP_003855724.1, WP_003854900.1, WP_011013816.1, WP_011014465.1, or amino acid sequences with a similarity of 90% to the above reference sequence.

优选地,所述微生物为如下①~④中的任一种:Preferably, the microorganism is any one of the following ①~④:

①Cgl0978基因的表达降低或丧失且天冬氨酸激酶和/或高丝氨酸脱氢酶活性增强的微生物;① Microorganisms with reduced or lost expression of the Cgl0978 gene and enhanced aspartokinase and/or homoserine dehydrogenase activities;

②Cgl0978基因的表达降低或丧失且天冬氨酸激酶、高丝氨酸脱氢酶和/或丙酮酸羧化酶活性增强的微生物;② Microorganisms with reduced or lost expression of Cgl0978 gene and enhanced activities of aspartokinase, homoserine dehydrogenase and/or pyruvate carboxylase;

③Cgl0978基因的表达降低或丧失且天冬氨酸激酶、高丝氨酸脱氢酶和/或磷酸烯醇式丙酮酸羧化酶活性增强的微生物;③ Microorganisms with reduced or lost expression of Cgl0978 gene and enhanced activity of aspartokinase, homoserine dehydrogenase and/or phosphoenolpyruvate carboxylase;

④Cgl0978基因的表达降低或丧失且天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶和/或磷酸烯醇式丙酮酸羧化酶活性增强的微生物。④ Microorganisms with reduced or lost expression of Cgl0978 gene and enhanced activities of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase and/or phosphoenolpyruvate carboxylase.

所述微生物体内苏氨酸合成途径和/或前体供应途径相关的酶的活性的增强是由选自以下1)~5),或任选的组合实现的:The enhancement of the activity of enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the microorganism is achieved by being selected from the following 1) to 5), or an optional combination:

1)通过导入具有所述酶的编码基因的质粒而增强;1) enhanced by introducing a plasmid having a gene encoding the enzyme;

2)通过增加染色体上所述酶的编码基因的拷贝数而增强;2) enhanced by increasing the copy number of the gene encoding said enzyme on the chromosome;

3)通过改变染色体上所述酶的编码基因的启动子序列而增强;3) Enhanced by changing the promoter sequence of the gene encoding the enzyme on the chromosome;

4)通过将强启动子与所述酶的编码基因可操作地连接而增强;4) Enhanced by operably linking a strong promoter to the gene encoding the enzyme;

5)通过对酶的氨基酸序列进行改变而增强。5) Enhanced by changing the amino acid sequence of the enzyme.

优选地,本发明所述棒杆菌为谷氨酸棒状杆菌(Corynebacterium glutamicum),谷氨酸棒状杆菌包括ATCC13032、ATCC13870、ATCC13869、ATCC21799、ATCC21831、ATCC14067、ATCC13287等(参见NCBI Corunebacterium glutamicum进化树https://www.ncbi.nlm.nih.gov/genome/469),更优选谷氨酸棒状杆菌ATCC 13032。Preferably, the Corynebacterium glutamicum described in the present invention is Corynebacterium glutamicum (Corynebacterium glutamicum), and Corynebacterium glutamicum includes ATCC13032, ATCC13870, ATCC13869, ATCC21799, ATCC21831, ATCC14067, ATCC13287 etc. (see NCBI Corunebacterium glutamicum evolutionary tree https:/ /www.ncbi.nlm.nih.gov/genome/469), more preferably Corynebacterium glutamicum ATCC 13032.

第二方面,本发明提供产苏氨酸菌株的构建方法,所述方法包括:In a second aspect, the present invention provides a method for constructing a threonine-producing strain, the method comprising:

A、弱化或失活具有氨基酸生产能力的棒杆菌中的Cgl0978基因,获得基因弱化菌株;和/或,A. Weaken or inactivate the Cgl0978 gene in corynebacteria with amino acid production ability to obtain gene weakened strains; and/or,

B、增强步骤A基因弱化菌株中与苏氨酸合成途径和/或前体供应途径相关的酶,获得酶活增强菌株;B. Enhancing the enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the gene-weakened strain of step A to obtain a strain with enhanced enzyme activity;

所述增强的途径选自以下1)~5),或任选的组合:The enhanced approach is selected from the following 1) to 5), or an optional combination:

1)通过导入具有所述酶的编码基因的质粒而增强;1) enhanced by introducing a plasmid having a gene encoding the enzyme;

2)通过增加染色体上所述酶的编码基因的拷贝数而增强;2) enhanced by increasing the copy number of the gene encoding said enzyme on the chromosome;

3)通过改变染色体上所述酶的编码基因的启动子序列而增强;3) Enhanced by changing the promoter sequence of the gene encoding the enzyme on the chromosome;

4)通过将强启动子与所述酶的编码基因可操作地连接而增强;4) Enhanced by operably linking a strong promoter to the gene encoding the enzyme;

5)通过对酶的氨基酸序列进行改变而增强;5) Enhanced by changing the amino acid sequence of the enzyme;

其中,与所述苏氨酸合成途径和/或前体供应途径相关的酶选自天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶、磷酸烯醇式丙酮酸羧化酶中的至少一种。Wherein, the enzymes related to the threonine synthesis pathway and/or precursor supply pathway are selected from aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, phosphoenol pyruvate carboxylase at least one of .

第三方面,本发明提供一种生产苏氨酸的方法,所述方法包括如下步骤:In a third aspect, the present invention provides a method for producing threonine, the method comprising the steps of:

a)培养上述微生物,以获得所述微生物的培养物;a) cultivating the above-mentioned microorganisms to obtain a culture of said microorganisms;

b)从步骤a)中获得的所述培养物中收集所产生的苏氨酸。b) collecting the threonine produced from said culture obtained in step a).

第四方面,本发明提供Cgl0978基因弱化或失活在苏氨酸发酵生产或提高苏氨酸发酵产量中的应用。In the fourth aspect, the present invention provides the application of Cgl0978 gene attenuation or inactivation in threonine fermentation production or improvement of threonine fermentation yield.

进一步地,通过失活具有氨基酸生产能力的棒杆菌(Corynebacterium)中的Cgl0978基因来提高苏氨酸的发酵产量。Further, the fermentation yield of threonine is improved by inactivating the Cgl0978 gene in Corynebacterium having amino acid production ability.

优选地,本发明所述棒杆菌为谷氨酸棒状杆菌(Corynebacterium glutamicum),谷氨酸棒状杆菌包括ATCC13032、ATCC13870、ATCC13869、ATCC21799、ATCC21831、 ATCC14067、ATCC13287等(参见NCBI Corunebacterium glutamicum进化树https://www.ncbi.nlm.nih.gov/genome/469),更优选谷氨酸棒状杆菌ATCC 13032。Preferably, the Corynebacterium glutamicum described in the present invention is Corynebacterium glutamicum (Corynebacterium glutamicum), and Corynebacterium glutamicum includes ATCC13032, ATCC13870, ATCC13869, ATCC21799, ATCC21831, ATCC14067, ATCC13287 etc. (see NCBI Corunebacterium glutamicum evolutionary tree https:/ /www.ncbi.nlm.nih.gov/genome/469), more preferably Corynebacterium glutamicum ATCC 13032.

第五方面,本发明提供所述修饰的棒状杆菌属微生物或按照上述方法构建得到的产苏氨酸菌株在苏氨酸发酵生产或提高苏氨酸发酵产量中的应用。In a fifth aspect, the present invention provides the use of the modified Corynebacterium genus microorganism or the threonine-producing strain constructed according to the above-mentioned method in the fermentative production of threonine or in improving the fermentative yield of threonine.

上述有关菌株的改造方法包括基因的强化和弱化等均为本领域技术人员可知的改造方式,参见满在伟.高产L-精氨酸钝齿棒杆菌的系统途径工程改造[D].江南大学,2016;崔毅.代谢工程改造谷氨酸棒杆菌生产L--亮氨酸[D].天津科技大学.;徐国栋.L-异亮氨酸生产菌株的构建及发酵条件优化.天津科技大学,2015。The transformation methods of the above-mentioned related strains, including gene enhancement and weakening, are transformation methods known to those skilled in the art. ,2016; Cui Yi. Metabolic engineering of Corynebacterium glutamicum to produce L--leucine [D]. Tianjin University of Science and Technology.; Xu Guodong. Construction of L-isoleucine production strain and optimization of fermentation conditions. Tianjin University of Science and Technology ,2015.

优选,本发明中,通过使Cgl0978编码区从基因组中去除,从而使其失活。Preferably, in the present invention, the Cgl0978 coding region is inactivated by removing it from the genome.

通过使编码天冬氨酸激酶的基因lysC突变,从而使其起始密码子由GTG突变为ATG,其编码的氨基酸第311位由苏氨酸变为异亮氨酸,并且使lysC基因由Psod启动转录,最终实现天冬氨酸激酶的表达强化和解调控。Psod的核苷酸序列如SEQ ID NO.37所示。By mutating the gene lysC encoding aspartokinase, its start codon is mutated from GTG to ATG, the 311th amino acid encoded by it is changed from threonine to isoleucine, and the lysC gene is changed from Psod Initiates transcription, culminating in expression enhancement and deregulation of aspartokinase. The nucleotide sequence of Psod is shown in SEQ ID NO.37.

通过使编码高丝氨酸脱氢酶的基因hom突变,从而使其编码蛋白携带G378E突变,并且使hom基因由PcspB启动转录,最终实现高丝氨酸脱氢酶的解调控和表达强化。PcspB的核苷酸序列如SEQ ID NO.38所示。By mutating the gene hom encoding homoserine dehydrogenase so that its encoded protein carries the G378E mutation, and enabling the transcription of the hom gene to be initiated by PcspB, the deregulation and expression enhancement of homoserine dehydrogenase are finally realized. The nucleotide sequence of PcspB is shown in SEQ ID NO.38.

通过使编码丙酮酸羧化酶的基因pyc突变,从而使其编码蛋白携带P458S突变,并且使pyc基因由Psod启动转录,最终实现丙酮酸羧化酶的表达强化。Psod的核苷酸序列如SEQ ID NO.37所示。By mutating the gene pyc encoding pyruvate carboxylase so that its encoded protein carries the P458S mutation, and making the pyc gene be transcribed by Psod, the expression enhancement of pyruvate carboxylase is finally realized. The nucleotide sequence of Psod is shown in SEQ ID NO.37.

通过使编码磷酸烯醇式丙酮酸羧化酶的基因ppc突变,从而使其编码蛋白携带D299N突变,并且使ppc基因由P tuf启动转录,最终实现磷酸烯醇式丙酮酸羧化酶的表达强化。P tuf的核苷酸序列如SEQ ID NO.39所示。 By mutating the gene ppc encoding phosphoenolpyruvate carboxylase, so that the encoded protein carries the D299N mutation, and the transcription of the ppc gene is initiated by P tuf , the expression enhancement of phosphoenolpyruvate carboxylase is finally realized . The nucleotide sequence of P tuf is shown in SEQ ID NO.39.

本发明的有益效果至少在于:The beneficial effects of the present invention are at least:

本发明将Cgl0978失活菌株应用于苏氨酸生产,其苏氨酸的产量较未改造之前可提高20.8-51.2%,异亮氨酸的含量可由0.8g/L下降到0.2g/L。具体地,进一步将失活Cgl0978与苏氨酸合成路径中的天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶、磷酸烯醇式丙酮酸羧化酶中的至少一个表达强化和解调控相组合时,其苏氨酸的产量均有提升,苏氨酸下游产物异亮氨酸的产量均有降低,为提升苏氨酸的生产能力提供了一个新的思路。In the present invention, the Cgl0978 inactivated strain is applied to threonine production, and the threonine yield can be increased by 20.8-51.2% compared with that before the modification, and the isoleucine content can be reduced from 0.8g/L to 0.2g/L. Specifically, the inactivated Cgl0978 is further enhanced and reconciled with the expression of at least one of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, and phosphoenolpyruvate carboxylase in the threonine synthesis pathway. When the regulation is combined, the yield of threonine is increased, and the yield of isoleucine, a downstream product of threonine, is decreased, which provides a new idea for improving the production capacity of threonine.

具体实施方式Detailed ways

下面将结合实施例对本发明的优选实施方式进行详细说明。需要理解的是以下实施 例的给出仅是为了起到说明的目的,并不是用于对本发明的范围进行限制。本领域的技术人员在不背离本发明的宗旨和精神的情况下,可以对本发明进行各种修改和替换。下述实施例中所使用的实验方法如无特殊说明,均为常规方法。下述实施例中所用的材料、试剂等,如无特殊说明,均可从商业途径得到。Preferred embodiments of the present invention will be described in detail below in conjunction with examples. It should be understood that the following examples are given for the purpose of illustration only, and are not intended to limit the scope of the present invention. Those skilled in the art can make various modifications and substitutions to the present invention without departing from the purpose and spirit of the present invention. The experimental methods used in the following examples are conventional methods unless otherwise specified. The materials and reagents used in the following examples can be obtained from commercial sources unless otherwise specified.

本发明涉及的蛋白及其编码基因如下:The proteins involved in the present invention and their coding genes are as follows:

天冬氨酸激酶,编码基因名称lysC,NCBI编号:cg0306、Cgl0251、NCgl0247;Aspartokinase, encoded gene name lysC, NCBI number: cg0306, Cgl0251, NCgl0247;

高丝氨酸脱氢酶,编码基因名称hom,NCBI编号:Cg1337、Cgl1183、NCgl1136;Homoserine dehydrogenase, encoding gene name hom, NCBI number: Cg1337, Cgl1183, NCgl1136;

苏氨酸合酶,编码基因名称thrC,NCBI编号:cg2437、Cgl2220、NCgl2139;Threonine synthase, encoding gene name thrC, NCBI number: cg2437, Cgl2220, NCgl2139;

丙酮酸羧化酶,编码基因pyc,NCBI编号:cg0791、Cgl0689、NCgl0659;Pyruvate carboxylase, encoding gene pyc, NCBI number: cg0791, Cgl0689, NCgl0659;

磷酸烯醇式丙酮酸羧化酶,编码基因ppc,NCBI编号:cg1787、Cgl1585、NCgl1523。Phosphoenolpyruvate carboxylase, encoding gene ppc, NCBI number: cg1787, Cgl1585, NCgl1523.

本发明以模式菌株ATCC13032为出发菌株单独构建Cgl0978失活菌株,发现失活Cgl0978对菌株无影响,由于模式菌株ATCC13032不是苏氨酸的生产菌,因此Cgl0978失活后对菌株无明显影响是可以预见的。In the present invention, the model strain ATCC13032 was used as the starting strain to construct the inactivated strain of Cgl0978, and it was found that the inactivation of Cgl0978 had no effect on the strain. Since the model strain ATCC13032 is not a threonine-producing bacterium, it is foreseeable that the inactivation of Cgl0978 has no obvious effect on the strain of.

为了探索Cgl0978失活是否会降低苏氨酸降解成异亮氨酸的能力,本发明首先构建了一株具备苏氨酸生产能力的菌株,首先解调控并强化天冬氨酸激酶的表达,随后解调控并强化高丝氨酸脱氢酶的表达,获得具备苏氨酸生产能力的改造菌SMCT363。SMCT363苏氨酸产量为2.4g/L,异亮氨酸含量0.3g/L。将SMCT363的Cgl0978失活后获得的改造菌SMCT364苏氨酸产量为2.9g/L,异亮氨酸含量为0.1g/L,异亮氨酸含量降低,且苏氨酸产量提高20.8%。In order to explore whether the inactivation of Cgl0978 will reduce the ability of threonine to be degraded into isoleucine, the present invention firstly constructed a strain with threonine production capacity, first deregulated and strengthened the expression of aspartokinase, and then By deregulating and enhancing the expression of homoserine dehydrogenase, the modified strain SMCT363 with threonine production capacity was obtained. The threonine yield of SMCT363 was 2.4g/L, and the isoleucine content was 0.3g/L. The threonine yield of the modified strain SMCT364 obtained by inactivating Cgl0978 of SMCT363 was 2.9 g/L, the isoleucine content was 0.1 g/L, the isoleucine content was reduced, and the threonine yield was increased by 20.8%.

为了进一步验证Cgl0978可以减少苏氨酸降解为异亮氨酸,进一步构建苏氨酸生产菌SMCT365、SMCT366,其在SMCT363的基础上分别表达强化和解调控丙酮酸羧化酶和磷酸烯醇式丙酮酸羧化酶。并进一步失活Cgl0978,获得改造菌SMCT367、SMCT368,改造菌的苏氨酸产量较未失活Cgl0978前分别提高30%和41.2%。In order to further verify that Cgl0978 can reduce the degradation of threonine to isoleucine, threonine-producing strains SMCT365 and SMCT366 were further constructed, which respectively express enhanced and deregulated pyruvate carboxylase and phosphoenolpyruvate on the basis of SMCT363 carboxylase. And further inactivated Cgl0978 to obtain modified strains SMCT367 and SMCT368, the threonine yields of the modified strains increased by 30% and 41.2% respectively compared with those without inactivation of Cgl0978.

最后在SMCT366的基础上强化和解调控磷酸烯醇式丙酮酸羧化酶获得改造菌SMCT369,然后失活Cgl0978,得到SMCT370,改造菌苏氨酸产量达到6.5g/L,异亮氨酸含量为0.2g/L。Finally, on the basis of SMCT366, the modified strain SMCT369 was obtained by strengthening and deregulating phosphoenolpyruvate carboxylase, and then Cgl0978 was inactivated to obtain SMCT370. g/L.

改造过程中的失活或弱化包括启动子的替换,核糖体结合位点的改变、点突变、序列的缺失等手段,改造过程中的表达强化包括启动子的替换,核糖体结合位点的改变、拷贝数的增加、质粒过表达等手段,且以上手段均为本领域研究人员公知手段。以上手段无法通过举例而穷尽,因此本发明中的实施例仅用启动子强化和点突变作为代表进行 说明。Inactivation or weakening during the transformation process includes promoter replacement, ribosome binding site changes, point mutations, and sequence deletions. Expression enhancement during transformation includes promoter replacement and ribosome binding site changes. , copy number increase, plasmid overexpression and other means, and the above means are well known to researchers in the field. The above means cannot be exhausted by examples, so the embodiments of the present invention only use promoter enhancement and point mutations as representatives for illustration.

实施例1菌株基因组改造质粒构建Example 1 Strain Genome Modification Plasmid Construction

1)Cgl0978失活方案重组质粒pK18mobsacB-△Cgl09781) Cgl0978 inactivation scheme recombinant plasmid pK18mobsacB-△Cgl0978

以ATCC13032基因组为模板,以P145/P146引物对进行PCR扩增得到上游同源臂up,以P147/P148引物对进行PCR扩增得到下游同源臂dn,以P145/P148引物对以up、dn为模板进行融合PCR,获得全长片段△Cgl0978。pK18mobsacB用BamHI/HindIII酶切。两者用无缝克隆试剂盒进行组装,转化Trans1T1感受态细胞,获得重组质粒pK18mobsacB-△Cgl0978Using the ATCC13032 genome as a template, the upstream homology arm up was obtained by PCR amplification with the P145/P146 primer pair, and the downstream homology arm dn was obtained by PCR amplification with the P147/P148 primer pair. Fusion PCR was performed as a template to obtain the full-length fragment △Cgl0978. pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, transformed into Trans1T1 competent cells, and obtained the recombinant plasmid pK18mobsacB-△Cgl0978

2)天冬氨酸激酶表达强化和解调控方案重组质粒pK18mobsacB-P sod-lysC g1a-T311I 2) Recombinant plasmid pK18mobsacB-P sod -lysC g1a-T311I aspartokinase expression enhancement and deregulation scheme

以谷氨酸棒状杆菌ATCC 13032基因组为模板,以P21/P22引物对进行PCR扩增得到上游同源臂up,以P23/P24引物对进行PCR扩增得到启动子片段Psod,以P25/P26引物对进行PCR扩增得到lysC g1a-T311I,以P27/P28引物对进行PCR扩增得到下游同源臂dn。以P21/P24引物对以up、Psod为模板进行融合PCR,获得片段up-Psod。以P21/P28引物对以up-Psod、lysC g1a-T311I、dn为模板进行融合PCR获得全长片段up-Psod-lysC g1a-T311I-dn。pK18mobsacB用BamHI/HindIII酶切。两者用无缝克隆试剂盒进行组装,转化Trans1T1感受态细胞,获得重组质粒pK18mobsacB-P sod-lysC g1a-T311IUsing the genome of Corynebacterium glutamicum ATCC 13032 as a template, the upstream homology arm up was obtained by PCR amplification with the P21/P22 primer pair, the promoter fragment Psod was obtained by PCR amplification with the P23/P24 primer pair, and the P25/P26 primer The pair was amplified by PCR to obtain lysC g1a-T311I , and the downstream homology arm dn was obtained by PCR amplification with the P27/P28 primer pair. Fusion PCR was carried out with P21/P24 primer pair and up and Psod as templates to obtain the fragment up-Psod. The full-length fragment up-Psod-lysC g1a-T311I -dn was obtained by fusion PCR with P21/P28 primer pair and up-Psod, lysC g1a -T311I , dn as templates. pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P sod -lysC g1a-T311I .

3)高丝氨酸脱氢酶表达强化和解调控方案重组质粒pK18mobsacB-P cspB-hom G378E 3) Recombinant plasmid pK18mobsacB-P cspB -hom G378E for homoserine dehydrogenase expression enhancement and deregulation scheme

以谷氨酸棒状杆菌ATCC 13032基因组为模板,以P29/P30引物对进行PCR扩增得到上游同源臂up,以ATCC14067基因组为模板以P31/P32引物对进行PCR扩增得到启动子片段PcspB,以ATCC13032基因组为模板以P33/P34引物对进行PCR扩增得到hom G378E,以P35/P36引物对进行PCR扩增得到下游同源臂dn。以P29/P32引物对以up、PcspB为模板进行融合PCR,获得片段up-PcspB。以P29/P36引物对以up-PcspB、hom G378E、dn为模板进行融合PCR获得全长片段up-PcspB-hom G378E-dn。pK18mobsacB用BamHI/HindIII酶切。两者用无缝克隆试剂盒进行组装,转化Trans1T1感受态细胞,获得重组质粒pK18mobsacB-P cspB-hom G378EUsing the genome of Corynebacterium glutamicum ATCC 13032 as a template, PCR amplification was performed with the P29/P30 primer pair to obtain the upstream homology arm up, and the ATCC14067 genome was used as a template to perform PCR amplification with the P31/P32 primer pair to obtain the promoter fragment PcspB, The ATCC13032 genome was used as a template to obtain hom G378E by PCR amplification with P33/P34 primer pair, and the downstream homology arm dn was obtained by PCR amplification with P35/P36 primer pair. Fusion PCR was carried out with P29/P32 primer pair and up and PcspB as templates to obtain the fragment up-PcspB. The full-length fragment up-PcspB-hom G378E -dn was obtained by fusion PCR with P29/P36 primer pair and up-PcspB, hom G378E , dn as template. pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P cspB -hom G378E .

4)丙酮酸羧化酶表达强化和解调控方案重组质粒pK18mobsacB-P sod-pyc P458S 4) Pyruvate carboxylase expression enhancement and deregulation program recombinant plasmid pK18mobsacB-P sod -pyc P458S

以谷氨酸棒状杆菌ATCC 13032基因组为模板,以P13/P14引物对进行PCR扩增得到上游同源臂up,以P15/P16引物对进行PCR扩增得到启动子片段Psod,以P17/P18引物对进行PCR扩增得到pyc P458S,以P19/P20引物对进行PCR扩增得到下游同源臂dn。以P13/P16引物对以up、Psod为模板进行融合PCR,获得片段up-Psod。以P13/P20 引物对以up-Psod、pyc P458S、dn为模板进行融合PCR获得全长片段up-Psod-pyc P458S-dn。pK18mobsacB用BamHI/HindIII酶切。两者用无缝克隆试剂盒进行组装,转化Trans1T1感受态细胞,获得重组质粒pK18mobsacB-P sod-pyc P458SUsing the genome of Corynebacterium glutamicum ATCC 13032 as a template, the upstream homology arm up was obtained by PCR amplification with the P13/P14 primer pair, the promoter fragment Psod was obtained by PCR amplification with the P15/P16 primer pair, and the P17/P18 primer The pair was amplified by PCR to obtain pyc P458S , and the downstream homology arm dn was obtained by PCR amplification with the P19/P20 primer pair. Using the P13/P16 primer pair to perform fusion PCR with up and Psod as templates, the fragment up-Psod was obtained. Fusion PCR was performed with P13/P20 primer pair and up-Psod, pyc P458S and dn as templates to obtain the full-length fragment up-Psod-pyc P458S -dn. pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P sod -pyc P458S .

5)磷酸烯醇式丙酮酸羧化酶表达强化和解调控方案重组质粒pK18mobsacB-P tuf-ppc D299N 5) Phosphoenolpyruvate carboxylase expression enhancement and deregulation program recombinant plasmid pK18mobsacB-P tuf -ppc D299N

以谷氨酸棒状杆菌ATCC 13032基因组为模板,以P53/P54引物对进行PCR扩增得到上游同源臂up,以P55/P56引物对进行PCR扩增得到启动子片段Ptuf,以P57/P58引物对进行PCR扩增得到ppc D299N,以P59/P60引物对进行PCR扩增得到下游同源臂dn。以P53/P56引物对以up、Ptuf为模板进行融合PCR,获得片段up-Ptuf。以P53/P60引物对以up-Ptuf、ppc D299N、dn为模板进行融合PCR获得全长片段up-Ptuf-ppc D299N-dn。pK18mobsacB用BamHI/HindIII酶切。两者用无缝克隆试剂盒进行组装,转化Trans1T1感受态细胞,获得重组质粒pK18mobsacB-P tuf-ppc D299NUsing the genome of Corynebacterium glutamicum ATCC 13032 as a template, the upstream homology arm up was obtained by PCR amplification with the P53/P54 primer pair, the promoter fragment Ptuf was obtained by PCR amplification with the P55/P56 primer pair, and the P57/P58 primer The ppc D299N was obtained by PCR amplification, and the downstream homology arm dn was obtained by PCR amplification with the P59/P60 primer pair. Fusion PCR was performed with P53/P56 primer pair and up and Ptuf as templates to obtain the fragment up-Ptuf. The full-length fragment up-Ptuf-ppc D299N -dn was obtained by fusion PCR with P53/P60 primer pair and up-Ptuf, ppc D299N and dn as templates. pK18mobsacB was digested with BamHI/HindIII. The two were assembled with a seamless cloning kit, and Trans1T1 competent cells were transformed to obtain the recombinant plasmid pK18mobsacB-P tuf -ppc D299N .

质粒构建过程中所用的引物如下表1所示:The primers used in the plasmid construction process are shown in Table 1 below:

表1Table 1

名称name 序列(SEQ ID No.1-36)Sequence (SEQ ID No.1-36) P13P13 AATTCGAGCTCGGTACCCGGGGATCCTGACAGTTGCTGATCTGGCTAATTCGAGCTCGGTACCCGGGGATCCTGACAGTTGCTGATCTGGCT P14P14 CCCGGAATAATTGGCAGCTATAGAGTAATTATTCCTTTCACCCGGAATAATTGGCAGCTATAGAGTAATTTTCCTTTCA P15P15 TGAAAGGAATAATTACTCTATAGCTGCCAATTATTCCGGGTGAAAGGAATAATTACTCTATAGCTGCCAATTATTCCGGG P16P16 GAAGATGTGTGAGTCGACACGGGTAAAAAATCCTTTCGTAGAAGATGTGTGAGTCGACACGGGTAAAAAATCCTTTCGTA P17P17 TACGAAAGGATTTTTTACCCGTGTCGACTCACACATCTTCTACGAAAGGATTTTTTACCCGTGTCGACTCACACATCTTC P18P18 GGTGGAGCCTGAAGGAGGTGCGAGTGATCGGCAATGAATCCGGGGTGGAGCCTGAAGGAGGTGCGAGTGATCGGCAATGAATCCGG P19P19 CCGGATTCATTGCCGATCACTCGCACCTCCTTCAGGCTCCACCCCGGATTCATTGCCGATCACTCGCACCTCCTTCAGGCTCCACC P20P20 GTAAAACGACGGCCAGTGCCAAGCTTCGCGGCAGACGGAGTCTGGGGTAAAACGACGGCCAGTGCCAAGCTTCGCGGCAGACGGAGTCTGGG P21P21 AATTCGAGCTCGGTACCCGGGGATCCAGCGACAGGACAAGCACTGGAATTCGAGCTCGGTACCCGGGGATCCAGCGACAGGACAAGCACTGG P22P22 CCCGGAATAATTGGCAGCTATGTGCACCTTTCGATCTACGCCCGGAATAATTGGCAGCTATGTGCACCTTTCGATCTACG P23P23 CGTAGATCGAAAGGTGCACATAGCTGCCAATTATTCCGGGCGTAGATCGAAAGGTGCACATAGCTGCCAATTATTCCGGG P24P24 TTTCTGTACGACCAGGGCCATGGGTAAAAAATCCTTTCGTATTTCTGTACGACCAGGGCCATGGGTAAAAAATCCTTTCGTA P25P25 TACGAAAGGATTTTTTACCCATGGCCCTGGTCGTACAGAAATACGAAAGGATTTTTTACCCATGGCCCTGGTCGTACAGAAA P26P26 TCGGAACGAGGGCAGGTGAAGGTGATGTCGGTGGTGCCGTCTTCGGAACGAGGGCAGGTGAAGGTGATGTCGGTGGTGCCGTCT P27P27 AGACGGCACCACCGACATCACCTTCACCTGCCCTCGTTCCGAAGACGGCACCACCGACATCACCTTCACCTGCCCTCGTTCCGA P28P28 GTAAAACGACGGCCAGTGCCAAGCTTAGCCTGGTAAGAGGAAACGTGTAAAACGACGGCCAGTGCCAAGCTTAGCCTGGTAAGAGGAAACGT P29P29 AATTCGAGCTCGGTACCCGGGGATCCCTGCGGGCAGATCCTTTTGAAATTCGAGCTCGGTACCCGGGGATCCCTGCGGGCAGATCCTTTTGA P30P30 ATTTCTTTATAAACGCAGGTCATATCTACCAAAACTACGCATTTCTTTATAAACGCAGGTCATATCTACCAAAAACTACGC P31P31 GCGTAGTTTTGGTAGATATGACCTGCGTTTATAAAGAAATGCGTAGTTTTGGTAGATATGACCTGCGTTTATAAAGAAAT P32P32 GTATATCTCCTTCTGCAGGAATAGGTATCGAAAGACGAAAGTATATCTCTTCTGCAGGAATAGGTATCGAAAGACGAAA P33P33 TTTCGTCTTTCGATACCTATTCCTGCAGAAGGAGATATACTTTCGTCTTTCGATACCTATTCCTGCAGAAGGAGATATAC

P34P34 TAGCCAATTCAGCCAAAACCCCCACGCGATCTTCCACATCCTAGCCAATTCAGCCAAAACCCCCACGCGATCTTCCACATCC P35P35 GGATGTGGAAGATCGCGTGGGGGTTTTGGCTGAATTGGCTAGGATGTGGAAGATCGCGTGGGGGTTTTGGCTGAATTGGCTA P36P36 GTAAAACGACGGCCAGTGCCAAGCTTGCTGGCTCTTGCCGTCGATAGTAAAACGACGGCCAGTGCCAAGCTTGCTGGCTCTTGCCGTCGATA P53P53 AATTCGAGCTCGGTACCCGGGGATCCTACGTCGTCGAGCAGACCCGAATTCGAGCTCGGTACCCGGGGATCCTACGTCGTCGAGCAGACCCG P54P54 CATTCGCAGGGTAACGGCCAAGGGTGTTGGCGTGCATGAGCATTCGCAGGGTAACGGCCAAGGGTGTTGGCGTGCATGAG P55P55 CTCATGCACGCCAACACCCTTGGCCGTTACCCTGCGAATGCTCATGCACGCCAACACCCTTGGCCGTTACCCTGCGAATG P56P56 TCGCGTAAAAAATCAGTCATTGTATGTCCTCCTGGACTTCTCGCGTAAAAAATCAGTCATTGTATGTCCTCCTGGACTTC P57P57 GAAGTCCAGGAGGACATACAATGACTGATTTTTTACGCGAGAAGTCCAGGAGGACATACAATGACTGATTTTTTACGCGA P58P58 GTGACCTTATTCATGCGGTTCGACAGGCTGAGCTCATGCTGTGACCTTATTCATGCGGTTCGACAGGCTGAGCTCATGCT P59P59 AGCATGAGCTCAGCCTGTCGAACCGCATGAATAAGGTCACAGCATGAGCTCAGCCTGTCGAACCGCATGAATAAGGTCAC P60P60 GTAAAACGACGGCCAGTGCCAAGCTTGGTGACTTGGGCGCGTTCGAGTAAAACGACGGCCAGTGCCAAGCTTGGTGACTTGGGCGCGTTCGA P145P145 AATTCGAGCTCGGTACCCGGGGATCCGCAGGCACCTTCACCACAATAATTCGAGCTCGGTACCCGGGGATCCGCAGGCACCTTCACCACAAT P146P146 CATCGAGTTCTAGAAAACACAGGCTGTGATTTCAAACGATCACACGACGCATCGAGTTCTAGAAAACACAGGCTGTGATTTCAAACGATCACACGACG P147P147 CGTCGTGTGATCGTTTGAAATCACAGCCTGTGTTTTCTAGAACTCGATGCGTCGTGTGATCGTTTGAAATCACAGCTGTGTTTTCTAGAACTCGATG P148P148 CACGACGTTGTAAAACGACGGCCAGTGCCAAGCTTGCATCCAAACGCTTCCATCTTCCACGACGTTGTAAAACGACGGCCAGTGCCAAGCTTGCATCCAAACGCTTCCATCTTC

实施例2基因组改造菌株的构建The construction of embodiment 2 genome modification bacterial strains

1)天冬氨酸激酶表达强化和解调控菌株的构建1) Construction of Aspartokinase Expression Enhanced and Deregulated Strains

按照谷棒经典方法(C.glutamicum Handbook,Charpter 23)制备ATCC13032感受态细胞。重组质粒pK18mobsacB-Psod-lysC g1a-T311I以电穿孔方法转化该感受态细胞,并在含有15mg/L卡那霉素的选择培养基上筛选转化子,其中目的基因由于同源性被插入到染色体中。将筛得的转化子过夜培养于普通液体脑心浸液培养基中,培养温度为30℃,回转摇床220rpm振荡培养。此培养过程中,转化子发生第二次重组,通过基因交换将载体序列从基因组中除去。将培养物做连续梯度稀释(10 -2连续稀释至10 -4),稀释液涂布在含有10%蔗糖的普通固体脑心浸液培养基上,33℃静置培养48h。蔗糖培养基上长出的菌株在其基因组中不携带插入的载体序列。通过PCR扩增目的序列,核苷酸测序分析,获得目的突变菌株分别命名为SMCT362。该菌株中,lysC基因被突变,其起始密码子由GTG突变为ATG,其编码的氨基酸第311位由苏氨酸变为异亮氨酸,且lysC基因的启动子被替换为强启动子Psod。 ATCC13032 competent cells were prepared according to the classical method of glutamicum (C. glutamicum Handbook, Chapter 23). The recombinant plasmid pK18mobsacB-Psod-lysC g1a-T311I was used to transform the competent cells by electroporation, and the transformants were selected on the selection medium containing 15 mg/L kanamycin, in which the target gene was inserted into the chromosome due to homology middle. The screened transformants were cultured overnight in common liquid brain-heart infusion medium at a temperature of 30° C. on a rotary shaker at 220 rpm. During this culture, the transformants undergo a second recombination, whereby the vector sequence is removed from the genome by gene exchange. The culture was serially diluted (from 10 -2 to 10 -4 ), the diluted solution was spread on common solid brain heart infusion medium containing 10% sucrose, and cultured at 33°C for 48 hours. Strains grown on sucrose media do not carry the inserted vector sequence in their genome. The target sequence was amplified by PCR and analyzed by nucleotide sequencing, and the target mutant strains were obtained and named SMCT362 respectively. In this strain, the lysC gene was mutated, its start codon was mutated from GTG to ATG, the 311th amino acid encoded by it was changed from threonine to isoleucine, and the promoter of lysC gene was replaced with a strong promoter Psod.

2)高丝氨酸脱氢酶表达强化和解调控菌株的构建2) Construction of homoserine dehydrogenase expression enhanced and deregulated strains

菌株构建方法参考上述1),以SMCT362为出发菌,进行高丝氨酸脱氢酶表达强化和解调控的改造(将pK18mobsacB-P cspB-hom G378E导入SMCT362),获得的改造菌株命名为SMCT363。该菌株中,hom基因进一步被突变,对应的氨基酸突变位点为G378E,且hom基因的启动子被替换为强启动子PcspB。 For the strain construction method, refer to the above 1), using SMCT362 as the starting strain, carry out the modification of homoserine dehydrogenase expression enhancement and deregulation (pK18mobsacB-P cspB -hom G378E is introduced into SMCT362), and the obtained modified strain is named SMCT363. In this strain, the hom gene was further mutated, and the corresponding amino acid mutation site was G378E, and the promoter of the hom gene was replaced with a strong promoter PcspB.

3)丙酮酸羧化酶表达强化和解调控菌株的构建3) Construction of Pyruvate Carboxylase Expression Enhanced and Deregulated Strains

菌株构建方法参考上述1),以SMCT363为出发菌,进行丙酮酸羧化酶表达强化和解调控的改造(将pK18mobsacB-P sod-pyc P458S导入SMCT363),获得的改造菌株命名为SMCT365。该菌株中,pyc基因进一步被突变,对应的氨基酸突变位点为P458S,且pyc基因的启动子被替换为强启动子P sodFor the strain construction method, refer to the above 1), SMCT363 was used as the starting bacteria to carry out the modification of pyruvate carboxylase expression enhancement and deregulation (pK18mobsacB-P sod -pyc P458S was introduced into SMCT363), and the obtained modified strain was named SMCT365. In this strain, the pyc gene is further mutated, the corresponding amino acid mutation site is P458S, and the promoter of the pyc gene is replaced by a strong promoter P sod .

4)磷酸烯醇式丙酮酸羧化酶表达强和解调控菌株的构建4) Construction of phosphoenolpyruvate carboxylase expression strong and deregulated strain

菌株构建方法参考上述1),以SMCT363、SMCT365为出发菌,进行磷酸烯醇式丙酮酸羧化酶表达强化和解调控的改造(将pK18mobsacB-P tuf-ppc D299N导入SMCT363、SMCT365),获得的改造菌株命名为SMCT366、SMCT369。该菌株中,ppc基因进一步被突变,对应的氨基酸突变位点为D299N,且ppc基因的启动子被替换为强启动子P tufThe strain construction method refers to the above 1), using SMCT363 and SMCT365 as the starting bacteria, the transformation of phosphoenolpyruvate carboxylase expression enhancement and deregulation (introducing pK18mobsacB-P tuf -ppc D299N into SMCT363 and SMCT365), the obtained transformation The strains were named SMCT366, SMCT369. In this strain, the ppc gene was further mutated, the corresponding amino acid mutation site was D299N, and the promoter of the ppc gene was replaced with a strong promoter P tuf .

5)Cgl0978失活菌株的构建5) Construction of Cgl0978 inactivated strain

菌株构建方法参考上述1),以ATCC13032、SMCT363、SMCT365、SMCT366、SMCT369为出发菌,进行Cgl0978失活菌株的改造(将pK18mobsacB-△Cgl0978导入上述出发菌),获得的改造菌株命名为SMCT361、SMCT364、SMCT367、SMCT368、SMCT370。该菌株中Cgl0978基因编码区丢失,从而导致其失活。Refer to the above 1) for the strain construction method, use ATCC13032, SMCT363, SMCT365, SMCT366, SMCT369 as the starting bacteria, carry out the transformation of the Cgl0978 inactivated strain (introduce pK18mobsacB-△Cgl0978 into the above starting bacteria), and the obtained modified strains are named SMCT361, SMCT364 , SMCT367, SMCT368, SMCT370. The coding region of the Cgl0978 gene was lost in this strain, resulting in its inactivation.

获得的菌株列表如下表2。The list of strains obtained is shown in Table 2 below.

表2Table 2

菌株strain 基因型genotype SMCT361SMCT361 ATCC13032,ΔCgl0978ATCC13032,ΔCgl0978 SMCT362SMCT362 ATCC13032,P sod-lysC g1a-T311I ATCC13032, P sod -lysC g1a-T311I SMCT363SMCT363 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E SMCT364SMCT364 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,ΔCgl0978 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E ,ΔCgl0978 SMCT365SMCT365 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,P sod-pyc P458S ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , P sod -pyc P458S SMCT366SMCT366 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,P tuf-ppc D299N ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , P tuf -ppc D299N SMCT367SMCT367 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,P sod-pyc P458S,ΔCgl0978 ATCC13032,P sod -lysC g1a-T311I ,P cspB -hom G378E ,P sod -pyc P458S ,ΔCgl0978 SMCT368SMCT368 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,P tuf-ppc D299N,ΔCgl0978 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , P tuf -ppc D299N , ΔCgl0978 SMCT369SMCT369 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,P sod-pyc P458S,P tuf-ppc D299N ATCC13032,P sod -lysC g1a-T311I ,P cspB -hom G378E ,P sod -pyc P458S ,P tuf -ppc D299N SMCT370SMCT370 ATCC13032,P sod-lysC g1a-T311I,P cspB-hom G378E,P sod-pyc P458S,P tuf-ppc D299N,ΔCgl0978 ATCC13032, P sod -lysC g1a-T311I , P cspB -hom G378E , P sod -pyc P458S , P tuf -ppc D299N , ΔCgl0978

实施例3构建菌株摇瓶验证Embodiment 3 constructs bacterial strain shaking flask verification

1.培养基1. Medium

种子活化培养基:BHI 3.7%,琼脂2%,pH7。Seed activation medium: BHI 3.7%, agar 2%, pH7.

种子培养基:蛋白胨5/L,酵母抽提物5g/L,氯化钠10g/L,硫酸铵16g/L,尿素8g/L,磷酸二氢钾10.4g/L,磷酸氢二钾21.4g/L,生物素5mg/L,硫酸镁3g/L。葡萄糖 50g/L,pH 7.2。Seed medium: peptone 5/L, yeast extract 5g/L, sodium chloride 10g/L, ammonium sulfate 16g/L, urea 8g/L, potassium dihydrogen phosphate 10.4g/L, dipotassium hydrogen phosphate 21.4g /L, biotin 5mg/L, magnesium sulfate 3g/L. Glucose 50g/L, pH 7.2.

发酵培养基:玉米浆50mL/L,葡萄糖30g/L,硫酸铵4g/L,MOPS 30g/L,磷酸二氢钾10g/L,尿素20g/L,生物素10mg/L,硫酸镁6g/L,硫酸亚铁1g/L,VB1·HCl40mg/L,泛酸钙50mg/L,烟酰胺40mg/L,硫酸锰1g/L,硫酸锌20mg/L,硫酸铜20mg/L,pH 7.2。Fermentation medium: corn steep liquor 50mL/L, glucose 30g/L, ammonium sulfate 4g/L, MOPS 30g/L, potassium dihydrogen phosphate 10g/L, urea 20g/L, biotin 10mg/L, magnesium sulfate 6g/L , ferrous sulfate 1g/L, VB1·HCl 40mg/L, calcium pantothenate 50mg/L, nicotinamide 40mg/L, manganese sulfate 1g/L, zinc sulfate 20mg/L, copper sulfate 20mg/L, pH 7.2.

2.工程菌摇瓶发酵生产L-苏氨酸2. Shake flask fermentation of engineering bacteria to produce L-threonine

(1)种子培养:挑取ATCC13032、SMCT361、SMCT363、SMCT364、SMCT365、SMCT366、SMCT367、SMCT368、SMCT369、SMCT370斜面种子1环接至装有20mL种子培养基的500mL三角瓶中,30℃、220r/min振荡培养16h。(1) Seed culture: Pick ATCC13032, SMCT361, SMCT363, SMCT364, SMCT365, SMCT366, SMCT367, SMCT368, SMCT369, SMCT370 slant seeds 1 ring and connect them to a 500mL Erlenmeyer flask containing 20mL seed medium, 30°C, 220r/ Min shake culture 16h.

(2)发酵培养:将2mL种子液接种至装有20mL发酵培养基的500mL三角瓶中,33℃、220r/min振荡培养24h。(2) Fermentation culture: inoculate 2 mL of seed solution into a 500 mL Erlenmeyer flask containing 20 mL of fermentation medium, and culture at 33° C. and 220 r/min for 24 hours with shaking.

(3)取1mL发酵液离心(12000rpm,2min),收集上清液,用HPLC检测工程菌与对照菌发酵液中的L-苏氨酸、异亮氨酸的浓度。(3) Take 1 mL of fermentation broth and centrifuge (12000rpm, 2min), collect the supernatant, and use HPLC to detect the concentration of L-threonine and isoleucine in the fermentation broth of engineering bacteria and control bacteria.

(4)苏氨酸摇瓶发酵结果如下表3所示。(4) Threonine shake flask fermentation results are shown in Table 3 below.

表3table 3

Figure PCTCN2022143761-appb-000001
Figure PCTCN2022143761-appb-000001

由上表可以看出,Cgl0978失活后的改造菌株的苏氨酸产量较失活前有所提高,其产量提高在20.8%~51.2%之间,苏氨酸最高产量为6.5g/L。不同的Cgl0978失活菌株之间的苏氨酸产量有所差异,在0.9g/L~3.6g/L之间,说明Cgl0978的失活与不同位点的组合有不同的效果,且当其与苏氨酸合成路径中的天冬氨酸激酶、高丝氨酸脱氢酶以及丙酮酸羧化酶、磷酸烯醇式丙酮酸羧化酶中至少一个表达强化和解调控相组合时,其苏氨酸的产量均有34%~124%的提升。It can be seen from the above table that the threonine yield of the modified strain after the inactivation of Cgl0978 is increased compared with that before the inactivation, and the yield is increased between 20.8% and 51.2%, and the highest threonine yield is 6.5g/L. The threonine yields of different Cgl0978 inactivation strains are different, ranging from 0.9g/L to 3.6g/L, indicating that the inactivation of Cgl0978 and the combination of different sites have different effects, and when it is combined with When at least one of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, and phosphoenolpyruvate carboxylase in the threonine synthesis pathway is enhanced and deregulated, the threonine The yields were all increased by 34% to 124%.

虽然,上文中已经用一般性说明及具体实施方案对本发明作了详尽的描述,但在本发明基础上,可以对之作一些修改或改进,这对本领域技术人员而言是显而易见的。因此,在不偏离本发明精神的基础上所做的这些修改或改进,均属于本发明要求保护的范围。Although the present invention has been described in detail with general descriptions and specific embodiments above, it is obvious to those skilled in the art that some modifications or improvements can be made on the basis of the present invention. Therefore, the modifications or improvements made on the basis of not departing from the spirit of the present invention all belong to the protection scope of the present invention.

Figure PCTCN2022143761-appb-000002
Figure PCTCN2022143761-appb-000002

Figure PCTCN2022143761-appb-000003
Figure PCTCN2022143761-appb-000003

Figure PCTCN2022143761-appb-000004
Figure PCTCN2022143761-appb-000004

Figure PCTCN2022143761-appb-000005
Figure PCTCN2022143761-appb-000005

Figure PCTCN2022143761-appb-000006
Figure PCTCN2022143761-appb-000006

Figure PCTCN2022143761-appb-000007
Figure PCTCN2022143761-appb-000007

Figure PCTCN2022143761-appb-000008
Figure PCTCN2022143761-appb-000008

Figure PCTCN2022143761-appb-000009
Figure PCTCN2022143761-appb-000009

Claims (9)

一种修饰的棒状杆菌属微生物,其中,所述微生物相比于未修饰的微生物,其Cgl0978基因的表达降低或丧失,且所述微生物相比于未修饰的微生物具有增强的苏氨酸生产能力。A modified microorganism of the genus Corynebacterium, wherein, compared with an unmodified microorganism, the expression of the Cgl0978 gene of the microorganism is reduced or lost, and the microorganism has an enhanced threonine production ability compared with the unmodified microorganism . 根据权利要求1所述的微生物,其中,采用诱变、定点突变或同源重组的方法来降低Cgl0978基因的表达或使其失活。The microorganism according to claim 1, wherein the expression of the Cgl0978 gene is reduced or inactivated by mutagenesis, site-directed mutation or homologous recombination. 根据权利要求1所述的微生物,其中,所述微生物与未修饰的微生物相比,其体内苏氨酸合成途径和/或前体供应途径相关的酶的活性增强;The microorganism according to claim 1, wherein, compared with the unmodified microorganism, the activity of enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the microorganism is enhanced; 其中,所述苏氨酸合成途径和/或前体供应途径相关的酶选自天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶、磷酸烯醇式丙酮酸羧化酶中的至少一种。Wherein, the enzymes related to the threonine synthesis pathway and/or precursor supply pathway are selected from aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, phosphoenolpyruvate carboxylase at least one. 根据权利要求3所述的微生物,其中,所述微生物为如下①至④中的任一种:The microorganism according to claim 3, wherein the microorganism is any one of the following ① to ④: ①Cgl0978基因的表达降低或丧失且天冬氨酸激酶和/或高丝氨酸脱氢酶活性增强的微生物;① Microorganisms with reduced or lost expression of the Cgl0978 gene and enhanced aspartokinase and/or homoserine dehydrogenase activities; ②Cgl0978基因的表达降低或丧失且天冬氨酸激酶、高丝氨酸脱氢酶和/或丙酮酸羧化酶活性增强的微生物;② Microorganisms with reduced or lost expression of Cgl0978 gene and enhanced activities of aspartokinase, homoserine dehydrogenase and/or pyruvate carboxylase; ③Cgl0978基因的表达降低或丧失且天冬氨酸激酶、高丝氨酸脱氢酶和/或磷酸烯醇式丙酮酸羧化酶活性增强的微生物;③ Microorganisms with reduced or lost expression of Cgl0978 gene and enhanced activity of aspartokinase, homoserine dehydrogenase and/or phosphoenolpyruvate carboxylase; ④Cgl0978基因的表达降低或丧失且天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶和/或磷酸烯醇式丙酮酸羧化酶活性增强的微生物。④ Microorganisms with reduced or lost expression of Cgl0978 gene and enhanced activities of aspartokinase, homoserine dehydrogenase, pyruvate carboxylase and/or phosphoenolpyruvate carboxylase. 根据权利要求3所述的微生物,其中,所述微生物体内苏氨酸合成途径和/或前体供应途径相关的酶的活性的增强是由选自以下1)至5),或任选的组合实现的:The microorganism according to claim 3, wherein, the enhancement of the activity of enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the microorganism is selected from the following 1) to 5), or an optional combination Achieved: 1)通过导入具有所述酶的编码基因的质粒而增强;1) enhanced by introducing a plasmid having a gene encoding the enzyme; 2)通过增加染色体上所述酶的编码基因的拷贝数而增强;2) enhanced by increasing the copy number of the gene encoding said enzyme on the chromosome; 3)通过改变染色体上所述酶的编码基因的启动子序列而增强;3) Enhanced by changing the promoter sequence of the gene encoding the enzyme on the chromosome; 4)通过将强启动子与所述酶的编码基因可操作地连接而增强;4) Enhanced by operably linking a strong promoter to the gene encoding the enzyme; 5)通过对所述酶的氨基酸序列进行改变而增强。5) Enhanced by changing the amino acid sequence of the enzyme. 根据权利要求1至5中任一项所述的微生物,其中,所述微生物为谷氨酸棒状杆菌(Corynebacterium glutamicum)。The microorganism according to any one of claims 1 to 5, wherein the microorganism is Corynebacterium glutamicum. 一种产苏氨酸菌株的构建方法,其中,所述方法包括:A method for constructing a threonine-producing bacterial strain, wherein the method comprises: A.弱化或失活具有氨基酸生产能力的棒状杆菌中的Cgl0978基因,获得基因弱化菌株;和任选地A. Weaken or inactivate the Cgl0978 gene in coryneform bacteria with amino acid production ability to obtain gene weakened strains; and optionally B.增强步骤A基因弱化菌株中与苏氨酸合成途径和/或前体供应途径相关的酶,获得酶活增强菌株;B. Enhancing the enzymes related to the threonine synthesis pathway and/or precursor supply pathway in the gene weakened strain in step A to obtain enzyme activity enhanced strains; 所述增强的途径选自以下1)至5),或任选的组合:The enhanced pathway is selected from the following 1) to 5), or an optional combination: 1)通过导入具有所述酶的编码基因的质粒而增强;1) enhanced by introducing a plasmid having a gene encoding the enzyme; 2)通过增加染色体上所述酶的编码基因的拷贝数而增强;2) enhanced by increasing the copy number of the gene encoding said enzyme on the chromosome; 3)通过改变染色体上所述酶的编码基因的启动子序列而增强;3) Enhanced by changing the promoter sequence of the gene encoding the enzyme on the chromosome; 4)通过将强启动子与所述酶的编码基因可操作地连接而增强;4) Enhanced by operably linking a strong promoter to the gene encoding the enzyme; 5)通过对所述酶的氨基酸序列进行改变而增强;5) enhanced by changing the amino acid sequence of the enzyme; 其中,所述苏氨酸合成途径和/或前体供应途径相关的酶选自天冬氨酸激酶、高丝氨酸脱氢酶、丙酮酸羧化酶、磷酸烯醇式丙酮酸羧化酶中的至少一种。Wherein, the enzymes related to the threonine synthesis pathway and/or precursor supply pathway are selected from aspartokinase, homoserine dehydrogenase, pyruvate carboxylase, phosphoenolpyruvate carboxylase at least one. 根据权利要求7所述的方法,其中,所述棒状杆菌是谷氨酸棒状杆菌(Corynebacterium glutamicum)。The method according to claim 7, wherein the corynebacterium is Corynebacterium glutamicum. 一种生产苏氨酸的方法,其中,所述方法包括如下步骤:A method for producing threonine, wherein the method comprises the steps of: a)培养权利要求1至6中任一项所述的微生物或通过权利要求7或8所述方法构建的菌株,以获得所述微生物的培养物或菌株;A) cultivating the microorganism described in any one of claims 1 to 6 or the bacterial strain constructed by the method described in claim 7 or 8, to obtain the culture or bacterial strain of said microorganism; b)从步骤a)中获得的所述培养物中收集所产生的苏氨酸。b) collecting the threonine produced from said culture obtained in step a).
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