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WO2019222974A1 - A method for knocking out mouse ebln1 gene by using crispr/cas9 system - Google Patents

A method for knocking out mouse ebln1 gene by using crispr/cas9 system Download PDF

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WO2019222974A1
WO2019222974A1 PCT/CN2018/088286 CN2018088286W WO2019222974A1 WO 2019222974 A1 WO2019222974 A1 WO 2019222974A1 CN 2018088286 W CN2018088286 W CN 2018088286W WO 2019222974 A1 WO2019222974 A1 WO 2019222974A1
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ebln1
gene
grna
cas9
crispr
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毛吉炎
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Shenzhen Biocan Technologies Co Ltd
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  • the present invention belongs to the field of animal genetic engineering and genetic modification, and particularly relates to a method for knocking out mouse EBLN1 gene by using CRISPR / Cas9 system.
  • Borna disease virus is a non-segment single-stranded negative-stranded RNA virus first discovered in Germany in 1885. It has strict neuropathy, and its genome encodes six viral proteins. Nucleoprotein (N) is the main infection marker and pathogenic protein. Studies have shown that similar fragments to the Bornavirus N gene (encoding nucleoprotein) are found in a variety of mammalian genomes, including humans, non-human primates, rodents, and elephants, and are named endogenous Endogenous Boma-like N Element (EBLN).
  • EBLN Endogenous Endogenous Boma-like N Element
  • the EBLN1 gene may be a potential susceptible gene that causes depression, which encodes a protein or participates in the pathophysiology of depression, and conducts in-depth systematic research on it, and further clarifies the molecular genetic basis of depression It is of great significance to search for drug treatment targets, but the lack of E BLN1 gene knockout mice in the prior art has caused certain obstacles to the progress of related research.
  • the present invention provides a method for using a CRISPR / Cas9 system to knock out mouse EBLN 1 gene.
  • the technical solution adopted by the present invention is: A method for knocking out mouse EBLN1 gene by using CRISPR / Cas9 system, which is characterized in that it includes a sequence specific to a mouse EBLN1 gene target site The base sequence is shown in FIG. 1; the gRNA oligonucleotide sequence that specifically targets the EBLN1 gene is shown in FIG. 2.
  • An in vitro transcription vector comprising the gRNA.
  • the in vitro transcription vector of gRNA is pMD19T-T7-gRNA
  • the in vitro transcription vector of Cas9 protein is p ST1374-NLS-flag-linker-Cas9.
  • a method for knocking out a mouse EBLN1 gene using the CRISPR / Cas9 system includes the following steps
  • the gRNA and Cas9 mRNA of the above steps are injected into the cytoplasm of mouse fertilized eggs, cultured in vitro and transplanted into the fallopian tubes of adult female mice for generating transgenic mice containing EBLN1 gene mutations.
  • step S3 After gRNA and Cas9 mRNA are mixed in step S3, the final concentration is: Cas9 mRNA 30
  • the mRNA is transfected into the cell at the same time, and the EBLN1 gene is knocked out for studying the function of the EBLN1 gene;
  • gRNA and Cas9 mRNA are injected into a fertilized egg at the same time, and then used to produce transgenic mice that knock out EBLN 1 by embryo transfer;
  • FIG. 1 is a sequence diagram of a mouse EBLN1 gene-specific target site
  • FIG. 2 is a gRNA sequence diagram designed to target the EBLN1 gene.
  • FIG. 1 is a sequence diagram of a mouse EBLN1 gene-specific target site
  • FIG. 2 is a gRNA sequence diagram designed to target the EBLN 1 gene.
  • Invention Examples
  • the sequence of the mouse EBLN1 gene was found in GenBank and the gRNA was designed.
  • the target site sequence is shown in FIG. 1 and the gRNA sequence is shown in FIG. 2.
  • I site was digested, ligated, and inserted into pMD19T-T7-gRNA.
  • the CRISPR / Cas9 system for the EBLN1 gene is:
  • the in vitro transcription vector pST1374-NLS-flaglinker-Cas9 performs in vitro transcription mediated by the T7 promoter.
  • pST1374-NLS-flag-linker-Cas9 was linearized with Age I; then TMD in vitro transcription kit (Biomax) was used to perform pMD19T-T7-gRNA, pST1374-NLS-flag-linker-Cas9 Transcription; Finally, MEGA Clear kit (Ambion) was used to purify gRNA and Cas9 mRNA.
  • Example 3 Application of CRISPR / Cas9 system targeting mouse EBLN1 gene to generate transgenic mice containing EBLN1 gene mutation
  • the embryos at the single-cell stage were collected in a naturally mated donor female mouse by surgery, and the premixed gRNA and Cas9 mRNA (the final concentration after mixing was Cas9 mRNA 30 using a microinjector).
  • ng / ⁇ il gRNA 12 ng / ⁇ il
  • gRNA 12 ng / ⁇ il is injected into the cytoplasm of fertilized eggs.
  • the injected fertilized eggs were transferred to Quinn's Advantage Cleavage Medium, cultured in vitro at 37 ° C for 24 hours, and then transplanted into recipient female mice to generate transgenic mice containing EBLN1 gene mutations.
  • the mRNA is transfected into the cell at the same time, and the EBLN1 gene is knocked out for studying the function of the EBLN1 gene;
  • gRNA and Cas9 mRNA are injected into a fertilized egg at the same time, and then used to produce transgenic mice that knock out EBLN 1 by embryo transfer;
  • gRNA and Cas9 mRNA are transfected into cells at the same time, and positive cells are used as donor cells after screening

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Abstract

Provided is a method for knocking out the mouse EBLN1 gene by using a CRISPR/Cas9 system. The method comprises: firstly, obtaining the DNA sequence for the gRNA recognition region of the mouse EBLN1 gene; then, designing gRNAs that target the DNA sequence and constructing a T7-promoter-containing gRNA in vitro transcription vector for the EBLN1 gene; and finally, using Cas9 and the gRNA in vitro transcription vector to obtain Cas9 mRNA and gRNA, wherein same can be used for producing transgenic mice with EBLN1 gene knockout.

Description

一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因进行敲除 的方法  Method for knocking out mouse EBLN1 gene using CRISPR / Cas9 system

技术领域  Technical field

[0001] 本发明属于动物基因工程和遗传修饰领域, 特别涉及一种应用 CRISPR/Cas9系 统对小鼠 EBLN1基因进行敲除的方法。  [0001] The present invention belongs to the field of animal genetic engineering and genetic modification, and particularly relates to a method for knocking out mouse EBLN1 gene by using CRISPR / Cas9 system.

背景技术  Background technique

[0002] 博尔纳病病毒 (Borna disease virus, BDV) 是 1885年在德国首先发现的一种非 节段单股负链 RNA病毒, 具有严格的嗜神经性, 其基因组编码 6个病毒蛋白, 核 蛋白 (N) 为主要的感染标志物和致病蛋白。 研究表明, 在包括人类、 非人灵长 类、 啮齿类和象类在内的多种哺乳动物基因组中发现与博尔纳病毒 N基因 (编码 核蛋白)相类似的片段, 命名为内源性博尔纳样核蛋白序列 (endogenous Boma-like N Element, EBLN)。  [0002] Borna disease virus (BDV) is a non-segment single-stranded negative-stranded RNA virus first discovered in Germany in 1885. It has strict neuropathy, and its genome encodes six viral proteins. Nucleoprotein (N) is the main infection marker and pathogenic protein. Studies have shown that similar fragments to the Bornavirus N gene (encoding nucleoprotein) are found in a variety of mammalian genomes, including humans, non-human primates, rodents, and elephants, and are named endogenous Endogenous Boma-like N Element (EBLN).

发明概述  Summary of invention

技术问题  technical problem

[0003] 根据研究, EBLN1基因可能是导致抑郁症的一个潜在易感基因, 其编码蛋白 或参与抑郁症的病理生理过程, 对其进行深入系统的研究, 对于进一步明确抑 郁症的分子遗传学基础和寻找药物治疗靶标有着重要意义, 但现有技术中缺乏 E BLN1基因被敲除的小鼠, 对相关研究的进展造成了一定的阻碍。  [0003] According to research, the EBLN1 gene may be a potential susceptible gene that causes depression, which encodes a protein or participates in the pathophysiology of depression, and conducts in-depth systematic research on it, and further clarifies the molecular genetic basis of depression It is of great significance to search for drug treatment targets, but the lack of E BLN1 gene knockout mice in the prior art has caused certain obstacles to the progress of related research.

问题的解决方案  Problem solution

技术解决方案  Technical solutions

[0004] 本发明提供了一种应用 CRISPR/Cas9系统对小鼠 EBLN 1基因进行敲除的方法。  [0004] The present invention provides a method for using a CRISPR / Cas9 system to knock out mouse EBLN 1 gene.

[0005] 为实现上述目的, 本发明采取的技术方案为: 一种应用 CRISPR/Cas9系统对小 鼠 EBLN1基因进行敲除的方法, 其特征在于: 包括针对小鼠 EBLN1基因特异性 靶位点序列, 其碱基序列如图 1所示; 包括特异性靶向 EBLN1基因的 gRNA寡核 苷酸序列, 其碱基序列如图 2所示。 [0006] 包括所述的 gRNA的体外转录载体。 [0005] In order to achieve the above object, the technical solution adopted by the present invention is: A method for knocking out mouse EBLN1 gene by using CRISPR / Cas9 system, which is characterized in that it includes a sequence specific to a mouse EBLN1 gene target site The base sequence is shown in FIG. 1; the gRNA oligonucleotide sequence that specifically targets the EBLN1 gene is shown in FIG. 2. [0006] An in vitro transcription vector comprising the gRNA.

[0007] 所述 gRNA的体外转录载体为 pMD19T-T7-gRNA, Cas9蛋白的体外转录载体为 p ST1374-NLS-flag-linker-Cas9。  [0007] The in vitro transcription vector of gRNA is pMD19T-T7-gRNA, and the in vitro transcription vector of Cas9 protein is p ST1374-NLS-flag-linker-Cas9.

[0008] 一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因进行敲除的方法, 包括以下步骤  [0008] A method for knocking out a mouse EBLN1 gene using the CRISPR / Cas9 system includes the following steps

[0009] S1.构建特异性靶向 EBLN1基因的 gRNA的体外转录载体; 通过体外转录得到 靶向 EBLN 1基因的 gRNA ; [0009] S1. Construct an in vitro transcription vector that specifically targets the gRNA of the EBLN1 gene; obtain gRNA that targets the EBLN 1 gene by in vitro transcription;

[0010] S2.体外转录 Cas9蛋白的体外转录载体, 得到 Cas9 mRNA;  [0010] S2. In vitro transcription vector of Cas9 protein in vitro, to obtain Cas9 mRNA;

[0011] S3.将以上步骤的 gRNA及 Cas9 mRNA, 注射入小鼠受精卵细胞质中, 经体外 培养后移植入成年雌性小鼠输卵管中, 用于产生含 EBLN1基因突变的转基因小 鼠。  [0011] S3. The gRNA and Cas9 mRNA of the above steps are injected into the cytoplasm of mouse fertilized eggs, cultured in vitro and transplanted into the fallopian tubes of adult female mice for generating transgenic mice containing EBLN1 gene mutations.

[0012] 在步骤 S3中 gRNA及 Cas9 mRNA混合后, 终浓度为: Cas9 mRNA 30  [0012] After gRNA and Cas9 mRNA are mixed in step S3, the final concentration is: Cas9 mRNA 30

ng/[il , gRNA 12 ng/jxl。 ng / [i l, gRNA 12 ng / j xl.

发明的有益效果  The beneficial effects of the invention

有益效果  Beneficial effect

[0013] ( 1) gRNA与 Cas9  (1) gRNA and Cas9

mRNA同时转染至细胞, 敲除 EBLN1基因, 用于研究 EBLN1基因的功能;  The mRNA is transfected into the cell at the same time, and the EBLN1 gene is knocked out for studying the function of the EBLN1 gene;

[0014] (2) 将 gRNA与 Cas9 mRNA同时注射入受精卵, 然后通过胚胎移植用于生产 敲除 EBLN 1的转基因小鼠;  [0014] (2) gRNA and Cas9 mRNA are injected into a fertilized egg at the same time, and then used to produce transgenic mice that knock out EBLN 1 by embryo transfer;

[0015] (3) 将 gRNA与 Cas9 mRNA同时转染至细胞, 筛选后用阳性细胞作为供核细胞 [0015] (3) gRNA and Cas9 mRNA are transfected into cells at the same time, and positive cells are used as donor cells after screening

, 通过核移植的方法产生含 EBLN1基因突变的转基因小鼠。 Transgenic mice containing EBLN1 gene mutations were generated by nuclear transfer.

对附图的简要说明  Brief description of the drawings

附图说明  BRIEF DESCRIPTION OF THE DRAWINGS

[0016] 图 1为小鼠 EBLN1基因特异性靶位点序列图;  [0016] FIG. 1 is a sequence diagram of a mouse EBLN1 gene-specific target site;

[0017] 图 2为靶向 EBLN1基因设计的 gRNA序列图。  [0017] FIG. 2 is a gRNA sequence diagram designed to target the EBLN1 gene.

附图说明  BRIEF DESCRIPTION OF THE DRAWINGS

[0018] 图 1为小鼠 EBLN1基因特异性靶位点序列图;  [0018] FIG. 1 is a sequence diagram of a mouse EBLN1 gene-specific target site;

[0019] 图 2为靶向 EBLN 1基因设计的 gRNA序列图。 发明实施例 [0019] FIG. 2 is a gRNA sequence diagram designed to target the EBLN 1 gene. Invention Examples

本发明的实施方式  Embodiments of the invention

[0020] 下面结合实施例及附图对本发明作进一步详细的描述, 但本发明的实施方式不 限于此。  [0020] The present invention is described in further detail below with reference to the embodiments and the accompanying drawings, but the embodiments of the present invention are not limited thereto.

[0021] 实施例一: 靶向 EBLN1基因的 CRISPR/Cas9系统的构建  Example 1: Construction of CRISPR / Cas9 System Targeting EBLN1 Gene

[0022] 在 GenBank中找到小鼠 EBLN1基因的序列并设计 gRNA, 其靶位点序列如图 1所 示, gRNA序列如图 2所示。  [0022] The sequence of the mouse EBLN1 gene was found in GenBank and the gRNA was designed. The target site sequence is shown in FIG. 1 and the gRNA sequence is shown in FIG. 2.

[0023] 含有特定 gRNA序列的 pMD19T-T7-gRNA载体的构建:  [0023] Construction of a pMD19T-T7-gRNA vector containing a specific gRNA sequence:

[0024] ( 1) 设计并合成识别 EBLN1基因的 gRNA;  [0024] (1) designing and synthesizing gRNA that recognizes the EBLN1 gene;

[0025] (2) 合成后的 gRNA寡核苷酸进行体外退火;  [0025] (2) annealing the synthesized gRNA oligonucleotide in vitro;

[0026] (3) 将 gRNA通过 Kpn I和 Sph  (3) pass gRNA through Kpn I and Sph

I位点进行酶切、 连接, 插入到 pMD19T-T7-gRNA中。  I site was digested, ligated, and inserted into pMD19T-T7-gRNA.

[0027] 针对 EBLN1基因的 CRISPR/Cas9系统即为:  [0027] The CRISPR / Cas9 system for the EBLN1 gene is:

体外转录载体 pMD19T-T7-gRNA和 pST1374-NLS-flag-linker-Cas9。  In vitro transcription vectors pMD19T-T7-gRNA and pST1374-NLS-flag-linker-Cas9.

[0028] 实施例二: 体外转录  [0028] Example 2: In vitro transcription

[0029] 利用构建好的载体 pMD 19T-T7-gRNA和 Cas9  [0029] Using the constructed vector pMD 19T-T7-gRNA and Cas9

mRNA的体外转录载体 pST1374-NLS-flaglinker-Cas9进行以 T7启动子介导的体外 转录。 首先将 pMD19T-T7-gRNA用 EcoR  The in vitro transcription vector pST1374-NLS-flaglinker-Cas9 performs in vitro transcription mediated by the T7 promoter. First use pMD19T-T7-gRNA with EcoR

V线性化, pST1374-NLS-flag-linker-Cas9用 Age I线性化; 然后用 T7体外转录试剂 盒 (百奥迈科) 进行 pMD19T-T7-gRNA、 pST1374-NLS-flag-linker-Cas9的体外转 录; 最后用 MEGA Clear kit (Ambion) 进行 gRNA、 Cas9 mRNA的纯化。  V linearization, pST1374-NLS-flag-linker-Cas9 was linearized with Age I; then TMD in vitro transcription kit (Biomax) was used to perform pMD19T-T7-gRNA, pST1374-NLS-flag-linker-Cas9 Transcription; Finally, MEGA Clear kit (Ambion) was used to purify gRNA and Cas9 mRNA.

[0030] 实施例三: 应用靶向小鼠 EBLN1基因的 CRISPR/Cas9系统产生含 EBLN1基因 突变的转基因小鼠  Example 3: Application of CRISPR / Cas9 system targeting mouse EBLN1 gene to generate transgenic mice containing EBLN1 gene mutation

[0031] 通过手术在自然交配的供体雌鼠体内收集处于单细胞阶段的胚胎, 利用显微注 射仪将预混好的 gRNA和 Cas9 mRNA (混合后终浓度为 Cas9 mRNA 30  [0031] The embryos at the single-cell stage were collected in a naturally mated donor female mouse by surgery, and the premixed gRNA and Cas9 mRNA (the final concentration after mixing was Cas9 mRNA 30 using a microinjector).

ng/^il, gRNA 12 ng/^il) 注入受精卵的细胞质中。 注射后的受精卵转移至 Quinn’ s Advantage Cleavage Medium中, 37°C体外培养 24 h, 然后移植至受体雌鼠体内, 用于产生含 EBLN1基因突变的转基因小鼠。 工业实用性 ng / ^ il, gRNA 12 ng / ^ il) is injected into the cytoplasm of fertilized eggs. The injected fertilized eggs were transferred to Quinn's Advantage Cleavage Medium, cultured in vitro at 37 ° C for 24 hours, and then transplanted into recipient female mice to generate transgenic mice containing EBLN1 gene mutations. Industrial applicability

[0032] ( 1) gRNA与 Cas9  (1) gRNA and Cas9

mRNA同时转染至细胞, 敲除 EBLN1基因, 用于研究 EBLN1基因的功能;  The mRNA is transfected into the cell at the same time, and the EBLN1 gene is knocked out for studying the function of the EBLN1 gene;

[0033] (2) 将 gRNA与 Cas9 mRNA同时注射入受精卵, 然后通过胚胎移植用于生产 敲除 EBLN 1的转基因小鼠;  (2) gRNA and Cas9 mRNA are injected into a fertilized egg at the same time, and then used to produce transgenic mice that knock out EBLN 1 by embryo transfer;

[0034] (3) 将 gRNA与 Cas9 mRNA同时转染至细胞, 筛选后用阳性细胞作为供核细胞 (3) gRNA and Cas9 mRNA are transfected into cells at the same time, and positive cells are used as donor cells after screening

, 通过核移植的方法产生含 EBLN1基因突变的转基因小鼠。 Transgenic mice containing EBLN1 gene mutations were generated by nuclear transfer.

Claims

权利要求书 Claim [权利要求 1] 一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因进行敲除的方法, 其特 征在于: 包括针对小鼠 EBLN1基因特异性靶位点序列, 其碱基序列 如图 1所示; 包括特异性靶向 EBLN1基因的 gRNA寡核苷酸序列, 其 碱基序列如图 2所示。  [Claim 1] A method for knocking out mouse EBLN1 gene by using CRISPR / Cas9 system, characterized in that: it comprises a mouse EBLN1 gene specific target site sequence, and its base sequence is shown in Figure 1; A gRNA oligonucleotide sequence that specifically targets the EBLN1 gene is shown in FIG. 2. [权利要求 2] 根据权利要求 1所述的一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因 进行敲除的方法, 其特征在于: 包括所述的 gRNA的体外转录载体。  [Claim 2] A method for knocking out a mouse EBLN1 gene using the CRISPR / Cas9 system according to claim 1, comprising: an in vitro transcription vector comprising the gRNA. [权利要求 3] 根据权利要求 1所述的一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因 进行敲除的方法, 其特征在于: 所述 gRNA的体外转录载体为 pMD19 T-T7-gRNA, Cas9蛋白的体外转录载体为 pST1374-NLS-flag-linker-Ca s9。 [Claim 3] The method for knocking out mouse EBLN1 gene using the CRISPR / Cas9 system according to claim 1, characterized in that: the in vitro transcription vector of the gRNA is pMD19 T-T7-gRNA, Cas9 The in vitro transcription vector of the protein is pST1374-NLS-flag-linker-Ca s9. [权利要求 4] 根据权利要求 1所述的一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因 进行敲除的方法, 其特征在于: 包括以下步骤:  [Claim 4] The method for knocking out the mouse EBLN1 gene by using the CRISPR / Cas9 system according to claim 1, comprising the following steps: 51.构建特异性靶向 EBLN1基因的 gRNA的体外转录载体; 通过体外转 录得到靶向 EBLN1的 gRNA ;  51. Construct an in vitro transcription vector that specifically targets gRNA of the EBLN1 gene; obtain gRNA that targets EBLN1 by in vitro transcription; 52.体外转录 Cas9蛋白的体外转录载体, 得到 Cas9 mRNA;  52. An in vitro transcription vector for Cas9 protein in vitro, to obtain Cas9 mRNA; 53.将以上步骤的 gRNA及 Cas9 mRNA, 注射入小鼠受精卵细胞质中, 经体外培养后移植入成年雌性小鼠输卵管中, 用于产生含 EBLN1基 因突变的转基因小鼠。  53. Inject the gRNA and Cas9 mRNA from the above steps into the cytoplasm of fertilized oocytes of mice, culture them in vitro and transplant them into the fallopian tubes of adult female mice to generate transgenic mice containing EBLN1 gene mutations. [权利要求 5] 如权利要求 4所述的一种应用 CRISPR/Cas9系统对小鼠 EBLN1基因进 行敲除的方法, 其特征在于: 在步骤 S3中 gRNA及 Cas9 mRNA混合后 , 终浓度为: Cas9 mRNA 30 ng/[il , gRNA 12 ng/[il。  [Claim 5] The method for knocking out mouse EBLN1 gene by using the CRISPR / Cas9 system according to claim 4, characterized in that: after the gRNA and Cas9 mRNA are mixed in step S3, the final concentration is: Cas9 mRNA 30 ng / [il, gRNA 12 ng / [il.
PCT/CN2018/088286 2018-05-24 2018-05-24 A method for knocking out mouse ebln1 gene by using crispr/cas9 system Ceased WO2019222974A1 (en)

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