WO2014205596A1 - Atp hydrolase atpase-2 from cotton and coding gene and use thereof - Google Patents
Atp hydrolase atpase-2 from cotton and coding gene and use thereof Download PDFInfo
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- WO2014205596A1 WO2014205596A1 PCT/CN2013/000749 CN2013000749W WO2014205596A1 WO 2014205596 A1 WO2014205596 A1 WO 2014205596A1 CN 2013000749 W CN2013000749 W CN 2013000749W WO 2014205596 A1 WO2014205596 A1 WO 2014205596A1
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- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N65/00—Biocides, pest repellants or attractants, or plant growth regulators containing material from algae, lichens, bryophyta, multi-cellular fungi or plants, or extracts thereof
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
- C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
- C12N15/8273—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for drought, cold, salt resistance
Definitions
- the present invention relates to plant proteins and their coding genes and applications, and more particularly to a cotton-derived ATP hydrolase ATPase-2 and its encoding gene, and its use in the cultivation of transgenic plants with improved salt tolerance.
- Salt stress is one of the most important abiotic stress hazards in agricultural production in the world.
- Salted soil is usually dominated by sodium salt, calcium salt or magnesium salt, and is a major factor affecting plant growth and causing food and economic crop yield reduction.
- the world's saline-alkali soil covers an area of about 400 million hectares, accounting for one-third of the irrigated farmland.
- Saline-alkali land is widely distributed in China, and the existing saline-alkali land area is about 0.4 million hectares. With the increase of population in China and the reduction of cultivated land, the development and utilization of saline-alkali resources has extremely important practical significance.
- the salt tolerance of plants is a very complex quantitative trait, and its salt tolerance mechanism involves various levels from plants to organs, tissues, physiology and biochemistry to molecules.
- scientists from various countries have also done a lot of work for this purpose, and have made a lot of new progress, especially in the use of the higher model plant Arabidopsis to study the salt-tolerant molecular mechanism of plants, making breakthroughs in research in this field ( Zhu JK. 2002. Salt and drought stress singal transduction in plants. Annu. Rev. Plant Biol. 53 : 1247- 1273 ; Zhang ZL. 201 1.
- Arabidopsis Floral Initiator SKB 1 Confers High Salt Tolerance by Regulating Transcription and Pre-mRNA Splicing Through Altering Histone H4R3 and Small Nuclear Ribonucleoprotein LSM4 Methylation. Plant Cell, 23 : 396-41 1 ).
- Higher plant cells can sense changes in physicochemical parameters in the external environment through various pathways, thereby converting extracellular signals into intracellular signals, and finally transmitting stress signals to the nucleus through a series of signal transductions, activating transcription factors, and being activated.
- the transcription factor acts on the functional gene and initiates the expression of the stress response gene to increase the tolerance of the plant.
- the present inventors cloned a coding gene for an ATP hydrolase (designated herein as ATPase-2) of cotton using SSH (Suppression Subtractive Hybridization) in combination with RACE (rapid amplification of cDNA ends), and determined its DNA sequence. Moreover, it was found that the transgenic plants can significantly improve the salt tolerance of the transgenic plants after they are introduced into the plants by transgenic technology, and these traits can be stably inherited.
- the first aspect of the present invention provides an ATP hydrolase ATPase-2 encoding gene (designated herein as GhA TPase-2) of cotton, the sequence of which is SEQ ID NO: 2.
- a second aspect of the present invention provides a recombinant expression vector comprising the gene of the first aspect of the present invention, which is obtained by inserting the gene into an expression vector, and the nucleotide sequence of the gene is The expression control sequence of the recombinant expression vector is operably linked; preferably, the expression vector is pCAMBIA2300 ; preferably, the recombinant expression vector is the 35 S-GhATPase-2-2300 vector shown in Figure 2.
- a third aspect of the invention provides a recombinant cell comprising the gene of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention; preferably, the recombinant cell is a recombinant Agrobacterium cell.
- a fourth aspect of the invention provides a method for improving salt tolerance of a plant, comprising: introducing the gene of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention into a plant or plant tissue and expressing the gene
- the plant is Arabidopsis thaliana.
- a fifth aspect of the invention provides a method for producing a transgenic plant, comprising: cultivating a plant or plant tissue comprising the gene of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention under conditions effective to produce a plant
- the plant is Arabidopsis thaliana.
- a sixth aspect of the present invention provides the gene according to the first aspect of the present invention, the recombinant expression vector of the second aspect of the present invention or the recombinant cell of the third aspect of the present invention for improving salt tolerance of a plant and for use in plant breeding Use;
- the plant is Arabidopsis thaliana.
- a seventh aspect of the invention provides the protein encoded by the gene of the first aspect of the invention, the amino acid sequence of which is set forth in SEQ ID NO: 1.
- FIG 1 shows the construction of the plant expression vector (35S-GhATPase-2-2300) of the GhATPsae-2 gene (Fig. la-lb).
- Figure 2 is a plasmid map of the plant expression vector (35S-GhATPase-2-2300) of the GhATPase-2 gene.
- Fig. 3 shows the results of salt tolerance test of T1 Arabidopsis thaliana plants transgenic with GhATPase-2 gene.
- Tli5 showed significant salt tolerance, and the results of Tlil3 and T1U6 were similar thereto, and are not shown here.
- Figure 4 shows the results of molecular level detection of the transcription level of GhATPase-2 gene in 1 ⁇ generation transgenic Arabidopsis plants and non-transgenic control plants by reverse transcription PCR.
- M is DNA Ladder Marker ( DL2000 )
- 1-8 is salt-tolerant T1 transgenic Arabidopsis plants (Tli5, Tlil3, Tlil6, respectively)
- 9 is a plasmid PCR positive control (35S-GhATPase-2-2300) Plasmid)
- 10-13 is a non-transgenic control Arabidopsis plant.
- African cotton (National Cotton Medium Term Bank, obtained by the China Cotton Research Institute, Uniform No.: ZM-06838) Seeded on sterilized vermiculite, cultured at 25 °C, light dark cycle 16h/8h, poured 1 per week /2MS medium ( 9. 39 mM KN0 3 , 0. 625 mM KH2P0 4 , 10. 3 mM NH 4 N0 3 , 0.75 mM MgS0 4 , 1. 5 mM CaCl 2 , 50 ⁇ M KI , 100 ⁇ MH 3 B0 3 , 100 ⁇ M MnS0 4 , 30 ⁇ M ZnS0 4 , 1 ⁇ M Na 2 Mo0 4 , 0. 1 ⁇ M CoCl 2 , 100 ⁇ M Na 2 EDTA, 100 ⁇ M FeS0 4 ) once. It was used for experiments when the seedlings were as long as 25-30 cm.
- the test seedlings were divided into 2 groups of 4 plants each.
- the first group was a control group, cultured at 25 ° C under light, and placed in 1/2 MS liquid medium.
- the second group was treated with 25 °C, light culture, placed in 1/2 MS liquid medium supplemented with a final concentration of 200 mM NaCl, and treated for 6 hours. After the treatment, the roots of the two groups were cut out in time. After rapid freezing with liquid nitrogen, it was stored in a -70 °C refrigerator.
- the absorbance of total RNA at 260 nm and 280 nm, OD 26 was determined using a HITACHI UV spectrophotometer U-2001. /OD 28 .
- the ratio of 1.8-2.0 indicates that the total RNA purity is high.
- the integrity of total RNA is detected by 1.0% agarose gel electrophoresis.
- the brightness of the 28S band is about twice that of the 18S band, indicating that the RNA integrity is good.
- the method according to Clontech's PCR-select TM cDNA Subtraction Kit kit instructions will be shown suppression subtractive hybridization.
- Driver mRNA and Tester mRNA were reverse transcribed, respectively, to obtain double-stranded cDNA, and 2 ⁇ g of Tester cDNA and 2 ⁇ g of Driver cDNA were used as starting materials for subtractive hybridization.
- the Tester cDNA and Driver cDNA were digested with Rsa I for 1.5 hours in a 37 ° C water bath, and then the digested Tester cDNA was divided into two equal portions, and the different linkers were ligated, and the Driver cDNA was not ligated.
- Two tester cDNAs with different adaptors were mixed with excess Driver cDNA for the first forward subtractive hybridization.
- the products of the two first forward subtractive hybridizations were mixed, and a second forward subtractive hybridization was performed with the newly denatured Driver cDNA, and the differentially expressed genes were amplified by two inhibitory PCR amplifications (PCR). Before, the second forward subtraction hybridization product was end-filled).
- the second inhibitory PCR amplification product of the second forward subtractive hybridization cDNA fragment (purified using QIAquick PCR Purification Kit, purchased from Qiagen) according to the instructions of the pGEM-T Easy kit (purchased from Promega)
- the specific steps are linked to the pGEM-T Easy vector as follows: The following components are sequentially added to the 200 ⁇ l PCR tube: Purified combined positive subtractive hybridization cDNA fragment of the second inhibitory PCR product 3 ⁇ 1 , 2 X T4 DNA ligase buffer 5 ⁇ l, pGEM-T Easy vector 1 ⁇ l, ⁇ 4 DNA ligase 1 ⁇ l, ligated overnight at 4 °C.
- the white colonies picked were inoculated into LB liquid medium (same as above) containing 50 ⁇ g/ml ampicillin in 96-well cell culture plate (CORNING), and cultured overnight at 37 °C, and glycerol was added to the final concentration of glycerol. 20% (by volume), then keep at -80 °C
- Nested PCR primers Primer 1 and Primer 2R were used to verify the bacteriological activity of the cultured bacteria.
- GhATPase-2 GSP1 SEQ ID No: 4:
- the experimental procedure was performed according to the kit instructions (3 'RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen).
- the first round of PCR amplification was carried out using SEQ ID NO: 4 and the universal primer AUAP (provided with the kit), and the cDNA obtained by reverse transcription of the mRNA extracted from the salt-treated group was used as a template. Specific steps are as follows:
- PCR reaction system 5 ⁇ 1 ⁇ ⁇ ⁇ Buffer 3 ⁇ 1 2.5 mM dNTP, 2.0 ⁇ 1 cDNA, 1.0 ⁇ 1 Ex Taq (purchased from TAKARA), 10 ⁇ M primers SEQ ID NO: 4 and AUAP Each 2.0 ⁇ ⁇ and 35 ⁇ ⁇ double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (94 ° C for 30 seconds, 58 ° C for 30 seconds, 72 ° C for 2 minutes), 72 ° C for 10 minutes.
- the obtained PCR product was diluted 50-fold with double distilled water, and 2.0 ⁇ L was used as a template, and the second round of PCR amplification was carried out by using SEQ ID NO: 5 and the universal primer AUAP.
- the specific steps are as follows:
- PCR reaction system 5 ⁇ 1 lO X Ex Buffer 3 ⁇ 1 2.5 mM dNTP, 2.0 ⁇ l diluted first round PCR product, 1.0 ⁇ 1 Ex Taq 10 ⁇ M primer SEQ ID NO: 5 and P AUAP Each of 2.0 ⁇ 1 and 35 ⁇ l of double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
- a 1300 bp fragment (Gel Extraction Kit from OMEGA) in the second round of PCR product was recovered and ligated into pGEM-T Easy vector, and then transformed into E. coli JM109 competent cells (specific method as above)
- the transformed bacterial solution was applied to LB solid medium containing 50 g/mL ampicillin and 40 ⁇ gmL X-gaK 24 g/mL IPTG for screening. 10 white colonies were randomly picked and inoculated into LB liquid medium containing 50 g/ml ampicillin, and cultured overnight at 37 ° C, glycerol was added to a final concentration of glycerol of 20% (volume ratio), and stored at -80 ° C. .
- GhATPase-2 GSP3 SEQ ID No: 6:
- GhATPase-2GSP4 SEQ ID No: 7:
- GhATPase-2 GSP5 SEQ ID No: 8:
- the GGACTACCAG AAATTTCAGG AAG test procedure was performed according to the kit instructions (5 'RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen).
- the cDNA obtained by reverse transcription of the mRNA extracted from the salt-treated group (reverse transcription primer SEQ ID NO: 6, dCTP plus tail) was used as a template.
- reverse transcription primer SEQ ID NO: 6, dCTP plus tail was used as a template.
- PCR reaction system 5 ⁇ 1 ⁇ ⁇ ⁇ Buffer 3 ⁇ 1 2.5 mM dNTP, 2.0 ⁇ 1 cDNA, 1.0 ⁇ 1 Ex Taq (purchased from TAKARA), 10 ⁇ M primers SEQ ID NO: 7 and AAP Each of 2.0 ⁇ 1 and 35 ⁇ l of double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 55 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
- the obtained PCR product was diluted 50 times with double distilled water, and 2.0 ⁇ ⁇ was used as a template, and the second round of PCR amplification was carried out by using SEQ ID NO: 8 and the primer AUAP.
- the specific steps are as follows:
- PCR reaction system 5 ⁇ 1 lO X Ex Buffer 3 ⁇ 1 2.5 mM dNTP, 2.0 ⁇ l diluted first round PCR product, 1.0 ⁇ 1 Ex Taq 10 ⁇ M primer SEQ ID NO: 8 and P AUAP Each of 2.0 ⁇ 1 and 35 ⁇ l of double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
- a 2700 bp band (Gel Extraction Kit from OMEGA) was recovered from the second round of PCR product and ligated into pGEM-T Easy vector, which was then transformed into E. coli JM109.
- the transformed bacterial solution was applied to LB solid medium containing 50 g/mL ampicillin and 40 ⁇ gmL X-gaK 24 g/mL IPTG for screening.
- Ten white colonies were randomly picked and inoculated in LB liquid medium containing 50 g/ml ampicillin. After incubation at 37 °C overnight, glycerol was added to a final concentration of glycerol of 20% (volume c ratio), and stored at -80 °C. spare.
- the G/L4 Pa-2 full-length coding gene was cloned by SEQ ID NO: 10 and SEQ ID NO: 11.
- the PCR reaction was carried out using the cDNA of the above cotton as a template using PrimeSTAR HS DNA polymerase of TaKaRa. 50 yl PCR reaction system: 10 yl 5 X PS Buffer, 3 ⁇ 1 2.5 mM dNTP, 2.0 ⁇ 1 cDNA 1.0 ⁇ 1 PrimeSTAR HS DNA polymerase, 10 ⁇ M primers SEQ ID NO: 10 and SEQ ID NO: 11 Each of 2.0 ⁇ 1 and 30 ⁇ l of double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 3 minutes), extension at 72 ° C 10 minute.
- PCR amplification product plus A tail 2.5 times the volume of absolute ethanol was added to the PCR product, placed at -20 ° C for 10 minutes, centrifuged, the supernatant was removed, air-dried, and the resulting precipitate was dissolved in 21 ⁇ l of double distilled water. Then, 2.5 ⁇ l of OXEx Buffer 0.5 ⁇ 15 mM dATP, 1.0 lExTaq was added thereto. Reaction conditions: The reaction was carried out at 70 ° C for 30 minutes.
- the obtained DNA fragment of about 3000 bp was recovered (Omega recovery kit), and ligated into the pGEM T-easy vector to obtain a GhATPase-2-pGEM plasmid, and then the ligated product was transformed into E. coli JM109 competent cells (method) Same as above), and the transformed bacterial liquid was applied to LB solid medium containing 50 g/mL ampicillin and 40 g/mL X-gaK 24 g/mL IPTG for screening. 10 white colonies were randomly picked and inoculated in LB liquid medium containing 50 g/ml ampicillin.
- Amino acid sequence of ATPase-2 protein SEQ ID NO: 1
- the plant binary expression vector pCAMBIA2300 (purchased from Beijing Dingguo Changsheng Biotechnology Co., Ltd.) was selected as a plant expression vector, and the 35S promoter containing the double enhancer of the ⁇ gene was replaced with the Pnos promoter to reduce the expression of prion protein in plants. .
- the 35S promoter and Tnos terminator were selected as promoters and terminators of the G/L4 Pa-2 gene, respectively.
- the construction flow chart is shown in Figure 1.
- Pnos was amplified using the plant expression vector pBI121 plasmid (purchased from Beijing Huaxia Ocean Technology Co., Ltd.) using TaKaRa's PrimeSTAR HS DNA polymerase.
- 50 l PCR reaction system 10 l 5 X PS Buffer, 3 ⁇ 1 2.5 mM dNTP, 1.0 ⁇ 1 ⁇ 121 plasmid, 1.0 ⁇ ⁇ PrimeSTAR HS DNA polymerase, 10 ⁇ M primers SEQ ID NO: 12 and SEQ ID NO : 13 each of 2.0 ⁇ ⁇ and 31 ⁇ l of double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 56 ° C for 30 seconds, extension at 72 ° C for 30 seconds), extension at 72 ° C for 10 minutes.
- the resulting PCR product was digested with EcoRI, Bglll, and ligated into pCAMBIA2300 according to the kit instructions (Promega, T4 ligase kit) to obtain pCAMBIA2300-1.
- Tnos was amplified using the primers SEQ ID NO: 14 and SEQ ID NO: 15 using the pBI121 plasmid as a template, and TaKaRa's PrimeSTAR HS DNA polymerase was used.
- 50 ⁇ 1 PCR reaction system 10 ⁇ ⁇ 5 X PS Buffer 3 ⁇ 1 2.5 mM dNTP, 1.0 ⁇ 1 pBI121 plasmid, 1.0 ⁇ 1 Prime STAR, 10 ⁇ ⁇ primers SEQ ID NO: 14 and SEQ ID NO: 15 2.0 ⁇ l and 31 ⁇ l of double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 30 seconds), extension at 72 ° C for 10 minutes.
- the resulting PCR product was ligated by Kpnl and EcoRI (Promega T4 ligase kit) to pCAMBIA2300-1 to obtain pCAMBIA2300-2.
- the 35S promoter was amplified using the primers SEQ ID NO: 16 and SEQ ID NO: 17 using the pCAMBIA2300 plasmid as a template.
- PrimeSTAR HS DNA polymerase using TaKaRa. 50 ⁇ 1 PCR reaction system: 10 ⁇ 1 5XPS Buffer, 3 ⁇ 1 2.5 mM dNTP, 1.0 ⁇ 1 pCAMBIA 2300 plasmid, 1.0 ⁇ 1 PrimeSTAR HS DNA polymerase, 10 ⁇ M primer SEQ ID NO: 16 and P SEQ ID NO: 17 each of 2.0 ⁇ and 31 ⁇ double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 30 seconds), extension at 72 ° C for 10 minutes.
- the resulting PCR product was ligated by HindIII, Sail digestion (ligation method as above) to pCAMBIA2300-2 to obtain pCAMBIA2300-3.
- TGAGTCGACAGAGATAGATTTGTAGAGAGACT Amplifies the full-length sequence of the G/ ⁇ Pa ⁇ -2 encoding gene with primers SEQ ID NO: 18 and SEQ ID NO: 19 (template is the positive GhATPase-2-pGEM plasmid obtained in Example 2), using PrimeSTAR of TaKaRa HS DNA polymerase.
- PCR reaction system 10 ⁇ 5XPS Buffer 3 ⁇ 1 2.5 mM dNTP 1.0 ⁇ 1 GhATPase-2-pGEM plasmid, 1.0 ⁇ 1 PrimeSTAR HS DNA polymerase, 10 ⁇ M primers SEQ ID NO: 18 and SEQ ID NO: 19 2.0 ⁇ 1 and 31 ⁇ 1 double distilled water.
- PCR reaction conditions Pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 3 minutes), extension at 72 ° C for 10 minutes.
- the obtained PCR product was ligated by Sall and Smal (connection method as above) to pCAMBIA2300-3, and the plant expression vector 35S-GhATPase-2-2300 was obtained after verification (Fig. 2).
- Agrobacterium tumefaciens LBA4404 purchased from Biovector Science Lab, Inc. Preparation of Competent Cells: Agrobacterium LBA4404 was spotted on LB solid medium containing 50 ⁇ g/ml rifampicin and 50 ⁇ g/ml streptomycin Incubate at 28 ° C for 1 to 2 days. Single colonies were picked and inoculated into 5 ml of LB liquid medium containing 50 ⁇ g/ml rifampicin and 50 ⁇ g/ml streptomycin, and cultured overnight (about 12-16 hours) to OD 6 by shaking at 28 °C. . A value of 0.4 forms a seed broth.
- Transformation of Agrobacterium The LBA4404 competent cells were thawed on ice, and 1 ⁇ l of the plasmid 35S-GhATPase-2-2300 obtained in Example 3 was added to 40 ⁇ l of the competent cells, and the mixture was mixed and ice bathed. About 10 minutes. The mixture of the competent cells after the ice bath and the 35S-GhATPase-2-2300 plasmid was transferred to an ice-cold 0.1 cm size electric shock cup (purchased from Bio-Rad) using a micropipette, and tapped to make the suspension Arrive at the bottom of the electric shock cup, taking care not to have air bubbles.
- an electric shock cup purchased from Bio-Rad
- Example 6 Arabidopsis flower leaching transformation:
- the Agrobacterium liquid of the transformed expression vector 35S-GhATPase-2-2300 obtained in Example 4 was inoculated to an LB liquid medium containing 10-50 ⁇ 8 / ⁇ 1 kanamycin (kan), and cultured overnight. Inoculated in the morning to 1:50 in a new LB medium (1 L) containing 50 ⁇ 8 / ⁇ 1 kanamycin, and cultured for about 8 hours until the Agrobacterium liquid OD600 should be between 1.0 and 1.2.
- Seed disinfection first soak for 10 minutes with 70% ethanol, occasionally suspend the seeds; then wash with sterile water four times, and occasionally suspend the seeds. Then, the treated seeds were uniformly coated on the surface of 1/2MS solid screening medium containing 50 ⁇ 8 / ⁇ 1 kanamycin for 2 days (a 150 mm diameter plate was sown for up to 1500 seeds), 4 The solution was vernalized for 2 days, and then cultured for 7-10 days under the conditions of a constant temperature of 22 ° C, an illumination intensity of 3500-4000 lx, and a photoperiod of 12 hours of darkness/12 hours of light. .
- the plants capable of germination and normal growth were transferred to the soil for further cultivation. 1-2 leaves of each plant capable of normal growth on the screening medium were extracted, and the DNA was extracted as a template, and PCR detection was carried out using SEQ ID NO: 18 and SEQ ID NO: 19 (reaction system and conditions are the same as above) The plants that were negative by PCR were removed, and the seeds of the plants positive for PCR were collected and labeled as T0il-T0i21.
- Example 8 Transgenic Arabidopsis thaliana T1 plants overexpressing GhATPase-2 were selected for water uptake, and the soily soft vermiculite was combined with nutrient soil (1:1) as the Arabidopsis planting soil. Each transformant of T0il-T0i21 and the non-transgenic control Arabidopsis seeds were each sown in 2 pots, and 20-30 seeds were seeded per pot. After sowing, the film is covered with a film to provide a moist environment for plant growth. The temperature was 22 ° C, the light intensity was 3500-4000 lx, the photoperiod was 12 hours dark, 12 hours light culture, and 1/2 MS was watered every 7 days.
- Example 9 Salt tolerance test of transgenic Arabidopsis thaliana T1 plants overexpressing GhATPase-2
- the transgenic Arabidopsis thaliana and the control Arabidopsis thaliana each retained a potted plant in Example 8 and were normally treated with 1/2 MS, respectively.
- T1 generation transgenic plants The salt tolerance of the plants grown from the seeds of the plants showed that the T1 transgenic plants Tli5, Tlil3, and ⁇ 1 ⁇ 16 showed significant salt tolerance (see Figure 3, Tli5, Tlil3, T1U6 results and Similar, not shown here).
- Example 9 Eight T1 transgenic plants with good salt tolerance in Example 9 were randomly selected (one of the above-mentioned Tli5, Tlil3, and Tlil6 three salt-tolerant strains), and the control plants in Example 9 were randomly selected from 4 plants.
- the leaves (0.05 mM) were treated with salt (150 mM NaCl) for 14 days, and total RNA was extracted using a plant RNA extraction kit (Invitrogen).
- the absorbance values of total RNA obtained at 260 nm and 280 nm were determined by ultraviolet spectrophotometry, and the respective RNA concentrations were calculated.
- Reverse transcription was carried out according to the method shown by Invitrogen reverse transcription assay L1 box Superscript III Reverse Transcriptase (1 total RNA as a template, reverse transcription primer SEQ ID NO: 11).
- the GhATPase-2 fragment was amplified using primers SEQ ID NO: 10 and SEQ ID NO: 20 (SEQ ID NO: 20: CTGAATTGAA GGCCTCTACT TG), and its transcription was examined.
- PrimeSTAR HS DNA polymerization using TaKaRa The enzyme was subjected to a PCR reaction using the cDNA obtained by the above reverse transcription as a template.
- PCR reaction system 10 ⁇ 1 5XPS Buffer, 3 ⁇ 12.5 mM dNTP, 2.0 ⁇ 1 cDNA, 1.0 ⁇ 1 PrimeSTAR HS DNA polymerase, 10 ⁇ primers SEQ ID NO: 10 and SEQ ID NO: 20 each 2.0 ⁇ 1, and 30 ⁇ 1 double distilled water.
- PCR reaction conditions pre-denaturation at 94 ° C for 5 minutes, 32 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
- M is DNA Ladder Marker (DL2000, purchased from Shenzhen Ruizhen Biotechnology Co., Ltd.), 1-8 is a salt-tolerant T1 transgenic Arabidopsis plant, and 10-13 is a non-transgenic control Arabidopsis plants, 9 is a plasmid PCR positive control (35S-GhATPase-2-2300 plasmid).
- the size of the band shown is identical to the size of the positive control (approximately 1600 bp).
- the results showed that there was significant transcription of G/ ⁇ 1 ⁇ 4 ⁇ -2 in the salt-tolerant T1 transgenic Arabidopsis plants, and no GhATP-2 transcription in the non-transgenic control Arabidopsis plants.
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Abstract
Description
一种棉花 ATP水解酶 ATPase-2及其编码基因与应用 Cotton ATP hydrolase ATPase-2 and its coding gene and application
技术领域 本发明涉及植物蛋白及其编码基因与应用, 特别是涉及一个来源于棉花的 ATP水 解酶 ATPase-2及其编码基因, 以及其在培育耐盐性提高的转基因植物中的应用。 TECHNICAL FIELD The present invention relates to plant proteins and their coding genes and applications, and more particularly to a cotton-derived ATP hydrolase ATPase-2 and its encoding gene, and its use in the cultivation of transgenic plants with improved salt tolerance.
背景技术 盐胁迫是世界农业生产最重要的非生物逆境危害之一, 盐渍土壤通常以钠盐、 钙 盐或镁盐为主, 成为影响植物生长、 导致粮食和经济作物减产的主要因素。 世界上盐 碱土的面积约有 4亿公顷, 占灌溉农田的 1/3。 盐碱地在中国分布广泛, 现有盐碱地面 积约 0. 4亿公顷。 随着我国人口增加, 耕地减少, 盐碱地资源的开发利用有着极其重 要的现实意义。 而植物抗盐碱、 耐干旱能力的提高和适宜在盐碱地上生长并具有较高 经济和生态价值的植物种或品系的选育, 则是利用盐碱地经济、 有效的措施。 对绝大 多数农作物来说,大多数植物对盐碱、干旱的耐受性差,只能生长在氯化钠含量为 0. 3% 以下的土壤上,土壤中过量的 Na+会对植物体的正常的生长代谢产生毒害作用。因此如 何在盐渍环境下提高作物产量就成为全世界农业生产中十分重要的问题。 BACKGROUND OF THE INVENTION Salt stress is one of the most important abiotic stress hazards in agricultural production in the world. Salted soil is usually dominated by sodium salt, calcium salt or magnesium salt, and is a major factor affecting plant growth and causing food and economic crop yield reduction. The world's saline-alkali soil covers an area of about 400 million hectares, accounting for one-third of the irrigated farmland. Saline-alkali land is widely distributed in China, and the existing saline-alkali land area is about 0.4 million hectares. With the increase of population in China and the reduction of cultivated land, the development and utilization of saline-alkali resources has extremely important practical significance. The selection of plant resistance to salt and alkali, drought-tolerant ability and plant species or strains suitable for growth on saline-alkali land with high economic and ecological value is an economical and effective measure to utilize saline-alkali land. For most crops, most plants are poorly tolerant to saline and alkali, and can only grow on soils with a sodium chloride content of less than 0.3%. Excess Na + in the soil will be plant Normal growth metabolism produces toxic effects. Therefore, how to increase crop yield in a salted environment has become a very important issue in agricultural production worldwide.
植物的耐盐性是一个十分复杂的数量性状,其耐盐机制涉及从植株到器官、组织、 生理生化直至分子的各个水平。 各国的科学家也为此做了大量的工作, 并取得了很多 新进展, 特别在利用高等模式植物拟南芥来研究植物的耐盐分子机理方面, 使该领域 的研究有了突破性的进展 (Zhu JK. 2002. Salt and drought stress singal transduction in plants. Annu. Rev. Plant Biol. 53 : 1247- 1273 ; Zhang ZL. 201 1. Arabidopsis Floral Initiator SKB 1 Confers High Salt Tolerance by Regulating Transcription and Pre-mRNA Splicing through Altering Histone H4R3 and Small Nuclear Ribonucleoprotein LSM4 Methylation. Plant Cell, 23 : 396-41 1 ) 。 高等植物细胞可通过多种途径感受外界环境中物化参数的 变化, 从而将胞外的信号转化为胞内信号, 通过系列的信号传导最后将胁迫信号传递 至细胞核内, 激活转录因子, 而被激活的转录因子再作用于功能基因, 启动逆境应答 基因的表达从而提高植物的耐逆性。 尽管研究者已从不同侧面开展了大量研究, 但由 于其机制十分复杂, 植物抗盐中的许多重要问题仍有待探索。 例如, 植物抗盐的关键 因子仍未找到; 植物耐盐的分子机制并不十分清楚 ( The salt tolerance of plants is a very complex quantitative trait, and its salt tolerance mechanism involves various levels from plants to organs, tissues, physiology and biochemistry to molecules. Scientists from various countries have also done a lot of work for this purpose, and have made a lot of new progress, especially in the use of the higher model plant Arabidopsis to study the salt-tolerant molecular mechanism of plants, making breakthroughs in research in this field ( Zhu JK. 2002. Salt and drought stress singal transduction in plants. Annu. Rev. Plant Biol. 53 : 1247- 1273 ; Zhang ZL. 201 1. Arabidopsis Floral Initiator SKB 1 Confers High Salt Tolerance by Regulating Transcription and Pre-mRNA Splicing Through Altering Histone H4R3 and Small Nuclear Ribonucleoprotein LSM4 Methylation. Plant Cell, 23 : 396-41 1 ). Higher plant cells can sense changes in physicochemical parameters in the external environment through various pathways, thereby converting extracellular signals into intracellular signals, and finally transmitting stress signals to the nucleus through a series of signal transductions, activating transcription factors, and being activated. The transcription factor acts on the functional gene and initiates the expression of the stress response gene to increase the tolerance of the plant. Although researchers have conducted a large number of studies from different sides, due to the complexity of the mechanism, many important issues in plant salt resistance remain to be explored. For example, the key to plant salt resistance The factor has not been found; the molecular mechanism of plant salt tolerance is not very clear (
发明内容 本发明人利用 SSH (抑制差减杂交) 与 RACE ( cDNA末端快速扩增) 相结合的 方法克隆了棉花的一个 ATP水解酶 (本文命名为 ATPase-2 ) 的编码基因, 并测定了 其 DNA序列。 并且发现通过转基因技术将其导入植株后, 可明显改善转基因植株的 耐盐性, 而且这些性状可稳定遗传。 SUMMARY OF THE INVENTION The present inventors cloned a coding gene for an ATP hydrolase (designated herein as ATPase-2) of cotton using SSH (Suppression Subtractive Hybridization) in combination with RACE (rapid amplification of cDNA ends), and determined its DNA sequence. Moreover, it was found that the transgenic plants can significantly improve the salt tolerance of the transgenic plants after they are introduced into the plants by transgenic technology, and these traits can be stably inherited.
本发明第一方面提供棉花的一个 ATP水解酶 ATPase-2的编码基因 (本文命名为 GhA TPase-2 ) , 其序列为 SEQ ID NO: 2。 The first aspect of the present invention provides an ATP hydrolase ATPase-2 encoding gene (designated herein as GhA TPase-2) of cotton, the sequence of which is SEQ ID NO: 2.
本发明第二方面提供一种重组表达载体, 其含有本发明第一方面所述的基因, 其是通过所述基因插入到一种表达载体而获得的, 并且所述基因的核苷酸序列与所 述重组表达载体的表达控制序列可操作地连接; 优选地, 所述表达载体是 pCAMBIA2300 ; 优选地, 所述重组表达载体为附图 2所示的 35 S-GhATPase-2-2300载 体。 A second aspect of the present invention provides a recombinant expression vector comprising the gene of the first aspect of the present invention, which is obtained by inserting the gene into an expression vector, and the nucleotide sequence of the gene is The expression control sequence of the recombinant expression vector is operably linked; preferably, the expression vector is pCAMBIA2300 ; preferably, the recombinant expression vector is the 35 S-GhATPase-2-2300 vector shown in Figure 2.
本发明第三方面提供一种重组细胞, 其含有本发明第一方面所述的基因或者本 发明第二方面所述的重组表达载体; 优选地, 所述重组细胞为重组农杆菌细胞。 A third aspect of the invention provides a recombinant cell comprising the gene of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention; preferably, the recombinant cell is a recombinant Agrobacterium cell.
本发明第四方面提供一种改善植物耐盐性的方法, 包括: 将本发明第一方面所 述基因或者本发明第二方面所述的重组表达载体导入植物或植物组织并使所述基因 表达; 优选地, 所述植物是拟南芥。 A fourth aspect of the invention provides a method for improving salt tolerance of a plant, comprising: introducing the gene of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention into a plant or plant tissue and expressing the gene Preferably, the plant is Arabidopsis thaliana.
本发明第五方面提供一种制备转基因植物的方法, 包括: 在有效产生植物的条 件下培养含有本发明第一方面所述基因或者本发明第二方面所述的重组表达载体的 植物或植物组织; 优选地, 所述植物是拟南芥。 A fifth aspect of the invention provides a method for producing a transgenic plant, comprising: cultivating a plant or plant tissue comprising the gene of the first aspect of the invention or the recombinant expression vector of the second aspect of the invention under conditions effective to produce a plant Preferably, the plant is Arabidopsis thaliana.
本发明第六方面提供本发明第一方面所述的基因、 本发明第二方面所述的重组 表达载体或者本发明第三方面所述的重组细胞用于改善植物耐盐性以及用于植物育 种的用途; 优选地, 所述植物是拟南芥。 A sixth aspect of the present invention provides the gene according to the first aspect of the present invention, the recombinant expression vector of the second aspect of the present invention or the recombinant cell of the third aspect of the present invention for improving salt tolerance of a plant and for use in plant breeding Use; Preferably, the plant is Arabidopsis thaliana.
本发明第七方面提供由本发明第一方面所述的基因编码的蛋白质, 其氨基酸序 列如 SEQ ID NO : 1所示。 附图说明 A seventh aspect of the invention provides the protein encoded by the gene of the first aspect of the invention, the amino acid sequence of which is set forth in SEQ ID NO: 1. DRAWINGS
图 1是 GhATPsae-2基因的植物表达载体 ( 35S-GhATPase-2-2300 ) 构建流程 (图 la-lb) 。 Figure 1 shows the construction of the plant expression vector (35S-GhATPase-2-2300) of the GhATPsae-2 gene (Fig. la-lb).
图 2是 GhATPase-2基因的植物表达载体 (35S-GhATPase-2-2300 ) 的质粒图。 Figure 2 is a plasmid map of the plant expression vector (35S-GhATPase-2-2300) of the GhATPase-2 gene.
图 3是转 GhATPase-2基因的的 T 1代拟南芥植株的耐盐实验结果, Tli5表现 出明显的耐盐性, T lil3、 T 1U6的结果与其类似, 在此未示出。 Fig. 3 shows the results of salt tolerance test of T1 Arabidopsis thaliana plants transgenic with GhATPase-2 gene. Tli5 showed significant salt tolerance, and the results of Tlil3 and T1U6 were similar thereto, and are not shown here.
图 4 为利用反转录 PCR 对 1\代转基因拟南芥植株和非转基因对照植株中 GhATPase-2 基因的转录水平进行分子水平检测的结果。 M 为 DNA Ladder Marker ( DL2000 ) , 1-8为耐盐 T1代转基因拟南芥植株 (分别属于 Tli5、 Tlil3、 Tlil6三 个株系), 9为质粒 PCR阳性对照 (35S-GhATPase-2-2300质粒) , 10-13为非转基因 对照拟南芥植株, 。 Figure 4 shows the results of molecular level detection of the transcription level of GhATPase-2 gene in 1\ generation transgenic Arabidopsis plants and non-transgenic control plants by reverse transcription PCR. M is DNA Ladder Marker ( DL2000 ), 1-8 is salt-tolerant T1 transgenic Arabidopsis plants (Tli5, Tlil3, Tlil6, respectively), 9 is a plasmid PCR positive control (35S-GhATPase-2-2300) Plasmid), 10-13 is a non-transgenic control Arabidopsis plant.
具体实施方式 提供以下实施例, 以方便本领域技术人员更好地理解本发明。 所述实施例仅出 于示例性目的, 并非意在限制本发明的范围。 BEST MODE FOR CARRYING OUT THE INVENTION The following examples are provided to facilitate a better understanding of the present invention by those skilled in the art. The examples are for illustrative purposes only and are not intended to limit the scope of the invention.
下面实施例中提到的未注明来源的限制性内切酶均购自 New England Biolabs公司。 实施例 1. 盐胁迫下棉花 SSH文库构建: The unrecognized restriction enzymes mentioned in the examples below were purchased from New England Biolabs. Example 1. Cotton SSH library construction under salt stress:
具体方法为: The specific method is:
按照 Clontech公司的 PCR-selectTM cDNA Subtraction Kit试剂盒说明书所示的方法 通过抑制差减杂交方法构建 SSH文库(抑制差减文库) 。 在实验过程中以盐处理的棉 花根组织中提取的 mRNA作为样本(Tester) , 以未处理的棉花根组织中提取的 mRNA 作为对照 (Driver) 。 具体步骤如下: A method according to PCR-select TM cDNA Clontech kit Subtraction Kit's instructions shown by suppression subtractive hybridization libraries constructed SSH (suppression subtractive library). The mRNA extracted from the cotton root tissue treated with salt was used as a sample (Tester) during the experiment, and the mRNA extracted from the untreated cotton root tissue was used as a control. Specific steps are as follows:
( 1 ) 供试材料: (1) Test materials:
非洲棉 (国家棉花中期库, 获取单位中国棉花研究所, 统一编号: ZM-06838 ) 播 种到灭过菌的蛭石上, 在 25 °C、 光暗周期 16h/8h条件下培养, 每周浇 1/2MS培养基 ( 9. 39 mM KN03, 0. 625 mM KH2P04, 10. 3 mM NH4N03, 0. 75 mM MgS04, 1. 5 mM CaCl2, 50 μ M KI , 100 μ M H3B03 , 100 μ M MnS04, 30 μ M ZnS04, 1 μ M Na2Mo04, 0. 1 μ M CoCl2, 100 μ M Na2EDTA, 100 μ M FeS04) 一次。 当苗株长高达 25-30 cm时用于实验。 African cotton (National Cotton Medium Term Bank, obtained by the China Cotton Research Institute, Uniform No.: ZM-06838) Seeded on sterilized vermiculite, cultured at 25 °C, light dark cycle 16h/8h, poured 1 per week /2MS medium ( 9. 39 mM KN0 3 , 0. 625 mM KH2P0 4 , 10. 3 mM NH 4 N0 3 , 0.75 mM MgS0 4 , 1. 5 mM CaCl 2 , 50 μ M KI , 100 μ MH 3 B0 3 , 100 μ M MnS0 4 , 30 μ M ZnS0 4 , 1 μ M Na 2 Mo0 4 , 0. 1 μ M CoCl 2 , 100 μ M Na 2 EDTA, 100 μ M FeS0 4 ) once. It was used for experiments when the seedlings were as long as 25-30 cm.
( 2 ) 材料处理: (2) Material handling:
将供试幼苗分为 2组, 每组 4株。 第一组为对照组, 在 25 °C、 光照下培养, 放置 到 1/2MS液体培养基中。 第二组为处理组, 25 °C、 光照下培养, 放置到添加有终浓度 为 200 mM NaCl的 1/2MS液体培养基中, 处理 6小时, 处理完毕后及时剪取两组幼苗 的根, 用液氮迅速冷冻后, 于 -70 °C冰箱中保存。 The test seedlings were divided into 2 groups of 4 plants each. The first group was a control group, cultured at 25 ° C under light, and placed in 1/2 MS liquid medium. The second group was treated with 25 °C, light culture, placed in 1/2 MS liquid medium supplemented with a final concentration of 200 mM NaCl, and treated for 6 hours. After the treatment, the roots of the two groups were cut out in time. After rapid freezing with liquid nitrogen, it was stored in a -70 °C refrigerator.
( 3 ) 总 RNA提取: (3) Total RNA extraction:
分别取对照组和盐处理组的棉花根 0.5 g, 用植物 RNA 提取试剂盒 (购自 Invitrogen)提取总 RNA。 用 HITACHI公司的紫外分光光度计 U-2001测定所得总 RNA 在 260 nm和 280 nm的吸光度值, OD26。/OD28。比值为 1.8-2.0, 表明总 RNA纯度较 高, 用 1.0%的琼脂糖凝胶电泳检测总 RNA的完整性, 28S条带的亮度约为 18S条带 的 2倍, 表明 RNA的完整性良好。 使用 Qiagen公司的 Oligotex mRNA纯化试剂盒(从 总 RNA中纯化 polyA+ RNA) 分离 mRNA。 0.5 g of cotton roots of the control and salt treatment groups were taken, and total RNA was extracted using a plant RNA extraction kit (purchased from Invitrogen). The absorbance of total RNA at 260 nm and 280 nm, OD 26 , was determined using a HITACHI UV spectrophotometer U-2001. /OD 28 . The ratio of 1.8-2.0 indicates that the total RNA purity is high. The integrity of total RNA is detected by 1.0% agarose gel electrophoresis. The brightness of the 28S band is about twice that of the 18S band, indicating that the RNA integrity is good. mRNA was isolated using Qiagen's Oligotex mRNA Purification Kit (purified polyA+ RNA from total RNA).
( 4 ) 抑制差减杂交: (4) Suppression of subtractive hybridization:
按 Clontech公司的 PCR-selectTM cDNA Subtraction Kit试剂盒说明书所示的方法进 行抑制差减杂交。 先将 Driver mRNA和 Tester mRNA分别反转录, 得到双链 cDNA, 再以 2 μ g Tester cDNA和 2 μ g Driver cDNA作为起始材料进行差减杂交。 在 37°C水 浴下分别将 Tester cDNA和 Driver cDNA用 Rsa I酶切 1.5小时, 然后将酶切后的 Tester cDNA分成两等份, 连接上不同的接头, 而 Driver cDNA不连接头。 两种连有不同 接头的 Tester cDNA分别与过量的 Driver cDNA混合, 进行第一次正向差减杂交。 将 两种第一次正向差减杂交的产物混合, 再与新变性的 Driver cDNA进行第二次正向 差减杂交, 通过两次抑制性 PCR扩增富集差异表达基因的片段 (PCR进行前, 第二 次正向差减杂交产物进行末端补平) 。 The method according to Clontech's PCR-select TM cDNA Subtraction Kit kit instructions will be shown suppression subtractive hybridization. Driver mRNA and Tester mRNA were reverse transcribed, respectively, to obtain double-stranded cDNA, and 2 μg of Tester cDNA and 2 μg of Driver cDNA were used as starting materials for subtractive hybridization. The Tester cDNA and Driver cDNA were digested with Rsa I for 1.5 hours in a 37 ° C water bath, and then the digested Tester cDNA was divided into two equal portions, and the different linkers were ligated, and the Driver cDNA was not ligated. Two tester cDNAs with different adaptors were mixed with excess Driver cDNA for the first forward subtractive hybridization. The products of the two first forward subtractive hybridizations were mixed, and a second forward subtractive hybridization was performed with the newly denatured Driver cDNA, and the differentially expressed genes were amplified by two inhibitory PCR amplifications (PCR). Before, the second forward subtraction hybridization product was end-filled).
( 5 ) 差减文库的构建与初步筛选、 克隆、 鉴定 (5) Construction and preliminary screening, cloning and identification of subtractive libraries
依照 pGEM-T Easy试剂盒(购自 Promega) 的说明书, 将所述第二次正向差减杂 交 cDNA片段的第二次抑制性 PCR扩增产物 (使用 QIAquick PCR Purification Kit纯 化, 购自 Qiagen)与 pGEM-T Easy载体连接, 其具体步骤如下: 在 200 μ 1 PCR管中 依次加入下列成分: 纯化的合并后的正向差减杂交 cDNA 片段的第二次抑制性 PCR 产物 3 μ 1、 2 X T4 DNA连接酶缓冲液 5 μ 1、 pGEM-T Easy载体 1 μ 1、 Τ4 DNA连接 酶 1 μ 1, 于 4°C连接过夜。 然后取 10 μ ΐ连接反应产物, 加入到 100 μ 1感受态大肠 杆菌 JM109感受态细胞 (购自 TAKARA) 中, 冰浴 30分钟、 热休克 60秒、 冰浴 2 分钟, 然后加入 250 μ 1 LB液体培养基(含有 1%胰蛋白胨(Tryptone,购自 OXOID)、 0.5%酵母提取物(Yeast Extract, 购自 OXOID )禾 P 1% NaCl (购自国药))后置于 37°C 摇床中, 以 225 rpm振荡培养 30分钟, 然后从中取 200 μ 1菌液接种于含 50 μ g/ml 氨苄青霉素、 40 Qg/mL X-gal ( 5-溴 -4氯 -3-吲哚 - β -D-半乳糖苷) 、 24 g/mL IPTG (异 丙基 - β -D-硫代吡喃半乳糖苷)(X-gal/IPTG均购自 TAKARA) LB (同上) 固体培养板 上, 37°C培育 18小时。 计数培养板中直径 > 1 mm的清晰白色及蓝色菌落, 随机挑取 300 个白色菌落 (编号: Gh-S2-001 至 Gh-S2-300 ) 。 将所挑取白色菌落分别接种于 96孔细胞培养板(CORNING) 中的含 50 μ g/ml氨苄青霉素的 LB液体培养基(同上) 中, 37 °C培养过夜后加甘油至甘油终浓度为 20% (体积比) , 然后于 - 80°C保存备 The second inhibitory PCR amplification product of the second forward subtractive hybridization cDNA fragment (purified using QIAquick PCR Purification Kit, purchased from Qiagen) according to the instructions of the pGEM-T Easy kit (purchased from Promega) The specific steps are linked to the pGEM-T Easy vector as follows: The following components are sequentially added to the 200 μl PCR tube: Purified combined positive subtractive hybridization cDNA fragment of the second inhibitory PCR product 3 μ 1 , 2 X T4 DNA ligase buffer 5 μl, pGEM-T Easy vector 1 μl, Τ4 DNA ligase 1 μl, ligated overnight at 4 °C. Then take 10 μ ΐ to connect the reaction product and add to the 100 μ 1 competent colon Bacillus JM109 competent cells (purchased from TAKARA), ice bath for 30 minutes, heat shock for 60 seconds, ice bath for 2 minutes, then add 250 μl of LB liquid medium (containing 1% tryptone (purchased from OXOID), 0.5% yeast extract (Yeast Extract, purchased from OXOID) and P 1% NaCl (purchased from Sinopharm) were placed in a 37 ° C shaker, shaken at 225 rpm for 30 minutes, and then 200 μl of the bacterial solution was taken therefrom. Inoculated with 50 μg/ml ampicillin, 40 Qg/mL X-gal (5-bromo-4-chloro-3-indolyl-β-D-galactoside), 24 g/mL IPTG (isopropyl- β-D-thiogalactopyranoside (X-gal/IPTG was purchased from TAKARA) LB (ibid.) was cultured on a solid plate for 18 hours at 37 °C. Count the clear white and blue colonies with a diameter > 1 mm in the culture plate and randomly pick 300 white colonies (number: Gh-S2-001 to Gh-S2-300). The white colonies picked were inoculated into LB liquid medium (same as above) containing 50 μg/ml ampicillin in 96-well cell culture plate (CORNING), and cultured overnight at 37 °C, and glycerol was added to the final concentration of glycerol. 20% (by volume), then keep at -80 °C
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用。 使用巢式 PCR弓 I物 Primer 1和 Primer 2R(来自 Clontech公司的 PCR-selectTM cDNA Subtraction Kit试剂盒) 对培养得到的菌液分别进行 PCR扩增验证, 共验证 231个阳 use. Nested PCR primers Primer 1 and Primer 2R (PCR-select TM cDNA Subtraction Kit from Clontech) were used to verify the bacteriological activity of the cultured bacteria.
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性克隆, 然后将所有阳性克隆送英潍捷基 (上海) 贸易 r、有限公司测序。 Sex clones, and then all positive clones were sent to Yingjie Jieji (Shanghai) Trade r, Ltd. for sequencing.
( 6 ) 差异克隆的 cDNA测序分析: (6) cDNA sequencing analysis of differential clones:
将 DNA测序结果去除载体和不明确序列及冗余的 cDNA后 i.- , 共得到 203个有效 表达序列标签 (Expressed sequence tag, EST ) ( Unigene ) After the DNA sequencing results were removed from the vector and the ambiguous sequence and the redundant cDNA i.- , a total of 203 Expressed sequence tags ( EST ) ( Unigene ) were obtained .
i.- 实施例 2棉花 ATP水解酶基因 GhATPase-2的克隆 I.- Example 2 Cotton ATP hydrolase gene GhATPase-2 clone
将所述鉴定的棉花 SSH文库中来自菌落 Gh-S2-176的克隆子去掉冗余 DNA后, 序 列为 SEQ ID No: 3, 序列分析表明该序列编码的蛋白属于 ATP水解酶。 本文将 SEQ ID No : 3 序列对应的全长编码基因命名为 GhATPase-2, 其对应的蛋白命名为 ATPase-2 o After the cloned from the colony Gh-S2-176 in the identified cotton SSH library was detached from the redundant DNA, the sequence was SEQ ID No: 3. Sequence analysis indicated that the protein encoded by the sequence belonged to the ATP hydrolase. In this paper, the full-length coding gene corresponding to the sequence of SEQ ID No: 3 was named GhATPase-2, and its corresponding protein was named ATPase-2 o.
SEQ ID No: 3 SEQ ID No: 3
1 ACTGTTTATA AGCCAAACTC TAGATCACTT ΓΡ ΠΑΑΑΤΤΤ CTGGTAGTCC AACTGAGAAA 1 ACTGTTTATA AGCCAAACTC TAGATCACTT ΓΡ ΠΑΑΑΤΤΤ CTGGTAGTCC AACTGAGAAA
61 CTTGGGCTGT CTCAGATTTG GGGATGAACC TAGATGACCC AAAGCAAAAC61 CTTGGGCTGT CTCAGATTTG GGGATGAACC TAGATGACCC AAAGCAAAAC
121 TACGAACTCA TCCAAGTAGA TCAGAGAAGA AGAGGAGTGG AGTTCTGATA121 TACGAACTCA TCCAAGTAGA TCAGAGAAGA AGAGGAGTGG AGTTCTGATA
181 GTGAGAGTGG CGGTGCTACA GGA GGGTGC TGCTGAGATG181 GTGAGAGTGG CGGTGCTACA GGA GGGTGC TGCTGAGATG
241 ATCTTGGCCA ATATTATGAT AGAAGTGGTG TAGTT ^GC CATTGACGAG241 ATCTTGGCCA ATATTATGAT AGAAGTGGTG TAGTT ^GC CATTGACGAG
301 TAGAGATGGG GAGGATATGG CAGCCAAAAG 301 TAGAGATGGG GAGGATATGG CAGCCAAAAG
361 ATAGCATTTG CACACACACA AAATCCAAAA GACAATGAAC GAGTTTTGCA AGA^ GTGGA 361 ATAGCATTTG CACACACACA AAATCCAAAA GACAATGAAC GAGTTTTGCA AGA^ GTGGA
421 CTCATCTTGC TAGGGCTGGT AGGTTTGA^A CAGAAAAGCA421 CTCATCTTGC TAGGGCTGGT AGGTTTGA^A CAGAAAAGCA
481 GTAGAAGGTT GCATAAATGC ATCAAGAT A CAATATCTTC481 GTAGAAGGTT GCATAAATGC ATCAAGAT A CAATATCTTC
541 GTATAGCAAG CGAATGAGGA TTTGAGGGAA 601 GCTGTAATAG AAGGTGT 541 GTATAGCAAG CGAATGAGGA TTTGAGGGAA 601 GCTGTAATAG AAGGTGT
GhATPase-2全长编码基因的克隆 Cloning of the full-length coding gene of GhATPase-2
根据已经获得的 SEQ ID No: 3序列, 设计如下两条特异性引物, 作为 3 ' RACE 的 5 ' 端特异性引物。 Based on the sequence of SEQ ID No: 3 that has been obtained, the following two specific primers were designed as the 5'-end specific primer for 3' RACE.
GhATPase-2 GSP1 : SEQ ID No: 4: GhATPase-2 GSP1 : SEQ ID No: 4:
GTAGAAGCTT GCATAAATGC TG GhATPase-2 GSP2: SEQ ID No: 5: GTAGAAGCTT GCATAAATGC TG GhATPase-2 GSP2: SEQ ID No: 5:
ACAGCAAAGG CTATAGCAAC TGA ACAGCAAAGG CTATAGCAAC TGA
实验步骤按试剂盒说明书操作 ( 3 ' RACE System for Rapid Amplification of cDNA Ends试剂盒购自 Invitrogen公司) 。 The experimental procedure was performed according to the kit instructions (3 'RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen).
用 SEQ ID NO: 4 与通用引物 AUAP (试剂盒自带) , 以盐处理组棉花提取的 mRNA反转录得到的 cDNA为模板进行第一轮 PCR扩增。 具体步骤如下: The first round of PCR amplification was carried out using SEQ ID NO: 4 and the universal primer AUAP (provided with the kit), and the cDNA obtained by reverse transcription of the mRNA extracted from the salt-treated group was used as a template. Specific steps are as follows:
50 μ 1 PCR反应体系: 5 μ 1 ΙΟ Χ Εχ Buffer 3 μ 1 2.5 mM 的 dNTP、 2.0 μ 1 cDNA、 1.0 μ 1 Ex Taq (购自 TAKARA) 、 10 μ M的引物 SEQ ID NO: 4和 AUAP各 2.0 μ ΐ以及 35 μ ΐ 双蒸水。 PCR反应条件: 94°C预变性 5分钟, 33个循环(94°C变 性 30秒, 58 °C退火 30秒, 72°C延伸 2分钟) , 72°C延伸 10分钟。 50 μ 1 PCR reaction system: 5 μ 1 ΙΟ Χ Εχ Buffer 3 μ 1 2.5 mM dNTP, 2.0 μ 1 cDNA, 1.0 μ 1 Ex Taq (purchased from TAKARA), 10 μM primers SEQ ID NO: 4 and AUAP Each 2.0 μ ΐ and 35 μ ΐ double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (94 ° C for 30 seconds, 58 ° C for 30 seconds, 72 ° C for 2 minutes), 72 ° C for 10 minutes.
将所得的 PCR产物用双蒸水稀释 50倍后取 2.0 μ ΐ作为模板, 用 SEQ ID NO: 5 与通用引物 AUAP进行第二轮 PCR扩增, 具体步骤如下: The obtained PCR product was diluted 50-fold with double distilled water, and 2.0 μL was used as a template, and the second round of PCR amplification was carried out by using SEQ ID NO: 5 and the universal primer AUAP. The specific steps are as follows:
50 y l PCR反应体系: 5 μ 1 lO X Ex Buffer 3 μ 1 2.5 mM的 dNTP、 2.0 μ 1稀释 的第一轮 PCR产物、 1.0 μ 1 Ex Taq 10 μ M的引物 SEQ ID NO: 5禾 P AUAP各 2.0 μ 1以及 35 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5分钟, 33个循环(94°C变性 30秒, 58 °C退火 30秒, 72°C延伸 2分钟) , 72°C延伸 10分钟。 50 yl PCR reaction system: 5 μ 1 lO X Ex Buffer 3 μ 1 2.5 mM dNTP, 2.0 μl diluted first round PCR product, 1.0 μ 1 Ex Taq 10 μM primer SEQ ID NO: 5 and P AUAP Each of 2.0 μ 1 and 35 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
回收第二轮 PCR 产物中片段约为 1300 bp 的条带 (Gel Extraction Kit 购自 OMEGA), 并将其连接于 pGEM-T Easy载体, 然后转化到大肠杆菌 JM109感受态细 胞中 (具体方法同上), 并将转化后的菌液涂布于含 50 g/mL氨苄青霉素、 40 ^glmL X-gaK 24 g/mL IPTG的 LB固体培养基上进行筛选。 随机挑取 10个白色菌落分别接种 于含有 50 g/ml氨苄青霉素的 LB液体培养基中, 37°C培养过夜后加甘油至甘油终 浓度为 20% (体积比) , -80°C保存备用。 用 SEQ ID NO: 5与通用引物 AUAP进行 菌液 PCR扩增验证, 得 4个阳性克隆, 将 4个阳性克隆送至英潍捷基 (上海) 贸易 有限公司测序测序, 获得该基因的 cDNA的 3 ' 端。 A 1300 bp fragment (Gel Extraction Kit from OMEGA) in the second round of PCR product was recovered and ligated into pGEM-T Easy vector, and then transformed into E. coli JM109 competent cells (specific method as above) The transformed bacterial solution was applied to LB solid medium containing 50 g/mL ampicillin and 40 μgmL X-gaK 24 g/mL IPTG for screening. 10 white colonies were randomly picked and inoculated into LB liquid medium containing 50 g/ml ampicillin, and cultured overnight at 37 ° C, glycerol was added to a final concentration of glycerol of 20% (volume ratio), and stored at -80 ° C. . Using SEQ ID NO: 5 with the universal primer AUAP The PCR amplification of the bacterial solution confirmed that 4 positive clones were obtained, and 4 positive clones were sent to Yingjie Jieji (Shanghai) Trading Co., Ltd. for sequencing and sequencing, and the 3' end of the cDNA of the gene was obtained.
根据已经获得的 GhATPase-2 基因片段, 设计如下三条特异性引物, 作为 5 ' RACE的 3 ' 端特异性引物。 Based on the obtained GhATPase-2 gene fragment, the following three specific primers were designed as the 3'-end specific primer of 5 ' RACE.
GhATPase-2 GSP3: SEQ ID No: 6: GhATPase-2 GSP3: SEQ ID No: 6:
ATCATAATAT TGTGAGCACA TG ATCATAATAT TGTGAGCACA TG
GhATPase-2GSP4: SEQ ID No: 7: GhATPase-2GSP4: SEQ ID No: 7:
GGTTCATCCC CAAATCTGAG AC GGTTCATCCC CAAATCTGAG AC
GhATPase-2 GSP5 : SEQ ID No: 8: GhATPase-2 GSP5 : SEQ ID No: 8:
GGACTACCAG AAATTTCAGG AAG 实验步骤按试剂盒说明书操作 ( 5 ' RACE System for Rapid Amplification of cDNA Ends试剂盒购自 Invitrogen公司) 。 The GGACTACCAG AAATTTCAGG AAG test procedure was performed according to the kit instructions (5 'RACE System for Rapid Amplification of cDNA Ends kit purchased from Invitrogen).
用 SEQ ID NO: 7与通用引物 AAP (试剂盒自带), 以盐处理组棉花提取的 mRNA 反转录得到的 cDNA (反转录引物 SEQ ID NO: 6, dCTP加尾) 为模板进行第一轮 PCR扩增, 具体步骤如下: Using SEQ ID NO: 7 and the universal primer AAP (provided with the kit), the cDNA obtained by reverse transcription of the mRNA extracted from the salt-treated group (reverse transcription primer SEQ ID NO: 6, dCTP plus tail) was used as a template. One round of PCR amplification, the specific steps are as follows:
50 μ 1 PCR反应体系: 5 μ 1 ΙΟ Χ Εχ Buffer 3 μ 1 2.5 mM 的 dNTP、 2.0 μ 1 cDNA、 1.0 μ 1 Ex Taq (购自 TAKARA) 、 10 μ M的引物 SEQ ID NO: 7和 AAP各 2.0 μ 1以及 35 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5分钟, 33个循环 (94°C 变性 30秒, 55 °C退火 30秒, 72°C延伸 2分钟) , 72°C延伸 10分钟。 50 μ 1 PCR reaction system: 5 μ 1 ΙΟ Χ Εχ Buffer 3 μ 1 2.5 mM dNTP, 2.0 μ 1 cDNA, 1.0 μ 1 Ex Taq (purchased from TAKARA), 10 μM primers SEQ ID NO: 7 and AAP Each of 2.0 μ 1 and 35 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 55 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
将所得的 PCR产物用双蒸水稀释 50倍后取 2.0 μ ΐ作为模板, 用 SEQ ID NO: 8 与引物 AUAP进行第二轮 PCR扩增, 具体步骤如下: The obtained PCR product was diluted 50 times with double distilled water, and 2.0 μ ΐ was used as a template, and the second round of PCR amplification was carried out by using SEQ ID NO: 8 and the primer AUAP. The specific steps are as follows:
50 l PCR反应体系: 5 μ 1 lO X Ex Buffer 3 μ 1 2.5 mM的 dNTP、 2.0 μ 1稀释 的第一轮 PCR产物、 1.0 μ 1 Ex Taq 10 μ M的引物 SEQ ID NO: 8禾 P AUAP各 2.0 μ 1以及 35 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5分钟, 33个循环(94°C变性 30秒, 58 °C退火 30秒, 72°C延伸 2分钟) , 72°C延伸 10分钟。 50 l PCR reaction system: 5 μ 1 lO X Ex Buffer 3 μ 1 2.5 mM dNTP, 2.0 μl diluted first round PCR product, 1.0 μ 1 Ex Taq 10 μM primer SEQ ID NO: 8 and P AUAP Each of 2.0 μ 1 and 35 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes.
回收第二轮 PCR 产物中片段约为 1700 bp 的条带 (Gel Extraction Kit 购自 OMEGA) , 并将其连接于 pGEM-T Easy载体, 然后转化到大肠杆菌 JM109感受态细 胞中 (具体方法同上), 并将转化后的菌液涂布于含 50 g/mL氨苄青霉素、 40 ^glmL X-gaK 24 g/mL IPTG的 LB固体培养基上进行筛选。 随机挑取 10个白色菌落分别接种 于含有 50 g/ml氨苄青霉素的 LB 液体培养基中, 37°C培养过夜后加甘油至甘油终浓 度为 20% (体积 c比), -80°C保存备用。 用 SEQ ID NO: 8与引物 AUAP进行菌液 PCR 扩增验证(反应体系及反应条件同上) , 得到 6个阳性克隆, 选取其中 4个克隆送至 英潍捷基 (上海) 贸易_) r有限公司测序, 获得该基因的 cDNA 的 5 ' 端。 所得的 A 2700 bp band (Gel Extraction Kit from OMEGA) was recovered from the second round of PCR product and ligated into pGEM-T Easy vector, which was then transformed into E. coli JM109. In the cells (the specific method is the same as above), the transformed bacterial solution was applied to LB solid medium containing 50 g/mL ampicillin and 40 μgmL X-gaK 24 g/mL IPTG for screening. Ten white colonies were randomly picked and inoculated in LB liquid medium containing 50 g/ml ampicillin. After incubation at 37 °C overnight, glycerol was added to a final concentration of glycerol of 20% (volume c ratio), and stored at -80 °C. spare. Using SEQ ID NO: 8 and primer AUAP for bacterial PCR amplification (reaction system and reaction conditions as above), 6 positive clones were obtained, and 4 clones were selected and sent to Yingjie Jieji (Shanghai) Trade _) r limited The company sequenced and obtained the 5' end of the cDNA of the gene. Income
['-- 5 'RACE产物克隆测序后广、,D将其与上述 3'RACE产物测序结果以及 SEQ ID ['-- 5 'RACE product was cloned and sequenced, and D was sequenced with the above 3' RACE product and SEQ ID
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No: 3序列进行拼接, 获得 G L JPove-2全长 cDNA序列 SEQ ID No: 9No: 3 sequence was spliced to obtain G L JPove-2 full-length cDNA sequence SEQ ID No: 9
1 CTTCTTTTAC TTCCTTTCCA TCACTCATAG TTTTAACCCT TCTTTCCTAC CGTTTTA¾CA1 CTTCTTTTAC TTCCTTTCCA TCACTCATAG TTTTAACCCT TCTTTCCTAC CGTTTTA3⁄4CA
61 TGTCGTTAAG ACACCGC^AC ACAGGTTACC TAGAACCAGC 、- GGAG^AGATA61 TGTCGTTAAG ACACCGC^AC ACAGGTTACC TAGAACCAGC, - GGAG^AGATA
121 CTCCA TAGT GA^ATGCCAG CACCGAAGGT GGCGTTCGGT ATATATTCTG121 CTCCA TAGT GA^ATGCCAG CACCGAAGGT GGCGTTCGGT ATATATTCTG
181 CCAGGATTTT TGTTTCTTTG T oTATCAACAA GAAACAGATA TTGCGTAGTC 181 CCAGGATTTT TGTTTCTTTG T oTATCAACAA GAAACAGATA TTGCGTAGTC
['-- ['--
241 TTTCCTACAT GTCCATGACA GTGACTCGAG TGATGATCGC 241 TTTCCTACAT GTCCATGACA GTGACTCGAG TGATGATCGC
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301 Tn-nTGTTGA TCAGAA^ CA > 301 T n-nTGTTGA TCAGAA^ CA >
361 GTAAACTTGG AGGCGTGAAA CAGATTGCTG ¾AGTCTTGA AACTGATAAG AAAGATGGTA 361 GTAAACTTGG AGGCGTGAAA CAGATTGCTG 3⁄4AGTCTTGA AACTGATAAG AAAGATGGTA
421 TCAGTGCTA TGAAGCTGAT GGGTCAATGT A麵TTCGGTGCC AACAGGTATC421 TCAGTGCTA TGAAGCTGAT GGGTCAATGT A side TTCGGTGCC AACAGGTATC
481 AGAAACCACC TA^AAAAAGC TTTT TAGCT TTGTTTATGA AGCTTT ¾AA GATACCACCA481 AGAAACCACC TA^AAAAAGC TTTT TAGCT TTGTTTATGA AGCTTT 3⁄4AA GATACCACCA
541 TTATCATACT CTTGGTTTGT CTCTGGGCTT TGGCATCAAA CAGCATGGCA541 TTATCATACT CTTGGTTTGT CTCTGGGCTT TGGCATCAAA CAGCATGGCA
601 TAACGGATGG GGTGGGAGTA GTTGTTGCTG601 TAACGGATGG GGTGGGAGTA GTTGTTGCTG
D D
661 AAGCAAAACA GACAATTCGA AAGGAGAGTA 661 AAGCAAAACA GACAATTCGA AAGGAGAGTA
721 GTGATATAAA AGTGGAAGTA GTGAGAGATG A TTA ATCA GTCTTTGAAG721 GTGATATAAA AGTGGAAGTA GTGAGAGATG A TTA ATCA GTCTTTGAAG
781 TGCTTGAAAA TTGGTGATGA AATTCGAGCG 781 TGCTTGAAAA TTGGTGATGA AATTCGAGCG
841 TCT GGA GG AAGGTGGATG AATGTAGCAT GACCGGTGAA ZiGCGACCATG 841 TCT GGA GG AAGGTGGATG AATGTAGCAT GACCGGTGAA ZiGCGACCATG
901 TTGAGATGAA TGGCAGCAAC TTCTTTCTGG TACAAAGGTC ACAAATGGGT901 TTGAGATGAA TGGCAGCAAC TTCTTTCTGG TACAAAGGTC ACAAATGGGT
961 TCGGTTCAAT TGAATACGGC A GGGGGGAG ZiTGATGAGTT961 TCGGTTCAAT TGAATACGGC A GGGGGGAG ZiTGATGAGTT
1021 CCA A^\CCG GAAGAAACTC TGGCCTCAAG AAGCTGACTT1021 CCA A^\CCG GAAGAAACTC TGGCCTCAAG AAGCTGACTT
1081 CTGCAAT GG GAAGA TGGA TCTTGGAGTG CTGCTTATTC1081 CTGCAAT GG GAAGA TGGA TCTTGGAGTG CTGCTTATTC
1141 'TGGAAACACA AAAGATGACC AGAATATAT CGAGGCAAGA 1141 'TGGAAACACA AAAGATGACC AGAATATAT CGAGGCAAGA
CAAAGTT GA CAGCA GATG AACTCAGTCG TGGAGATAAT TTCAGCAGCA AT ACCATCG CAAAGTT GA CAGCA GATG AACTCAGTCG TGGAGATAAT TTCAGCAGCA AT ACCATCG
1261 AATTCCAGAA GGTCTTCCTT TGGCAGTGAC CCTAACTTTG GCCTATTCTA 1261 AATTCCAGAA GGTCTTCCTT TGGCAGTGAC CCTAACTTTG GCCTATTCTA
1321 TGAAGCAAAT GATGGCTGAT TCAGA kCT TTCAGCTTGC GAGACGATGG1321 TGAAGCAAAT GATGGCTGAT TCAGA kCT TTCAGCTTGC GAGACGATGG
1381 GTTCAGCCAC AACAATCTGC ACAGATAAGA CAGGTACCCT TACTTTA ^A GAAATGAAGG1381 GTTCAGCCAC AACAATCTGC ACAGATAAGA CAGGTACCCT TACTTTA ^A GAAATGAAGG
"ϊ 4 1 TTATGGAGTT TTGGC AGGG AAAGAATTAA TTCCTCAGAA ATAGCACCTA"ϊ 4 1 TTATGGAGTT TTGGC AGGG AAAGAATTAA TTCCTCAGAA ATAGCACCTA
1501 ATG CCATAA GTTACTGCAA CAAGCGGTTG CTC CAACAC AACCGGTAC GTTTATAAGC1501 ATG CCATAA GTTACTGCAA CAAGCGGTTG CTC CAACAC AACCGGTAC GTTTATAAGC
1561 CAAACTC AG ATCAC TCCT GAAATTTCTG GTAGTCCAAC TGAGAAAGCA AT CTCTCTT1561 CAAACTC AG ATCAC TCCT GAAATTTCTG GTAGTCCAAC TGAGAAAGCA AT CTCTCTT
1621 GGGCTGTCTC AGATTTGGGG ATGAACCTAG ATGACCCAAA GCAi^-ACTAC GAACTCA CC1621 GGGCTGTCTC AGATTTGGGG ATGAACCTAG ATGACCCAAA GCAi^-ACTAC GAACTCA CC
1681 AAGTAGAGGC CTTCAATTCA GAGAAGAAGA GGAGTGGAGT TCTGA AAGG AGGAAGAGTG1681 AAGTAGAGGC CTTCAATTCA GAGAAGAAGA GGAGTGGAGT TCTGA AAGG AGGAAGAGTG
1741 AGAGTGGCGG TGCTACACAG AGGGTGCTGC TGAGATGATC TTGGCCATGT1741 AGAGTGGCGG TGCTACACAG AGGGTGCTGC TGAGATGATC TTGGCCATGT
1801 GCTCACAATA TTATGATAGA AGTGGTGTAG TTA AGCCAT TGACGAGGA , GAAAGAGTAG 1861 AGATGGGGAA AGTTATTGAG GATATGGCAG GCATTTGCAC1801 GCTCACAATA TTATGATAGA AGTGGTGTAG TTA AGCCAT TGACGAGGA , GAAAGAGTAG 1861 AGATGGGGAA AGTTATTGAG GATATGGCAG GCATTTGCAC
1921 ACACAC A ^ATGAACGAG TTTTG¾AGA AAGTGGACTC ATCTTGCTAG1921 ACACAC A ^ATGAACGAG TTTTG3⁄4AGA AAGTGGACTC ATCTTGCTAG
1981 TTTGAAAGAC CCATGTCGTC CTGGTGTCAG A AAGCAGTA GAAGCTTGCA1981 TTTGAAAGAC CCATGTCGTC CTGGTGTCAG A AAGCAGTA GAAGCTTGCA
2041 TAAATGCTGG AGT^A¾CATC ^AGATTAT^A CTGGAGACAA TATCTTCACA GC AAGGCTA2041 TAAATGCTGG AGT^A3⁄4CATC ^AGATTAT^A CTGGAGACAA TATCTTCACA GC AAGGCTA
21 01 TAGCAACTGA ATGTGGCATT TTGC^ACCCA A T GAGGAT T T GAGGGAAGCT GTAATAGAAG21 01 TAGCAACTGA ATGTGGCATT TTGC^ACCCA A T GAGGAT T T GAGGGAAGCT GTAATAGAAG
2161 GTGTACAGTT CCG^A¾TTAC TCACCAGAAG A^AGAATGGC TAAGATCAAC AA ATTTGTG2161 GTGTACAGTT CCG^A3⁄4TTAC TCACCAGAAG A^AGAATGGC TAAGATCAAC AA ATTTGTG
2221 TAATGGCCAG ATCCTCACCT TTTGACA^ C TTCTGATGGT ACAGTGTCTA AAGCAGAATG2221 TAATGGCCAG ATCCTCACCT TTTGACA^ C TTCTGATGGT ACAGTGTCTA AAGCAGAATG
2281 GTCATGTTGT AGCAGTCACT GGGGACGGCA CCAATGATGC ACCAGCTTTA AAGGAAGCAG2281 GTCATGTTGT AGCAGTCACT GGGGACGGCA CCAATGATGC ACCAGCTTTA AAGGAAGCAG
23 1 ATATTGGACT TTCGATGGGA ATCCAAGGAA CAGAAGTTGC CAAGGAAAGC TCAGACATA23 1 ATATTGGACT TTCGATGGGA ATCCAAGGAA CAGAAGTTGC CAAGGAAAGC TCAGACATA
2401 TCATTTTGGA TGATAACTTT ACTTCTGTGG TGACTGTTTT AAGGTGGGGT AGGTGTGTCT2401 TCATTTTGGA TGATAACTTT ACTTCTGTGG TGACTGTTTT AAGGTGGGGT AGGTGTGTCT
2461 TCAATAACAT TCAGAAATTC ATTCAGTTTC AGCTTACAGT GAATATAGCA GCACTAGTCA2461 TCAATAACAT TCAGAAATTC ATTCAGTTTC AGCTTACAGT GAATATAGCA GCACTAGTCA
2521 TCAACTTCAT TGCTGCAGTA TCTTCTGGTG A^ATCCCATT GACAGCAGTC CAACTATTGT2521 TCAACTTCAT TGCTGCAGTA TCTTCTGGTG A^ATCCCATT GACAGCAGTC CAACTATTGT
2581 GGGTGAACTT AATAATGGAT ACGT TGGGG CTTTAGCTTT GGCCACTGAG CGACCTACCA2581 GGGTGAACTT AATAATGGAT ACGT TGGGG CTTTAGCTTT GGCCACTGAG CGACCTACCA
2641 ATGATCTCAT GAC¾AAGCCA CCTGTGGGTC GATCCAAGCC CCTCATATCC AACATCATGT2641 ATGATCTCAT GAC3⁄4AAGCCA CCTGTGGGTC GATCCAAGCC CCTCATATCC AACATCATGT
2701 GGAGGAACCT CATTGCTCAA GCCTTGTATC AGGTTGCAGT TCTGCTAACC CTTCAGTTCA2701 GGAGGAACCT CATTGCTCAA GCCTTGTATC AGGTTGCAGT TCTGCTAACC CTTCAGTTCA
2761 GGGGAAAATT TATCT TGAT GTGGATAAAA AGGTCAATAA CACAC TATT TTGAACACTT2761 GGGGAAAATT TATCT TGAT GTGGATAAAA AGGTCAATAA CACAC TATT TTGAACACTT
2821 TTG CCTCTG GCAAGTGTT AATGAG'TTCA ATGCCAGAAA A C T T Gi-iAAAG AAGAATA'TAT2821 TTG CCTCTG GCAAGTGTT AATGAG'TTCA ATGCCAGAAA A C T T Gi-iAAAG AAGAATA'TAT
2881 TCCAGGGACT ACACAAGAAC AAACTCTTTC T/iGGGATCAT TGCCA AACC ATAATTCTTC2881 TCCAGGGACT ACACAAGAAC AAACTCTTTC T/iGGGATCAT TGCCA AACC ATAATTCTTC
2941 AAG GGTAAT GGTGGAATTC TTGAAGAGGT TTGGTAACAC TGAGAGGCTG AACTGGGGGC2941 AAG GGTAAT GGTGGAATTC TTGAAGAGGT TTGGTAACAC TGAGAGGCTG AACTGGGGGC
3001 AATGGGG AC TTGTA TGGA AT GCAGCTT TGTCCTGGGC ACTTGGCTGG CTAGTTAAGT3001 AATGGGG AC TTGTA TGGA AT GCAGCTT TGTCCTGGGC ACTTGGCTGG CTAGTTAAGT
3061 GGA TCCAGC ATGAAAAAAA ATCCTC TCT CGG CACAAG GGTTTTGCA CCAAAAAAAA3061 GGA TCCAGC ATGAAAAAAA ATCCTC TCT CGG CACAAG GGTTTTGCA CCAAAAAAAA
3121 T/iCCAGT AG CTCCAATGAG ATGCTCCTTT TCA TTATAT AGAACGTTAG GAATATCAGT3121 T/iCCAGT AG CTCCAATGAG ATGCTCCTTT TCA TTATAT AGAACGTTAG GAATATCAGT
3181 ATA AACCTT GGTACAATT'T CTTTTA TAT TCTAATGCAG TATTTTAAT TCCTTCTGTT3181 ATA AACCTT GGTACAATT'T CTTTTA TAT TCTAATGCAG TATTTTAAT TCCTTCTGTT
3241 CACTATT AT CTCGG TCTA GT CATTTTA AGAGTTGAAT TTGTAAGCTT CTATGTGAAC3241 CACTATT AT CTCGG TCTA GT CATTTTA AGAGTTGAAT TTGTAAGCTT CTATGTGAAC
3301 AATGAAGATA GTATGCAT 根据 SEQ ID NO: 9序列设计一对引物如下: 3301 AATGAAGATA GTATGCAT A pair of primers were designed according to the sequence of SEQ ID NO: 9 as follows:
SEQ ID No: 10: SEQ ID No: 10:
ATGTCGTTAA GACACCGCAA CA SEQ ID No: 11: ATGTCGTTAA GACACCGCAA CA SEQ ID No: 11:
TC ATGCTGGA ATCC ACTTAA CTA 通过 SEQ ID NO: 10和 SEQ ID NO: 11来克隆 G/L4 Pa -2全长编码基因。 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶, 以上述棉花的 cDNA为模板进行 PCR反应。 50 y l PCR反应体系: 10 y l 5 X PS Buffer、 3 μ 1 2.5 mM的 dNTP、 2.0 μ 1 cDNA 1.0 μ 1 PrimeSTAR HS DNA聚合酶、 10 μ M的引物 SEQ ID NO: 10和 SEQ ID NO: 11各 2.0 μ 1以及 30 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5分 钟, 33个循环 (94°C变性 30秒, 58 °C退火 30秒, 72 °C延伸 3分钟) , 72°C延伸 10 分钟。 TC ATGCTGGA ATCC ACTTAA CTA The G/L4 Pa-2 full-length coding gene was cloned by SEQ ID NO: 10 and SEQ ID NO: 11. The PCR reaction was carried out using the cDNA of the above cotton as a template using PrimeSTAR HS DNA polymerase of TaKaRa. 50 yl PCR reaction system: 10 yl 5 X PS Buffer, 3 μ 1 2.5 mM dNTP, 2.0 μ 1 cDNA 1.0 μ 1 PrimeSTAR HS DNA polymerase, 10 μM primers SEQ ID NO: 10 and SEQ ID NO: 11 Each of 2.0 μ 1 and 30 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 3 minutes), extension at 72 ° C 10 minute.
PCR扩增产物加 A尾: PCR产物中加入 2.5倍体积的无水乙醇, -20°C放置 10分 钟, 离心, 去上清, 晾干, 然后用 21 μΐ双蒸水溶解所得沉淀。 然后向其中加入 2.5 μ 1 lOXEx Buffer 0.5 μ 15 mM的 dATP、 1.0 lExTaq。 反应条件: 70°C反应 30分 钟。 将得到的约 3000 bp的 DNA片段回收(Omega回收试剂盒), 并将其连接至 pGEM T-easy载体上得到 GhATPase-2-pGEM质粒, 然后将连接产物转化大肠杆菌 JM109感 受态细胞中 (方法同上), 并将转化后的菌液涂布于含 50 g/mL氨苄青霉素、 40 g/mL X-gaK 24 g/mLIPTG的 LB固体培养基上进行筛选。 随机挑取 10个白色菌落分别接种 于含有 50 g/ml氨苄青霉素的 LB 液体培养基中, 37°C培养过夜后加甘油至甘油终 浓度为 20% (体积比), -80°C保存备用。 用 SEQ ID NO: 10与 SEQ ID NO: 11进行 菌液 PCR扩增验证 (反应体系及反应条件同上) , 得到 7个阳性克隆, 选取其中 4 个阳性克隆送至英潍捷基 (上海) 贸易有限公司测序, 所得序列为 SEQ ID NO: 2, 其编码的蛋白质的氨基酸序列为 SEQ ID NO: 1。 PCR amplification product plus A tail: 2.5 times the volume of absolute ethanol was added to the PCR product, placed at -20 ° C for 10 minutes, centrifuged, the supernatant was removed, air-dried, and the resulting precipitate was dissolved in 21 μl of double distilled water. Then, 2.5 μl of OXEx Buffer 0.5 μ 15 mM dATP, 1.0 lExTaq was added thereto. Reaction conditions: The reaction was carried out at 70 ° C for 30 minutes. The obtained DNA fragment of about 3000 bp was recovered (Omega recovery kit), and ligated into the pGEM T-easy vector to obtain a GhATPase-2-pGEM plasmid, and then the ligated product was transformed into E. coli JM109 competent cells (method) Same as above), and the transformed bacterial liquid was applied to LB solid medium containing 50 g/mL ampicillin and 40 g/mL X-gaK 24 g/mL IPTG for screening. 10 white colonies were randomly picked and inoculated in LB liquid medium containing 50 g/ml ampicillin. After incubation at 37 ° C overnight, glycerol was added to a final concentration of glycerol of 20% (volume ratio), and stored at -80 ° C. . Using SEQ ID NO: 10 and SEQ ID NO: 11 to verify the bacterial liquid PCR amplification (reaction system and reaction conditions as above), 7 positive clones were obtained, and 4 positive clones were selected and sent to Yingjiejie (Shanghai) Trade. Sequencing, the resulting sequence is SEQ ID NO: 2, and the amino acid sequence of the encoded protein is SEQ ID NO: 1.
ATPase-2蛋白的氨基酸序列: SEQ ID NO: 1 Amino acid sequence of ATPase-2 protein: SEQ ID NO: 1
1 SLRHRNTGY LEPA SDGED 1 SLRHRNTGY LEPA SDGED
21 TPIVKCQHRR WRSVFAAIYS 21 TPIVKCQHRR WRSVFAAIYS
41 ARIFVSLYKK IINKKQILRS 41 ARIFVSLYKK IINKKQILRS
61 LSYIALDVHD SDSSDDRLPS 61 LSYIALDVHD SDSSDDRLPS
81 LGVDQKTLTE VVREKSLETL 81 LGVDQKTLTE VVREKSLETL
101 SKLGGVKQIA ASLETDKKDG 101 SKLGGVKQIA ASLETDKKDG
121 ISANEADLAH RVNVFGANRY 121 ISANEADLAH RVNVFGANRY
141 QKPPKKSFFS FVYEAFKDTT 141 QKPPKKSFFS FVYEAFKDTT
161 IIILLVCAVL SLGFGIKQHG 161 IIILLVCAVL SLGFGIKQHG
181 ITDGGYDGGS IVIAVFLVVA 181 ITDGGYDGGS IVIAVFLVVA
201 VSAVSNFKQN RQFEKLSKES 201 VSAVSNFKQN RQFEKLSKES
221 SDIKVEVVRD GRRQFISVFE 221 SDIKVEVVRD GRRQFISVFE
241 VVVGDVVCLK IGDQIPADGL 241 VVVGDVVCLK IGDQIPADGL
261 FLDGHSLKVD ESS TGESDH 261 FLDGHSLKVD ESS TGESDH
281 VEINGSNNPF VLSGTKVTNG 281 VEINGSNNPF VLSGTKVTNG
301 FGS LVTSVG NTAWGE S 301 FGS LVTSVG NTAWGE S
321 SINRELDEET PLQARLNKLT 321 SINRELDEET PLQARLNKLT
341 SAIGKIGLAV AVLVLAVLLI 341 SAIGKIGLAV AVLVLAVLLI
361 RYFTGNTKDD QGNKEYIRGK 361 RYFTGNTKDD QGNKEYIRGK
381 TKFDS NSV VEIISAAITI 381 TKFDS NSV VEIISAAITI
401 VVVAIPEGLP LAVTLTLAYS 421 MKQMMADHAM VRKLSACETM 401 VVVAIPEGLP LAVTLTLAYS 421 MKQMMADHAM VRKLSACETM
441 GSATTICTDK TGTLTLNEMK 441 GSATTICTDK TGTLTLNEMK
461 V EFWLGKEL GSISSEIAP 461 V EFWLGKEL GSISSEIAP
481 NVHKLLQQAV ALNTTGTVYK 481 NVHKLLQQAV ALNTTGTVYK
501 PNSRSLPEIS GSPTEKAILS 501 PNSRSLPEIS GSPTEKAILS
521 WAVSDLG NL DDPKQNYELI 521 WAVSDLG NL DDPKQNYELI
541 QVEAFNSEKK RSGVLIRRKS 541 QVEAFNSEKK RSGVLIRRKS
561 ESGGATQVHW KGAAE ILA 561 ESGGATQVHW KGAAE ILA
581 CSQYYDRSGV VKAIDEEERV 581 CSQYYDRSGV VKAIDEEERV
601 E GKVIED A AKSLRCIAFA 601 E GKVIED A AKSLRCIAFA
621 HTQNPKDNER VLQESGLILL 621 HTQNPKDNER VLQESGLILL
641 GLVGLKDPCR PGVRKAVEAC 641 GLVGLKDPCR PGVRKAVEAC
661 INAGVNIKII TGDNIFTAKA 661 INAGVNIKII TGDNIFTAKA
681 IATECGILQP NEDLREAVIE 681 IATECGILQP NEDLREAVIE
701 GVQFRNYSPE ER AKINKIC 701 GVQFRNYSPE ER AKINKIC
721 VMARSSPFDK LLMVQCLKQN 721 VMARSSPFDK LLMVQCLKQN
741 GHVVAVTGDG TNDAPALKEA 741 GHVVAVTGDG TNDAPALKEA
761 DIGLSMGIQG TEVAKESSDI 761 DIGLSMGIQG TEVAKESSDI
781 IILDDNFTSV VTVLRWGRCV 781 IILDDNFTSV VTVLRWGRCV
Q Q
801 FNNIQKFIQF QLTVNIAALV 801 FNNIQKFIQF QLTVNIAALV
821 INFIAAVSSG EIPLTAVQLL 821 INFIAAVSSG EIPLTAVQLL
841 WVNLIMDTFG ALALATERPT 841 WVNLIMDTFG ALALATERPT
861 NDLMTKPPVG RSKPLISNI 861 NDLMTKPPVG RSKPLISNI
881 WRNLIAQALY QVAVLLTLQF 881 WRNLIAQALY QVAVLLTLQF
901 RGKFIFDVDK KVNNTLIFNT > 901 RGKFIFDVDK KVNNTLIFNT >
921 FVLCQVFNEF NARKLEKKNI 921 FVLCQVFNEF NARKLEKKNI
941 FQGLHKNKLF LGIIAITIIL 941 FQGLHKNKLF LGIIAITIIL
961 QVVMVEFLKR FANTQRLNWG 961 QVVMVEFLKR FANTQRLNWG
981 QWGTCIGIAA LSWPLGWLVK 981 QWGTCIGIAA LSWPLGWLVK
1001 WIPA* 1001 WIPA*
GhATPase-2基因的核苷酸序列 SEQ ID NO: 2 Nucleotide sequence of GhATPase-2 gene SEQ ID NO: 2
1 ATGTCGTTAA GACACCGCA , CACAGGTTAC CTAGAACCAG CCATGTCTGA TGGAGAAGAT 1 ATGTCGTTAA GACACCGCA , CACAGGTTAC CTAGAACCAG CCATGTCTGA TGGAGAAGAT
61 ACTCCAATAG TGAAATGCCA GCACCGAAGG TGGCGTTCGG TTTTTGCAGC CATATATTCT61 ACTCCAATAG TGAAATGCCA GCACCGAAGG TGGCGTTCGG TTTTTGCAGC CATATATTCT
121 GCCAGGATTT GTAC^AGA^A ATTATCAACA AGA^ACAGAT '. j H '121 GCCAGGATTT GTAC^AGA^A ATTATCAACA AGA^ACAGAT '. j H '
181 CTTTCCTACA TTGCCCTTGA TGTCCATGAC AGTGACTCGA GTGATGATCG CTTACCTTCT181 CTTTCCTACA TTGCCCTTGA TGTCCATGAC AGTGACTCGA GTGATGATCG CTTACCTTCT
241 CTCGGTGTTG ATCAGAA^AC ACTCACTGAG GTGGTAAGGG AGAAGAGCCT TGAAACCCTA241 CTCGGTGTTG ATCAGAA^AC ACTCACTGAG GTGGTAAGGG AGAAGAGCCT TGAAACCCTA
301 AGTAAACTTG GAGGCGTGAA GCAAGTCTTG AAACTGATAA GA AGATGGT301 AGTAAACTTG GAGGCGTGAA GCAAGTCTTG AAACTGATAA GA AGATGGT
361 ATCAGTGCTA ATGAAGCTGA TCTTGCACAT CGGGTCAATG TATTCGGTGC 361 ATCAGTGCTA ATGAAGCTGA TCTTGCACAT CGGGTCAATG TATTCGGTGC
421 CAGAAACCAC TTTGTTTATG AGATACCACC 481 ATTATCATAC TCTTGGTTTG TGCTGTTCTC TCTCTGGGCT TTGGCATCAA ACAGCATGGC421 CAGAAACCAC TTTGTTTATG AGATACCACC 481 ATTATCATAC TCTTGGTTTG TGCTGTTCTC TCTCTGGGCT TTGGCATCAA ACAGCATGGC
541 ATA¾CGGATG GAGGGTACGA TGGTGGGAGT ATTGTCATTG CTGTCTTTCT AGTTGTTGCT541 ATA3⁄4CGGATG GAGGGTACGA TGGTGGGAGT ATTGTCATTG CTGTCTTTCT AGTTGTTGCT
601 GTATCTGCTG TCAGTAACTT TA¾GCAAAAC AGACAATTCG AGA^ACTTTC ^ ^GGAGAGT601 GTATCTGCTG TCAGTAACTT TA3⁄4GCAAAAC AGACAATTCG AGA^ACTTTC ^ ^GGAGAGT
661 AGTGATATAA AAGTGGAAGT AGTGAGAGAT 、 ^ A¾TTTATATC AGTCTTTGAA661 AGTGATATAA AAGTGGAAGT AGTGAGAGAT , ^ A3⁄4TTTATATC AGTCTTTGAA
721 GTTGTCGTGG GTGATGTCGT GTGCTTGAi A ATTGGTGATC AAATTCCAGC GGATGGATTG721 GTTGTCGTGG GTGATGTCGT GTGCTTGAi A ATTGGTGATC AAATTCCAGC GGATGGATTG
781 TTCTTGG EATG GACACTCTTT GAAGGTGGAT G^ATCTAGCA TGACCGGTGA AAGCGACCAT781 TTCTTGG EATG GACACTCTTT GAAGGTGGAT G^ATCTAGCA TGACCGGTGA AAGCGACCAT
84 1 GTTGAGATCA ATGGCAGCAA CAATCCTTTT GTTCTTTCTG G ACAAAGGT CACA^ATGGG 84 1 GTTGAGATCA ATGGCAGCAA CAATCCTTTT GTTCTTTCTG G ACAAAGGT CACA^ATGGG
9 9
901 TTCGGTTCAA T EHGCTTGTTAC ATGAATACGG CATGGGGGGA GATGATGAGT 901 TTCGGTTCAA T EHGCTTGTTAC ATGAATACGG CATGGGGGGA GATGATGAGT
961 TCCATAAACC GTGAGTTAGA TGAAGAAACT CCATTACAGG CTCGCCTCAA CAAGCTGACT 961 TCCATAAACC GTGAGTTAGA TGAAGAAACT CCATTACAGG CTCGCCTCAA CAAGCTGACT
TCTG ¾ATTG GGAAGATTGG ATTGGCAGTG GCTGTACTAG TCTG 3⁄4ATTG GGAAGATTGG ATTGGCAGTG GCTGTACTAG
1 081 CGTTACTTCA CTGGAAACAC AAAAGATGAC AAGAATATAT TCGAGGCAAG 1 081 CGTTACTTCA CTGGAAACAC AAAAGATGAC AAGAATATAT TCGAGGCAAG
1141 ACAGCATGAT H GAACTCAGTC GTGGAGATAA TTTCAGCAGC AATTACCATC 1141 ACAGCATGAT H GAACTCAGTC GTGGAGATAA TTTCAGCAGC AATTACCATC
GTGGTdTTG CA TTCCAGA AGGTCT Cn^ TTGGCAGTGA CCCTAACTTT GTGGTdTTG CA TTCCAGA AGGTCT Cn^ TTGGCAGTGA CCCTAACTTT
E E
1261 ATGAAGCA^ TGATGGCTGA TCATGCAATG GTCAGAAAAC TTTCAGCTTG 1261 ATGAAGCA^ TGATGGCTGA TCATGCAATG GTCAGAAAAC TTTCAGCTTG
1321 CA CAATCTG CACAGATA G L ACAGGTACCC TTACTTTAAA TGAAATGAAG 1321 CA CAATCTG CACAGATA G L ACAGGTACCC TTACTTTAAA TGAAATGAAG
] '-- ] '--
1381 GTTATGGAGT GAAAGAATTA ATGGGCAGTA AA AGCACCT 44 _ L 1381 GTTATGGAGT GAAAGAATTA ATGGGCAGTA AA AGCACCT 44 _ L
AATGTCCATA AGTTACTGCA GCTCTCAACA (HU GTAC T '1 ATAAG AATGTCCATA AGTTACTGCA GCTCTCAACA (HU GTAC T '1 ATAAG
1501 GATCAGTTCC TGAAATTTCT GGTAGTC cCAA CTGAGAAAGC 1501 GATCAGTTCC TGAAATTTCT GGTAGTC cCAA CTGAGAAAGC
1561 CAGATTTGGG GATGAAGCTA GATGACCCAA AGCAAAACTA 1561 CAGATTTGGG GATGAAGCTA GATGACCCAA AGCAAAACTA
1621 CAAGTAGAGG CCTTCAATTC AGAGAAGAAG AGGAGTGGAG TTCTGATAAG GAGGAAGAGT 1621 CAAGTAGAGG CCTTCAATTC AGAGAAGAAG AGGAGTGGAG TTCTGATAAG GAGGAAGAGT
1681 GAGAGTGGCG GGTGCAGTGG AAGGGTGCTG CTTGGCCATG1681 GAGAGTGGCG GGTGCAGTGG AAGGGTGCTG CTTGGCCATG
1741 TGCTCACAAT Al'l'ATGATAG AAGTGGTGTA EH AGAAAGAGTA1741 TGCTCACAAT Al'l'ATGATAG AAGTGGTGTA EH AGAAAGAGTA
18 01 GAGATGGGGA AAGTTATTGA GGATATGGCA GCCAA AGCT 18 01 GAGATGGGGA AAGTTATTGA GGATATGGCA GCCAA AGCT
1861 CACACACAAA ATCCAAAAGA CAATGAACGA GTTTTGCAAG AAAGTGGACT O O CA CTTGCTA 1861 CACACACAAA ATCCAAAAGA CAATGAACGA GTTTTGCAAG AAAGTGGACT O O CA CTTGCTA
O O
1921 GGGCTGGTAG GTTTGAAAGA CCCATGTCGT GAAAAGCAG AGAAGCT GC 1921 GGGCTGGTAG GTTTGAAAGA CCCATGTCGT GAAAAGCAG AGAAGCT GC
H H
1981 ATAAATGCTG GAGTAAACAT CAAGATTATA ACTGGAGACA ATATC TCAC AGCAAA LGGCT 1981 ATAAATGCTG GAGTAAACAT CAAGATTATA ACTGGAGACA ATATC TCAC AGCAAA LGGCT
E E E E
2 041 ATAGCAACTG AATGTGGCA TTTGCAACCC AATGAGGATT TGAGGGAAGC TGTAATAGAA 2 041 ATAGCAACTG AATGTGGCA TTTGCAACCC AATGAGGATT TGAGGGAAGC TGTAATAGAA
2101 GGTGTACAGT TCCGAAATTA CTCACCAGAA GAAAG-AATGG CTAAGATCAA CAAAATTTGT2101 GGTGTACAGT TCCGAAATTA CTCACCAGAA GAAAG-AATGG CTAAGATCAA CAAAATTTGT
2161 GTAATGGCCA GATCCTCACC TTTTGACAAA CTTCTGATGG TACAGTGTC AAAGCAGAAT2161 GTAATGGCCA GATCCTCACC TTTTGACAAA CTTCTGATGG TACAGTGTC AAAGCAGAAT
2221 GGTCATG TG TAGCAGTCAC TGGGGACGGC ACCAATGA G CACCAGCTTT AAAGGAAGCA2221 GGTCATG TG TAGCAGTCAC TGGGGACGGC ACCAATGA G CACCAGCTTT AAAGGAAGCA
2281 GATATTGGAC TTCGATGGG AATCCAAGGA ACAGAAGTTG CCAAGGA ^AG CTCAGACATA 2281 GATATTGGAC TTCGATGGG AATCCAAGGA ACAGAAGTTG CCAAGGA ^AG CTCAGACATA
ATCATTT GG ATGATAACTT TACTTCTGTG GTGACTGT T TAAGG GGGG TAGGTGTGTC ATCATTT GG ATGATAACTT TACTTCTGTG GTGACTGT T TAAGG GGGG TAGGTGTGTC
24 01 TTCAATA¾CA TTCAGA^ATT CATTCAGTTT CAGCTTACAG TGAATATAGC AGCACTAGTC 24 01 TTCAATA3⁄4CA TTCAGA^ATT CATTCAGTTT CAGCTTACAG TGAATATAGC AGCACTAGTC
2461 ATCAACTTCA TTGCTGCAGT ATCTTCTGGT G^A¾TCCCAT TGACAGCAGT CCAACTATTG 2461 ATCAACTTCA TTGCTGCAGT ATCTTCTGGT G^A3⁄4TCCCAT TGACAGCAGT CCAACTATTG
TGGGTGA¾CT TAATA¾TGGA GCTTTAGCTT TGGCCACTGA GCGACCTACC TGGGTGA3⁄4CT TAATA3⁄4TGGA GCTTTAGCTT TGGCCACTGA GCGACCTACC
2581 AATGATCTCA TGACAAAGCC ACCTGTGGGT CGATCCAAGC CCCTCATATC CAACATCATG2581 AATGATCTCA TGACAAAGCC ACCTGTGGGT CGATCCAAGC CCCTCATATC CAACATCATG
2641 TGGAGGA¾CC TCATTGCTCA AGCCTTGTAT CAGGTTGCAG TTCTGCTAAC CCTTCAGTTC2641 TGGAGGA3⁄4CC TCATTGCTCA AGCCTTGTAT CAGGTTGCAG TTCTGCTAAC CCTTCAGTTC
2701 AGGGGAAAAT TTATCTTTGA TGTGGATA^A AAGGTCAATA ACACACTTAT TTTCAACACT2701 AGGGGAAAAT TTATCTTTGA TGTGGATA^A AAGGTCAATA ACACACTTAT TTTCAACACT
2761 TTTGTCCTCT GCC^AGTGTT TA¾TGAGTTC ΑΆ.Τ G C C AG AA AACTTGA^AA GA¾GAATATA2761 TTTGTCCTCT GCC^AGTGTT TA3⁄4TGAGTTC ΑΆ.Τ G C C AG AA AACTTGA^AA GA3⁄4GAATATA
2821 TTCCAGGGAC TACACAAGA , CAAACTCTTT CTAGGGATCA TTGCCAT^AC CATAATTCTT2821 TTCCAGGGAC TACACAAGA , CAAACTCTTT CTAGGGATCA TTGCCAT^AC CATAATTCTT
2881 CAAGTGGTAA TGGTGGAATT CTTGAAGAGG TTTGCT^ACA GA¾CTGGGGG2881 CAAGTGGTAA TGGTGGAATT CTTGAAGAGG TTTGCT^ACA GA3⁄4CTGGGGG
¾ATGGGGTA TTGTCCTGGC CACTTGGCTG TGGATTCCAG 实施例 3 GhATPase-2基因的植物表达载体的构建 3⁄4ATGGGGTA TTGTCCTGGC CACTTGGCTG TGGATTCCAG Example 3 Construction of a plant expression vector for the GhATPase-2 gene
选择植物双元表达载体 pCAMBIA2300 (购自北京鼎国昌盛生物技术有限责任公 司) 作为植物表达载体, 用 Pnos启动子替换 ΝΡΤΠ基因含双增强子的 35S启动子, 以降低 ΝΡΤΠ 蛋白在植物中的表达。 选择 35S 启动子及 Tnos 终止子分别作为 G/L4 Pa -2基因的启动子和终止子, 构建流程图如图 1所示。 The plant binary expression vector pCAMBIA2300 (purchased from Beijing Dingguo Changsheng Biotechnology Co., Ltd.) was selected as a plant expression vector, and the 35S promoter containing the double enhancer of the ΝΡΤΠ gene was replaced with the Pnos promoter to reduce the expression of prion protein in plants. . The 35S promoter and Tnos terminator were selected as promoters and terminators of the G/L4 Pa-2 gene, respectively. The construction flow chart is shown in Figure 1.
使用引物 SEQ ID NO: 12和 SEQ ID NO: 13, 以植物表达载体 pBI121质粒(购 自北京华夏远洋科技有限公司) 为模板扩增 Pnos, 采用 TaKaRa 的 PrimeSTAR HS DNA聚合酶。 50 l PCR反应体系: 10 l 5 X PS Buffer、 3 μ 1 2.5 mM的 dNTP、 1.0 μ 1 ρΒΙ121质粒、 1.0 μ ΐ PrimeSTAR HS DNA聚合酶、 10 μ M的引物 SEQ ID NO: 12和 SEQ ID NO: 13各 2.0 μ ΐ以及 31 μ 1的双蒸水。 PCR反应条件: 94°C预变性 5 分钟, 33个循环 (94°C变性 30秒, 56°C退火 30秒, 72°C延伸 30秒) , 72 °C延伸 10 分钟。 通过 EcoRI、 Bglll酶切将所得的 PCR产物按试剂盒说明 (Promega, T4 连接 酶试剂盒) 连接到 pCAMBIA2300获得 pCAMBIA2300-l。 Using primers SEQ ID NO: 12 and SEQ ID NO: 13, Pnos was amplified using the plant expression vector pBI121 plasmid (purchased from Beijing Huaxia Ocean Technology Co., Ltd.) using TaKaRa's PrimeSTAR HS DNA polymerase. 50 l PCR reaction system: 10 l 5 X PS Buffer, 3 μ 1 2.5 mM dNTP, 1.0 μ 1 ρΒΙ121 plasmid, 1.0 μ ΐ PrimeSTAR HS DNA polymerase, 10 μM primers SEQ ID NO: 12 and SEQ ID NO : 13 each of 2.0 μ ΐ and 31 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 56 ° C for 30 seconds, extension at 72 ° C for 30 seconds), extension at 72 ° C for 10 minutes. The resulting PCR product was digested with EcoRI, Bglll, and ligated into pCAMBIA2300 according to the kit instructions (Promega, T4 ligase kit) to obtain pCAMBIA2300-1.
SEQ ID NO: 12 SEQ ID NO: 12
GCACGAATTC ggcgggaaac gacaatctga GCACGAATTC ggcgggaaac gacaatctga
SEQ ID NO: 13 SEQ ID NO: 13
ATCCAGATCTAGATCCGGTGCAGATTATTTG ATCCAGATCTAGATCCGGTGCAGATTATTTG
用引物 SEQ ID NO: 14和 SEQ ID NO: 15以 pBI121质粒为模板扩增 Tnos, 采 用 TaKaRa 的 PrimeSTAR HS DNA聚合酶。 50 μ 1 PCR 反应体系: 10 μ ΐ 5 X PS Buffer 3 μ 1 2.5 mM的 dNTP、 1.0 μ 1 pBI121质粒、 1.0 μ 1 Prime STAR、 10 μ Μ的 引物 SEQ ID NO: 14和 SEQ ID NO: 15各 2.0 μ 1以及 31 μ 1的双蒸水。 PCR反应条 件: 94°C预变性 5分钟, 33个循环 (94°C变性 30秒, 58 °C退火 30秒, 72 °C延伸 30 秒), 72°C延伸 10分钟。 通过 Kpnl、 EcoRI酶切将所得的 PCR产物连接(Promega T4 连接酶试剂盒) 到 pCAMBIA2300-l获得 pCAMBIA2300-2。 Tnos was amplified using the primers SEQ ID NO: 14 and SEQ ID NO: 15 using the pBI121 plasmid as a template, and TaKaRa's PrimeSTAR HS DNA polymerase was used. 50 μ 1 PCR reaction system: 10 μ ΐ 5 X PS Buffer 3 μ 1 2.5 mM dNTP, 1.0 μ 1 pBI121 plasmid, 1.0 μ 1 Prime STAR, 10 μ Μ primers SEQ ID NO: 14 and SEQ ID NO: 15 2.0 μl and 31 μl of double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 30 seconds), extension at 72 ° C for 10 minutes. The resulting PCR product was ligated by Kpnl and EcoRI (Promega T4 ligase kit) to pCAMBIA2300-1 to obtain pCAMBIA2300-2.
SEQ ID NO: 14: SEQ ID NO: 14:
AAGGGTACCGAATTTCCCCGATCGTTCAAA SEQ ID NO: 15: AAGGGTACCGAATTTCCCCGATCGTTCAAA SEQ ID NO: 15:
TCAGAATTCCCAGTGAATTCCCGATCTAGTA 用引物 SEQIDNO: 16和 SEQIDNO: 17以 pCAMBIA2300质粒为模板扩增 35S 启动子。 采用 TaKaRa的 PrimeSTAR HS DNA聚合酶。 50 μ 1 PCR反应体系: 10 μ 1 5XPS Buffer、 3 μ 1 2.5 mM 的 dNTP、 1.0 μ 1 pCAMBIA2300 质粒、 1.0 μ 1 PrimeSTAR HS DNA聚合酶、 10 μ M的引物 SEQ ID NO: 16禾 P SEQ ID NO: 17各 2.0 μΐ以及 31 μΐ双蒸水。 PCR反应条件: 94°C预变性 5分钟, 33个循环 (94°C变 性 30秒, 58°C退火 30秒, 72°C延伸 30秒) , 72°C延伸 10分钟。 通过 HindIII、 Sail 酶切将所得的 PCR 产物连接 (连接方法同上) 到 pCAMBIA2300-2 获得 pCAMBIA2300-3。 TCAGAATTCCCAGTGAATTCCCGATCTAGTA The 35S promoter was amplified using the primers SEQ ID NO: 16 and SEQ ID NO: 17 using the pCAMBIA2300 plasmid as a template. PrimeSTAR HS DNA polymerase using TaKaRa. 50 μ 1 PCR reaction system: 10 μ 1 5XPS Buffer, 3 μ 1 2.5 mM dNTP, 1.0 μ 1 pCAMBIA 2300 plasmid, 1.0 μ 1 PrimeSTAR HS DNA polymerase, 10 μM primer SEQ ID NO: 16 and P SEQ ID NO: 17 each of 2.0 μΐ and 31 μΐ double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 30 seconds), extension at 72 ° C for 10 minutes. The resulting PCR product was ligated by HindIII, Sail digestion (ligation method as above) to pCAMBIA2300-2 to obtain pCAMBIA2300-3.
SEQIDNO: 16: SEQIDNO: 16:
ACTAAGCTTTAGAGCAGCTTGCCAACATGGTG ACTAAGCTTTAGAGCAGCTTGCCAACATGGTG
SEQIDNO: 17: SEQIDNO: 17:
TGAGTCGACAGAGATAGATTTGTAGAGAGAGACT 用引物 SEQ ID NO: 18和 SEQ ID NO: 19扩增 G/^ Pa^-2编码基因的全长序 列(模板是实施例 2所获得阳性 GhATPase-2-pGEM质粒), 采用 TaKaRa的 PrimeSTAR HS DNA 聚合酶。 50 μ 1 PCR 反应体系: 10 μΐ 5XPS Buffer 3 μ 1 2.5 mM 的 dNTP 1.0 μ 1 GhATPase-2-pGEM质粒、 1.0 μ 1 PrimeSTAR HS DNA聚合酶、 10 μ M 的引物 SEQIDNO: 18和 SEQIDNO: 19各 2.0 μ 1以及 31 μ 1双蒸水。 PCR反应条 件: 94°C预变性 5分钟, 33个循环 (94°C变性 30秒, 58°C退火 30秒, 72°C延伸 3 分钟) , 72°C延伸 10分钟。 通过 Sall、 Smal酶切将所得的 PCR产物连接(连接方法 同上) 到 pCAMBIA2300-3, 经验证后获得植物表达载体 35S-GhATPase-2-2300 (图 2) 。 TGAGTCGACAGAGATAGATTTGTAGAGAGAGACT Amplifies the full-length sequence of the G/^ Pa^-2 encoding gene with primers SEQ ID NO: 18 and SEQ ID NO: 19 (template is the positive GhATPase-2-pGEM plasmid obtained in Example 2), using PrimeSTAR of TaKaRa HS DNA polymerase. 50 μ 1 PCR reaction system: 10 μΐ 5XPS Buffer 3 μ 1 2.5 mM dNTP 1.0 μ 1 GhATPase-2-pGEM plasmid, 1.0 μ 1 PrimeSTAR HS DNA polymerase, 10 μM primers SEQ ID NO: 18 and SEQ ID NO: 19 2.0 μ 1 and 31 μ 1 double distilled water. PCR reaction conditions: Pre-denaturation at 94 ° C for 5 minutes, 33 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 3 minutes), extension at 72 ° C for 10 minutes. The obtained PCR product was ligated by Sall and Smal (connection method as above) to pCAMBIA2300-3, and the plant expression vector 35S-GhATPase-2-2300 was obtained after verification (Fig. 2).
SEQIDNO: 18 SEQIDNO: 18
ACTGTCGACATGTCGTTAAGACACCGCAACA SEQIDNO: 19 ACTGTCGACATGTCGTTAAGACACCGCAACA SEQIDNO: 19
ACTCCCGGGTC ATGCTGGA ATCC ACTTAACTA ACTCCCGGGTC ATGCTGGA ATCC ACTTAACTA
实施例 4 35S-GhATPase-2-2300表达载体转化农杆菌 Example 4 Transformation of Agrobacterium by 35S-GhATPase-2-2300 Expression Vector
农杆菌 LBA4404 (购自 Biovector Science Lab, Inc) 感受态细胞的制备: 将农杆 菌 LBA4404在含 50 μ g/ml利福平和 50 μ g/ml链霉素的 LB固体培养基上划单斑接 种, 28°C培养 1至 2天。 挑取单菌落接种于 5 ml含 50 μ g/ml利福平和 50 μ g/ml链 霉素的 LB液体培养基中, 28°C下摇动培养过夜(约 12-16小时)至 OD6。。值为 0.4, 形成种子菌液。 取 5 ml培养活化后的菌液 (1 :20的比例) 接种于 100 ml含 50 μ g/ml 利福平和 50 μ g/ml 链霉素的 LB 液体培养基中, 28 °C摇动培养 2-2.5 小时至 OD6QQ=0.8。 冰浴菌液 10 分钟, 每隔 3 分钟摇匀一次, 使所述细菌均匀进入休眠状 态。 于 4°C下 4000 g离心 10分钟, 弃上清液; 加入 1 ml冰预冷的 10% (体积比) 甘 油重悬浮菌体, 4°C下 4000 g离心 10分钟, 收集沉淀; 用冰预冷的 10% (体积比) 甘油重复洗 3-4次; 然后加入适量冰预冷的 10% (体积比)甘油重新悬浮细菌沉淀, 即制得 LBA4404感受态细胞, 以 40 μ ΐ/管将其分装, 于 -70°C保存备用。 Agrobacterium tumefaciens LBA4404 (purchased from Biovector Science Lab, Inc) Preparation of Competent Cells: Agrobacterium LBA4404 was spotted on LB solid medium containing 50 μg/ml rifampicin and 50 μg/ml streptomycin Incubate at 28 ° C for 1 to 2 days. Single colonies were picked and inoculated into 5 ml of LB liquid medium containing 50 μg/ml rifampicin and 50 μg/ml streptomycin, and cultured overnight (about 12-16 hours) to OD 6 by shaking at 28 °C. . A value of 0.4 forms a seed broth. 5 ml of culture-activated bacterial solution (1:20 ratio) was inoculated into 100 ml of LB liquid medium containing 50 μg/ml rifampicin and 50 μg/ml streptomycin, and cultured at 28 °C. -2.5 hours to OD 6QQ = 0.8. The ice bath solution was shaken for 10 minutes every 3 minutes to allow the bacteria to enter a dormant state uniformly. Centrifuge at 4000 g for 10 minutes at 4 ° C, discard the supernatant; resuspend the cells by adding 1 ml of ice pre-cooled 10% (by volume) glycerol, centrifuge at 4000 g for 10 minutes at 4 ° C, collect the precipitate; 10% (by volume) of the pre-cooled glycerin was washed 3-4 times; then the bacterial pellet was resuspended by adding an appropriate amount of ice-cold 10% (by volume) glycerol to prepare LBA4404 competent cells to 40 μM/tube. Dispense and store at -70 ° C for later use.
转化农杆菌: 在冰上融化所述的 LBA4404感受态细胞, 向 40 μ 1的所述感受态 细胞中加入 1 μ 1实施例 3获得的质粒 35S-GhATPase-2-2300, 混匀后冰浴约 10分钟。 将冰浴后的感受态细胞和 35S-GhATPase-2-2300质粒的混合物用微量移液器转移到冰 预冷的 0.1cm规格的电击杯 (购自 Bio-Rad) 中, 轻敲使悬浮液到达电击杯底部, 注 意不要有气泡。 将所述电击杯放到电击室的滑道上, 推动滑道将电击杯放至电击室 基座电极处。 将 MicroPulser (购自 Bio-Rad) 的程序设置为 "Agr" , 电击一次 。 立 即取出电击杯, 加入 28°C预热的 200 μ1 ίΒ培养基。 快速而轻柔的用微量移液器将感 受态细胞打匀。 将悬浮液转入 1.5 ml的离心管, 在 28°C下 225 rpm摇动培养 1小时。 取 100-200 μ ΐ的菌液涂布于相应的抗性筛选培养基平板上 (LB固体培养基, 含 50 μ g/ml利福平、 50 μ g/ml链霉素、 50 μ g/ml卡那霉素) , 28°C培养。 筛选阳性转化 克隆, 并将其菌液于 -70°C保存备用。 实施例 5 受体材料拟南芥培养 Transformation of Agrobacterium: The LBA4404 competent cells were thawed on ice, and 1 μl of the plasmid 35S-GhATPase-2-2300 obtained in Example 3 was added to 40 μl of the competent cells, and the mixture was mixed and ice bathed. About 10 minutes. The mixture of the competent cells after the ice bath and the 35S-GhATPase-2-2300 plasmid was transferred to an ice-cold 0.1 cm size electric shock cup (purchased from Bio-Rad) using a micropipette, and tapped to make the suspension Arrive at the bottom of the electric shock cup, taking care not to have air bubbles. Place the electric shock cup on the slide of the electric shock chamber, and push the slide to place the electric shock cup on the base electrode of the electric shock chamber. Set the program of MicroPulser (purchased from Bio-Rad) to "Agr" and shock once. Immediately remove the electric shock cup and add 200 μl of 预 medium pre-warmed at 28 °C. Quickly and gently mix the sensitive cells with a micropipette. The suspension was transferred to a 1.5 ml centrifuge tube and incubated at 28 ° C for 1 hour at 225 rpm. 100-200 μM of bacterial solution was applied to the corresponding resistant selection medium plate (LB solid medium containing 50 μg/ml rifampicin, 50 μg/ml streptomycin, 50 μg/ Ml Kanamycin), cultured at 28 °C. Positive transformed clones were screened and their bacterial stocks were stored at -70 °C until use. Example 5 Receptor Material Arabidopsis Culture
选择吸水性好, 土质松软的蛭石配合营养土 (1 : 1 ) 作为拟南芥种植土壤。 直径 9 cm的花盆, 每盆播种 20-30颗种子 (哥伦比亚型, 来自美国俄亥俄州立 大学的拟南芥生物资源中心) 。 播种以后在花盆上罩上薄膜, 给植株的生长提 供一个湿润的环境。 恒温 22°C, 光照强度 3500-4000 lx, 光照周期为 12小时黑 暗、 12小时光照培养, 每 7天浇灌一次 1/2MS , 培养 30天后, 每盆保留 4-5棵 植株, 光照周期调整为 8小时黑暗、 16小时光照培养, 待大部分植株都抽薹之 后, 在花序基部剪掉整个主苔, 去其顶端优势, 约 1周后在腋芽部位长出 4-6 个新生侧苔, 待侧苔花序形成花蕾并部分开花或形成 1-2个角果时, 便可用于 转化。 实施例 6 拟南芥花浸转化: Select the vermiculite with good water absorption and soft soil to match the nutrient soil (1:1) as the soil for Arabidopsis planting. Flower pots with a diameter of 9 cm, 20-30 seeds per pot (Columbia type, from the Arabidopsis Bioresource Center, Ohio State University). After sowing, the film is covered with a film to provide a moist environment for plant growth. Constant temperature 22 ° C, light intensity 3500-4000 lx, light cycle 12 hours dark, 12 hours light culture, 1/2MS watered every 7 days, after 30 days of culture, 4-5 plants per pot, the light cycle is adjusted to After 8 hours of darkness and 16 hours of light culture, after most of the plants were twitched, the entire main moss was cut off at the base of the inflorescence, and the top edge was taken. After about 1 week, it grew 4-6 in the axillary bud. A new genus of the genus, which can be used for transformation when the inflorescence forms a flower bud and partially blooms or forms 1-2 pods. Example 6 Arabidopsis flower leaching transformation:
将实施例 4获得的已转化表达载体 35S-GhATPase-2-2300的农杆菌菌液接 种至含有 10-50μ8/ηι1卡那霉素 (kan) 的 LB液体培养基中培养过夜, 第二天早 上按 1:50接种至含有 50μ8/ηι1卡那霉素的新的 LB培养基 (1L) 中, 培养约 8 个小时,至农杆菌液 OD600应当在 1.0到 1.2之间。室温 5000 rpm离心 5分钟, 弃上清,将农杆菌沉淀悬浮于浸染培养基( 1/2MS; 5%蔗糖;用 KOH调至 pH5.7; 0.02% Silwet L-77 ) 中, 使 OD600在 0.8左右。 将实施例 5制备的用于转化的 拟南芥的上部缓缓、 螺旋式浸入所述含农杆菌的浸染培养基内, 轻轻顺时针晃 荡, 约 2分钟, 用透明塑料罩盖严以保持湿度, 放入温室过夜。 24小时后移去 塑料透明罩, 用水浇透。 之后 2-3周, 保证植株水分充足。 当植株停止开花, 第一个果荚成熟变黄时, 用纸袋套住, 当纸袋内的所有果荚变黄后, 停止浇水, 1-2周干燥后收取种子, 进行转化子筛选, 同时取未经转化处理的拟南芥果荚作 为对照。 实施例 7 拟南芥转基因阳性转化子的筛选 The Agrobacterium liquid of the transformed expression vector 35S-GhATPase-2-2300 obtained in Example 4 was inoculated to an LB liquid medium containing 10-50 μ 8 /ηι 1 kanamycin (kan), and cultured overnight. Inoculated in the morning to 1:50 in a new LB medium (1 L) containing 50 μ 8 /ηι 1 kanamycin, and cultured for about 8 hours until the Agrobacterium liquid OD600 should be between 1.0 and 1.2. Centrifuge at 5000 rpm for 5 minutes at room temperature, discard the supernatant, and suspend the Agrobacterium pellet in the impregnation medium (1/2MS; 5% sucrose; adjust to pH 5.7 with KOH; 0.02% Silwet L-77) to make the OD600 at 0.8. about. The upper part of the Arabidopsis thaliana prepared for transformation prepared in Example 5 was slowly and spirally immersed in the Agrobacterium-containing dyeing medium, and gently swayed clockwise for about 2 minutes, and covered with a transparent plastic cover. Humidity, put in the greenhouse overnight. After 24 hours, remove the plastic transparent cover and pour through the water. After 2-3 weeks, ensure that the plants are hydrated. When the plant stops flowering and the first fruit pod matures and turns yellow, it is covered with a paper bag. When all the pods in the paper bag turn yellow, the watering is stopped. After 1-2 weeks of drying, the seeds are collected and the transformants are screened. Untransformed Arabidopsis fruit pods were taken as controls. Example 7 Screening of transgenic positive transformants from Arabidopsis thaliana
种子消毒: 先用 70%乙醇浸泡 10分钟, 并不时地使种子悬浮; 然后用无菌 水洗四次, 并不时地使种子悬浮。然后, 将处理后的种子均匀涂布在含 50 μ8/ηι1 卡那霉素的 1/2MS固体筛选培养基表面上春化 2天 (一块 150 mm直径的平皿 最多播种 1500粒种子), 4°C春化 2天, 然后在恒温 22°C、 光照强度 3500-4000 lx、 光照周期为 12小时黑暗 /12小时光照的条件下培养 7-10天。 。 转基因种子 在所述筛选培养基 (MS+kan) 平板上萌发 2周以后, 将能够萌发并正常生长的 植株转入土壤继续培养。 剪取所述能够在筛选培养基上正常生长的每株植物的 1-2个叶片, 提取其 DNA作为模板, 用 SEQ ID NO: 18和 SEQ ID NO: 19做 PCR检测 (反应体系及条件同上) , 去除 PCR检测呈阴性的植株, 收集 PCR 检测呈阳性的植株的种子, 分别标记为 T0il-T0i21。 实施例 8 过表达 GhATPase-2的转基因拟南芥 T1代植株的种植 选择吸水性好, 土质松软的蛭石配合营养土 (1:1) 作为拟南芥种植土壤。 将 T0il-T0i21的每种转化子及未转基因对照拟南芥种子各播种 2盆, 每盆播种 20-30颗种子。播种以后在花盆上罩上薄膜,给植株的生长提供一个湿润的环境。 恒温 22°C,光照强度 3500-4000 lx,光照周期为 12小时黑暗、 12小时光照培养, 每 7天浇灌一次 1/2MS。 培养 25天后, 每株转基因拟南芥剪取 1-2个叶片提取 DNA作为模板, 用 SEQIDNO: 18和 SEQIDNO: 19作为引物进行 PCR检测 (反应体系及条件同上) , 去除 PCR检测呈阴性的植株, 每盆保留 7-8棵 PCR 检测呈阳性的苗, 继续培养 10天后, 每盆保留大小较一致的 5-7棵转基因拟南 芥苗或对照拟南芥苗进行耐盐实验。 实施例 9 过表达 GhATPase-2的转基因拟南芥 T1代植株的耐盐实验 将实施例 8中转基因拟南芥、 对照拟南芥各保留一盆植株不作处理, 正常 浇灌 1/2MS, 同时各一盆植株浇灌含有 150mMNaCl的 1/2MS, 在恒温 22°C、 光照强度 3500-4000 lx、 12小时光培养 /12小时暗的条件下培养 10天后观察实 验结果: T1代转基因植株 (TO代转基因植株的种子长成的植株) 的耐盐性鉴 定表明, T1代转基因植株 Tli5、 Tlil3、 Τ1Ϊ16三个株系表现出明显的耐盐性(见 图 3, 以 Tli5例, Tlil3、 T1U6的结果与类似, 在此未示出) 。 实施例 10 在转录水平上验证 GhATPase-2基因的表达 Seed disinfection: first soak for 10 minutes with 70% ethanol, occasionally suspend the seeds; then wash with sterile water four times, and occasionally suspend the seeds. Then, the treated seeds were uniformly coated on the surface of 1/2MS solid screening medium containing 50 μ 8 /ηι 1 kanamycin for 2 days (a 150 mm diameter plate was sown for up to 1500 seeds), 4 The solution was vernalized for 2 days, and then cultured for 7-10 days under the conditions of a constant temperature of 22 ° C, an illumination intensity of 3500-4000 lx, and a photoperiod of 12 hours of darkness/12 hours of light. . After germination of the transgenic seeds on the screening medium (MS+kan) plate for 2 weeks, the plants capable of germination and normal growth were transferred to the soil for further cultivation. 1-2 leaves of each plant capable of normal growth on the screening medium were extracted, and the DNA was extracted as a template, and PCR detection was carried out using SEQ ID NO: 18 and SEQ ID NO: 19 (reaction system and conditions are the same as above) The plants that were negative by PCR were removed, and the seeds of the plants positive for PCR were collected and labeled as T0il-T0i21. Example 8 Transgenic Arabidopsis thaliana T1 plants overexpressing GhATPase-2 were selected for water uptake, and the soily soft vermiculite was combined with nutrient soil (1:1) as the Arabidopsis planting soil. Each transformant of T0il-T0i21 and the non-transgenic control Arabidopsis seeds were each sown in 2 pots, and 20-30 seeds were seeded per pot. After sowing, the film is covered with a film to provide a moist environment for plant growth. The temperature was 22 ° C, the light intensity was 3500-4000 lx, the photoperiod was 12 hours dark, 12 hours light culture, and 1/2 MS was watered every 7 days. After 25 days of culture, 1-2 leaf extracts were extracted from each transgenic Arabidopsis thaliana as a template, and PCR was detected using SEQ ID NO: 18 and SEQ ID NO: 19 as primers (reaction system and conditions are the same as above), and plants negative for PCR detection were removed. 7-8 PCR-positive seedlings were retained in each pot. After 10 days of continuous culture, 5-7 transgenic Arabidopsis seedlings or control Arabidopsis thaliana seedlings with uniform size were kept in each pot for salt tolerance experiments. Example 9 Salt tolerance test of transgenic Arabidopsis thaliana T1 plants overexpressing GhATPase-2 The transgenic Arabidopsis thaliana and the control Arabidopsis thaliana each retained a potted plant in Example 8 and were normally treated with 1/2 MS, respectively. One pot of plants was 1/2MS in 150 mM NaCl, and the results were observed after incubation at a constant temperature of 22 ° C, light intensity of 3500-4000 lx, and 12 hours of light culture/12 hours of darkness: T1 generation transgenic plants (TO transgenic plants) The salt tolerance of the plants grown from the seeds of the plants showed that the T1 transgenic plants Tli5, Tlil3, and Τ1Ϊ16 showed significant salt tolerance (see Figure 3, Tli5, Tlil3, T1U6 results and Similar, not shown here). Example 10 Validation of GhATPase-2 Gene Expression at Transcriptional Level
将实施例 9中耐盐性好的 T1代转基因植株中随机选取 8棵(分别属于上述 Tli5、 Tlil3、 Tlil6三个耐盐株系), 实施例 9中对照植株随机选取 4棵, 各剪取盐(150 mM NaCl)处理 14天的叶片 0.05 g, 用植物 RNA提取试剂盒(Invitrogen)提取总 RNA。 紫外分光光度测定所得总 RNA在 260 nm和 280 nm的吸光度值, 计算各个 RNA浓 度。 依照 Invitrogen反转录试齐 Ll盒 Superscript III Reverse Transcriptase所示方法进行反 转录(1 总 RNA作为模板, 反转录引物 SEQIDNO: 11)。 使用引物 SEQIDNO: 10和 SEQ ID NO: 20 ( SEQ ID NO: 20: CTGAATTGAA GGCCTCTACT TG) 扩增 GhATPase-2片段, 检测其转录情况。 采用 TaKaRa的 PrimeSTAR HS DNA聚合 酶, 以上述反转录得到的 cDNA为模板进行 PCR反应。 50 lPCR反应体系: 10 μ 1 5XPS Buffer, 3 μ 12.5 mM的 dNTP, 2.0 μ 1 cDNA, 1.0 μ 1 PrimeSTAR HS DNA聚 合酶、 10 μΜ的引物 SEQIDNO: 10和 SEQIDNO: 20各 2.0 μ1, 以及 30 μ 1的双 蒸水。 PCR反应条件: 94°C预变性 5分钟, 32个循环(94°C变性 30秒, 58°C退火 30 秒, 72°C延伸 2分钟) , 72°C延伸 10分钟。 产物电泳结果如图 4所示: M为 DNA Ladder Marker (DL2000, 购自深圳瑞真生物技术有限公司) , 1-8为耐盐 T1代转基 因拟南芥植株, 10-13 为非转基因对照拟南芥植株, 9 为质粒 PCR 阳性对照 (35S-GhATPase-2-2300质粒)。 图中所示条带大小与阳性对照的大小一致(约为 1600 bp)。 结果表明, 耐盐 T1代转基因拟南芥植株中 G/^ ¼^-2有显著转录, 非转基因 对照拟南芥植株中没有 GhATP -2的转录。 Eight T1 transgenic plants with good salt tolerance in Example 9 were randomly selected (one of the above-mentioned Tli5, Tlil3, and Tlil6 three salt-tolerant strains), and the control plants in Example 9 were randomly selected from 4 plants. The leaves (0.05 mM) were treated with salt (150 mM NaCl) for 14 days, and total RNA was extracted using a plant RNA extraction kit (Invitrogen). The absorbance values of total RNA obtained at 260 nm and 280 nm were determined by ultraviolet spectrophotometry, and the respective RNA concentrations were calculated. Reverse transcription was carried out according to the method shown by Invitrogen reverse transcription assay L1 box Superscript III Reverse Transcriptase (1 total RNA as a template, reverse transcription primer SEQ ID NO: 11). The GhATPase-2 fragment was amplified using primers SEQ ID NO: 10 and SEQ ID NO: 20 (SEQ ID NO: 20: CTGAATTGAA GGCCTCTACT TG), and its transcription was examined. PrimeSTAR HS DNA polymerization using TaKaRa The enzyme was subjected to a PCR reaction using the cDNA obtained by the above reverse transcription as a template. 50 lPCR reaction system: 10 μ 1 5XPS Buffer, 3 μ 12.5 mM dNTP, 2.0 μ 1 cDNA, 1.0 μ 1 PrimeSTAR HS DNA polymerase, 10 μΜ primers SEQ ID NO: 10 and SEQ ID NO: 20 each 2.0 μ1, and 30 μ 1 double distilled water. PCR reaction conditions: pre-denaturation at 94 ° C for 5 minutes, 32 cycles (denaturation at 94 ° C for 30 seconds, annealing at 58 ° C for 30 seconds, extension at 72 ° C for 2 minutes), extension at 72 ° C for 10 minutes. The electrophoresis results of the product are shown in Figure 4: M is DNA Ladder Marker (DL2000, purchased from Shenzhen Ruizhen Biotechnology Co., Ltd.), 1-8 is a salt-tolerant T1 transgenic Arabidopsis plant, and 10-13 is a non-transgenic control Arabidopsis plants, 9 is a plasmid PCR positive control (35S-GhATPase-2-2300 plasmid). The size of the band shown is identical to the size of the positive control (approximately 1600 bp). The results showed that there was significant transcription of G/^1⁄4^-2 in the salt-tolerant T1 transgenic Arabidopsis plants, and no GhATP-2 transcription in the non-transgenic control Arabidopsis plants.
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| CN119685356B (en) * | 2025-02-27 | 2025-09-19 | 中国农业科学院作物科学研究所 | FtACA13 gene derived from tartary buckwheat, its expression vector and application |
Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN102770542A (en) * | 2007-05-22 | 2012-11-07 | 巴斯夫植物科学有限公司 | Plants with increased tolerance and/or resistance to environmental stress and increased biomass production |
| CN102952816A (en) * | 2011-08-23 | 2013-03-06 | 中国科学院遗传与发育生物学研究所 | Application of ATPase proteins in stress tolerance of plants |
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2013
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- 2013-06-24 WO PCT/CN2013/000749 patent/WO2014205596A1/en not_active Ceased
Patent Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN102770542A (en) * | 2007-05-22 | 2012-11-07 | 巴斯夫植物科学有限公司 | Plants with increased tolerance and/or resistance to environmental stress and increased biomass production |
| CN102952816A (en) * | 2011-08-23 | 2013-03-06 | 中国科学院遗传与发育生物学研究所 | Application of ATPase proteins in stress tolerance of plants |
Non-Patent Citations (4)
| Title |
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| DATABASE GENBANK 10 January 2009 (2009-01-10), accession no. AW 81554.1 * |
| DATABASE GENBANK 28 August 2009 (2009-08-28), accession no. C 237587.1 * |
| DATABASE GENBANK 31 May 2013 (2013-05-31), accession no. OY 11090.1 * |
| DATABASE GENBANK 4 December 2009 (2009-12-04), accession no. M_002328308.1 * |
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| Publication number | Publication date |
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| CN105189741B (en) | 2018-03-16 |
| CN105189741A (en) | 2015-12-23 |
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