WO2019062895A1 - Use of maize gene zmabcg20 in regulating crop male fertility and dna molecular markers associated with maize male fertility and use thereof - Google Patents
Use of maize gene zmabcg20 in regulating crop male fertility and dna molecular markers associated with maize male fertility and use thereof Download PDFInfo
- Publication number
- WO2019062895A1 WO2019062895A1 PCT/CN2018/108583 CN2018108583W WO2019062895A1 WO 2019062895 A1 WO2019062895 A1 WO 2019062895A1 CN 2018108583 W CN2018108583 W CN 2018108583W WO 2019062895 A1 WO2019062895 A1 WO 2019062895A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- gene
- zmabcg20
- maize
- nucleotide sequence
- sequence
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
Images
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/415—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from plants
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N5/00—Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
- C12N5/10—Cells modified by introduction of foreign genetic material
Definitions
- the invention belongs to the field of genetic engineering and molecular breeding, and in particular relates to the application of the maize gene ZmABCG20 in regulating male fertility of crops and the DNA molecular markers associated with male fertility of corn and applications thereof.
- Plant male sterility mutations are a very common phenomenon in nature, and male sterility mutants have been found in at least 617 species of 43 families and 162 genera. In genetics, male sterility is divided into three categories: nuclear male sterility, cytoplasmic male sterility and nuclear cytoplasmic interaction. 1) Nuclear male sterility is caused by nuclear gene mutation, with dominant and recessive mutations. , sporozoite gene mutations and gametophytic gene mutations. Dominant mutations and gametophytic gene mutations can only be inherited by female gametes, which can be inherited either by female gametes or by male gametes, and follow Mendel's law.
- Some sporozoite recessive nuclear sterility genes have been cloned, such as ms2 of Arabidopsis thaliana, ms45 of maize and mil1 of rice (Aarts et al., 1997, The Arabidopsis MALE STERILITY 2 protein shares similarity with reductases in elongation/condensation complexes, Plant Journal, 12: 615-623; Albertsen, 2006, Male tissue-preferred regulatory sequences of MS45gene and method of using same, Patent No.: US7154024B2; Hong et al, 2012, Somatic and reproductive cell development in rice anther is regulated by a putative Glutaredoxin, Plant Cell, 24:577-588); some gametophytic recessive genic male sterility genes have also been cloned, such as the two microspores of Arabidopsis thaliana mitotic abnormalities sidecar pollen and gemini pollen (Oh et al, 2010, The S
- Sterile cytoplasm is caused by mutant mitochondrial genes, but has a corresponding nuclear restorer gene that inhibits sterile cytoplasmic genes. Sterile cytoplasmic genes produce a new protein that affects normal mitochondrial function (Chen and Liu, 2014, Male sterility and fertility restoration in crops, Annu Rev Plant Biol, 65:5.1-5.28).
- the cytoplasmic male sterile lines used in maize have some defects: firstly, because the cytoplasmic male sterile line needs specific recovery genes to restore fertility, the utilization rate of germplasm resources is very low, which limits the breeding efficiency of excellent varieties. Secondly, the sterile line of the sterile line is unstable, and the fertility can be restored under certain conditions, which affects the purity of the hybrid; finally, due to the single cytoplasmic genotype, the corn leaf disease is outbreak, which directly leads to the cytoplasmic male sterility technology. qiut the market. Ordinary nuclear infertility can avoid these problems. For example, it can be used in corn, which not only saves the labor cost required for artificial emasculation, but also increases seed production.
- the plant ABC protein family is a type of membrane transporter that localizes to the cell membrane and is responsible for the transmembrane transport of metabolites; the ABCG transporter is one of the largest subfamilies.
- ABCG proteins can be divided into two main types according to their structural features: full-size proteins contain two nucleotide binding domains and two transmembrane regions, which can form a complete transmembrane transport structure on their own, complete substrate transport; half-size proteins Only one nucleotide binding domain and one transmembrane domain need to bind to another half-size protein molecule to form a complete transport unit (Verrier et al., 2008, Plant ABC proteins–a unified nomenclature and updated inventory.
- the AtABCG26 gene of Arabidopsis thaliana and the ortholog gene OsABCG15 in rice encode a transmembrane transporter of pollen wall component sporopollen precursor, expressed in the anther velvet layer, and the sporopollen precursor from the velvety cell Transfer to the anther chamber to synthesize sporopollenin on the pollen cell wall.
- the mutant atabcg26 showed extremely low pollen count and male fertility; the rice osabcg15 mutant was completely male sterile and had no pollen; in addition, the rice OsABCG26 mutation also showed male complete sterility, and the phenotype was similar to osabcg15 (Zhao et al. , 2016, ATP binding cassette G transporters and plant male reproduction. Plant Signal and Behavior, 11(3): e1136764.doi: 10.1080/15592324.2015.1136764).
- genomic bioinformatics analysis Pang et al. (Pang et al., 2013, Inventory and general analysis of the ATP-binding cassette (ABC) gene superfamily in maize (Zea May L.). Gene, 2013, 526(2): 411- 428) 54 ABCG genes were identified from maize varieties, but no genes related to male fertility were found.
- the object of the present invention is to provide a use of the maize gene ZmABCG20 for regulating crop male fertility.
- Another object of the present invention is to provide a mutant zmabcg20-1 of the maize gene ZmABCG20 and uses thereof.
- the present invention provides the use of the maize gene ZmABCG20 for regulating crop male fertility, wherein the cDNA sequence of the gene ZmABCG20 is:
- nucleotide sequence in which the nucleotide sequence shown by SEQ ID NO: 2 is substituted, deleted and/or increased by one or more nucleotides and expresses the same functional protein;
- nucleotide sequence which hybridizes under stringent conditions to the sequence of SEQ ID NO: 2 and which expresses the same functional protein, which is 0.1 x SSPE containing 0.1% SDS or 0.1 x SSC containing 0.1% SDS. In solution, hybridize at 65 ° C and wash the membrane with the solution; or
- Iv a nucleotide sequence having more than 85% homology to the nucleotide sequence of i), ii) or iii) and expressing the same functional protein.
- the regulation refers to making the crop malely fertile.
- the applications include:
- the invention firstly performs cobalt 60 radiation mutagenesis treatment on the corn variety Jingkejing 2000 seeds (M 0 generation), the planted seeds are obtained from the M 1 generation plants; the M 1 generation plants are selfed to produce seeds (for the M 2 generation), planting M 2 generation plants were subjected to morphological, histological and genetic identification of M 2 generation plants, and sterile plants were screened; then the sterile plants were subjected to gene sequencing and DNA sequence analysis, and verified at the molecular level. Finally, homozygous sterile plants were obtained and used for cross breeding and biotechnology research.
- the maize ZmABCG20 gene (pollen development control gene) provided by the present invention exhibits complete male sterility after mutation. Its nucleotide sequence is shown as SEQ ID NO: 1 or SEQ ID NO: 4; the DNA sequence of its coding region is shown as SEQ ID NO: 2 or SEQ ID NO: 5; the encoded protein sequence is SEQ ID NO: : 3 or SEQ ID NO: 6.
- the invention provides the use of the maize gene ZmABCG20 in the preparation of a transgenic plant.
- a recombinant expression vector carrying the gene ZmABCG20 cDNA or genomic sequence is transferred into wild type maize callus, and the transformed material is subjected to co-culture-screening-differentiation-rooting-transgenic seedling training and transplanting, and the transgenic plant is screened. Then, the transgenic corn is crossed with the male sterile maize to restore the fertility of the male sterile maize.
- the invention provides the use of the maize gene ZmABCG20 for restoring fertility in a male sterile plant, wherein the male sterility trait is caused by the genetic mutant.
- the present invention provides a method for preparing a male sterility transgenic maize by inhibiting the activity of a maize ZmABCG20 gene, which utilizes gene silencing, gene suppression, gene knockout or directed gene mutation to transcribe the ZmABCG20 gene in maize.
- the level of protein activity after translation or translation is reduced, and male genic sterile GM maize is obtained.
- an RNAi sequence carrying a cDNA sequence against the gene ZmABCG20 can be operably linked to a constitutive promoter or a floral organ-specific expression promoter, and transferred into a plant callus, and the transformed material is subjected to co-culture-screening-differentiation. - Rooting-transgenic seedlings were exercised and transplanted, and male sterility GM maize was screened.
- the target DNA sequence for RNAi action is set forth in SEQ ID NO:23.
- the present invention provides the use of the biological material obtained by the above method in crop improved breeding and seed production.
- the present invention provides the use of the maize gene ZmABCG20 in crop improved breeding and seed production.
- a plant containing or expressing the ZmABCG20 gene, or a plant inactivated according to the above method or the ZmABCG20 gene is hybridized with the same crop having excellent agronomic traits.
- the crop is a self-pollinating or cross-pollinated crop, including but not limited to corn, wheat or rice, etc., preferably corn.
- the excellent agronomic traits include, but are not limited to, increased yield, improved quality, resistance to pests and diseases, stress resistance, lodging resistance, and the like.
- the present invention provides an inhibitor for inhibiting the activity of a ZmABCG20 gene selected from at least one of shRNA, siRNA, dsRNA, miRNA, cDNA, antisense RNA/DNA, low molecular weight compound, peptide, antibody, and the like.
- a ZmABCG20 gene selected from at least one of shRNA, siRNA, dsRNA, miRNA, cDNA, antisense RNA/DNA, low molecular weight compound, peptide, antibody, and the like.
- the invention provides an expression cassette, expression vector or cloning vector comprising an inhibitor encoding the nucleic acid molecule described above.
- the present invention provides a mutant zmabcg20-1 gene of the maize gene ZmABCG20, the nucleic acid sequence of which is:
- Iii) a nucleotide sequence in which the sequence shown in i) or ii) is substituted, deleted and/or added to one or more nucleotides and expresses the same functional protein, and comprises 4 bases at an equivalent position to the gene ZmABCG20 TGCA is missing;
- Iv) a nucleotide sequence which hybridizes under stringent conditions to the sequence shown in i) or ii) and which expresses the same functional protein, and which comprises a 4-base TGCA deletion at the equivalent position to the gene ZmABCG20; Hybridization at 65 ° C in 0.1 ⁇ SSPE containing 0.1% SDS or 0.1 ⁇ SSC solution containing 0.1% SDS, and washing the membrane with the solution; or
- v) A nucleotide sequence having more than 85% homology to the nucleotide sequence of i) or ii) and expressing the same functional protein, and comprising a 4 base TGCA deletion at an equivalent position to the gene ZmABCG20.
- the coding region DNA sequence of the maize gene zmabcg20-1 is shown in SEQ ID NO: 8.
- the present invention provides the use of the gene zmabcg20-1 for regulating corn fertility, the application comprising:
- the crop is expressed by a protein encoded by the zmabcg20-1 gene.
- maize containing or expressing the mutant zmabcg20-1 gene exhibits recessive male sterility.
- the present invention provides the use of the gene zmabcg20-1 in improved breeding and seed production of maize.
- corn comprising or expressing the mutant zmabcg20-1 gene is crossed with corn having excellent agronomic traits.
- the invention provides an expression cassette, expression vector or cloning vector comprising a nucleic acid sequence comprising the gene zmabcg20-1.
- the present invention provides an engineered bacteria, a host cell, or a transgenic cell line comprising the gene zmabcg20-1, or the expression cassette, expression vector or cloning vector.
- the invention provides the use of a biomaterial comprising or expressing the gene zmabcg20-1 for the preparation of transgenic corn.
- the present invention provides a plant panicle-specific promoter of the male flower or the male and female, the promoter being:
- nucleotide sequence in which the nucleotide sequence shown by SEQ ID NO: 12 is substituted, deleted and/or increased by one or more nucleotides and has the same function;
- nucleotide sequence which hybridizes under stringent conditions to the sequence of SEQ ID NO: 12 and which has the same function, in stringent conditions of 0.1 x SSPE containing 0.1% SDS or 0.1 x SSC solution containing 0.1% SDS Medium, hybridizing at 65 ° C, and washing the membrane with the solution; or
- Iv a nucleotide sequence having more than 85% homology to the nucleotide sequence of i), ii) or iii) and having the same function.
- the invention provides an expression cassette, expression vector or cloning vector comprising a nucleic acid comprising the sequence set forth in SEQ ID NO: 12.
- the invention provides an engineered bacterial, transgenic cell line comprising the specific promoter, or the expression cassette or vector.
- the invention provides the use of the specific promoter for regulating downstream gene expression.
- the invention provides the use of the specific promoter in the preparation of a transgenic plant.
- a promoter sequence is operably linked to a gene of interest, and the resulting construct is used to transform a target plant, and the promoter drives the gene of interest to be specifically expressed in the young ears of the male flower or the male and female.
- the present invention provides a DNA molecular marker associated with male fertility in maize, the DNA molecule marker being located at bases 326-329 after the start codon of the maize gene ZmABCG20 nucleic acid sequence, the sequence being TGCA, The 4 base deleted maize line showed recessive male sterility.
- the invention provides a primer for specifically amplifying a marker of the DNA molecule, comprising:
- Upstream primer 3326_F1 5'-CCAGACGAGGGCAGACCAG-3' (SEQ ID NO: 10)
- Downstream primer 3326_R1 5'-GATCTCGCCAGGGTCCACA-3' SEQ ID NO: 11)
- the invention provides a detection reagent or kit comprising the primers 3326_F1 and 3326_R1.
- the present invention provides the use of the DNA molecule marker, the primer or the detection reagent or kit in maize molecular marker-assisted breeding.
- the present invention provides the use of the DNA molecular marker, the primer or the detection reagent or kit for identifying or breeding a male sterile maize germplasm resource.
- the specific method is as follows:
- the genomic DNA of the tested corn is extracted, and the PCR amplification reaction is carried out by using primers 3326_F1 and 3326_R1, and the amplified product is detected by electrophoresis. If a characteristic band of 79 bp is present in the amplified product, the fertility of the corn to be tested is normal, corresponding The genotype of ZmABCG20 is wild type; if a characteristic band of 75 bp is present in the amplified product, the maize to be tested is male sterile, and the corresponding ZmABCG20 genotype is zmabcg20-1 mutant; if the amplification product is 79 bp and The two-band type of 75 bp, the corn to be tested is a heterozygous genotype.
- the present invention provides the use of the DNA molecule marker, the primer or the detection reagent or kit in the classification of the maize gene ZmABCG20.
- ZmABCG20 mutation only affects male fertility, which can cause male complete sterility, but has no effect on male and female fertility and other agronomic traits, and is suitable for industrial application such as cross breeding, seed production and production.
- ZmABCG20 is only expressed in the shoots of male flowers, and has strong time and tissue specificity. Its promoter can be used to drive specific expression of any gene in the young flower spikes.
- zmabcg20-1 is the first reported ZmABCG20 mutant, which is of great significance for the utilization and function of this gene.
- the mutant is a gene deletion mutation caused by a 4 base deletion, and there is no potential risk of fertility recovery, and there is no risk of genetic instability.
- the mutant is a 4-base deletion in the gene and does not affect the function of adjacent genes on both sides of ZmABCG20.
- the mutant is a 4 base deletion mutation, and the Indel label can be designed to perform high-throughput detection by ordinary PCR and electrophoresis; and can also be designed as a gene chip detection marker.
- the genetic background of the mutant is a contemporary Chinese main variety, which can be directly used for the selection of Chinese corn varieties without a long process of improvement.
- FIG. 1 is a view showing the mutant wild type and the male flower of zmabcg20-1 and the ear of zmabcg20-1 in Example 2 of the present invention.
- Figure 2 is a graph showing the results of anther and pollen I 2 -KI staining of wild type and mutant zmabcg20-1 in Example 3 of the present invention.
- Example 3 is a real-time quantitative PCR result of ZmABCG20 gene expression in young ears and different tissues of Jingkejing 2000 in Example 7 of the present invention.
- Figure 4 is a schematic diagram showing the ZmABCG20 gene structure and the mutation site of zmabcg20-1 identified in Examples 6 and 8 of the present invention.
- Example 9 is an electrophoresis result of molecular marker identification of a mutant of a self-crossing F 2 progeny and a wild type plant ZmABCG20 gene after open pollination of the zmabcg20-1 mutant in Example 9 of the present invention.
- Figure 6 is a schematic flow chart showing the construction of the RNAi vector of the ZmABCG20 gene in Example 10 of the present invention.
- Figure 7 is a result of pollen iodine staining of control and RNAi male sterile plants in Example 11 of the present invention.
- Figure 8 is a technical route diagram for the hybridization of the zmabcg20-1 sterile gene described in Example 13 of the present invention.
- the anthers were observed in the field, and anthers with abnormal color, small shape and small amount of pollen were selected for further microscopic examination under the microscope.
- the family numbered 3326 9 plants with abnormal fertility were found, which could not be loosely powdered, but were firm and normal (Fig. 1).
- the mutant anther was smaller than the wild type, the color was light yellow, and there was no visible pollen.
- the mutant was named zmabcg20-1.
- the mutant was normally robust under open pollination (Fig. 1), indicating that the mutant was a male sterile mutant and the fertility of the ear was not affected.
- the zmabcg20-1 open pollination seed (F 1 ) was harvested and sown. After the heading, the powder could be normally scattered.
- the bagging self-crossing could be normal and the F 2 seeds were harvested from the single ear.
- a single-eared F 2 seed ear was sown, and the fertility was identified after heading.
- CTAB method was used to extract corn leaf DNA.
- the specific method was as follows: weigh about 0.1g of leaves, put into a centrifuge tube, add 600 ⁇ L CTAB extraction buffer, 5 ⁇ L RNase A, shake and disperse, and circulate at 65°C for 0.5hr.
- the genetic map IBM2 2008 (www.maizegdb.org) and screened Indel SSR markers on each chromosome maize uniform distribution, selected polymorphic marker is present between the 2000 Beijing Branch waxy parent of Beijing Branch Waxy and M 2 in 2000
- the PCR procedure consists of 1 ⁇ L of 10 ⁇ reaction buffer, 0.25 ⁇ L of dNTP, 0.25 ⁇ L of forward primer and 0.25 ⁇ L of reverse primer, 0.5 U of Taq enzyme, 1 ⁇ L of 10 ng/ ⁇ L of template DNA, and total volume of ultrapure water. Make up to 10 ⁇ L.
- the PCR reaction procedure was: denaturation at 94-98 ° C for 1-3 min, and then the following cycles were performed: denaturation at 95 ° C for 20 s, renaturation at 53-58 ° C for 20 s, extension at 72 ° C for 30 s, 30-40 cycles.
- the reaction product was electrophoretically separated on a 6% polyacrylamide gel.
- the polyacrylamide gel electrophoresis method is as follows: (1) Preparation of polyacrylamide gel: 6% PA gel 80 mL, 10% ammonium persulfate 250 ⁇ L (winter) / 125 ⁇ L (summer), tetramethylethylenediamine (TEMED) 80 ⁇ L . Shake well and mix. Wipe the glass plate repeatedly with detergent, wipe it with alcohol, and dry it.
- Electrophoresis Add 5 ⁇ l of 5 ⁇ Loading Buffer to the amplification product and mix at 95 °C for 5 minutes.
- the Indel marker IDP8150 located on chromosome 9 (forward primer: 5'-TGCTCGCAGGAATAGAAAGC-3'; reverse primer: 5'-GACGCAATCGACAGAGTACG-3'), the amplification band in Jingkejing 2000 is heterozygous
- the conjugated type, and 9 strains of zmabcg20-1 are all homozygous, indicating that the mutated gene controlling fertility is linked to IDP8150 and is located on chromosome 9.
- the primers were designed according to the Ms45 and ZmABCG20 gene sequences of maize inbred line B73, and the genomic DNA of wild type Jingke ⁇ 2000 and zmabcg20-1 were amplified. The amplified products were sequenced and spliced out the complete sequence.
- the primer pair for amplifying maize ZmABCG20 is ZmABCG20_1 ⁇ 3
- the primer pair for amplifying Ms45 is Ms45_1 ⁇ Ms45_4; the sequence is shown in Table 1:
- the PCR reaction system consisted of 1 ⁇ L of 10 ⁇ reaction buffer, 0.25 ⁇ L of dNTP, 0.25 ⁇ L of forward primer and 0.25 ⁇ L of reverse primer, 0.5 U of Taq enzyme, and 1 ⁇ L of 10 ng/ ⁇ L of template DNA, and the total volume was supplemented to 10 ⁇ L with ultrapure water. .
- the PCR reaction procedure was: denaturation at 94-98 ° C for 1-3 min, and then the following cycles were performed: denaturation at 95 ° C for 20 s, renaturation at 53-58 ° C for 20 s, extension at 72 ° C for 30 s, 30-40 cycles. After the end of the cycle, the extension was extended at 72 ° C for 3-10 min to terminate the reaction.
- a 1.5% agarose gel was placed and electrophoresed under an electric field of 5 V/cm for 30 min; the PCR product was recovered using a commercially available DNA gel recovery kit.
- the PCR product DNA of the wild type and mutant obtained was sequenced using an ABI3730 sequencer, and the sequencing primers used a forward primer and a reverse primer, respectively.
- the bidirectional sequencing results were spliced using the common DNA sequence analysis software DNAman6.0.
- the analysis showed that the Ms45 gene sequence of the mutant zmabcg20-1 was identical to the wild type Jingke ⁇ 2000, and no mutation occurred.
- the full-length nucleotide sequence of the ZmABCG20 gene of the mutant zmabcg20-1 is shown in SEQ ID NO: 7, and is deleted by 4 bases from the genus ⁇ 2000.
- ZmABCG20 is an orthologous gene with OsABCG15 in rice and AtABCG26 in Arabidopsis, while the latter two mutant phenotypes also show male sterility, and the rice mutant osabcg15 also has no mature pollen.
- the flower spikes of Jingkejing 2000 from different periods were selected, from V7 (forming of corn tassels) to V18 (maize of tassel ears) (How a Corn Plant Develops. Special Report No. 48. Iowa State University of Science and Technology, Cooperative Extension Servce, Ames, Iowa. Reprinted 2/1996), and roots, stems, leaves, male flowers, gems, and ears; liquid nitrogen transport, storage at -80 ° C; extraction reagent with TRIzol RNA
- the above tissue RNA was extracted from the cassette (Invitrogen, USA), and the RNA was reverse-transcribed into cDNA using the PrimeScript RT reagent kit (TaKaRa, Dalian) according to the instructions.
- Thermo Fisher USA Quantitative PCR using PowerUp TM SYBR TM Green Master Mix ( Thermo Fisher USA), amplification and detection of the fluorescence PikoReal 96 quantitative PCR instrument (Thermo Fisher, USA).
- the maize Actin1 gene was selected as the internal reference gene, the amplification primers were actinI-F and actinI-R (SEQ ID NO: 15-16), and the amplification primers for ZmABCG20 fluorescence quantification were ABCG-2F and ABCG-2R (SEQ ID NO). :17-18).
- the real-time PCR reaction system was as follows: SYBR Green Mix 5 ⁇ L, Forward Primer 0.5 ⁇ L, Reverse Primer 0.5 ⁇ L, cDNA 1 ⁇ L, and ultrapure water 3 ⁇ L.
- the PCR reaction procedure was: denaturation at 95 ° C for 5 min; denaturation at 95 ° C for 15 s, annealing at 60 ° C for 1 min, cycle 40 times; 60 ° C for 30 s.
- the dissolution curve was started at a temperature of 60 ° C; the final temperature was 95 ° C; the holding time was 1 s; and the temperature was increased by 0.2 ° C.
- the results of real-time quantitative PCR were shown in Figure 3.
- the ZmABCG20 gene was expressed only in the spikelets of V10-V15, and the expression was sharply increased in V12, only slightly expressed in other periods; in roots, stems, leaves, ears, The expression of ZmABCG20 was not detected in other tissues such as Nei Ying and Wai Ying.
- the V12 phase corresponds to the pollen mononuclear phase, and its outer wall is forming. This expression organization and period are consistent with the functions of Arabidopsis and rice homologous genes.
- the ZmABCG20 gene has two gene annotation numbers, GRMZM2G076526 and Zm00001d046537, for a total of 8 predicted transcripts.
- GRMZM2G076526 and Zm00001d046537 for a total of 8 predicted transcripts.
- cDNA amplification obtained from the spikes of Kyosuke 2000 male flowers was amplified with primers covering the full length of the ZmABCG20 coding region, ZmABCG20_T1 to T4 (see Table 1 for the sequence), and the product was as in Example 6. The method was isolated and sequenced. Sequencing Results
- the ZmABCG20 coding region is set forth in SEQ ID NO: 5 and is identical to GRMZM2G076526-T001 (SEQ ID NO: 2).
- zmabcg20-1 is located at the 246th base of the coding region, ie, the 326th base of the start codon in the genomic sequence, and is located in the second explicit
- the deletion of the 4 base TGCA of the subunit results in a frameshift mutation after the 82nd amino acid residue in the translated protein, and the translation is terminated early after translation to the 100th amino acid residue.
- the coding region sequence of the mutant gene zmabcg20-1 is shown in SEQ ID NO: 8, and the encoded protein sequence is shown in SEQ ID NO: 9.
- the ZmABCG20 genomic sequence, coding region sequence and protein sequence of B73 are shown in SEQ ID NO: 1, SEQ ID NO: 2 and SEQ ID NO: 3, respectively; the ZmABCG20 genomic sequence, coding region sequence and protein sequence of Jingke ⁇ 2000 are shown in SEQ, respectively. ID NO: 4, SEQ ID NO: 5 and SEQ ID NO: 6.
- the ZmABCG20 gene structure and the zmabcg20-1 mutation site are shown in Figure 4.
- a pair of gene-specific primers were designed according to the sequence flanking the mutation site obtained in Example 6: forward primer 3326_F1, nucleotide sequence shown as SEQ ID NO: 10; reverse primer 3326_R1, nucleotide sequence thereof As shown in SEQ ID NO:11.
- the size of the product amplified by the above primer pair is 79 bp, it indicates that the genotype of the plant to be tested is wild type; if the size of the amplified product is 75 bp, it indicates that the plant to be tested is a zmabcg20-1 mutant; The size of the amplified product was 79 bp and 75 bp, indicating that the ZmABCG20 gene of the plant to be tested was a heterozygous genotype of the wild type and zmabcg20-1 mutant.
- the PCR reaction system consisted of 1 ⁇ L of 10 ⁇ reaction buffer, 0.25 ⁇ L of dNTP, 0.25 ⁇ L of forward primer and 0.25 ⁇ L of reverse primer, 0.5 U of Taq enzyme, and 1 ⁇ L of 10 ng/ ⁇ L of template DNA, and the total volume was supplemented to 10 ⁇ L with ultrapure water. .
- the PCR reaction procedure was: denaturation at 94-98 ° C for 1-3 min, and then the following cycles were performed: denaturation at 95 ° C for 20 s, renaturation at 53-58 ° C for 20 s, extension at 72 ° C for 30 s, 30-40 cycles.
- the amplified product was separated by 6% polyacrylamide gel electrophoresis, and electrophoresed under a 40 W constant power electric field for 1 hr. After silver nitrate staining, the electropherogram was photographed.
- the results are shown in Figure 5.
- the size of the amplified product of the wild type control is 79 bp; the size of the amplified product of the sterile line in the F 2 spike line is 75 bp; the size of the amplified product of all fertile plants is 79 bp, or 79 bp + 75 bp. Banded type, but not homozygous 75bp band type. This result indicates that the mutation site described in Example 6 is co-segregating with the recessive nuclear male sterility gene.
- this example constructs an RNAi vector of the gene.
- the carrier construction process is shown in Figure 6, and the specific method is as follows:
- the high specificity cDNA fragment SEQ ID NO: 23 in ZmABCG20 was selected as the RNAi target sequence.
- a forward fragment 17N19-1 of the RNAi stem-loop structure was amplified with primer pairs 17N19-F1 (SEQ ID NO: 21) and 17N19-R1 (SEQ ID NO: 22);
- the reverse fragment 17N19-2 of the RNAi stem-loop structure was amplified with primer pairs 17N19-F2 (SEQ ID NO: 19) and 17N19-R2 (SEQ ID NO: 20).
- the intermediate vector was provided by pBSK-RTM (provided by Chengdu Biotech Co., Ltd., and the vector pBSK-RTM was engineered from plasmid pBSK. It contains the intron of the Arabidopsis RTM1 gene as shown in SEQ ID NO: 24. As shown in Figure 6, the left side of the intron is the SacI and NotI restriction sites, and the right side is the XbaI and BamHI restriction sites).
- the pBSK-RTM and forward fragments were digested with SacI and NotI, ligated into E. coli, and 8 transformants were picked for PCR verification. Two positive transformants were picked and plasmids were extracted and sequenced to obtain pBSK-17N19-1 vector. .
- the 17N19 gene reverse fragment 17N19-2 was cloned using pBSK-17N19-1 as a template.
- the pBSK-17N19-1 and the reverse fragment 17N19-2 were digested with XbaI and BamHI, ligated into E. coli, and 8 transformants were picked for PCR verification. A positive transformant was picked and the plasmid was extracted and sequenced, and confirmed to be the target vector pBSK-17N19R.
- the pBSK-17N19R vector was digested with BamHI and SacI, and the target fragment containing the forward fragment + RTM+ inverted fragment was recovered.
- the pCambia3301ky plasmid was digested with BamHI and SacI (provided by Chengdu Tuo Biotechnology Co., Ltd., in pCambia3301 plasmid).
- a 35S promoter was inserted upstream of the multiple cloning site to obtain pCambia3301ky).
- the target fragment and pCambia3301ky were ligated to transform E. coli.
- a PCR-positive transformant was picked and extracted with BamHI and SacI.
- the large fragment of the positive fragment (forward fragment + RTM + reverse fragment) and the pCambia3301ky plasmid skeleton band were electrophoresed. The results showed that the target fragment was correctly ligated to pCambia3301ky.
- the vector pCambia3301-17N19R the RNAi vector was constructed.
- composition of MS and N6 medium is as follows:
- the medium used in the remaining steps is as follows:
- YEB culture solution 5.0 g/L yeast, 10.0 g/L peptone, 5.0 g/L NaCl, 50.0 mg/L kanamycin and 25.0 mg/L rifampicin, pH 6.8;
- Infecting solution 2,4-D l.0mg/L, L-valine 700mg/L, hydrolyzed casein 100mg/L, inositol 120mg/L, sucrose 68g/L, glucose 36g / L, acetosyringone 100 ⁇ mol / L, pH 5.2;
- Co-culture medium N6 basic medium, adding 1.38 g/L of proline, 500 mg/L of hydrolyzed casein, 120 mg/L of inositol, 2,4-D 2.0 mg/L, 0.7% of agar, 3% of sucrose, acetyl Syringone 100 ⁇ mol/L, cysteine 200mg/L, AgNO 3 0.85mg/L, pH6.0;
- Recovery medium N6 basic medium, adding 1.38g/L of proline, 500mg/L of casein, 120mg/L of inositol, 2,4-D 2.0mg/L, 0.7% of agar, 3% of sucrose, AgNO 3 0.85mg / L, cephalosporin 400mg / L, pH 5.8;
- the first round of screening medium 2,4-D l.0mg / L, L-valine 700mg / L, hydrolyzed casein 100mg / L, mannitol 20g / L, inositol 120mg /L, agar 0.7%, sucrose 3%, cephalosporin 400 mg / L, AgNO 3 0.85 mg / L, bialaphos 0.3 mg / L, pH 5.8;
- the second round of screening medium based on the first round of screening medium, the concentration of bialaphos was increased to 0.6 mg / L;
- Differentiation medium 1 mg/L kinetin was added to the basic medium MS, 100 mg/L hydrolyzed casein, 200 mg/L cephalosporin, 0.7% agar, 3% sucrose, pH 5.8;
- Rooting medium 1/2 MS basic medium was added with 100 mg/L hydrolyzed casein, 700 mg/L L-valine, 0.2 mg/L IBA, 0.7% agar, 3% sucrose, pH 5.8.
- Dyeing young embryos Single colonies of genetically engineered Agrobacterium were picked from the plate and inoculated in YEB medium, cultured at 28 ° C, 220 rpm for 20 h - 36 h; when the bacteria reached logarithmic growth phase, centrifuged at 4 ° C, 3000 rpm After 10 min, the cells were collected by centrifugation and resuspended to OD ⁇ 0.5 with the infecting solution to be used for infection. Immerse the 150 young embryos with the dip solution for 5 min - 10 min, and gently blot the dip solution with filter paper.
- Co-cultivation and recovery culture The immature embryos that had been digested were transferred to a common medium, and cultured at 22 ° C for 3 days, transferred to a recovery medium, and cultured at 28 ° C for 7 days.
- the selected resistant calli were transferred to the differentiation medium and cultured at 25 ° C for 7 days; then cultured at 25 ° C, 16 h light (light intensity 2000 lux) - 8 h dark alternating cycle, wait for seedling When the length is about 5 cm, it is transferred to the rooting medium and cultured at 28 ° C for 15 days.
- Refining seedling transplanting transplanting the seedlings after rooting cultivation into small pots filled with nutrient soil, cultivating for 10 days at 28 °C; transplanting the seedlings to the greenhouse (natural light, daily temperature 32 ° C, night temperature 28 Culture in °C).
- the seedlings transplanted through the above steps were identified by primer PCR, and it was confirmed that 5 strains were transform-positive strains, and the ZmABCG20 RNAi fragment designed in Example 9 was carried.
- the zmabcg20-1 mutant phenotype and mutant gene were identical to the ZmABCG20 homologous gene mutants in Arabidopsis and rice; the ZmABCG20 gene was specifically expressed in the young male spikelets, while in other periods and None of the tissues were expressed; the sterile phenotype was co-segregated with the zmabcg20-1 mutant gene; knocking out the ZmABCG20 gene resulted in a male sterility phenotype consistent with zmabcg20-1.
- ZmABCG20 is an essential gene for male fertility development in maize; its lack of function can lead to a male sterility phenotype of maize; the male sterility phenotype of the zmabcg20-1 mutant is produced by the ZmABCG20 gene described in Example 6. Caused by point mutations.
- Amplification of maize genomic DNA using primers pZmABCG20_F (sequence as shown in SEQ ID NO: 13) and pZmABCG20_R (sequence as shown in SEQ ID NO: 14) can obtain a DNA fragment of 1653 bp in size, with a 1634 bp upstream of the initiation codon ATG. (SEQ ID NO: 12).
- the sequence was analyzed using the online transcription component analysis tool PlantCARE (http://bioinformatics.psb.ugent.be/webtools/plantcare/html/) and found to be CAAT-box and TATA-box at +1237 and +1385 respectively.
- abscisic acid response element ABRE GCAACGTGTC, +1236)
- jasmonic acid response elements TGACG_motif TGACG, +655
- CGTCA_motif CGTCA, +765
- gibberellin response element GRAE_motif TCTGTTG, +513; AAACAGA, +1397).
- CAANNNNATC circadian rhythm control element
- the mutant obtained by the present invention and the functional marker of the mutant gene described in Example 9 can be used for various molecular marker-assisted selection methods, and backcrossing is taken as an example, and the sterile gene zmabcg20-1 can be obtained according to the procedure of FIG. Through hybridization to other corn genetic backgrounds:
- the F 1 seed was obtained by crossing the recipient maize material with the male parent;
- Seeding BC 1 seeds, obtaining not less than 500 seedlings, collecting individual leaves in the seedling stage, extracting DNA according to the method described in Example 4, and performing amplification and electrophoresis using the primer pair (3326_F1, 3326_R1) in Example 9. Select a single plant with a genotype that is heterozygous to continue planting, and discard the homozygous wild-type individual plants;
- a set of (eg, 100, or 200, etc.) molecular markers that are polymorphic between the mutant zmabcg20-1 and the recurrent parent and uniformly distributed across the genome include but not limited to SSR, INDEL, SNP, EST , RFLP, AFLP, RAPD, SCAR and other types of markers, identify the individual plants selected in step 3, select materials with high similarity with the recurrent parent (for example, greater than 88% similarity, or 2% selection rate, etc.);
- step 3 for the selected material, and select BC with similarity to the recurrent parent than the selection criteria (such as similarity greater than 98%, or 2% selection rate, etc.) 2 generation plants;
- step 8 The selected plants in step 8 were screened according to the method of step 4, and 100% background homozygous individual plants were selected. If the genotype of the selected plant is a homozygous mutant, the single plant is our final target material, which can be further mixed with the recurrent parent to preserve the material or hybridize with other corn materials. If the selected single plant is a heterozygous belt type, it can be directly used to preserve the germplasm, or obtain a sterile plant by cross-breeding for cross breeding or seed production.
- the invention provides the application of the maize gene ZmABCG20 in regulating male fertility of crops.
- the genomic DNA sequence of ZmABCG20 in maize variety B73 is shown in SEQ ID NO: 1, and the encoded protein sequence is shown in SEQ ID NO: 3.
- the present invention also provides a mutant zmabcg20-1 of the gene ZmABCG20 and the use thereof, and the mutated gene sequence is shown as SEQ ID NO: 7; and a method for identifying a molecular marker of the mutated gene is also provided.
- the pollen development control gene, mutant and molecular marker thereof provided by the invention can be applied to crop cross breeding and hybrid seed production.
- the invention also provides the application of the maize gene ZmABCG20 in regulating male fertility of crops.
- the genomic DNA sequence of ZmABCG20 in maize variety B73 is shown in SEQ ID NO: 1, and the encoded protein sequence is shown in SEQ ID NO: 3.
- the present invention also provides a mutant zmabcg20-1 of the gene ZmABCG20 and the use thereof, and the mutated gene sequence is shown as SEQ ID NO: 7; and a method for identifying a molecular marker of the mutated gene is also provided.
- the pollen development control gene, the mutant and the molecular marker thereof provided by the invention can be applied to crop cross breeding and hybrid seed production, and have good economic value and application prospect.
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biomedical Technology (AREA)
- Biotechnology (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- General Engineering & Computer Science (AREA)
- Cell Biology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Botany (AREA)
- Plant Pathology (AREA)
- Physics & Mathematics (AREA)
- Gastroenterology & Hepatology (AREA)
- Medicinal Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
Abstract
玉米基因ZmABCG20在调控作物雄性育性中的应用,玉米品种B73中ZmABCG20的基因组DNA序列如SEQ ID NO:1所示,所编码的蛋白序列如SEQ ID NO:3所示。基因ZmABCG20的突变体zmabcg20-1及其应用,突变基因序列如SEQ ID NO:7所示;还提供了该突变基因的分子标记鉴定方法。与玉米雄性生育力相关的DNA分子标记,所述DNA分子标记位于玉米基因ZmABCG20核酸序列起始密码子后第326-329位碱基,序列为TGCA,该4个碱基缺失的玉米品系表现出隐性雄性核不育性状。本发明的DNA分子标记可用于鉴定或选育雄性不育玉米种质资源等。The application of the maize gene ZmABCG20 in regulating male fertility of crops, the genomic DNA sequence of ZmABCG20 in maize variety B73 is shown in SEQ ID NO: 1, and the encoded protein sequence is shown in SEQ ID NO: 3. The mutant zmabcg20-1 of the gene ZmABCG20 and its use, the mutated gene sequence is shown in SEQ ID NO: 7, and a molecular marker identification method for the mutated gene is also provided. a DNA molecular marker associated with male fertility in maize, the DNA molecular marker located at bases 326-329 after the start codon of the maize gene ZmABCG20 nucleic acid sequence, the sequence is TGCA, and the 4 base deleted maize line exhibits Recessive male sterility traits. The DNA molecular marker of the present invention can be used to identify or breed male sterile maize germplasm resources and the like.
Description
交叉引用cross reference
本申请要求2017年9月30日提交的专利名称为“玉米基因ZmABCG20在调控作物雄性育性中的应用”的第201710919714.6号中国专利申请和2017年9月30日提交的专利名称为“与玉米雄性生育力相关的DNA分子标记及其应用”的第201710919712.7号中国专利申请的优先权,其全部公开内容通过引用整体并入本文。This application claims the patent application entitled "The Application of Maize Gene ZmABCG20 in Regulating Crop Male Fertility", filed on September 30, 2017, and the patent name filed on September 30, 2017 is "with corn" The priority of the Chinese Patent Application No. 201710919712.7, the entire disclosure of which is incorporated herein by reference.
本发明属于基因工程和分子育种领域,具体地说,涉及玉米基因ZmABCG20在调控作物雄性育性中的应用以及与玉米雄性生育力相关的DNA分子标记及其应用。The invention belongs to the field of genetic engineering and molecular breeding, and in particular relates to the application of the maize gene ZmABCG20 in regulating male fertility of crops and the DNA molecular markers associated with male fertility of corn and applications thereof.
植物雄性不育突变是自然界中十分普遍的现象,至少己在43个科、162个属的617个物种中发现了雄性不育突变体。在遗传上植物雄性不育分为细胞核雄性不育,细胞质雄性不育和细胞核细胞质互作雄性不育三大类:1)细胞核雄性不育由细胞核基因突变产生,有显性突变和隐性突变,有孢子体基因突变和配子体基因突变。显性突变和配子体基因突变只能通过雌配子遗传,隐性突变既可通过雌配子也可通过雄配子进行遗传,而且遵循孟德尔定律。目前已克隆了一些孢子体隐性核不育基因,如拟南芥的ms2,玉米的ms45和水稻的mil1等(Aarts等,1997,The Arabidopsis MALE STERILITY 2protein shares similarity with reductases in elongation/condensation complexes,Plant Journal,12:615-623;Albertsen,2006,Male tissue-preferred regulatory sequences of MS45gene and method of using same,专利号:US7154024B2;Hong等,2012,Somatic and reproductive cell development in rice anther is regulated by a putative glutaredoxin,Plant Cell,24:577-588);一些配子体隐性核不育基因也被克隆,如拟南芥的两个小孢子有丝分裂异常的突变体sidecar pollen和gemini pollen(Oh等,2010,The SIDECAR POLLEN gene encodes a microspore-specific LOB/AS2domain protein required for the correct timing and orientation of asymmetric cell division,Plant Journal,64:839-50;Park等,1998,The Arabidopsis thaliana gametophytic mutation gemini pollen1 disrupts microspore polarity,division asymmetry and pollen cell fate,Development,125:3789-99);玉米上还克隆了一个孢子体显性核不育基因MS44(Cigan and Albertsen,1998,Reversible nuclear genetic system for male sterility in transgenic plants,US5750868);2)细胞质雄性不育则是由细胞质基因控制,并没有相对应的核恢复基因,属母性遗传;3)细胞核细胞质互作雄性不育由细胞质基因和细胞核基因共同控制,其实质是细胞质与细胞核遗传物质不和的结果。不育细胞质是一些由突变线粒体基因引起,但有相对应的核恢复基因,能抑制不育细胞质基因。不育细胞质基因可产生一种新的蛋白质,够影响线粒体正常功能(Chen and Liu,2014,Male sterility and fertility restoration in crops,Annu Rev Plant Biol,65:5.1-5.28)。在育性恢复基因方面,目前水稻中已经克隆了Rf-1,Rf-2,Rf-4,Rf-5等基因(Komori等,2004,Map-based cloning of a fertility restorer gene,Rf-1,in rice(Oryza sativa L.),Plant Journal,37:315-325;Itabashi等,2011,The fertility restorer gene,Rf2,for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein,Plant Journal,65:359-367;Tang等,2014,The rice restorer Rf4for wild-abortive cytoplasmic male sterility encodes a PPR protein that functions in reduction of WA352transcripts,Molecular Plant,7:1497-500;Hu等,2012,The rice pentatricopeptide repeat protein RF5restorers fertility in Hong-Lian Cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162,Plant Cell,24:109-22)。Plant male sterility mutations are a very common phenomenon in nature, and male sterility mutants have been found in at least 617 species of 43 families and 162 genera. In genetics, male sterility is divided into three categories: nuclear male sterility, cytoplasmic male sterility and nuclear cytoplasmic interaction. 1) Nuclear male sterility is caused by nuclear gene mutation, with dominant and recessive mutations. , sporozoite gene mutations and gametophytic gene mutations. Dominant mutations and gametophytic gene mutations can only be inherited by female gametes, which can be inherited either by female gametes or by male gametes, and follow Mendel's law. Some sporozoite recessive nuclear sterility genes have been cloned, such as ms2 of Arabidopsis thaliana, ms45 of maize and mil1 of rice (Aarts et al., 1997, The Arabidopsis MALE STERILITY 2 protein shares similarity with reductases in elongation/condensation complexes, Plant Journal, 12: 615-623; Albertsen, 2006, Male tissue-preferred regulatory sequences of MS45gene and method of using same, Patent No.: US7154024B2; Hong et al, 2012, Somatic and reproductive cell development in rice anther is regulated by a putative Glutaredoxin, Plant Cell, 24:577-588); some gametophytic recessive genic male sterility genes have also been cloned, such as the two microspores of Arabidopsis thaliana mitotic abnormalities sidecar pollen and gemini pollen (Oh et al, 2010, The SIDECAR POLLEN gene encodes a microspore-specific LOB/AS2domain protein required for the correct timing and orientation of asymmetric cell division, Plant Journal, 64: 839-50; Park et al, 1998, The Arabidopsis thaliana gametophytic mu Ttation gemini pollen1 disrupts microspore polarity, division asymmetry and pollen cell fate, Development, 125:3789-99); a sporophytic dominant sterility gene MS44 was also cloned on maize (Cigan and Albertsen, 1998, Reversible nuclear genetic system for Male sterility in transgenic plants, US5750868); 2) cytoplasmic male sterility is controlled by cytoplasmic genes, and there is no corresponding nuclear restorer gene, which is maternal inheritance; 3) cytoplasmic cytoplasmic interaction male sterility by cytoplasmic gene and nuclear gene Joint control, the essence of which is the result of disharmony between cytoplasm and nuclear genetic material. Sterile cytoplasm is caused by mutant mitochondrial genes, but has a corresponding nuclear restorer gene that inhibits sterile cytoplasmic genes. Sterile cytoplasmic genes produce a new protein that affects normal mitochondrial function (Chen and Liu, 2014, Male sterility and fertility restoration in crops, Annu Rev Plant Biol, 65:5.1-5.28). In terms of fertility restorer genes, genes such as Rf-1, Rf-2, Rf-4, and Rf-5 have been cloned in rice (Komori et al., 2004, Map-based cloning of a fertility restorer gene, Rf-1, In rice(Oryza sativa L.), Plant Journal, 37: 315-325; Itabashi et al, 2011, The fertility restorer gene, Rf2, for Lead Rice-type cytoplasmic male sterility of rice encodes a mitochondrial glycine-rich protein, Plant Journal , 65: 359-367; Tang et al, 2014, The rice restorer Rf4 for wild-abortive cytoplasmic male sterility encodes a PPR protein that functions in reduction of WA352transcripts, Molecular Plant, 7: 1497-500; Hu et al, 2012, The rice pentatricopeptide Repeat protein RF5restorers fertility in Hong-Lian Cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162, Plant Cell, 24: 109-22).
玉米已成为世界和我国第一大粮食作物,是饲料、食品加工、生物能源的重要原料,在国外也是消费量最大的蔬菜之一。目前国内种植的玉米几乎全部为杂交玉米。玉米杂交授粉主要通过人工去雄进行杂交,需耗费大量的劳动力,成本高昂;而且由于去雄损伤玉米顶部叶片,会造成制种产量损失。利用雄性不育系制种可解决人工去雄带来的问题。但玉米中曾经应用的胞质雄性不育系存在一些缺陷:首先由于胞质雄性不育系需要特定的恢复基因恢复育性,因此种质资源利用率很低,限制了优良品种的选 育效率;其次部分不育系育性不稳定,在特定条件下可恢复育性,影响杂交种的纯度;最后,由于胞质基因型单一,造成玉米斑病大爆发,直接导致胞质雄性不育技术退出市场。普通核不育则可避免这些问题,如在玉米中得以应用,不但可以节省人工去雄所需的劳动力成本,而且可以提高制种产量。Maize has become the world's largest food crop in the world and is an important raw material for feed, food processing and bio-energy. It is also one of the most consumed vegetables in foreign countries. At present, almost all corn grown in China is hybrid corn. Maize hybrid pollination is mainly carried out by artificial emasculation, which requires a large amount of labor and is costly; and because the emasculation damages the top leaves of the corn, it will cause loss of seed production. The use of male sterile lines for seed production can solve the problems caused by artificial emasculation. However, the cytoplasmic male sterile lines used in maize have some defects: firstly, because the cytoplasmic male sterile line needs specific recovery genes to restore fertility, the utilization rate of germplasm resources is very low, which limits the breeding efficiency of excellent varieties. Secondly, the sterile line of the sterile line is unstable, and the fertility can be restored under certain conditions, which affects the purity of the hybrid; finally, due to the single cytoplasmic genotype, the corn leaf disease is outbreak, which directly leads to the cytoplasmic male sterility technology. qiut the market. Ordinary nuclear infertility can avoid these problems. For example, it can be used in corn, which not only saves the labor cost required for artificial emasculation, but also increases seed production.
植物ABC蛋白家族是一类膜转运蛋白,定位于细胞膜上,负责代谢物的跨膜转运;ABCG转运蛋白是其中最大的一个亚家族。ABCG蛋白按结构特征主要可分为两类:全尺寸蛋白含有2个核苷酸结合结构域和2个跨膜区,可独自形成完整的跨膜转运结构,完成底物的转运;半尺寸蛋白只有1个核苷酸结合结构域和1个跨膜区,需要与另一个半尺寸蛋白分子结合,才能形成完整的转运单位(Verrier等,2008,Plant ABC proteins–a unified nomenclature and updated inventory.Cell,Trends in Plant Science,13(4):151-159.)。拟南芥的AtABCG26基因和水稻中的直系同源基因OsABCG15编码一个花粉壁成分孢粉素前体的跨膜转运蛋白,在花药绒粘层中表达,将孢粉素前体从绒粘层细胞转运到花药室中,在花粉细胞壁上合成孢粉素。突变体atabcg26表现为花粉数量和雄性育性均极低;水稻osabcg15突变体则完全雄性不育,没有花粉;此外,水稻OsABCG26突变后也表现出雄性完全不育,表型与osabcg15相似(Zhao等,2016,ATP binding cassette G transporters and plant male reproduction.Plant Signal and Behavior,11(3):e1136764.doi:10.1080/15592324.2015.1136764)。通过基因组生物信息学分析,Pang等(Pang等,2013,Inventory and general analysis of the ATP-binding cassette(ABC)gene superfamily in maize(Zea May L.).Gene,2013,526(2):411-428)从玉米种鉴定出54个ABCG基因,但目前仍然没有发现与雄性育性相关的基因。The plant ABC protein family is a type of membrane transporter that localizes to the cell membrane and is responsible for the transmembrane transport of metabolites; the ABCG transporter is one of the largest subfamilies. ABCG proteins can be divided into two main types according to their structural features: full-size proteins contain two nucleotide binding domains and two transmembrane regions, which can form a complete transmembrane transport structure on their own, complete substrate transport; half-size proteins Only one nucleotide binding domain and one transmembrane domain need to bind to another half-size protein molecule to form a complete transport unit (Verrier et al., 2008, Plant ABC proteins–a unified nomenclature and updated inventory. Cell , Trends in Plant Science, 13(4): 151-159.). The AtABCG26 gene of Arabidopsis thaliana and the ortholog gene OsABCG15 in rice encode a transmembrane transporter of pollen wall component sporopollen precursor, expressed in the anther velvet layer, and the sporopollen precursor from the velvety cell Transfer to the anther chamber to synthesize sporopollenin on the pollen cell wall. The mutant atabcg26 showed extremely low pollen count and male fertility; the rice osabcg15 mutant was completely male sterile and had no pollen; in addition, the rice OsABCG26 mutation also showed male complete sterility, and the phenotype was similar to osabcg15 (Zhao et al. , 2016, ATP binding cassette G transporters and plant male reproduction. Plant Signal and Behavior, 11(3): e1136764.doi: 10.1080/15592324.2015.1136764). By genomic bioinformatics analysis, Pang et al. (Pang et al., 2013, Inventory and general analysis of the ATP-binding cassette (ABC) gene superfamily in maize (Zea May L.). Gene, 2013, 526(2): 411- 428) 54 ABCG genes were identified from maize varieties, but no genes related to male fertility were found.
发明内容Summary of the invention
本发明的目的是提供玉米基因ZmABCG20在调控作物雄性育性中的应用。The object of the present invention is to provide a use of the maize gene ZmABCG20 for regulating crop male fertility.
本发明的另一目的是提供玉米基因ZmABCG20的突变体zmabcg20-1及其应用。Another object of the present invention is to provide a mutant zmabcg20-1 of the maize gene ZmABCG20 and uses thereof.
为了实现本发明目的,第一方面,本发明提供玉米基因ZmABCG20在调控作物雄性育性中的应用,其中基因ZmABCG20的cDNA序列为:In order to achieve the object of the present invention, in a first aspect, the present invention provides the use of the maize gene ZmABCG20 for regulating crop male fertility, wherein the cDNA sequence of the gene ZmABCG20 is:
i)SEQ ID NO:2所示的核苷酸序列;i) the nucleotide sequence shown in SEQ ID NO: 2;
ii)SEQ ID NO:2所示的核苷酸序列经取代、缺失和/或增加一个或多个核苷酸且表达相同功能蛋白质的核苷酸序列;Ii) a nucleotide sequence in which the nucleotide sequence shown by SEQ ID NO: 2 is substituted, deleted and/or increased by one or more nucleotides and expresses the same functional protein;
iii)在严格条件下与SEQ ID NO:2所示序列杂交且表达相同功能蛋白质的核苷酸序列,所述严格条件为在含0.1%SDS的0.1×SSPE或含0.1%SDS的0.1×SSC溶液中,在65℃下杂交,并用该溶液洗膜;或Iii) a nucleotide sequence which hybridizes under stringent conditions to the sequence of SEQ ID NO: 2 and which expresses the same functional protein, which is 0.1 x SSPE containing 0.1% SDS or 0.1 x SSC containing 0.1% SDS. In solution, hybridize at 65 ° C and wash the membrane with the solution; or
iv)与i)、ii)或iii)的核苷酸序列具有85%以上同源性且表达相同功能蛋白质的核苷酸序列。Iv) a nucleotide sequence having more than 85% homology to the nucleotide sequence of i), ii) or iii) and expressing the same functional protein.
前述的应用,所述调控是指使作物具有雄性育性。所述应用包括:In the foregoing application, the regulation refers to making the crop malely fertile. The applications include:
1)使作物包含ZmABCG20基因;或1) causing the crop to contain the ZmABCG20 gene; or
2)使作物表达ZmABCG20基因编码的蛋白。2) The crop is expressed with a protein encoded by the ZmABCG20 gene.
本发明首先对玉米品种京科糯2000种子(M 0代)进行钴60辐射诱变处理,种植处理的种子获M 1代植株;M 1代植株自交产生种子(为M 2代),种植M 2代植株,对M 2代植株进行形态学,组织学和遗传学鉴定,筛选不育植株;然后对不育植株进行基因测序和DNA序列分析,在分子水平上进行验证。最后获得纯合不育单株,并用于杂交育种和生物技术研究。 The invention firstly performs cobalt 60 radiation mutagenesis treatment on the corn variety Jingkejing 2000 seeds (M 0 generation), the planted seeds are obtained from the M 1 generation plants; the M 1 generation plants are selfed to produce seeds (for the M 2 generation), planting M 2 generation plants were subjected to morphological, histological and genetic identification of M 2 generation plants, and sterile plants were screened; then the sterile plants were subjected to gene sequencing and DNA sequence analysis, and verified at the molecular level. Finally, homozygous sterile plants were obtained and used for cross breeding and biotechnology research.
本发明提供的玉米ZmABCG20基因(花粉发育控制基因),其突变后表现为完全雄性不育。其核苷酸序列如SEQ ID NO:1或SEQ ID NO:4所示;其编码区的DNA序列如SEQ ID NO:2或SEQ ID NO:5所示;其编码的蛋白序列如SEQ ID NO:3或SEQ ID NO:6所示。The maize ZmABCG20 gene (pollen development control gene) provided by the present invention exhibits complete male sterility after mutation. Its nucleotide sequence is shown as SEQ ID NO: 1 or SEQ ID NO: 4; the DNA sequence of its coding region is shown as SEQ ID NO: 2 or SEQ ID NO: 5; the encoded protein sequence is SEQ ID NO: : 3 or SEQ ID NO: 6.
第二方面,本发明提供玉米基因ZmABCG20在制备转基因植物中的应用。例如,将携带有基因ZmABCG20cDNA或基因组序列的重组表达载体转入野生型玉米愈伤组织中,转化后的材料经过共培养-筛选-分化-生根-转基因苗的锻炼和移栽,筛选得到转基因植株,然后将转基因玉米与雄性不育玉米杂交,来恢复雄性不育玉米的育性。In a second aspect, the invention provides the use of the maize gene ZmABCG20 in the preparation of a transgenic plant. For example, a recombinant expression vector carrying the gene ZmABCG20 cDNA or genomic sequence is transferred into wild type maize callus, and the transformed material is subjected to co-culture-screening-differentiation-rooting-transgenic seedling training and transplanting, and the transgenic plant is screened. Then, the transgenic corn is crossed with the male sterile maize to restore the fertility of the male sterile maize.
第三方面,本发明提供玉米基因ZmABCG20在恢复雄性不育植物的育性中的应用,其中所述雄性不育性状是由该基因突变体所导致的。In a third aspect, the invention provides the use of the maize gene ZmABCG20 for restoring fertility in a male sterile plant, wherein the male sterility trait is caused by the genetic mutant.
第四方面,本发明提供通过抑制玉米ZmABCG20基因活性来制备雄性核不育的转基因玉米的方法,利用基因沉默、基因抑制、基因敲除或定向基因突变等技术使玉米中的ZmABCG20基因在转录、翻译或翻译后的 蛋白活性水平方面下降,获得雄性核不育的转基因玉米。In a fourth aspect, the present invention provides a method for preparing a male sterility transgenic maize by inhibiting the activity of a maize ZmABCG20 gene, which utilizes gene silencing, gene suppression, gene knockout or directed gene mutation to transcribe the ZmABCG20 gene in maize. The level of protein activity after translation or translation is reduced, and male genic sterile GM maize is obtained.
例如,可将携带有针对基因ZmABCG20cDNA序列的RNAi序列,与组成型启动子或花器官特异表达启动子可操作地连接,转入植物愈伤组织中,转化后的材料经过共培养-筛选-分化-生根-转基因苗的锻炼和移栽,筛选得到雄性核不育的转基因玉米。For example, an RNAi sequence carrying a cDNA sequence against the gene ZmABCG20 can be operably linked to a constitutive promoter or a floral organ-specific expression promoter, and transferred into a plant callus, and the transformed material is subjected to co-culture-screening-differentiation. - Rooting-transgenic seedlings were exercised and transplanted, and male sterility GM maize was screened.
在本发明的一个具体实施方式中,所述RNAi作用的靶DNA序列如SEQ ID NO:23所示。In a specific embodiment of the invention, the target DNA sequence for RNAi action is set forth in SEQ ID NO:23.
第五方面,本发明提供由上述方法获得的生物材料在作物改良育种、制种中的应用。In a fifth aspect, the present invention provides the use of the biological material obtained by the above method in crop improved breeding and seed production.
第六方面,本发明提供玉米基因ZmABCG20在作物改良育种、制种中的应用。In a sixth aspect, the present invention provides the use of the maize gene ZmABCG20 in crop improved breeding and seed production.
前述的应用,使包含或表达所述ZmABCG20基因的植物,或按照上述方法或的ZmABCG20基因失活的植物,与同种具有优良农艺性状的作物进行杂交。In the foregoing application, a plant containing or expressing the ZmABCG20 gene, or a plant inactivated according to the above method or the ZmABCG20 gene, is hybridized with the same crop having excellent agronomic traits.
本发明中,所述作物是自花授粉或异花授粉作物,包括但不限于玉米、小麦或水稻等,优选玉米。In the present invention, the crop is a self-pollinating or cross-pollinated crop, including but not limited to corn, wheat or rice, etc., preferably corn.
本发明中,所述优良农艺性状包括但不限于产量提高、品质提高、抗病虫害、抗逆、抗倒伏等。In the present invention, the excellent agronomic traits include, but are not limited to, increased yield, improved quality, resistance to pests and diseases, stress resistance, lodging resistance, and the like.
第七方面,本发明提供用于抑制ZmABCG20基因活性的抑制剂,所述抑制剂选自shRNA、siRNA、dsRNA、miRNA、cDNA、反义RNA/DNA、低分子化合物、肽、抗体等中的至少一种。In a seventh aspect, the present invention provides an inhibitor for inhibiting the activity of a ZmABCG20 gene selected from at least one of shRNA, siRNA, dsRNA, miRNA, cDNA, antisense RNA/DNA, low molecular weight compound, peptide, antibody, and the like. One.
第八方面,本发明提供含有编码上述核酸分子抑制剂的表达盒、表达载体或克隆载体。In an eighth aspect, the invention provides an expression cassette, expression vector or cloning vector comprising an inhibitor encoding the nucleic acid molecule described above.
第九方面,本发明提供玉米基因ZmABCG20的突变体zmabcg20-1基因,其核酸序列为:In a ninth aspect, the present invention provides a mutant zmabcg20-1 gene of the maize gene ZmABCG20, the nucleic acid sequence of which is:
i)玉米基因ZmABCG2核酸序列起始密码子后第326-329位碱基发生4个碱基TGCA缺失所形成的突变基因;i) a mutant gene formed by a 4 base TGCA deletion at bases 326-329 after the start codon of the maize gene ZmABCG2 nucleic acid sequence;
ii)SEQ ID NO:7所示的核苷酸序列;Ii) the nucleotide sequence shown in SEQ ID NO:7;
iii)i)或ii)所示序列经取代、缺失和/或增加一个或多个核苷酸且表达相同功能蛋白质的核苷酸序列,且在与基因ZmABCG20的等同位置上包含4个碱基TGCA缺失;Iii) a nucleotide sequence in which the sequence shown in i) or ii) is substituted, deleted and/or added to one or more nucleotides and expresses the same functional protein, and comprises 4 bases at an equivalent position to the gene ZmABCG20 TGCA is missing;
iv)在严格条件下与i)或ii)所示序列杂交且表达相同功能蛋白质的核苷酸序列,且在与基因ZmABCG20的等同位置上包含4个碱基TGCA缺失;所述严格条件为在含0.1%SDS的0.1×SSPE或含0.1%SDS的0.1×SSC溶液中,在65℃下杂交,并用该溶液洗膜;或Iv) a nucleotide sequence which hybridizes under stringent conditions to the sequence shown in i) or ii) and which expresses the same functional protein, and which comprises a 4-base TGCA deletion at the equivalent position to the gene ZmABCG20; Hybridization at 65 ° C in 0.1 × SSPE containing 0.1% SDS or 0.1 × SSC solution containing 0.1% SDS, and washing the membrane with the solution; or
v)与i)或ii)的核苷酸序列具有85%以上同源性且表达相同功能蛋白质的核苷酸序列,且在与基因ZmABCG20的等同位置上包含4个碱基TGCA缺失。v) A nucleotide sequence having more than 85% homology to the nucleotide sequence of i) or ii) and expressing the same functional protein, and comprising a 4 base TGCA deletion at an equivalent position to the gene ZmABCG20.
玉米基因zmabcg20-1的编码区DNA序列如SEQ ID NO:8所示。由玉米基因zmabcg20-1编码的蛋白,其氨基酸序列如SEQ ID NO:9所示,或该序列经替换、缺失或添加一个或几个氨基酸形成的具有同等功能的氨基酸序列。The coding region DNA sequence of the maize gene zmabcg20-1 is shown in SEQ ID NO: 8. A protein encoded by the maize gene zmabcg20-1, the amino acid sequence of which is set forth in SEQ ID NO: 9, or an amino acid sequence of the same sequence formed by substitution, deletion or addition of one or several amino acids.
第十方面,本发明提供基因zmabcg20-1在调控玉米育性中的应用,所述应用包括:In a tenth aspect, the present invention provides the use of the gene zmabcg20-1 for regulating corn fertility, the application comprising:
1)使作物包含zmabcg20-1基因;或1) causing the crop to contain the zmabcg20-1 gene; or
2)使作物表达zmabcg20-1基因编码的蛋白。2) The crop is expressed by a protein encoded by the zmabcg20-1 gene.
前述的应用,使包含或表达所述突变体zmabcg20-1基因的玉米表现出隐性雄性核不育。In the foregoing application, maize containing or expressing the mutant zmabcg20-1 gene exhibits recessive male sterility.
第十一方面,本发明提供基因zmabcg20-1在玉米改良育种、制种中的应用。In an eleventh aspect, the present invention provides the use of the gene zmabcg20-1 in improved breeding and seed production of maize.
前述的应用,使包含或表达所述突变体zmabcg20-1基因的玉米与具有优良农艺性状的玉米进行杂交。In the foregoing application, corn comprising or expressing the mutant zmabcg20-1 gene is crossed with corn having excellent agronomic traits.
第十二方面,本发明提供表达盒、表达载体或克隆载体,其包括包含如所述基因zmabcg20-1的核酸序列。In a twelfth aspect, the invention provides an expression cassette, expression vector or cloning vector comprising a nucleic acid sequence comprising the gene zmabcg20-1.
第十三方面,本发明提供含有所述基因zmabcg20-1、或所述表达盒、表达载体或克隆载体的工程菌、宿主细胞、转基因细胞系。In a thirteenth aspect, the present invention provides an engineered bacteria, a host cell, or a transgenic cell line comprising the gene zmabcg20-1, or the expression cassette, expression vector or cloning vector.
第十四方面,本发明提供包含或表达所述基因zmabcg20-1的生物材料在制备转基因玉米中的应用。In a fourteenth aspect, the invention provides the use of a biomaterial comprising or expressing the gene zmabcg20-1 for the preparation of transgenic corn.
第十五方面,本发明提供雄花幼穗或雌雄同花的植物幼穗特异性启动子,所述启动子为:In a fifteenth aspect, the present invention provides a plant panicle-specific promoter of the male flower or the male and female, the promoter being:
i)SEQ ID NO:12所示的核苷酸序列;i) the nucleotide sequence shown in SEQ ID NO: 12;
ii)SEQ ID NO:12所示的核苷酸序列经取代、缺失和/或增加一个或 多个核苷酸且具有相同功能的核苷酸序列;Ii) a nucleotide sequence in which the nucleotide sequence shown by SEQ ID NO: 12 is substituted, deleted and/or increased by one or more nucleotides and has the same function;
iii)在严格条件下与SEQ ID NO:12所示序列杂交且具有相同功能的核苷酸序列,所述严格条件为在含0.1%SDS的0.1×SSPE或含0.1%SDS的0.1×SSC溶液中,在65℃下杂交,并用该溶液洗膜;或Iii) a nucleotide sequence which hybridizes under stringent conditions to the sequence of SEQ ID NO: 12 and which has the same function, in stringent conditions of 0.1 x SSPE containing 0.1% SDS or 0.1 x SSC solution containing 0.1% SDS Medium, hybridizing at 65 ° C, and washing the membrane with the solution; or
iv)与i)、ii)或iii)的核苷酸序列具有85%以上同源性且具有相同功能的核苷酸序列。Iv) a nucleotide sequence having more than 85% homology to the nucleotide sequence of i), ii) or iii) and having the same function.
第十六方面,本发明提供表达盒、表达载体或克隆载体,其包括包含如SEQ ID NO:12所示序列的核酸。In a sixteenth aspect, the invention provides an expression cassette, expression vector or cloning vector comprising a nucleic acid comprising the sequence set forth in SEQ ID NO: 12.
第十七方面,本发明提供工程菌、转基因细胞系,其含有所述特异性启动子、或所述表达盒或载体。In a seventeenth aspect, the invention provides an engineered bacterial, transgenic cell line comprising the specific promoter, or the expression cassette or vector.
第十八方面,本发明提供所述特异性启动子在调控下游基因表达中的应用。In a eighteenth aspect, the invention provides the use of the specific promoter for regulating downstream gene expression.
第十九方面,本发明提供所述特异性启动子在制备转基因植物中的应用。In a nineteenth aspect, the invention provides the use of the specific promoter in the preparation of a transgenic plant.
例如,将启动子序列与目的基因可操作地连接,用所得构建体转化目标植株,启动子驱动该目的基因特异地在雄花幼穗或雌雄同花的植物幼穗中表达。For example, a promoter sequence is operably linked to a gene of interest, and the resulting construct is used to transform a target plant, and the promoter drives the gene of interest to be specifically expressed in the young ears of the male flower or the male and female.
第二十方面,本发明提供一种与玉米雄性生育力相关的DNA分子标记,所述DNA分子标记位于玉米基因ZmABCG20核酸序列起始密码子后第326-329位碱基,序列为TGCA,该4个碱基缺失的玉米品系表现出隐性雄性核不育性状。In a twentieth aspect, the present invention provides a DNA molecular marker associated with male fertility in maize, the DNA molecule marker being located at bases 326-329 after the start codon of the maize gene ZmABCG20 nucleic acid sequence, the sequence being TGCA, The 4 base deleted maize line showed recessive male sterility.
第二十一方面,本发明提供特异性扩增所述DNA分子标记的引物,包括:In a twenty first aspect, the invention provides a primer for specifically amplifying a marker of the DNA molecule, comprising:
上游引物3326_F1:5′-CCAGACGAGGGCAGACCAG-3′(SEQ ID NO:10)Upstream primer 3326_F1: 5'-CCAGACGAGGGCAGACCAG-3' (SEQ ID NO: 10)
下游引物3326_R1:5′-GATCTCGCCAGGGTCCACA-3′SEQ ID NO:11)Downstream primer 3326_R1: 5'-GATCTCGCCAGGGTCCACA-3' SEQ ID NO: 11)
第二十二方面,本发明提供含有所述引物3326_F1和3326_R1的检测试剂或试剂盒。In a twenty second aspect, the invention provides a detection reagent or kit comprising the primers 3326_F1 and 3326_R1.
第二十三方面,本发明提供所述DNA分子标记、所述引物或所述检测试剂或试剂盒在玉米分子标记辅助育种中的应用。In a twenty-third aspect, the present invention provides the use of the DNA molecule marker, the primer or the detection reagent or kit in maize molecular marker-assisted breeding.
第二十四方面,本发明提供所述DNA分子标记、所述引物或所述检测试剂或试剂盒在鉴别或选育雄性不育玉米种质资源中的应用。具体方法如下:In a twenty-fourth aspect, the present invention provides the use of the DNA molecular marker, the primer or the detection reagent or kit for identifying or breeding a male sterile maize germplasm resource. The specific method is as follows:
提取待测玉米的基因组DNA,利用引物3326_F1和3326_R1进行PCR扩增反应,电泳检测扩增产物,若扩增产物出现一条大小为79bp的特征条带,则待测玉米的育性正常,对应的ZmABCG20基因型为野生型;若扩增产物出现一条大小为75bp的特征条带,则待测玉米为雄性不育品种,对应的ZmABCG20基因型为zmabcg20-1突变体;若扩增产物为79bp和75bp两条带型,则待测玉米为杂合基因型。The genomic DNA of the tested corn is extracted, and the PCR amplification reaction is carried out by using primers 3326_F1 and 3326_R1, and the amplified product is detected by electrophoresis. If a characteristic band of 79 bp is present in the amplified product, the fertility of the corn to be tested is normal, corresponding The genotype of ZmABCG20 is wild type; if a characteristic band of 75 bp is present in the amplified product, the maize to be tested is male sterile, and the corresponding ZmABCG20 genotype is zmabcg20-1 mutant; if the amplification product is 79 bp and The two-band type of 75 bp, the corn to be tested is a heterozygous genotype.
第二十五方面,本发明提供所述DNA分子标记、所述引物或所述检测试剂或试剂盒在玉米基因ZmABCG20分型中的应用。In a twenty-fifth aspect, the present invention provides the use of the DNA molecule marker, the primer or the detection reagent or kit in the classification of the maize gene ZmABCG20.
本发明提供的ZmABCG20基因优点如下:The advantages of the ZmABCG20 gene provided by the present invention are as follows:
1)首次发现ZmABCG20突变可造成玉米雄性不育表型,对于该基因的利用和功能研究,以及玉米雄性育性调控机制的研究具有重要意义。1) It was first discovered that the ZmABCG20 mutation can cause the male sterility phenotype of maize, which is of great significance for the study of the utilization and function of this gene and the regulation mechanism of male fertility in maize.
2)ZmABCG20突变只影响雄性育性,可造成雄性完全不育,但对雌雄育性和其它农艺性状没有影响,适用于杂交育种、制种和生产等产业化应用。2) ZmABCG20 mutation only affects male fertility, which can cause male complete sterility, but has no effect on male and female fertility and other agronomic traits, and is suitable for industrial application such as cross breeding, seed production and production.
3)ZmABCG20只在植物雄花幼穗中表达,时间和组织特异性强,其启动子可用于驱动任何基因在雄花幼穗中特异性表达。3) ZmABCG20 is only expressed in the shoots of male flowers, and has strong time and tissue specificity. Its promoter can be used to drive specific expression of any gene in the young flower spikes.
本发明提供的突变体zmabcg20-1优点如下:The advantages of the mutant zmabcg20-1 provided by the present invention are as follows:
1)zmabcg20-1是首次报道的ZmABCG20突变体,对于该基因的利用和功能研究具有重要意义。1) zmabcg20-1 is the first reported ZmABCG20 mutant, which is of great significance for the utilization and function of this gene.
2)该突变体只影响雄性育性,造成雄性完全不育,但对雌雄育性和其它农艺性状没有影响。2) The mutant only affects male fertility, resulting in male complete infertility, but has no effect on male and female fertility and other agronomic traits.
3)该突变体为4碱基缺失引起的基因删除突变,不会有育性恢复的潜在风险,也不会有遗传不稳定的风险。3) The mutant is a gene deletion mutation caused by a 4 base deletion, and there is no potential risk of fertility recovery, and there is no risk of genetic instability.
4)该突变体为基因内4碱基删除,不会影响ZmABCG20两侧相邻基因的功能。4) The mutant is a 4-base deletion in the gene and does not affect the function of adjacent genes on both sides of ZmABCG20.
5)该突变体为4碱基删除突变,可设计Indel标记,用普通PCR和电泳即可完成高通量检测;同时也可设计为基因芯片检测标记。5) The mutant is a 4 base deletion mutation, and the Indel label can be designed to perform high-throughput detection by ordinary PCR and electrophoresis; and can also be designed as a gene chip detection marker.
6)该突变体遗传背景为中国当代主栽品种,可直接用于中国玉米品 种的选育,无需漫长的改良过程。6) The genetic background of the mutant is a contemporary Chinese main variety, which can be directly used for the selection of Chinese corn varieties without a long process of improvement.
图1为本发明实施例2中突变体野生型和zmabcg20-1的雄花以及zmabcg20-1的果穗。BRIEF DESCRIPTION OF THE DRAWINGS Fig. 1 is a view showing the mutant wild type and the male flower of zmabcg20-1 and the ear of zmabcg20-1 in Example 2 of the present invention.
图2为本发明实施例3中野生型和突变体zmabcg20-1的花药以及花粉I 2-KI染色结果。 Figure 2 is a graph showing the results of anther and pollen I 2 -KI staining of wild type and mutant zmabcg20-1 in Example 3 of the present invention.
图3为本发明实施例7在京科糯2000的不同时期幼穗及不同组织中ZmABCG20基因荧光实时定量PCR结果。3 is a real-time quantitative PCR result of ZmABCG20 gene expression in young ears and different tissues of Jingkejing 2000 in Example 7 of the present invention.
图4为本发明实施例6和8中鉴定的ZmABCG20基因结构和zmabcg20-1的突变位点示意图。Figure 4 is a schematic diagram showing the ZmABCG20 gene structure and the mutation site of zmabcg20-1 identified in Examples 6 and 8 of the present invention.
图5为本发明实施例9中zmabcg20-1突变体开放授粉后自交F 2后代中的突变体和野生型植株ZmABCG20基因分子标记鉴定的电泳结果。 5 is an electrophoresis result of molecular marker identification of a mutant of a self-crossing F 2 progeny and a wild type plant ZmABCG20 gene after open pollination of the zmabcg20-1 mutant in Example 9 of the present invention.
图6为本发明实施例10中构建ZmABCG20基因的RNAi载体的流程示意图。Figure 6 is a schematic flow chart showing the construction of the RNAi vector of the ZmABCG20 gene in Example 10 of the present invention.
图7为本发明实施例11中对照与RNAi雄性不育株的花粉碘染结果。Figure 7 is a result of pollen iodine staining of control and RNAi male sterile plants in Example 11 of the present invention.
图8为本发明实施例13中所述的zmabcg20-1不育基因杂交转育的技术路线图。Figure 8 is a technical route diagram for the hybridization of the zmabcg20-1 sterile gene described in Example 13 of the present invention.
以下实施例用于说明本发明,但不用来限制本发明的范围。若未特别指明,实施例均按照常规实验条件,如Sambrook等分子克隆实验手册(Sambrook J&Russell DW,Molecular Cloning:a Laboratory Manual,2001),或按照制造厂商说明书建议的条件。The following examples are intended to illustrate the invention but are not intended to limit the scope of the invention. Unless otherwise indicated, the examples are based on routine experimental conditions, such as the Sambrook J&Russell DW, Molecular Cloning: a Laboratory Manual, 2001, or as suggested by the manufacturer's instructions.
实施例1 钴60辐射诱变突变体库Example 1 Cobalt 60 Radiation Mutagenesis Mutant Library
2015年9月,于长沙用钴60( 60Co)辐射京科糯2000种子(M 0代)3公斤,辐射剂量250Gy。辐射的种子于2015年10月种植于海南三亚市崖城区田间,分单株严格自交,收获M 1代种子。 In September 2015, in Changsha, cobalt 60 ( 60 Co) was used to irradiate Jingke 糯2000 seeds (M 0 generation) 3 kg, and the radiation dose was 250 Gy. The seeds of the radiation were planted in the field of Yacheng District, Sanya City, Hainan Province in October 2015. The individual plants were strictly selfed and the M 1 generation seeds were harvested.
选取M 1代种子5400个株系,每个株系种植50棵单株,于2016年2月种植于海南临高田间。在苗期、抽穗期、开花期、灌浆期等经过仔细观察田间性状,筛查株型、穗型、育性、产量等各种类型突变体,对各类型突变体单株收种保存。 5,400 strains of M 1 seed were selected, and 50 plants per plant were planted. In February 2016, they were planted in Lin Gaotian, Hainan. At the seedling stage, heading stage, flowering stage, and filling stage, the field traits were carefully observed, and various types of mutants such as plant type, panicle type, fertility and yield were screened, and each type of mutant was collected and preserved.
实施例2 M 2代种植与性状观察 Example 2 M 2 Generation Planting and Character Observation
在M 2代抽穗、开花期间,在田间对花药的形态进行观察,选取颜色浅白、形态小、花粉量小等表现异常的花药在显微镜下进一步镜检。在编号为3326的家系中发现9株育性异常的植株,不能正常散粉,但结实正常(图1)。该突变体花药比野生型瘪小,颜色浅黄,无可见花粉,但在营养生长、抽穗期、穗型均与野生型没有明显区别,被选作候选突变体材料进行下一步研究。根据最终鉴定的突变基因(参见实施例6、7、8),该突变体命名为zmabcg20-1。 During the heading and flowering period of M 2 generation, the anthers were observed in the field, and anthers with abnormal color, small shape and small amount of pollen were selected for further microscopic examination under the microscope. In the family numbered 3326, 9 plants with abnormal fertility were found, which could not be loosely powdered, but were firm and normal (Fig. 1). The mutant anther was smaller than the wild type, the color was light yellow, and there was no visible pollen. However, there was no significant difference between the vegetative growth, heading stage and panicle type and the wild type, which was selected as the candidate mutant material for further study. Based on the finally identified mutant gene (see Examples 6, 7, 8), the mutant was named zmabcg20-1.
实施例3 不育突变体花粉镜检和遗传分析Example 3 Pollen microscopy and genetic analysis of sterile mutants
通过碘染着色与不着色花粉比例,统计花粉育性。在体式显微镜下观察zmabcg20-1雄花形态,花药比野生型小,颜色较浅(图2)。田间采集开花期小花,用镊子取出花药,在碘-碘化钾溶液(0.6%KI,0.3%I 2,w/w)中轻轻挤压花药,滴在载玻片上,盖上盖玻片,在显微镜下观察花粉碘染情况并拍照。野生型花粉多而染成蓝黑色,而突变体则看不到花粉粒(图2)。 Pollen fertility was counted by iodine staining and non-coloring pollen ratio. The morphology of zmabcg20-1 male flowers was observed under a stereo microscope. The anthers were smaller than the wild type and the color was lighter (Fig. 2). In the field, flowering florets were collected, and the anthers were removed with tweezers. The anthers were gently squeezed in iodine-potassium iodide solution (0.6% KI, 0.3% I 2 , w/w), dropped on glass slides, and covered with coverslips. The pollen iodine staining was observed under a microscope and photographed. Wild-type pollen is mostly stained blue-black, while mutants do not see pollen grains (Fig. 2).
突变体开放授粉下可正常结实(图1),表明该突变体为雄性不育突变体,雌穗育性不受影响。收获zmabcg20-1开放授粉种子(F 1)并播种,抽穗后均可正常散粉,套袋自交可正常结实,单穗收获F 2种子。取一个单穗自交的F 2种子穗行播种,抽穗后鉴定育性,其中125株花粉正常碘染,38株无花粉,符合3:1分离(χ 2=0.30),表明该不育性状由单个隐性基因控制。 The mutant was normally robust under open pollination (Fig. 1), indicating that the mutant was a male sterile mutant and the fertility of the ear was not affected. The zmabcg20-1 open pollination seed (F 1 ) was harvested and sown. After the heading, the powder could be normally scattered. The bagging self-crossing could be normal and the F 2 seeds were harvested from the single ear. A single-eared F 2 seed ear was sown, and the fertility was identified after heading. Among them, 125 pollen were normal iodine dyed and 38 were pollen-free, which was consistent with 3:1 separation (χ 2 =0.30), indicating the sterility trait. Controlled by a single recessive gene.
实施例4 叶片采样与DNA提取Example 4 Leaf Sampling and DNA Extraction
本项研究采用CTAB法提取玉米叶片DNA,具体方法如下:称取约0.1g叶片,放入离心管,加入600μL CTAB提取缓冲液,5μL RNase A,震荡分散,65℃水浴0.5hr,其间轻摇2-3次;加入等体积氯仿/Tris-饱和酚(1:1,v/v),混匀,轻摇10min;4℃10000rpm离心20min;转移上清至新管,加入1/10体积的3M乙酸钠(pH值5.2)、0.6-1倍体积的冷异丙醇;轻摇混匀,至絮状沉淀出现;4℃10000rpm离心10min;弃去上清,用体积百分含量70%乙醇洗沉淀2次;风干,加入50μL 1×TE溶解沉淀,-20℃保存。用Nanodrop2000检测DNA浓度,稀释至10ng/L用作PCR模板。In this study, CTAB method was used to extract corn leaf DNA. The specific method was as follows: weigh about 0.1g of leaves, put into a centrifuge tube, add 600μL CTAB extraction buffer, 5μL RNase A, shake and disperse, and circulate at 65°C for 0.5hr. 2-3 times; add equal volume of chloroform / Tris-saturated phenol (1:1, v / v), mix, gently shake for 10min; centrifuge at 10,000 rpm for 20min at 4 ° C; transfer the supernatant to a new tube, add 1/10 volume 3M sodium acetate (pH 5.2), 0.6-1 volume of cold isopropanol; lightly shake and mix until flocculation occurs; centrifuge at 10,000 rpm for 10 min at 4 ° C; discard the supernatant, use 70% by volume of ethanol The precipitate was washed twice; air-dried, 50 μL of 1×TE was added to dissolve the precipitate, and stored at -20 °C. The DNA concentration was measured with Nanodrop 2000 and diluted to 10 ng/L for use as a PCR template.
实施例5 雄性不育候选基因染色体初步定位Example 5 Preliminary Positioning of Male Sterility Candidate Gene Chromosomes
根据IBM2 2008遗传图谱(www.maizegdb.org)筛选出在玉米各染色体 上均匀分布的SSR和Indel标记,筛选出在京科糯2000亲本间存在多态的标记,对京科糯2000和M 2中的9株zmabcg20-1进行基因型鉴定。PCR程序为PCR反应体系为:1μL 10×反应缓冲液,0.25μL dNTP,0.25μL正向引物和0.25μL反向引物,0.5U Taq酶,1μL 10ng/μL模板DNA,加超纯水将总体积补至10μL。PCR反应程序为:94-98℃变性1-3min,然后执行以下循环:95℃变性20s,53-58℃复性20s,72℃延伸30s,30-40个循环。 The genetic map IBM2 2008 (www.maizegdb.org) and screened Indel SSR markers on each chromosome maize uniform distribution, selected polymorphic marker is present between the 2000 Beijing Branch waxy parent of Beijing Branch Waxy and M 2 in 2000 Nine strains of zmabcg20-1 were genotyped. The PCR procedure consists of 1 μL of 10× reaction buffer, 0.25 μL of dNTP, 0.25 μL of forward primer and 0.25 μL of reverse primer, 0.5 U of Taq enzyme, 1 μL of 10 ng/μL of template DNA, and total volume of ultrapure water. Make up to 10μL. The PCR reaction procedure was: denaturation at 94-98 ° C for 1-3 min, and then the following cycles were performed: denaturation at 95 ° C for 20 s, renaturation at 53-58 ° C for 20 s, extension at 72 ° C for 30 s, 30-40 cycles.
反应产物在6%聚丙烯酰胺凝胶上进行电泳分离。聚丙烯酰胺凝胶电泳方法如下:(1)聚丙烯酰胺胶的配制:6%PA胶80mL,10%过硫酸胺250μL(冬天)/125μL(夏天),四甲基乙二胺(TEMED)80μL。摇匀后灌胶。用洗涤剂把玻璃板反复擦洗干净,用酒精擦净、晾干。在通风橱中将凹板涂上2%的Repel Silane后,再用酒精擦净、干燥,将另一块平板涂上0.5%的Bingding Silane 1.5mL(在1.5ml离心管中加入7.5μL Binding Silane和7.5μL冰醋酸,补足95%乙醇至1.5mL)。操作过程中,防止两块玻璃板相互污染,彻底干燥后再进行玻璃板组装、灌胶。(2)预电泳:待胶凝固后,取出梳子,洗掉上边凝胶尤其注意接缝处定要洗净。先在电泳槽下槽(阴极)装入1×TBE的电极缓冲液,将聚合的凝胶板装在电泳槽内,在上槽中注入0.5×TBE的电极缓冲液。恒定功率40W-65W,预电泳约30min。用吸管清除胶面上沉淀的尿素和气泡,插入梳子。(3)电泳:扩增产物中加入5μl 5×Loading Buffer混合后95℃变性5分钟,立刻转移到冰上冷却,吸取1.5-3μl加入上样孔;恒定功率40W-65W进行电泳,至溴酚蓝到达电泳槽底部结束。视SSR扩增产物分子量大小及差异带型的可辨程度调整电泳时间。(4)银染显色,将带胶的一块玻璃板放入10%的冰乙酸固定液中,65r/min振荡约30min,直至二甲苯腈全部脱色;蒸馏水冲洗2次,每次5min;将冲洗后的胶板放入新配制的染色液(2L水中加入2g硝酸银、3mL37%甲醛)中65r/min摇动30min;将染色后的胶板放入蒸馏水冲洗5s,立即拿出进行显影;将胶板快速转移到4℃预冷的显影液(2L水中加入30g氢氧化钠,10ml 37%甲醛)轻轻摇动至带纹出现;将胶板置于10%的冰乙酸固定液中至无气泡产生为止;用蒸馏水冲洗2次,每次2min;室温下自然干燥后,拍照保存图像。The reaction product was electrophoretically separated on a 6% polyacrylamide gel. The polyacrylamide gel electrophoresis method is as follows: (1) Preparation of polyacrylamide gel: 6% PA gel 80 mL, 10% ammonium persulfate 250 μL (winter) / 125 μL (summer), tetramethylethylenediamine (TEMED) 80 μL . Shake well and mix. Wipe the glass plate repeatedly with detergent, wipe it with alcohol, and dry it. After applying the 2% Repel Silane to the gravure in a fume hood, wipe it with alcohol, dry it, and apply another plate to 0.5% Bingding Silane 1.5 mL (add 7.5 μL Binding Silane to a 1.5 ml centrifuge tube and 7.5 μL of glacial acetic acid to make up 95% ethanol to 1.5 mL). During the operation, the two glass plates are prevented from being polluted by each other, and after thorough drying, the glass plates are assembled and filled. (2) Pre-electrophoresis: After the gel is solidified, remove the comb and wash off the upper gel, especially pay attention to the seam to be cleaned. First, a 1×TBE electrode buffer was placed in the lower tank (cathode) of the electrophoresis tank, and the polymerized gel plate was placed in an electrophoresis tank, and 0.5×TBE electrode buffer was injected into the upper tank. Constant power 40W-65W, pre-electrophoresis for about 30min. Use a pipette to remove the urea and bubbles deposited on the rubber surface and insert the comb. (3) Electrophoresis:
在鉴定标记中,位于9号染色体的Indel标记IDP8150(正向引物:5’-TGCTCGCAGGAATAGAAAGC-3’;反向引物: 5’-GACGCAATCGACAGAGTACG-3’),在京科糯2000中的扩增带为杂合带型,而9株zmabcg20-1均为相同的纯合带型,表明控制育性的突变基因与IDP8150连锁,位于9号染色体。对已克隆的植物雄性育性控制基因分析,发现玉米的Ms45(GRMZM2G307906),拟南芥AtABCG26和水稻OsABCG15的直系同源基因ZmABCG20(GRMZM2G076526/Zm00001d046537)均位于9号染色体。我们将这两个基因作为目标基因进行测序分析。In the identification marker, the Indel marker IDP8150 located on chromosome 9 (forward primer: 5'-TGCTCGCAGGAATAGAAAGC-3'; reverse primer: 5'-GACGCAATCGACAGAGTACG-3'), the amplification band in Jingkejing 2000 is heterozygous The conjugated type, and 9 strains of zmabcg20-1 are all homozygous, indicating that the mutated gene controlling fertility is linked to IDP8150 and is located on chromosome 9. Analysis of the male fertility control genes of the cloned plants revealed that the maize Ms45 (GRMZM2G307906), the Arabidopsis AtABCG26 and the rice OsABCG15 ortholog ZmABCG20 (GRMZM2G076526/Zm00001d046537) were located on chromosome 9. We used these two genes as target genes for sequencing analysis.
实施例6 候选基因测序Example 6 Candidate Gene Sequencing
根据玉米自交系B73的Ms45和ZmABCG20基因序列设计引物,扩增野生型京科糯2000和zmabcg20-1的基因组DNA,扩增产物测序后拼接出完整序列。用于扩增玉米ZmABCG20的引物对为ZmABCG20_1~3,用于扩增Ms45的引物对为Ms45_1~Ms45_4;序列见表1:The primers were designed according to the Ms45 and ZmABCG20 gene sequences of maize inbred line B73, and the genomic DNA of wild type Jingke 糯2000 and zmabcg20-1 were amplified. The amplified products were sequenced and spliced out the complete sequence. The primer pair for amplifying maize ZmABCG20 is ZmABCG20_1~3, and the primer pair for amplifying Ms45 is Ms45_1~Ms45_4; the sequence is shown in Table 1:
表1用于扩增玉米ZmABCG20和Ms45的引物对序列Table 1 Primer pair sequences for amplification of maize ZmABCG20 and Ms45
PCR反应体系为:1μL 10×反应缓冲液,0.25μL dNTP,0.25μL正向引物和0.25μL反向引物,0.5U Taq酶,1μL 10ng/μL模板DNA,加超纯水将总体积补至10μL。PCR反应程序为:94-98℃变性1-3min,然后执行以下循环:95℃变性20s,53-58℃复性20s,72℃延伸30s,30-40个循环。循环结束后72℃补充延伸3-10min,结束反应。配置1.5%琼脂糖凝胶,在5V/cm电场下电泳30min;采用市面DNA凝胶回收试剂盒回收PCR产物。The PCR reaction system consisted of 1 μL of 10× reaction buffer, 0.25 μL of dNTP, 0.25 μL of forward primer and 0.25 μL of reverse primer, 0.5 U of Taq enzyme, and 1 μL of 10 ng/μL of template DNA, and the total volume was supplemented to 10 μL with ultrapure water. . The PCR reaction procedure was: denaturation at 94-98 ° C for 1-3 min, and then the following cycles were performed: denaturation at 95 ° C for 20 s, renaturation at 53-58 ° C for 20 s, extension at 72 ° C for 30 s, 30-40 cycles. After the end of the cycle, the extension was extended at 72 ° C for 3-10 min to terminate the reaction. A 1.5% agarose gel was placed and electrophoresed under an electric field of 5 V/cm for 30 min; the PCR product was recovered using a commercially available DNA gel recovery kit.
将回收所得野生型与突变体的PCR产物DNA采用ABI3730测序仪进行测序,测序引物分别使用正向引物与反向引物。使用常见DNA序列分析软件DNAman6.0对双向测序结果进行拼接。分析表明,突变体zmabcg20-1的Ms45基因序列与野生型京科糯2000完全相同,没有发生突变。突变体 zmabcg20-1的ZmABCG20基因全长核苷酸序列如SEQ ID NO:7所示,比京科糯2000缺失了4个碱基。The PCR product DNA of the wild type and mutant obtained was sequenced using an ABI3730 sequencer, and the sequencing primers used a forward primer and a reverse primer, respectively. The bidirectional sequencing results were spliced using the common DNA sequence analysis software DNAman6.0. The analysis showed that the Ms45 gene sequence of the mutant zmabcg20-1 was identical to the wild type Jingke 糯2000, and no mutation occurred. The full-length nucleotide sequence of the ZmABCG20 gene of the mutant zmabcg20-1 is shown in SEQ ID NO: 7, and is deleted by 4 bases from the genus 京2000.
ZmABCG20与水稻中的OsABCG15以及拟南芥中的AtABCG26为直系同源基因,而后两者突变体表型也表现为雄性不育,其中水稻突变体osabcg15也无成熟花粉。ZmABCG20 is an orthologous gene with OsABCG15 in rice and AtABCG26 in Arabidopsis, while the latter two mutant phenotypes also show male sterility, and the rice mutant osabcg15 also has no mature pollen.
实施例7 ZmABCG20表达的组织特异性Example 7 Tissue Specificity of ZmABCG20 Expression
选取从不同时期京科糯2000的花穗,时期从V7期(玉米雄穗开始成型)至V18期(玉米雄穗穗成熟)(How a Corn Plant Develops.Special Report No.48.Iowa State University of Science and Technology,Cooperative Extension Servce,Ames,Iowa.Reprinted 2/1996),以及幼根、茎、叶、雄花外颖、内颖和雌穗;液氮运输,-80℃保存;用TRIzol RNA提取试剂盒(Invitrogen,美国)分别提取上述组织RNA,立即用PrimeScript RT reagent试剂盒(TaKaRa,大连),按照操作说明将RNA反转录为cDNA。The flower spikes of Jingkejing 2000 from different periods were selected, from V7 (forming of corn tassels) to V18 (maize of tassel ears) (How a Corn Plant Develops. Special Report No. 48. Iowa State University of Science and Technology, Cooperative Extension Servce, Ames, Iowa. Reprinted 2/1996), and roots, stems, leaves, male flowers, gems, and ears; liquid nitrogen transport, storage at -80 ° C; extraction reagent with TRIzol RNA The above tissue RNA was extracted from the cassette (Invitrogen, USA), and the RNA was reverse-transcribed into cDNA using the PrimeScript RT reagent kit (TaKaRa, Dalian) according to the instructions.
荧光定量PCR采用PowerUp TM SYBR TM Green Master Mix(Thermo Fisher美国),用PikoReal 96荧光定量PCR仪(Thermo Fisher,美国)扩增和检测荧光。选择玉米Actin1基因作为内参基因,扩增引物为actinI-F和actinI-R(SEQ ID NO:15-16),用于ZmABCG20荧光定量的扩增引物为ABCG-2F和ABCG-2R(SEQ ID NO:17-18)。 Quantitative PCR using PowerUp TM SYBR TM Green Master Mix ( Thermo Fisher USA), amplification and detection of the fluorescence PikoReal 96 quantitative PCR instrument (Thermo Fisher, USA). The maize Actin1 gene was selected as the internal reference gene, the amplification primers were actinI-F and actinI-R (SEQ ID NO: 15-16), and the amplification primers for ZmABCG20 fluorescence quantification were ABCG-2F and ABCG-2R (SEQ ID NO). :17-18).
荧光定量PCR反应体系如下:SYBR Green Mix 5μL,Forward Primer0.5μL,Reverse Primer 0.5μL,cDNA 1μL,超纯水3μL。PCR反应程序为:95℃变性5min;95℃变性15s,60℃退火-延伸1min,循环40次;60℃30s。溶解曲线起始温度60℃;最终温度95℃;保持时间1s;温度增量0.2℃。The real-time PCR reaction system was as follows:
荧光实时定量PCR结果见图3,ZmABCG20基因仅在V10-V15时期的雄花幼穗中表达,其中在V12期表达急剧升高,其他时期仅有微量表达;在根、茎、叶、雌穗、以及雄花的内颖和外颖等其他组织均未检测到ZmABCG20的表达。V12期对应花粉单核期,其外壁正在形成,这一表达组织和时期与其拟南芥和水稻同源基因的功能是一致的。The results of real-time quantitative PCR were shown in Figure 3. The ZmABCG20 gene was expressed only in the spikelets of V10-V15, and the expression was sharply increased in V12, only slightly expressed in other periods; in roots, stems, leaves, ears, The expression of ZmABCG20 was not detected in other tissues such as Nei Ying and Wai Ying. The V12 phase corresponds to the pollen mononuclear phase, and its outer wall is forming. This expression organization and period are consistent with the functions of Arabidopsis and rice homologous genes.
实施例8 ZmABCG20转录本序列分析Example 8 Sequence Analysis of ZmABCG20 Transcript
在Gramene数据库中,ZmABCG20基因有两个基因注释号,分别为GRMZM2G076526和Zm00001d046537,共有8个预测的转录本。为确定该基因的编码区,用覆盖ZmABCG20编码区全长的引物对ZmABCG20_T1~ T4(序列见表1)扩增从京科糯2000雄花幼穗中获得的cDNA扩增,产物按实施例6的方法分离测序。测序结果ZmABCG20编码区如SEQ ID NO:5所示,与GRMZM2G076526-T001(SEQ ID NO:2)一致。In the Gramene database, the ZmABCG20 gene has two gene annotation numbers, GRMZM2G076526 and Zm00001d046537, for a total of 8 predicted transcripts. In order to determine the coding region of the gene, cDNA amplification obtained from the spikes of Kyosuke 2000 male flowers was amplified with primers covering the full length of the ZmABCG20 coding region, ZmABCG20_T1 to T4 (see Table 1 for the sequence), and the product was as in Example 6. The method was isolated and sequenced. Sequencing Results The ZmABCG20 coding region is set forth in SEQ ID NO: 5 and is identical to GRMZM2G076526-T001 (SEQ ID NO: 2).
比对突变体基因组、京科糯2000基因组和cDNA序列,发现zmabcg20-1在编码区第246位碱基,即基因组序列中起始密码子起第326位碱基后,位于第二个外显子的4个碱基TGCA缺失,导致翻译的蛋白质中第82个氨基酸残基后发生移码突变,翻译至第100个氨基酸残基后提前终止翻译。突变基因zmabcg20-1的编码区序列如SEQ ID NO:8所示,编码的蛋白序列如SEQ ID NO:9所示。B73的ZmABCG20基因组序列、编码区序列及蛋白质序列分别见SEQ ID NO:1、SEQ ID NO:2和SEQ ID NO:3;京科糯2000的ZmABCG20基因组序列、编码区序列及蛋白质序列分别见SEQ ID NO:4、SEQ ID NO:5和SEQ ID NO:6。ZmABCG20基因结构及zmabcg20-1突变位点见图4。Comparing the mutant genome, the Jingke 糯2000 genome and cDNA sequence, it was found that zmabcg20-1 is located at the 246th base of the coding region, ie, the 326th base of the start codon in the genomic sequence, and is located in the second explicit The deletion of the 4 base TGCA of the subunit results in a frameshift mutation after the 82nd amino acid residue in the translated protein, and the translation is terminated early after translation to the 100th amino acid residue. The coding region sequence of the mutant gene zmabcg20-1 is shown in SEQ ID NO: 8, and the encoded protein sequence is shown in SEQ ID NO: 9. The ZmABCG20 genomic sequence, coding region sequence and protein sequence of B73 are shown in SEQ ID NO: 1, SEQ ID NO: 2 and SEQ ID NO: 3, respectively; the ZmABCG20 genomic sequence, coding region sequence and protein sequence of Jingke 糯 2000 are shown in SEQ, respectively. ID NO: 4, SEQ ID NO: 5 and SEQ ID NO: 6. The ZmABCG20 gene structure and the zmabcg20-1 mutation site are shown in Figure 4.
实施例9 功能标记鉴定F 2群体ZmABCG20基因型 Example 9 Functional marker identification of F 2 population ZmABCG20 genotype
根据实施例6中得到的突变位点两侧的序列设计一对基因特异引物:正向引物3326_F1,其核苷酸序列如SEQ ID NO:10所示;反向引物3326_R1,其核苷酸序列如SEQ ID NO:11所示。A pair of gene-specific primers were designed according to the sequence flanking the mutation site obtained in Example 6: forward primer 3326_F1, nucleotide sequence shown as SEQ ID NO: 10; reverse primer 3326_R1, nucleotide sequence thereof As shown in SEQ ID NO:11.
用上述引物对扩增出的产物大小如果为79bp,则标志着该待测植物基因型为野生型;如果扩增产物大小为75bp,则标志着该待测植株为zmabcg20-1突变体;如果扩增产物大小为79bp和75bp两条带型,则标志着该待测植株ZmABCG20基因为野生型和zmabcg20-1突变体的杂合基因型。If the size of the product amplified by the above primer pair is 79 bp, it indicates that the genotype of the plant to be tested is wild type; if the size of the amplified product is 75 bp, it indicates that the plant to be tested is a zmabcg20-1 mutant; The size of the amplified product was 79 bp and 75 bp, indicating that the ZmABCG20 gene of the plant to be tested was a heterozygous genotype of the wild type and zmabcg20-1 mutant.
在实施例3中获得的F 2株系中,随机选取野生型和突变体表型的植株,提取叶片DNA,与京科糯2000基因组DNA一起,分别用上述引物对进行扩增。PCR反应体系为:1μL 10×反应缓冲液,0.25μL dNTP,0.25μL正向引物和0.25μL反向引物,0.5U Taq酶,1μL 10ng/μL模板DNA,加超纯水将总体积补至10μL。PCR反应程序为:94-98℃变性1-3min,然后执行以下循环:95℃变性20s,53-58℃复性20s,72℃延伸30s,30-40个循环。扩增产物用6%聚丙烯酰胺凝胶电泳分离,40W恒功率电场下电泳1hr,硝酸银染色后拍照记录电泳图。 Among the F 2 strains obtained in Example 3, wild-type and mutant phenotype plants were randomly selected, and leaf DNA was extracted and amplified with the above primer pairs together with the Jingke 糯2000 genomic DNA. The PCR reaction system consisted of 1 μL of 10× reaction buffer, 0.25 μL of dNTP, 0.25 μL of forward primer and 0.25 μL of reverse primer, 0.5 U of Taq enzyme, and 1 μL of 10 ng/μL of template DNA, and the total volume was supplemented to 10 μL with ultrapure water. . The PCR reaction procedure was: denaturation at 94-98 ° C for 1-3 min, and then the following cycles were performed: denaturation at 95 ° C for 20 s, renaturation at 53-58 ° C for 20 s, extension at 72 ° C for 30 s, 30-40 cycles. The amplified product was separated by 6% polyacrylamide gel electrophoresis, and electrophoresed under a 40 W constant power electric field for 1 hr. After silver nitrate staining, the electropherogram was photographed.
结果见图5,野生型对照的扩增产物大小为79bp;F 2穗行中不育株的扩增产物大小均为75bp;所有的可育株扩增产物大小为79bp,或79bp+75bp杂合带型,而没有纯合75bp带型。这一结果表明实施例6中所述突变位 点与隐性核雄性不育基因是共分离的。 The results are shown in Figure 5. The size of the amplified product of the wild type control is 79 bp; the size of the amplified product of the sterile line in the F 2 spike line is 75 bp; the size of the amplified product of all fertile plants is 79 bp, or 79 bp + 75 bp. Banded type, but not homozygous 75bp band type. This result indicates that the mutation site described in Example 6 is co-segregating with the recessive nuclear male sterility gene.
实施例10 ZmABCG20的RNAi载体构建Example 10 Construction of RNAi Vector of ZmABCG20
为验证ZmABCG20基因功能,本实施例构建了该基因的RNAi载体。载体构建过程如图6所示,具体方法如下:To verify the function of the ZmABCG20 gene, this example constructs an RNAi vector of the gene. The carrier construction process is shown in Figure 6, and the specific method is as follows:
1、选择ZmABCG20中高特异性cDNA片段SEQ ID NO:23作为RNAi靶序列。从实施例7得到的V12期cDNA中,用引物对17N19-F1(SEQ ID NO:21)和17N19-R1(SEQ ID NO:22)扩增出RNAi茎环结构的正向片段17N19-1;用引物对17N19-F2(SEQ ID NO:19)和17N19-R2(SEQ ID NO:20)扩增出RNAi茎环结构的反向片段17N19-2。1. The high specificity cDNA fragment SEQ ID NO: 23 in ZmABCG20 was selected as the RNAi target sequence. From the V12 phase cDNA obtained in Example 7, a forward fragment 17N19-1 of the RNAi stem-loop structure was amplified with primer pairs 17N19-F1 (SEQ ID NO: 21) and 17N19-R1 (SEQ ID NO: 22); The reverse fragment 17N19-2 of the RNAi stem-loop structure was amplified with primer pairs 17N19-F2 (SEQ ID NO: 19) and 17N19-R2 (SEQ ID NO: 20).
2、中间载体采用pBSK-RTM(成都皓宸生物科技有限公司提供,载体pBSK-RTM由质粒pBSK改造而来。其含有序列如SEQ ID NO:24所示的拟南芥RTM1基因的内含子,如图6所示,该内含子左侧为SacI和NotI酶切位点,右侧为XbaI和BamHI酶切位点)。采用SacI和NotI双酶切pBSK-RTM和正向片段,连接转化大肠杆菌,挑取8个转化子进行PCR验证,挑取两个阳性转化子提取质粒后送测序验证,得到pBSK-17N19-1载体。2. The intermediate vector was provided by pBSK-RTM (provided by Chengdu Biotech Co., Ltd., and the vector pBSK-RTM was engineered from plasmid pBSK. It contains the intron of the Arabidopsis RTM1 gene as shown in SEQ ID NO: 24. As shown in Figure 6, the left side of the intron is the SacI and NotI restriction sites, and the right side is the XbaI and BamHI restriction sites). The pBSK-RTM and forward fragments were digested with SacI and NotI, ligated into E. coli, and 8 transformants were picked for PCR verification. Two positive transformants were picked and plasmids were extracted and sequenced to obtain pBSK-17N19-1 vector. .
3、以pBSK-17N19-1为模板进行17N19基因反向片段17N19-2的克隆。3. The 17N19 gene reverse fragment 17N19-2 was cloned using pBSK-17N19-1 as a template.
采用XbaI和BamHI双酶切pBSK-17N19-1和反向片段17N19-2,连接转化大肠杆菌,挑取8个转化子进行PCR验证。挑取1个阳性转化子提取质粒后测序,证实为目的载体pBSK-17N19R。The pBSK-17N19-1 and the reverse fragment 17N19-2 were digested with XbaI and BamHI, ligated into E. coli, and 8 transformants were picked for PCR verification. A positive transformant was picked and the plasmid was extracted and sequenced, and confirmed to be the target vector pBSK-17N19R.
用BamHI和SacI双酶切pBSK-17N19R载体,回收包含正向片段+RTM+反向片段的目标片段;同时用BamHI和SacI双酶切pCambia3301ky质粒(成都皓宸生物科技有限公司提供,在pCambia3301质粒的多克隆位点上游插入了一个35S启动子得到pCambia3301ky)。连接目标片段和pCambia3301ky,转化大肠杆菌。挑取1个PCR阳性的转化子提取质粒,用BamHI和SacI双酶切,电泳显示(正向片段+RTM+反向片段)大片段和pCambia3301ky质粒骨架条带,结果表明目标片段正确连接到pCambia3301ky多克隆载体中,为载体pCambia3301-17N19R,RNAi载体构建完成。The pBSK-17N19R vector was digested with BamHI and SacI, and the target fragment containing the forward fragment + RTM+ inverted fragment was recovered. The pCambia3301ky plasmid was digested with BamHI and SacI (provided by Chengdu Tuo Biotechnology Co., Ltd., in pCambia3301 plasmid). A 35S promoter was inserted upstream of the multiple cloning site to obtain pCambia3301ky). The target fragment and pCambia3301ky were ligated to transform E. coli. A PCR-positive transformant was picked and extracted with BamHI and SacI. The large fragment of the positive fragment (forward fragment + RTM + reverse fragment) and the pCambia3301ky plasmid skeleton band were electrophoresed. The results showed that the target fragment was correctly ligated to pCambia3301ky. In the cloning vector, the vector pCambia3301-17N19R, the RNAi vector was constructed.
实施例11 遗传转化与转化植株表型鉴定Example 11 Genetic Transformation and Phenotypic Identification of Transformed Plants
MS和N6培养基成分如下:The composition of MS and N6 medium is as follows:
其余步骤所用培养基如下:The medium used in the remaining steps is as follows:
YEB培养液:5.0g/L酵母,10.0g/L蛋白胨,5.0g/L NaCl,50.0mg/L卡那霉素和25.0mg/L利福平,pH6.8;YEB culture solution: 5.0 g/L yeast, 10.0 g/L peptone, 5.0 g/L NaCl, 50.0 mg/L kanamycin and 25.0 mg/L rifampicin, pH 6.8;
侵染液:N6基本培养基中加入2,4-D l.0mg/L,L-脯氨酸700mg/L,水解酪蛋白100mg/L,肌醇120mg/L,蔗糖68g/L,葡萄糖36g/L,乙酰丁香酮100μmol/L,pH5.2;Infecting solution: 2,4-D l.0mg/L, L-valine 700mg/L, hydrolyzed casein 100mg/L, inositol 120mg/L, sucrose 68g/L, glucose 36g / L, acetosyringone 100 μmol / L, pH 5.2;
共培养基:N6基本培养基,添加脯氨酸1.38g/L,水解酪蛋白500mg/L,肌醇120mg/L,2,4-D 2.0mg/L,琼脂0.7%,蔗糖3%,乙酰丁香酮100μmol/L,半胱氨酸200mg/L,AgNO 3 0.85mg/L,pH6.0; Co-culture medium: N6 basic medium, adding 1.38 g/L of proline, 500 mg/L of hydrolyzed casein, 120 mg/L of inositol, 2,4-D 2.0 mg/L, 0.7% of agar, 3% of sucrose, acetyl Syringone 100μmol/L, cysteine 200mg/L, AgNO 3 0.85mg/L, pH6.0;
恢复培养基:N6基本培养基中,添加脯氨酸1.38g/L,水解酪蛋白500mg/L,肌醇120mg/L,2,4-D 2.0mg/L,琼脂0.7%,蔗糖3%,AgNO 3 0.85mg/L,头孢霉素400mg/L,pH5.8; Recovery medium: N6 basic medium, adding 1.38g/L of proline, 500mg/L of casein, 120mg/L of inositol, 2,4-D 2.0mg/L, 0.7% of agar, 3% of sucrose, AgNO 3 0.85mg / L, cephalosporin 400mg / L, pH 5.8;
第一轮筛选培养基:N6基本培养基中,添加2,4-D l.0mg/L,L-脯氨酸700mg/L,水解酪蛋白100mg/L,甘露醇20g/L,肌醇120mg/L,琼脂0.7%,蔗糖3%,头孢霉素400mg/L,AgNO
3 0.85mg/L,双丙氨膦0.3mg/L,pH5.8;
The first round of screening medium: 2,4-D l.0mg / L, L-valine 700mg / L, hydrolyzed casein 100mg / L, mannitol 20g / L, inositol 120mg /L, agar 0.7%, sucrose 3%,
第二轮筛选培养基:在第一轮筛选培养基的基础上,将双丙氨膦浓度提高至0.6mg/L;The second round of screening medium: based on the first round of screening medium, the concentration of bialaphos was increased to 0.6 mg / L;
分化培养基:基本培养基MS中加入1mg/L激动素,100mg/L水解酪蛋白,200mg/L头孢霉素,0.7%琼脂,3%蔗糖,pH5.8;Differentiation medium: 1 mg/L kinetin was added to the basic medium MS, 100 mg/L hydrolyzed casein, 200 mg/L cephalosporin, 0.7% agar, 3% sucrose, pH 5.8;
生根培养基:1/2MS基本培养基中加入100mg/L水解酪蛋白,700mg/L L-脯氨酸,0.2mg/L IBA,0.7%琼脂,3%蔗糖,pH5.8。Rooting medium: 1/2 MS basic medium was added with 100 mg/L hydrolyzed casein, 700 mg/L L-valine, 0.2 mg/L IBA, 0.7% agar, 3% sucrose, pH 5.8.
按照以下步骤进行遗传转化与再生植株获得:Follow the steps below to genetically transform and regenerate plants:
1)侵染材料的准备:取玉米自交系B104自交授粉后10-13d玉米果穗,挑取幼胚,用75%酒精浸泡15s,2.5%次氯酸钠浸泡消毒10min,蒸馏水浸洗3-5次。1) Preparation of infecting materials: Take corn inbred line B104 self-pollination 10-13d corn ear, pick young embryos, soak for 15s with 75% alcohol, soak for 2 minutes with 2.5% sodium hypochlorite, 3-5 times with distilled water .
2)浸染幼胚:从平板上挑取基因工程农杆菌的单菌落接种于YEB培养液中,在28℃、220rpm振荡培养20h-36h;当细菌达到对数生长期时,4℃、3000rpm离心10min,离心收集菌体,用侵染液重悬至OD≈0.5,即可用于侵染。将挑取好的150个幼胚用浸染液浸5min-10min,用滤纸轻轻吸干浸染液。2) Dyeing young embryos: Single colonies of genetically engineered Agrobacterium were picked from the plate and inoculated in YEB medium, cultured at 28 ° C, 220 rpm for 20 h - 36 h; when the bacteria reached logarithmic growth phase, centrifuged at 4 ° C, 3000 rpm After 10 min, the cells were collected by centrifugation and resuspended to OD ≈ 0.5 with the infecting solution to be used for infection. Immerse the 150 young embryos with the dip solution for 5 min - 10 min, and gently blot the dip solution with filter paper.
3)共培养和恢复培养:将完成浸染的幼胚转入共培养基上,22℃暗培养3d后,转移到恢复培养基上,28℃暗培养7d。3) Co-cultivation and recovery culture: The immature embryos that had been digested were transferred to a common medium, and cultured at 22 ° C for 3 days, transferred to a recovery medium, and cultured at 28 ° C for 7 days.
4)筛选:将按步骤3)处理后获得的愈伤组织转到筛选培养基上28℃暗培养,筛选两轮,每轮3周。4) Screening: The callus obtained after the step 3) treatment was transferred to a screening medium at 28 ° C for dark culture, and two rounds were screened for 3 weeks each.
5)分化、生根:将筛选出的抗性愈伤组织转到分化培养基上25℃暗培养7d;再在25℃,16h光照(光照强度2000lux)-8h黑暗交替循环条件下培养,待苗长到5cm左右的长度时候转到生根培养基上,28℃光照培养15d。5) Differentiation and rooting: the selected resistant calli were transferred to the differentiation medium and cultured at 25 ° C for 7 days; then cultured at 25 ° C, 16 h light (light intensity 2000 lux) - 8 h dark alternating cycle, wait for seedling When the length is about 5 cm, it is transferred to the rooting medium and cultured at 28 ° C for 15 days.
6)炼苗移栽:将生根培养后的苗移栽到装有营养土的小花盆里,28℃光照培养10d;将幼苗移栽到温室(自然光照,日温32℃,夜温28℃)中培养。6) Refining seedling transplanting: transplanting the seedlings after rooting cultivation into small pots filled with nutrient soil, cultivating for 10 days at 28 °C; transplanting the seedlings to the greenhouse (natural light, daily temperature 32 ° C, night temperature 28 Culture in °C).
将经过上述步骤移栽的幼苗用引物PCR鉴定,确认5株为转化阳性株,携带有实施例9设计的ZmABCG20RNAi片段。The seedlings transplanted through the above steps were identified by primer PCR, and it was confirmed that 5 strains were transform-positive strains, and the ZmABCG20 RNAi fragment designed in Example 9 was carried.
转化植株开花时,取对照与阳性转化植株的花药,用实施例3中的碘染方法鉴定花粉育性。结果如图7所示,野生型自交系B104花粉正常可育,而一株编号R02的转化植株表现为雄性不育,没有花粉,与zmabcg20-1突变体表型一致。这一结果表明,敲除ZmABCG20确实会引起雄性不育。When the transformed plants were flowered, the anthers of the control and positive transformed plants were taken, and the pollen fertility was identified by the iodine dyeing method in Example 3. As a result, as shown in Fig. 7, the wild type inbred line B104 pollen was normally fertile, and one transformed plant numbered R02 showed male sterility, no pollen, and was consistent with the zmabcg20-1 mutant phenotype. This result indicates that knocking out ZmABCG20 does cause male sterility.
结合实施例1-10的结果,zmabcg20-1突变体表型、突变基因与拟南芥和水稻中ZmABCG20同源基因突变体一致;ZmABCG20基因在玉米雄花幼穗中特异表达,而在其他时期和组织均不表达;不育表型与zmabcg20-1突 变基因共分离;敲除ZmABCG20基因可导致与zmabcg20-1一致的雄性不育表型。上述结果证明:ZmABCG20是玉米雄性育性发育的必须基因;其功能缺失可导致玉米雄性不育表型;zmabcg20-1突变体的雄性不育表型是由实施例6中所述的ZmABCG20基因发生点突变造成的。In combination with the results of Examples 1-10, the zmabcg20-1 mutant phenotype and mutant gene were identical to the ZmABCG20 homologous gene mutants in Arabidopsis and rice; the ZmABCG20 gene was specifically expressed in the young male spikelets, while in other periods and None of the tissues were expressed; the sterile phenotype was co-segregated with the zmabcg20-1 mutant gene; knocking out the ZmABCG20 gene resulted in a male sterility phenotype consistent with zmabcg20-1. The above results demonstrate that ZmABCG20 is an essential gene for male fertility development in maize; its lack of function can lead to a male sterility phenotype of maize; the male sterility phenotype of the zmabcg20-1 mutant is produced by the ZmABCG20 gene described in Example 6. Caused by point mutations.
实施例12 ZmABCG20启动子克隆Example 12 ZmABCG20 promoter clone
使用引物pZmABCG20_F(序列如SEQ ID NO:13所示)和pZmABCG20_R(序列如SEQ ID NO:14所示)扩增玉米基因组DNA,可以获得大小为1653bp的DNA片段,其中起始密码子ATG上游1634bp(SEQ ID NO:12)。用在线转录元件分析工具PlantCARE(http://bioinformatics.psb.ugent.be/webtools/plantcare/html/)对这段序列进行分析,发现在+1237和+1385分别为CAAT-box和TATA-box;此外还有一些激素响应元件:脱落酸响应元件ABRE(GCAACGTGTC,+1236);茉莉酸响应元件TGACG_motif(TGACG,+655)和CGTCA_motif(CGTCA,+765);赤霉素响应元件GRAE_motif(TCTGTTG,+513;AAACAGA,+1397)。在+973有一个昼夜节律调控元件CAANNNNATC。丰富的转录和调控元件表明这一区域即为ZmABCG20的启动子区域。Amplification of maize genomic DNA using primers pZmABCG20_F (sequence as shown in SEQ ID NO: 13) and pZmABCG20_R (sequence as shown in SEQ ID NO: 14) can obtain a DNA fragment of 1653 bp in size, with a 1634 bp upstream of the initiation codon ATG. (SEQ ID NO: 12). The sequence was analyzed using the online transcription component analysis tool PlantCARE (http://bioinformatics.psb.ugent.be/webtools/plantcare/html/) and found to be CAAT-box and TATA-box at +1237 and +1385 respectively. In addition, there are some hormone response components: abscisic acid response element ABRE (GCAACGTGTC, +1236); jasmonic acid response elements TGACG_motif (TGACG, +655) and CGTCA_motif (CGTCA, +765); gibberellin response element GRAE_motif (TCTGTTG, +513; AAACAGA, +1397). In +973 there is a circadian rhythm control element CAANNNNATC. A rich transcriptional and regulatory element indicates that this region is the promoter region of ZmABCG20.
实施例13 突变基因的杂交转育Example 13 Hybridization of Mutant Genes
本发明获得的突变体及实施例9中所述突变基因的功能标记可用于各种分子标记辅助选择的方法,以回交转育为例,可按图8的步骤将不育基因zmabcg20-1通过杂交转育到其它玉米遗传背景中:The mutant obtained by the present invention and the functional marker of the mutant gene described in Example 9 can be used for various molecular marker-assisted selection methods, and backcrossing is taken as an example, and the sterile gene zmabcg20-1 can be obtained according to the procedure of FIG. Through hybridization to other corn genetic backgrounds:
①杂交:1 hybrid:
以zmabcg20-1突变株为母本,与受体玉米材料为父本杂交获得F 1种子; Using the zmabcg20-1 mutant as the female parent, the F 1 seed was obtained by crossing the recipient maize material with the male parent;
②第一轮回交:2 first round of back:
F 1播种后获得F 1植株,将F 1植株与轮回亲本进行杂交,获得BC 1种子; After sowing F 1 F 1 plants obtained, the F 1 plants hybridized with the recurrent parent to obtain BC 1 seeds;
③BC 1不育基因选择(前景选择): 3BC 1 sterile gene selection (foreground selection):
播种BC 1种子,获得不少于500株幼苗,在幼苗期采集各单株叶片,按实施例4所述方法提取DNA,利用实施例9中引物对(3326_F1、3326_R1)进行扩增和电泳,选取基因型为杂合的单株继续种植,弃去纯合野生型的单株; Seeding BC 1 seeds, obtaining not less than 500 seedlings, collecting individual leaves in the seedling stage, extracting DNA according to the method described in Example 4, and performing amplification and electrophoresis using the primer pair (3326_F1, 3326_R1) in Example 9. Select a single plant with a genotype that is heterozygous to continue planting, and discard the homozygous wild-type individual plants;
④BC 1背景选择: 4BC 1 background selection:
采用一组(例如100个,或200个等)在突变体zmabcg20-1和轮回亲本 之间存在多态的,且在基因组上均匀分布的分子标记(包括但不限于SSR、INDEL、SNP、EST、RFLP、AFLP、RAPD、SCAR等类型标记),对步骤③中选出的单株进行鉴定,选取与轮回亲本相似度高(例如大于88%相似度,或2%中选率等)的材料;A set of (eg, 100, or 200, etc.) molecular markers that are polymorphic between the mutant zmabcg20-1 and the recurrent parent and uniformly distributed across the genome (including but not limited to SSR, INDEL, SNP, EST , RFLP, AFLP, RAPD, SCAR and other types of markers), identify the individual plants selected in step 3, select materials with high similarity with the recurrent parent (for example, greater than 88% similarity, or 2% selection rate, etc.);
⑤第二轮回交:用步骤④中选出的单株为父本,为轮回亲本授粉,获得BC 2种子; 5 second round of backcrossing: using the single plant selected in step 4 as the male parent, pollinating the recurrent parent to obtain BC 2 seeds;
⑥BC 2的前景与背景选择:对选出的材料重复步骤③至步骤④的操作,选出与轮回亲本相似度高于选择标准(如相似度大于98%,或2%中选率等)的BC 2代植株; 6BC 2 foreground and background selection: Repeat step 3 to step 4 for the selected material, and select BC with similarity to the recurrent parent than the selection criteria (such as similarity greater than 98%, or 2% selection rate, etc.) 2 generation plants;
⑦自交获得BC 2F 2种子:对步骤⑥中选出的BC 2植株进行自交,获得BC 2F 2种子; 7 self-obtaining BC 2 F 2 seed: self-crossing the BC 2 plants selected in step 6 to obtain BC 2 F 2 seeds;
⑧BC 2F 2的前景选择:将步骤⑦中获得的BC 2F 2种子播种,获得500株以上幼苗,在幼苗期采集叶片,按实施例4所述方法提取DNA,利用实施例9中引物对(3326_F1、3326_R1)进行扩增和电泳,选出带型为纯合突变体和杂合型的单株继续栽培,剔除纯合野生型的单株; Prospect selection of 8BC 2 F 2 : seeding BC 2 F 2 seeds obtained in step 7 to obtain more than 500 seedlings, collecting leaves at the seedling stage, extracting DNA according to the method described in Example 4, using the primer pair of Example 9. (3326_F1, 3326_R1) performing amplification and electrophoresis, selecting a single plant with a homozygous mutant and a heterozygous type to continue cultivation, and eliminating the homozygous wild type individual plants;
⑨BC 2F 2的背景选择及应用:将步骤⑧中选出的单株按照步骤④的方法进行背景筛选,选出100%背景纯合的单株。如果中选单株的基因型为纯合突变体,则该单株为我们的最终目标材料,可进一步与轮回亲本杂交保存材料,或与其它玉米材料进行杂交。如果中选单株是杂合带型,可直接用于保存种质,或通过自交获得不育株用于杂交育种或制种。 Background selection and application of 9BC 2 F 2 : The selected plants in step 8 were screened according to the method of step 4, and 100% background homozygous individual plants were selected. If the genotype of the selected plant is a homozygous mutant, the single plant is our final target material, which can be further mixed with the recurrent parent to preserve the material or hybridize with other corn materials. If the selected single plant is a heterozygous belt type, it can be directly used to preserve the germplasm, or obtain a sterile plant by cross-breeding for cross breeding or seed production.
虽然,上文中已经用一般性说明及具体实施方案对本发明作了详尽的描述,但在本发明基础上,可以对之做一些修改或改进,这对本领域技术人员而言是显而易见的。因此,在不偏离本发明精神的基础上所做的这些修改或改进,均属于本发明要求保护的范围。Although the present invention has been described in detail with reference to the preferred embodiments of the present invention, it will be apparent to those skilled in the art. Therefore, such modifications or improvements made without departing from the spirit of the invention are intended to be within the scope of the invention.
本发明提供玉米基因ZmABCG20在调控作物雄性育性中的应用,玉米品种B73中ZmABCG20的基因组DNA序列如SEQ ID NO:1所示,所编码的蛋白序列如SEQ ID NO:3所示。本发明还提供基因ZmABCG20的突变体zmabcg20-1及其应用,突变基因序列如SEQ ID NO:7所示;还提供了该突变基因的分子标记鉴定方法。本发明提供的花粉发育控制基因、 突变体及其分子标记可应用于农作物杂交育种和杂交制种。本发明同时提供玉米基因ZmABCG20在调控作物雄性育性中的应用,玉米品种B73中ZmABCG20的基因组DNA序列如SEQ ID NO:1所示,所编码的蛋白序列如SEQ ID NO:3所示。本发明还提供基因ZmABCG20的突变体zmabcg20-1及其应用,突变基因序列如SEQ ID NO:7所示;还提供了该突变基因的分子标记鉴定方法。本发明提供的花粉发育控制基因、突变体及其分子标记可应用于农作物杂交育种和杂交制种,具有较好的经济价值和应用前景。The invention provides the application of the maize gene ZmABCG20 in regulating male fertility of crops. The genomic DNA sequence of ZmABCG20 in maize variety B73 is shown in SEQ ID NO: 1, and the encoded protein sequence is shown in SEQ ID NO: 3. The present invention also provides a mutant zmabcg20-1 of the gene ZmABCG20 and the use thereof, and the mutated gene sequence is shown as SEQ ID NO: 7; and a method for identifying a molecular marker of the mutated gene is also provided. The pollen development control gene, mutant and molecular marker thereof provided by the invention can be applied to crop cross breeding and hybrid seed production. The invention also provides the application of the maize gene ZmABCG20 in regulating male fertility of crops. The genomic DNA sequence of ZmABCG20 in maize variety B73 is shown in SEQ ID NO: 1, and the encoded protein sequence is shown in SEQ ID NO: 3. The present invention also provides a mutant zmabcg20-1 of the gene ZmABCG20 and the use thereof, and the mutated gene sequence is shown as SEQ ID NO: 7; and a method for identifying a molecular marker of the mutated gene is also provided. The pollen development control gene, the mutant and the molecular marker thereof provided by the invention can be applied to crop cross breeding and hybrid seed production, and have good economic value and application prospect.
Claims (30)
Priority Applications (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| PH1/2020/550178A PH12020550178B1 (en) | 2017-09-30 | 2018-09-29 | Use of maize gene zmabcg20 in regulating crop male fertility and dna molecular markers associated with maize male fertility and use thereof |
| BR112020006386-0A BR112020006386B1 (en) | 2017-09-30 | 2018-09-29 | USE OF A CORN GENE, METHOD FOR PREPARING A TRANSGENIC CORN, USE OF BIOLOGICAL MATERIAL, MUTANT GENE, PROTEIN ENCODED BY THE MUTANT GENE, USE OF THE MUTANT GENE, SPECIFIC PROMOTER FOR YOUNG EARS, USE OF THE SPECIFIC PROMOTER, DNA MOLECULAR MARKER, PRIMER, REAGENT OR DETECTION KIT, AND, USE OF THE DNA MOLECULAR MARKER, PRIMER OR REAGENT OR DETECTION KIT |
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN201710919714 | 2017-09-30 | ||
| CN201710919712 | 2017-09-30 | ||
| CN201710919714.6 | 2017-09-30 | ||
| CN201710919712.7 | 2017-09-30 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| WO2019062895A1 true WO2019062895A1 (en) | 2019-04-04 |
Family
ID=65900561
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/CN2018/108583 Ceased WO2019062895A1 (en) | 2017-09-30 | 2018-09-29 | Use of maize gene zmabcg20 in regulating crop male fertility and dna molecular markers associated with maize male fertility and use thereof |
Country Status (2)
| Country | Link |
|---|---|
| PH (1) | PH12020550178B1 (en) |
| WO (1) | WO2019062895A1 (en) |
Cited By (17)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN111205356A (en) * | 2020-01-15 | 2020-05-29 | 湖北大学 | A gene for regulating plant flowering period and its encoded protein and application |
| CN112553201A (en) * | 2020-12-10 | 2021-03-26 | 深圳大学 | Promoter ZmPSP-pro specifically expressed in maize tassel and application thereof |
| CN113151540A (en) * | 2021-03-15 | 2021-07-23 | 淮阴师范学院 | Specific molecular marker of rice nuclear male sterility gene OsNP1 genotype and application thereof |
| CN114480422A (en) * | 2022-02-09 | 2022-05-13 | 四川农业大学 | Application of Maize ZmBES1/BZR1-9 Gene in Breeding Early Flowering Plants |
| CN114591928A (en) * | 2022-04-02 | 2022-06-07 | 山东中农天泰种业有限公司 | A dCAPS molecular marker associated with amylopectin content in maize kernels |
| CN115369180A (en) * | 2021-07-30 | 2022-11-22 | 华中农业大学 | Coseparation gene molecular marker for identifying marigold male sterility, detection primer and detection kit |
| CN116042653A (en) * | 2022-12-21 | 2023-05-02 | 安徽农业大学 | Corn ZmMYB155 gene and application thereof |
| CN116590320A (en) * | 2023-05-09 | 2023-08-15 | 河南农业大学 | Corn grain size and amino acid content regulating gene ZmCRK3, encoding protein, SNP locus, functional marker and application thereof |
| CN116640228A (en) * | 2023-02-17 | 2023-08-25 | 广州大学 | Soybean MS2 antigen, monoclonal antibody thereof and application thereof |
| WO2023169490A1 (en) * | 2022-03-11 | 2023-09-14 | 中国科学院分子植物科学卓越创新中心 | Key gene for controlling the transformation of dent corn to flint corn |
| CN116769796A (en) * | 2023-08-11 | 2023-09-19 | 北京首佳利华科技有限公司 | ZmENR1 and application of coded protein thereof in corn fertility control |
| CN116837002A (en) * | 2023-09-01 | 2023-10-03 | 北京首佳利华科技有限公司 | Application of ZmDPP1 and its encoded protein in maize fertility control |
| CN116875580A (en) * | 2023-09-08 | 2023-10-13 | 北京首佳利华科技有限公司 | Creating maize msp1 male sterile lines using artificial mutations |
| CN117904131A (en) * | 2024-01-05 | 2024-04-19 | 安徽农业大学 | A corn mutant gene zmmate30 and its application in crop genetic breeding |
| CN118516399A (en) * | 2024-07-23 | 2024-08-20 | 北京中智生物农业国际研究院 | Application of corn ZmGPAT gene in improving salt tolerance of plants |
| CN118516484A (en) * | 2024-03-26 | 2024-08-20 | 四川农业大学 | Maize Nuclear Male Sterility Gene Ms16 and Its Molecular Marker and Application |
| CN120350061A (en) * | 2025-06-26 | 2025-07-22 | 华中农业大学 | Application of corn gene ZMM3 in corn yield control |
Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN106609281A (en) * | 2015-10-09 | 2017-05-03 | 上海师范大学 | Applications of pollen development-related ABC transport protein or coding gene of pollen development-related ABC transport protein, method used for culturing plant sterile lines, and plant breeding method |
-
2018
- 2018-09-29 WO PCT/CN2018/108583 patent/WO2019062895A1/en not_active Ceased
- 2018-09-29 PH PH1/2020/550178A patent/PH12020550178B1/en unknown
Patent Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN106609281A (en) * | 2015-10-09 | 2017-05-03 | 上海师范大学 | Applications of pollen development-related ABC transport protein or coding gene of pollen development-related ABC transport protein, method used for culturing plant sterile lines, and plant breeding method |
Non-Patent Citations (2)
| Title |
|---|
| DATABASE NCBI 20 March 2017 (2017-03-20), "Z ea Mays ABC SEC14-Like Protein 1 (LOC100282704), Transcript Variant xl, mRNA", XP055588282, Database accession no. XM-008660392.2 * |
| DATABASE Nucleotide 23 April 2017 (2017-04-23), "Zea Mays ABC Transporter-Like Protein (LOC100285145), mRNA", XP055588276, Database accession no. NM_001158039.1 * |
Cited By (26)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN111205356A (en) * | 2020-01-15 | 2020-05-29 | 湖北大学 | A gene for regulating plant flowering period and its encoded protein and application |
| CN112553201A (en) * | 2020-12-10 | 2021-03-26 | 深圳大学 | Promoter ZmPSP-pro specifically expressed in maize tassel and application thereof |
| CN113151540A (en) * | 2021-03-15 | 2021-07-23 | 淮阴师范学院 | Specific molecular marker of rice nuclear male sterility gene OsNP1 genotype and application thereof |
| CN113151540B (en) * | 2021-03-15 | 2023-08-11 | 淮阴师范学院 | Specific molecular marker of rice nuclear male sterile gene OsNP1 genotype and application thereof |
| CN115369180A (en) * | 2021-07-30 | 2022-11-22 | 华中农业大学 | Coseparation gene molecular marker for identifying marigold male sterility, detection primer and detection kit |
| CN115369180B (en) * | 2021-07-30 | 2025-06-20 | 华中农业大学 | Identification of co-segregating gene molecular markers, detection primers and detection kit for male sterility in marigold |
| CN114480422A (en) * | 2022-02-09 | 2022-05-13 | 四川农业大学 | Application of Maize ZmBES1/BZR1-9 Gene in Breeding Early Flowering Plants |
| CN114480422B (en) * | 2022-02-09 | 2022-09-23 | 四川农业大学 | Application of Maize ZmBES1/BZR1-9 Gene in Breeding Early Flowering Plants |
| WO2023169490A1 (en) * | 2022-03-11 | 2023-09-14 | 中国科学院分子植物科学卓越创新中心 | Key gene for controlling the transformation of dent corn to flint corn |
| CN114591928A (en) * | 2022-04-02 | 2022-06-07 | 山东中农天泰种业有限公司 | A dCAPS molecular marker associated with amylopectin content in maize kernels |
| CN114591928B (en) * | 2022-04-02 | 2023-10-24 | 山东中农天泰种业有限公司 | A dCAPS molecular marker associated with amylopectin content in corn kernels |
| CN116042653A (en) * | 2022-12-21 | 2023-05-02 | 安徽农业大学 | Corn ZmMYB155 gene and application thereof |
| CN116042653B (en) * | 2022-12-21 | 2024-02-13 | 安徽农业大学 | Application of a corn ZmMYB155 gene in regulating corn grain morphology and starch synthesis |
| CN116640228A (en) * | 2023-02-17 | 2023-08-25 | 广州大学 | Soybean MS2 antigen, monoclonal antibody thereof and application thereof |
| CN116590320A (en) * | 2023-05-09 | 2023-08-15 | 河南农业大学 | Corn grain size and amino acid content regulating gene ZmCRK3, encoding protein, SNP locus, functional marker and application thereof |
| CN116769796A (en) * | 2023-08-11 | 2023-09-19 | 北京首佳利华科技有限公司 | ZmENR1 and application of coded protein thereof in corn fertility control |
| CN116769796B (en) * | 2023-08-11 | 2023-11-10 | 北京首佳利华科技有限公司 | Application of ZmENR1 and its encoded protein in maize fertility control |
| CN116837002B (en) * | 2023-09-01 | 2023-11-28 | 北京首佳利华科技有限公司 | Application of ZmDPP1 and coded protein thereof in corn fertility control |
| CN116837002A (en) * | 2023-09-01 | 2023-10-03 | 北京首佳利华科技有限公司 | Application of ZmDPP1 and its encoded protein in maize fertility control |
| CN116875580B (en) * | 2023-09-08 | 2023-12-01 | 北京首佳利华科技有限公司 | Artificial mutation for creating maize msp1 male sterile line |
| CN116875580A (en) * | 2023-09-08 | 2023-10-13 | 北京首佳利华科技有限公司 | Creating maize msp1 male sterile lines using artificial mutations |
| CN117904131A (en) * | 2024-01-05 | 2024-04-19 | 安徽农业大学 | A corn mutant gene zmmate30 and its application in crop genetic breeding |
| CN118516484A (en) * | 2024-03-26 | 2024-08-20 | 四川农业大学 | Maize Nuclear Male Sterility Gene Ms16 and Its Molecular Marker and Application |
| CN118516399A (en) * | 2024-07-23 | 2024-08-20 | 北京中智生物农业国际研究院 | Application of corn ZmGPAT gene in improving salt tolerance of plants |
| CN118516399B (en) * | 2024-07-23 | 2024-10-15 | 北京中智生物农业国际研究院 | Application of corn ZmGPAT gene in improving salt tolerance of plants |
| CN120350061A (en) * | 2025-06-26 | 2025-07-22 | 华中农业大学 | Application of corn gene ZMM3 in corn yield control |
Also Published As
| Publication number | Publication date |
|---|---|
| PH12020550178B1 (en) | 2024-03-20 |
| BR112020006386A2 (en) | 2020-09-29 |
| PH12020550178A1 (en) | 2021-03-01 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| WO2019062895A1 (en) | Use of maize gene zmabcg20 in regulating crop male fertility and dna molecular markers associated with maize male fertility and use thereof | |
| JP6978152B2 (en) | Multiphase spore reproductive gene | |
| CN106164254A (en) | For inducing a kind of apomixis i.e. gene of parthenogenetic reproduction | |
| CN107090464B (en) | Insect-resistant herbicide-resistant corn transformation event and creation method and detection method thereof | |
| CN107475210B (en) | A rice bacterial blight resistance-related gene OsABA2 and its application | |
| CN109295246B (en) | DNA molecular marker related to male fertility of corn and application thereof | |
| US20220106607A1 (en) | Gene for parthenogenesis | |
| CN104611359B (en) | The application of ZmSPL1 albumen and its encoding gene in regulation and control Maize Kernel Development | |
| CN109439667A (en) | Application of the corn gene ZmABCG20 in regulation crop male fertile | |
| CN104926931B (en) | Paddy female sterile gene and its application | |
| WO2016054236A1 (en) | In situ embryo rescue and recovery of non-genetically modified hybrids from wide crosses | |
| CN107974457A (en) | The plant of fruit size increase | |
| CN107858370B (en) | Method for preparing plant with reduced fertility | |
| CN108277211B (en) | Corn MS30 gene mutant and molecular identification method and application thereof | |
| CN107573411B (en) | Application of wheat TaZIM1-7A protein in regulation and control of crop heading period | |
| CN107142265B (en) | Application of rice 3-flower spikelet gene LF1 in improving the yield of gramineous grain crops | |
| CN109554373B (en) | Rice FON2 gene mutant and molecular identification method and application thereof | |
| CN113583099A (en) | Method for cultivating alfalfa male sterile line and corresponding maintainer line and related biological material thereof | |
| CN112522283A (en) | Pollen development related gene and application thereof | |
| CN115369120B (en) | Temperature-regulating genes at the starting point of fertility transfer of rice temperature-sensitive dual-purpose male sterile lines and their applications | |
| CN111825752B (en) | Rice spikelet clustering mutant and molecular identification method and application thereof | |
| WO2014063442A1 (en) | Method for propagating sterile male plant line | |
| CN115704034A (en) | Rice cytoplasmic male sterility restorer gene RFFA and its application | |
| CN106754964B (en) | Cloning and application of nap cytoplasmic male sterility restorer gene Rfn in Brassica napus | |
| CN103014018B (en) | Rape bnrabgdi3 gene and application thereof |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| 121 | Ep: the epo has been informed by wipo that ep was designated in this application |
Ref document number: 18863269 Country of ref document: EP Kind code of ref document: A1 |
|
| NENP | Non-entry into the national phase |
Ref country code: DE |
|
| REG | Reference to national code |
Ref country code: BR Ref legal event code: B01A Ref document number: 112020006386 Country of ref document: BR |
|
| ENP | Entry into the national phase |
Ref document number: 112020006386 Country of ref document: BR Kind code of ref document: A2 Effective date: 20200330 |
|
| 122 | Ep: pct application non-entry in european phase |
Ref document number: 18863269 Country of ref document: EP Kind code of ref document: A1 |
|
| 32PN | Ep: public notification in the ep bulletin as address of the adressee cannot be established |
Free format text: NOTING OF LOSS OF RIGHTS PURSUANT TO RULE 112(1) EPC (EPO FORM 1205A DATED 13/10/2020) |
|
| 122 | Ep: pct application non-entry in european phase |
Ref document number: 18863269 Country of ref document: EP Kind code of ref document: A1 |