WO2009139881A2 - Compositions and methods for growing embryonic stem cells - Google Patents
Compositions and methods for growing embryonic stem cells Download PDFInfo
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- WO2009139881A2 WO2009139881A2 PCT/US2009/002983 US2009002983W WO2009139881A2 WO 2009139881 A2 WO2009139881 A2 WO 2009139881A2 US 2009002983 W US2009002983 W US 2009002983W WO 2009139881 A2 WO2009139881 A2 WO 2009139881A2
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- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N5/00—Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
- C12N5/06—Animal cells or tissues; Human cells or tissues
- C12N5/0602—Vertebrate cells
- C12N5/0603—Embryonic cells ; Embryoid bodies
- C12N5/0606—Pluripotent embryonic cells, e.g. embryonic stem cells [ES]
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- C12N2502/00—Coculture with; Conditioned medium produced by
- C12N2502/11—Coculture with; Conditioned medium produced by blood or immune system cells
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2533/00—Supports or coatings for cell culture, characterised by material
- C12N2533/50—Proteins
- C12N2533/54—Collagen; Gelatin
Definitions
- HES cells Human embryonic Stem cells are pluripotent cells that have the ability to differentiate into almost all adult cell types therefore hold great promise for regenerative medicine.
- HES cells to maintain the HES cells in an undifferentiated state requires the use of mouse embryonic fibroblast feeder layer (Thompson JA et al., 1998). Because the use of mouse feeder cells is associated with contamination risks such as pathogen transmission and viral infection (Richards M et al., 2002), HES cells derived and cultured on mouse feeder cells are not suitable for clinical application. Much effort has been put into the development and refinement of xeno-free culture system.
- feeder system derived from human origin including human fetal skin fibroblasts, adult fibroblasts (Richards et al, 2002), foreskin fibroblasts (Amit et al, 2003) and human embryonic fibroblasts from differentiated HES (Stojkovic P et al., 2005).
- Richards et al have compared 11 various human feeder cells for the culture of human embryonic stem cells and found that feeder cells derived from human fetal tissues (3 independent cultures) are superior to cells from human adult tissues (7 independent cultures) (Richards et al., 2003). Because the fetal tissues were derived from human abortuses, fetal derived feeder cells will not be easily accepted.
- ES cells are derived from the inner cell mass of preimplantation embryos [15-17]. ES cells are pluripotent and are capable of differentiating into cells derived from all three embryonic germ layers. The traditional method used to derive mouse and human embryonic stem (ES) cells involves the use of support cells termed feeder cells or layers. These support cells provide a poorly understood set of signals that promote the conversion from blastocyst inner cell mass (ICM) cells to proliferating ES cells. Most commonly, primary cultures of mouse embryo fibroblasts are used as support cells for both mouse and human ES cultures.
- ICM blastocyst inner cell mass
- ES cell cultures are most commonly maintained on feeder layers until differentiation is desired. Since the signals supplied by support cells are not understood, it has been difficult to find substitute cell types or to remove cells altogether. For research purposes, support cells provide a source of experimental variability and cellular contamination to ES cultures but are not disabling in their impact. [0003]
- feeder cells whether human or non-human. Human feeder layers potentially contaminate ES cells with allogeneic proteins or living cells, and the potential for contamination by infectious agents exists. Similar undesirable properties exist when non-human feeder cells are used. Eliminating feeder cells has not been successful.
- ES cells When cultured in a standard culture environment in the absence of mouse embryonic fibroblasts as feeder cells, ES cells rapidly differentiate or fail to survive. Attempts have been made to replace the feeder or support cells using cell-free components or at least avoid non-human components or cells. While some replacements have shown shortterm promising results, such attempts have proven insufficient to support robust, continued propagation.
- WO/9920741 describes the growth of ES cells in a nutrient serum effective to support the growth of primate-derived primordial stem cells and a substrate of feeder cells or an extracellular matrix component derived from feeder cells.
- the medium further includes non-essential amino acids, an anti-oxidant, and growth factors that are either nucleosides or a pyruvate salt.
- US 6,642,048 reports growth of ES cells in feeder-free culture, using conditioned medium from such cells.
- US 6,800,480 describes a cell culture medium for growing primate-derived primordial stem cells comprising a low osmotic pressure, low endotoxin basic medium comprising a nutrient serum and an extracellular matrix derived from the feeder cells.
- the medium further includes non-essential amino acids, an anti-oxidant (for example, beta-mercaptoethanol), and, optionally, nucleosides and a pyruvate salt. Need exists for better medium that supports the long-term propagation of ES cells in a pluripotent state.
- methods for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof are provided by growing the human embryonic stem (ES) cells in a culture medium comprising a feeder layer of umbilical cord blood stem cells, medium comprising secreted proteins from umbilical cord stem cells, or the combination thereof.
- the umbilical cord blood stem cells are adherent, CD45 neg , HLA class II neg stem cells.
- the adherent, CD45 neg , HLA class II neg stem cells are CD34 neg , CD106 neg , CD44 pos and CD90 pos .
- the feeder layer of umbilical cord stem cells is treated to halt cell division.
- a substrate is provided such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the substrate is an extracellular matrix, such as may be obtained from human embryonic germ cell derivatives, human umbilical cord blood stem cells, human mesenchymal stem cells, or human fibroblasts.
- a composition is provided for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof comprising a feeder layer of human umbilical cord blood stem cells, secreted proteins from human umbilical cord blood stem cells, or the combination thereof.
- the umbilical cord blood stem cells are adherent, CD45 neg , HLA class II neg stem cells. In another embodiment, the adherent, CD45 neg , HLA class II neg stem cells are C£34 neg , CD106 neg , CD44 pos and CD90 pos . In another embodiment, the umbilical cord blood stem cells are treated to halt cell division. In another embodiment, the composition further comprises a substrate such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- a substrate such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the substrate is extracellular matrix, such as but not limited to that obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord stem cells or human fibroblasts.
- a kit is provided for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof, the kit comprising a first container of secreted proteins from human umbilical cord stem cells, a second container of substrate, and instructions for the use thereof.
- the human umbilical cord blood stem cells are adherent, CD45 neg , HLA class II neg stem cells.
- the adherent, CD45 neg , HLA class II neg stem cells are CD34 neg , CD106 neg , CD44 pos and CD90 pos .
- the substrate is by way of non-limiting example collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the substrate is extracellular matrix, such as but not limited to extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts.
- a composition comprising pluripotent human embryonic stem (ES) cells and secreted proteins from human umbilical cord blood stem cells, in combination with a substrate.
- ES human embryonic stem
- the umbilical cord blood stem cells are - A -
- the adherent, CD45 neg , HLA class II neg stem cells are CD34 neg , CD106 neg , CD44 pos and CD90 pos .
- the substrate is by way of non-limiting example, collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the substrate is extracellular matrix, such as but not limited to extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts
- a composition comprising pluripotent human embryonic stem (ES) cells and human umbilical cord blood stem cells.
- the umbilical cord blood stem cells are adherent, CD45 neg , HLA class II neg stem cells.
- the adherent, CD45 neg , HLA class II neg stem cells are CD34 neg , CD106 neg , CD44 pos and CD90 Pos .
- the human umbilical cord stem cells are treated to halt cell division.
- the composition further comprises a substrate, such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the substrate is extracellular matrix, such as but not limited to extracellular matrix obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts.
- cultured pluripotent human embryonic stem (ES) cells are provided that are obtained by the process of 1) providing a culture medium comprising a composition as described above, 2) introducing human embryonic stem cells thereto; and 3) growing the human embryonic stem cells therein to produce cultured pluripotent human embryonic stem cells.
- a method for obtaining a pluripotent human embryonic cell line comprising the steps of 1) isolating cells from the inner cell mass of a pre- implantation embryo, 2) introducing the cells of (1) into a culture medium comprising a composition described above, 3) growing the human embryonic stem cells over several passages in the culture medium, thereby obtaining a human embryonic cell line derived from the pre- implantation embryo.
- DETAILED DESCRIPTION OF THE PRESENT INVENTION loon
- ES cell can be derived from blastocyst inner mass cells and maintained in a pluripotent state using mouse feeder cell layers and conditioned medium from mouse feeder cells
- use of any mouse products at any point during the preparation of ES cells for human therapy has adverse regulatory implications.
- the inventors herein in an effort to identify substitutes for mouse embryo fibroblasts in deriving and maintaining ES cells, discovered that stem cells obtained from umbilical cord blood, and in one non-limiting embodiment, cells with a CD45 neg , HLA class II neg phenotype, provide the necessary feeder layer to support the derivation and propagation of ES cells.
- the cells have a CD34 neg , CD106 neg and CD44 pos and CD90 pos phenotype.
- human umbilical cord stem cells comprise the necessary components to permit both the derivation and propagation of ES cells in the absence of any mouse-derived materials (both cells and secreted proteins including extracellular matrix).
- human umbilical cord stem cells can be used as feeder layers for ES cells, used to produce conditioned medium for ES cells, used to produce extracellular matrix for ES cells, or any combination thereof.
- ES cells grown in accordance with the teachings herein maintain pluripotency.
- ES cells did not differentiate at the colony edges or center, and remained undifferentiated.
- ES cells grown as described herein readily disaggregated from the feeder layers after trypsin treatment, affording an easier method for recovering cells from culture than when other feeder layers are used.
- the collagen I is human type I collagen.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the substrate comprises any synthetic or biosynthetic cell adhesion molecule or a mixture thereof.
- the aforementioned substrates such as collagen I and f ⁇ bronectin or superfibronectin can be purchased as purified proteins or proteoglycans from any number of suppliers (such as Sigma Chemical Company, Alternative Research or Research Diagnostics Inc.) or prepared and purified in the laboratory.
- Fibronectin is an extracellular matrix protein that is important in development, wound healing and tumorigenesis. In the blood it is dimeric, but in tissues forms disulphide crosslinked fibrils.
- Superfibronectin is derived using a fragment from the first type-Ill repeat of fibronectin which binds to fibronectin and induces spontaneous disulphide crosslinking of the molecule into multimers of high relative molecular mass which resemble matrix fibrils. Treatment of fibronectin with this inducing fragment converts fibronectin into a form that has greatly enhanced adhesive properties (hence the term superfibronectin) and which suppresses cell migration [14].
- the aforementioned method further comprises the use of an extracellular matrix.
- Extracellular matrix may be obtained from normal cells or immortalized cell lines. Non-limiting examples include extracellular matrix from human embryonic germ (EG) cell derivatives, such as from human embryoid body-derived cells. Non-limiting examples of such cells include LVEC cells or SDEC cells. In another embodiment, the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix.
- human extracellular matrix is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- human extracellular matrix can be obtained from any human cell type.
- compositions are provided therefor.
- Such compositions can comprise a feeder layer of human umbilical cord stem cells, optionally in combination with secreted proteins from such cells, optionally in combination with a substrate.
- the human umbilical cord stem cells can be cells with a CD45 neg , HLA class II neg phenotype, or in a further embodiment the cells have a CD34 neg , CD106 neg and CD44 pos and CD90 pos phenotype.
- the feeder layer cells are treated to halt cell division, such as by exposure to gamma radiation or exposure to mitomycin.
- Conditioned medium can be obtained from the growth of the aforementioned cells in culture medium.
- the substrate optionally present in the aforementioned composition can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the collagen I is human type I collagen.
- Other synthetic or biosynthetic adhesion molecules may also be used.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the substrate is an extracellular matrix, such as that obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells.
- the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix.
- a kit for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof, the kit comprising a first container secreted proteins from human umbilical cord stem cells, a second container of substrate, and instructions for the use thereof.
- the human umbilical cord stem cells are cells with a CD45 neg , HLA class II neg phenotype.
- the cells have a CD34 neg , CD106 neg and CD44 pos and CD90 pos phenotype.
- the substrate can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the collagen I is human type I collagen.
- Other synthetic or biosynthetic adhesion molecules or mixtures may also be used.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the substrate can be an extracellular matrix, such as that obtained from human embryonic germ (EG) cell derivatives, for example, human embryoid body-derived cells such as but not limited to LVEC cells or SDEC cells.
- the extracellular matrix can be EHS mouse sarcoma basement membrane or human extracellular matrix.
- Another embodiment of the invention is a composition comprising pluripotent human embryonic stem (ES) cells and secreted proteins from human umbilical cord stem cells.
- the human umbilical cord stem cells are cells with a CD45 neg , HLA class II neg phenotype.
- the cells have a CD34 neg , CD106 neg and CD44 p0S and CD90 pos phenotype.
- the composition can further comprise a substrate, such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the collagen I is human type 1 collagen.
- the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the composition can include an extracellular matrix.
- the extracellular matrix can be obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells.
- the extracellular matrix can be EHS mouse sarcoma basement membrane or human extracellular matrix.
- compositions comprising pluripotent human embryonic stem (ES) cells and human umbilical cord stem cells.
- the human umbilical cord stem cells are cells with a CD45 neg , HLA class II neg phenotype.
- the cells have a CD34 neg , CD106 neg and CD44 pos and CD90 pos phenotype.
- the composition can further comprise a substrate, such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- collagen I is human type 1 collagen.
- the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the composition can include an extracellular matrix.
- the extracellular matrix can be obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells.
- the extracellular matrix can be EHS mouse sarcoma basement membrane or human extracellular matrix.
- cultured pluripotent human embryonic stem (ES) cells can be obtained by the process of 1 ) providing a culture medium comprising secreted proteins from human umbilical cord stem cells, together with a substrate, 2) introducing human embryonic stem (ES) cells thereto; and 3) growing the human embryonic stem (ES) cells therein to produce cultured pluripotent human embryonic stem cells.
- the human umbilical cord stem cells are cells with a CD45 neg , HLA class II neg phenotype.
- the cells have a CD34 neg , CD106 neg and CD44 pos and CD90 pos phenotype.
- human umbilical cord stem cells are included in the cultures.
- the substrate can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the collagen I is human type 1 collagen.
- the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof.
- a substrate of human origin is used in order to avoid the presence of non- human components in ES cultures, but for purposes other than human therapeutic uses, non- human components may be present.
- the substrate is extracellular matrix, for example, extracellular matrix is obtained from embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells, such as LVEC cells or SDEC cells.
- cultured pluripotent human embryonic stem (ES) cells can be obtained by the process of 1) providing a culture medium comprising human umbilical cord stem cells, together with a substrate, 2) introducing human embryonic stem (ES) cells thereto; and 3) growing the human embryonic stem (ES) cells therein to produce cultured pluripotent human embryonic stem cells.
- the human umbilical cord stem cells are cells with a CD45 neg , HLA class II neg phenotype.
- the cells have a CD34 neg , CD106 neg and CD44 pos and CD90 pos phenotype.
- the human umbilical cord stem cells are treated to halt cell division, such as by exposure to gamma radiation or exposure to mitomycin.
- secreted proteins from human umbilical cord stem calls are included in the medium.
- the substrate can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the collagen I is human type 1 collagen.
- the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the substrate is extracellular matrix, for example, extracellular matrix is obtained from embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells, such as LVEC cells or SDEC cells.
- a method for obtaining a pluripotent human embryonic cell line comprising the steps of 1) isolating human cells from the inner cell mass of a pre-implantation embryo, 2) introducing the cells of (1) into a culture medium comprising a composition as described above; and 3) growing the human embryonic stem cells derived thereby over several passages in the culture medium, thereby obtaining a human embryonic cell line derived from the pre-implantation embryo.
- Such compositions can comprise a feeder layer of human umbilical cord stem cells, optionally in combination with secreted proteins from such cells, optionally in combination with a substrate.
- the human umbilical cord stem cells can be cells with a CD45 neg , HLA class II neg phenotype, or in a further embodiment the cells have a CD34 neg , CD 106 neg and CD44 pos and CD90 pos phenotype.
- the feeder layer cells are treated to halt cell division, such as by exposure to gamma radiation or exposure to mitomycin.
- Conditioned medium can be obtained from the growth of the aforementioned cells in culture medium and used together with or in place of the human umbilical cord stem cells.
- the substrate optionally present in the aforementioned composition can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
- the collagen I is human type I collagen.
- Other synthetic or biosynthetic adhesion molecules may also be used.
- a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present.
- the substrate is an extracellular matrix, such as that obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells.
- EG embryonic germ
- Non-limiting examples include LVEC cells or SDEC cells.
- the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix.
- the aforementioned substrates collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, singly or in any combination, are used in an embodiment wherein the substrate is a defined protein or combination of proteins. These proteins are readily available commercially or can be prepared in the laboratory following guidance in the art. Typically human proteins are used in the practice of the invention but this is not so limiting if human therapeutic use is not contemplated.
- Extracellular Matrix can be purchased or prepared from cells in accordance with teachings in the art.
- One example of a mouse extracellular matrix favored in work prior to the invention described herein is EHS mouse sarcoma basement membrane, manufactured by BD Biosciences (San Jose, California) and sold under the name MATRIGEL.
- a human extracellular matrix is also commercially available from BD Biosciences.
- the invention is carried out using type I collagen.
- extracellular matrix produced by embryonic germ (EG) cell derivatives, such as SDEC and LVEC cells as described herein can be used.
- EG embryonic germ
- the substrate comprises any synthetic or biosynthetic cell adhesion molecule.
- the substrates described above fragments and peptides thereof capable of supporting growth of ES cells are further embodiments of the invention.
- a peptide comprising the tripeptide RGD is useful as a substrate for the purposes herein described.
- Extracellular matrix from human embryonic germ cell derivatives may be used as a source of the extracellular matrix that supports derivation and growth of ES cells.
- EG cells can be generated and cultured essentially as described in U.S. Pat. No. 6,090,622.
- the starting material for isolating cultured embryonic germ (EG) cells are tissues and organs comprising primordial germ cells (PGCs).
- PGCs may be isolated over a period of about 3 to 13 weeks post- fertilization (e.g., about 9 weeks to about 11 weeks from the last menstrual period) from embryonic yolk sac, mesenteries, gonadal anlagen, or genital ridges from a human embryo or fetus.
- gonocytes of later testicular stages can also provide PGCs.
- the PGCs are cultured on mitotically inactivated fibroblast cells (e.g., STO cells) under conditions effective to derive EGs.
- the resulting human EG cells resemble murine ES or EG cells in morphology and in biochemical histotype.
- the resulting human EG cells can be passaged and maintained for at least several months in culture.
- ES cells grown according to the teachings herein maintain pluripotency in culture and do not show differentiation at the edges or center of colonies. Thus, pluripotency is maintained.
- harvesting of cells by trypsinization affords ready disaggregation of colonies and easy removal from feeder layers of human embryonic stem cells.
- Cell-Based Therapies Transplantation of ES Cells.
- the invention also provides methods for growth of unmodified or genetically modified ES cells or their differentiated progeny for use in human transplantations in the fetus, newborns, infants, children, and/or adults.
- One example of this use is therapeutic supplementation of metabolic enzymes for the treatment of autosomal recessive disorders.
- production of homogentisic acid oxidase by transplanted ES differentiated cells into the liver could be used in the treatment of alkaptonuria (for review of this disorder, see McKusick, Heritable Disorders of Connective Tissue. 4th ed., St. Louis, CV. Mosby Co., 1972).
- ornithine transcarbamylase expression could be augmented to treat the disease caused by its deficiency.
- glucose-6-phosphate dehydrogenase expression could be augmented in erythrocyte precursors or hematopoietic precursors to allow expression in red blood cells in order to treat G6PD deficiency (favism, acute hemolytic anemnia).
- Treatments of some diseases require addition of a composition or the production of a circulating factor.
- One example is the production of alphal-antitrypsin in plasma to treat a deficiency that causes lung destruction, especially in tobacco smokers.
- Other examples of providing circulating factors are the production of hormones, growth factors, blood proteins, and homeostatic regulators.
- differentiated ES cells obtained or grown as described herein are used to repair or supplement damaged or degenerating tissues or organs. This may require that the cells are first differentiated in vitro into lineage-restricted stem cells or terminally differentiated cells.
- the ES cell obtained or grown as described herein can be genetically manipulated to reduce or remove cell-surface molecules responsible for transplantation rejection in order to generate universal donor cells.
- the mouse Class I histocompatibility (MHC) genes can be disabled by targeted deletion or disruption of the beta- microglobulin gene (see, e.g., Zijlstra, Nature 342:435-438, 1989). This significantly improves renal function in mouse kidney allografts (see, e.g., Coffinan, J. Immunol.
- cells and tissues from ES cells and cell lines grown in accordance with the invention can also be manipulated to eliminate or reduce other cell-surface marker molecules that induce tissue/organ graft rejection. All such modifications that reduce or eliminate allogenic (e.g., organ graft) rejection when employing cells, cell lines (or any parts or derivatives thereof) derived from the cells of the present invention are embodied herein.
- Tissue Engineering The invention provides human cells and methods that can be used to produce or reconstruct a tissue or organ, including in vitro or vivo regeneration, and engineering of artificial organs or organoids.
- the ES cells grown in accordance with the invention are pre-cultured under conditions that promote generation of a desired differentiated, or restricted, cell lineage.
- the culture conditions can also be manipulated to generate a specific cell architecture, such as the three-dimensional cellular arrangements and relationships seen in specialized structures, such as neuromuscular junctions and neural synapses, or organs, such as livers, and the like.
- These conditions can include the use of bioreactor systems to influence the generation of the desired cell type.
- Bioreactor systems are commonly used in the art of tissue engineering to create artificial tissues and organs. Some bioreactor systems are designed to provide physiological stimuli similar to those found in the natural environments. Others are designed to provide a three-dimensional architecture to develop an organ culture.
- compositions including bioreactors, scaffolds, culture devices, three-dimensional cell culture systems, and the like
- production of cells, tissues and organs for transplantation may require combinations of genetic modifications, in vitro differentiation, and defined substrate utilization of the cells of the invention to generate the desired altered cell phenotype and, if a tissue or organ is to be generated, the necessary three-dimensional architecture required for functionality.
- a replacement organ may require vasculature to deliver nutrients, remove waste products, and deliver products, as well as specific cell-cell contacts.
- a diverse cell population will be required to carry out these and other specialized functions, such as the capacity to repopulate by lineage-restricted stem cells.
- ES cells obtained or grown in accordance with the invention include generation of non-cellular structures such as bone or cartilage replacements.
- 100391 Human ES cells obtained or grown in accordance with the invention can also be implanted into the central nervous system (CNS) for the treatment of disease or physical brain injury, such as ischemia or chemical injury; animal models can also be used to test the efficacy of this treatment, e.g., injection of compounds like 60HAD, or, fluid percussion injury can serve as a model for human brain injury.
- the efficacy of administration of stem cells of the invention is determined by the recovery of improvement of injury related deficits, e.g., motor or behavioral deficits.
- Human ES cells obtained in accordance with the invention can also be implanted into the central nervous system (CNS) for the treatment of amyotropic lateral sclerosis (ALS); animal models can also be used to test the efficacy of this treatment, e.g., the SODI mutant mouse model.
- Human ES cells of the invention can also be implanted into the central nervous system (CNS) for the treatment of Alzheimer's disease; one animal model that can be used to test the efficacy of this treatment is the mutant presenilin I mouse.
- Human ES cells can also be implanted into the central nervous system (CNS) for the treatment of Parkinson's disease, efficacy of this treatment can be assessed using, e.g., the MPTP mouse model.
- Human ES cells grown in accordance with the invention can also be used to treat diseases of cardiac, skeletal or smooth muscles; cells can be directly injected into or near desired sites. The survival and differential of these cells can be determined by monitoring the expression of appropriate markers, e.g, human muscle-specific gene products (see, e.g., Klug, 1996, supra; Soonpaa, Science 264:98-101, 1994; Klug, Am. J. Physiol. 269:H1913-H1921, 1995; implanting fetal cardiomyocytes and mouse ES-derived cells), for exemplary protocols. 10041) Human ES cells grown in accordance with the invention can also be used to treat diseases of the liver or pancreas.
- appropriate markers e.g., human muscle-specific gene products (see, e.g., Klug, 1996, supra; Soonpaa, Science 264:98-101, 1994; Klug, Am. J. Physiol. 269:H1913-H1921, 1995; implanting fetal cardiomyocytes and
- Cells can be directly injected into the hepatic duct or the associated vasculature. Similarly, cells could be delivered into the pancreas by direct implantation or by injection into the vasculature. Cells engraft into the liver or pancreatic parenchyma, taking on the functions normally associated with hepatocytes or pancreatic cells, respectively. As with other implantations, cell survival, differentiation and function can be monitored by, e.g., immunohistochemical staining, or PCR, of specific gene products.
- Human ES cells of the invention can also be used to treat diseases, injuries or other conditions in or related to the eyes.
- Cells can be directly injected into the retina, optic nerve or other eye structure.
- cells differentiate into retinal epithelia, nerve cells or other related cell types.
- cell survival, differentiation and function can be monitored by, e.g., immunohistochemical staining, or PCR, of specific gene products.
- Human ES cells of the invention can also be used to treat vascular diseases or other related conditions by repopulation of the vasculature with, e.g., vascular endothelium, vascular smooth muscle and other related cell types.
- an injured vein or artery is treated by implantation of ES cells of the invention; these cells re-populate the appropriate injured sites in the vasculature.
- the cells can be implanted/injected into the general circulation, by local ("regional") injection (e.g., into a specific organ) or by local injection, e.g., into a temporarily isolated region.
- a reconstructed or a completely new vasculature can be constructed on a biomatrix or in an organotypic culture, as described herein.
- Human ES cells of the invention can also be used to repopulate bone marrow, e.g., in situations where bone marrow has been ablated, e.g., by irradiation for the treatment of certain cancers. Protocols for these treatments can be optimized using animal models, e.g., in animals whose endogenous bone marrow has been ablated. EBD cells of the invention can be injected into the circulatory system or directly into the marrow space of such an animal (e.g., a rodent model). Injection of the human cells of the invention would allow for the re-population of bone marrow, as well as engraftment of a wide range of tissues and organs.
- the efficacy of the cells can be monitored by tracking animal survival, as without bone marrow re-population the animal will die.
- the hematopoietic fate of the injected cells also can be examined by determining the type and amount to human cell colonies in the spleen.
- the human ES cells obtained or grown in accordance with the invention can be used in organotypic co-culture.
- This system offers the benefits of direct cell application and visualization found in in vitro methods with the complex and physiologically relevant milieu of an in vivo application.
- a section of tissue or an organ specimen is placed into a specialized culture environment that allows sufficient nutrient access and gas exchange to maintain cellular viability.
- bioengineered matrices or lattice structures can be populated by single or successive application of these human cells.
- the matrices can provide structural support and architectural cues for the repopulating cells.
- ES cells or cell lines obtained or grown in accordance with the invention and cells, tissues, structures and organs derived from them can be used for toxicological, mutagenic, and/or teratogenic in vitro tests and as biosensors.
- the invention provides engineered cells, tissues and organs for screening methods to replace animal models and form novel human cell-based tests. These systems are useful as extreme environment biosensors.
- ES cells or cell lines and cells, tissues, structures and organs derived from them can be used to build physiological biosensors; for example, they can be incorporated in known system, as described, e.g., in U.S. Pat. Nos. 6,130,037; 6,129,896; and 6,127,129.
- the invention also provides a method for identifying a compound that modulates an ES cell function in some way (e.g., modulates differentiation, cell proliferation, production of factors or other proteins, gene expression).
- the method includes: (a) incubating components comprising the compound and ES cell(s) grown under conditions described herein, sufficient to allow the components to interact; and (b) determining the effect of the compound on the ES cell(s) before and after incubating in the presence of the compound.
- Compounds that ES cell function include peptides, peptidomimetics, polypeptides, chemical compounds and biologic agents. Differentiation, gene expression, cell membrane permeability, proliferation and the like can be determined by methods commonly used in the art.
- modulation refers to inhibition, augmentation, or stimulation of a particular cell function.
- ES Cells as Sources of Macromolecules.
- the ES cells and cell lines obtained or grown in accordance with the invention can also be used in the biosynthetic production of macromolecules.
- products that could be produced are blood proteins, hormones, growth factors, cytokines, enzymes, receptors, binding proteins, signal transduction molecules, cell surface antigens, and structural molecules.
- Factors produced by undifferentiated, differentiating, or differentiated ES cells would closely simulate the subtle folding and secondary processing of native human factors produced in vivo.
- Biosynthetic production by ES cells and cell lines can also involve genetic manipulation followed by in vitro growth and/or differentiation.
- Biosynthetic products can be secreted into the growth media or produced intracellularly or contained within the cell membrane, and harvested after cell disruption. Genetic modification of the gene coding for the macromolecule to be biosynthetically produced can be used to alter its characteristics in order to supplement or enhance functionality. In this way, novel enhanced-property macromolecules can be created and pharmaceuticals, diagnostics, or antibodies, used in manufacturing or processing, can be produced.
- compositional proteins that may be produced in this manner include, e.g., blood proteins (clotting factors VII and IX, complement factors or components, hemoglobins or other blood proteins and the like); hormones (insulin, growth hormone, thyroid hormone, gonadotrophins, PMSG trophic hormones, prolactin, oxytocin, dopamine, catecholamines and the like); growth factors (EGF, PDGF, NGF, IGF and the like); cytokines (interleukins, CSF, GMCSF, TNF, TGF.alpha., TGF.beta., and the like); enzymes (tissue plasminogen activator, streptokinase, cholesterol biosynthetic or degradative, digestive, steroidogenic, kinases, phosphodiesterases, methylases, de-methylases, dehydrogenases, cellulases, proteases, lipases, phospholipases, aromatase, cytoplasminogen activator, str
- ES cells grown in accordance with the teachings herein are used to optimize the in vitro culture conditions for differentiating the cells.
- High-throughput screens can be established to assess the effects of media components, exogenous growth factors, and attachment substrates.
- substrates include viable cell feeder layers, cell extracts, defined extracellular matrix components, substrates which promote three-dimensional growth such as methylcellulose and collagen, novel cell attachment molecules, and/or matrices with growth factors or other signaling molecules embedded within them. This last approach may provide the spatial organization required for replication of complex organ architecture (as reviewed in Saltzman, Nature Medicine 4:272-273, 1998).
- Frozen human umbilical cord blood mononuclear cells were received from Cambrex, thawed according to manufacturer's recommendation and placed into 3 T75 flasks with 12 ml each of USSC media (low glucose DMEM with Glutamax, Invitrogen 10567-014), 10 '7 M dexamethasone (Sigma), 100 U/ml penicillin and 0.1 mg/ml streptomycin. Media was changed after 48 hrs then every 2-3 days following. On day 14, proliferating cells were passaged 1 :3 into new flasks by using 0.25% trypsin/EDTA and neutralized by trypsin neutralization solution. Every 5 to 7 days cells were similarly passaged. Aliquots of these umbilical cord stem cells (herein abbreviated "UCSC”) were cryopreserved at several passages.
- USSC media low glucose DMEM with Glutamax, Invitrogen 10567-014
- 10 '7 M dexamethasone Sigma
- the phenotype of passage 5 UCSC was CD31 (2%), CD34 (0%), CD44 (97%), CD50 (0%), CD71 (47%), CD90, (96%), CD 106 (0%).
- Passage 6 UCSC were plated onto a collagen I + Gelatin coated 6-well plate. Each well contained between 0.2 to 1 million cells. Cells were irradiated at 3500 RAD. HuES-2 (Harvard line, Passage 27) cells were plated into the coated wells and the media was changed to HuES media (Cowan, CA. et. al, 2004). Typical hES colonies were observed at all UCSC densities, so 0.25 million cells per well was chosen for all future work. hES cells were passaged every 3-5 days using 0.05 trypsin/EDTA. HuES-2 was at passage 38 on (11 passages) at the time of this writing.
- HuES-2 formed very large colonies on UCSC (up to 2000 microns), where cells in parallel growing on MEF were no more than 500 microns. It was also observed that huES-2 cells did not spontaneously differentiate at the colony margins or middle, as is observed with large colonies growing on MEF.
- UCSC mouse embryo fibroblasts
- huES-2 cells did not spontaneously differentiate at the colony margins or middle, as is observed with large colonies growing on MEF.
- large HuES-2 cell colonies disaggregated readily into uniform small multicellular colonies and easily lifted off from the UCSC feeder layer. This was unique to the cells growing on UCSC, and cells growing on MEF were much more difficult to remove from the feeder layer and trypsin digestion resulted in generating more single cells and small cell clumps.
- HuES-2 were observed growing on Matrigel in the presence of UCSC conditioned media.
- This conditioned media was prepared by plating UCSC at 1 million cells per 10cm plate into 12 mis of HuES media. After 24 hrs media was harvested and sterile filtered. Prior to use on huES-2 cells, 8ng/ml FGF2 was added to the conditioned media.
- UCSC conditioned media can support the growth of HuES-e cells growth on Matrigel, but at a reduced cell proliferation rate. This is commonly observed when adapting cells to new environments.
- HuES-2 cells grown in the presence of UCSC conditioned media had reduced spontaneous differentiation as compared to MEF conditioned media, to the point that there were no observable differentiated cells.
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Abstract
Methods for deriving and cultivating human embryonic stem (ES) cells and maintaining their pluripotency in culture is provided by utilizing human umbilical cord stem cells or secreted proteins obtained from the culture medium of human umbilical cord stem cells.
Description
COMPOSITIONS AND METHODS FOR GROWING EMBRYONIC STEM CELLS
BACKGROUND OF THE INVENTION ioooii Human embryonic Stem (HES) cells are pluripotent cells that have the ability to differentiate into almost all adult cell types therefore hold great promise for regenerative medicine. However, to maintain the HES cells in an undifferentiated state requires the use of mouse embryonic fibroblast feeder layer (Thompson JA et al., 1998). Because the use of mouse feeder cells is associated with contamination risks such as pathogen transmission and viral infection (Richards M et al., 2002), HES cells derived and cultured on mouse feeder cells are not suitable for clinical application. Much effort has been put into the development and refinement of xeno-free culture system. Several feeder system derived from human origin have been developed including human fetal skin fibroblasts, adult fibroblasts (Richards et al, 2002), foreskin fibroblasts (Amit et al, 2003) and human embryonic fibroblasts from differentiated HES (Stojkovic P et al., 2005). Richards et al have compared 11 various human feeder cells for the culture of human embryonic stem cells and found that feeder cells derived from human fetal tissues (3 independent cultures) are superior to cells from human adult tissues (7 independent cultures) (Richards et al., 2003). Because the fetal tissues were derived from human abortuses, fetal derived feeder cells will not be easily accepted. Also, because current existing HES cells are all derived from mouse feeder layer, feeder cells from them will be considered as not biologically safe as well. iooo2) Embryonic stem (ES) cells are derived from the inner cell mass of preimplantation embryos [15-17]. ES cells are pluripotent and are capable of differentiating into cells derived from all three embryonic germ layers. The traditional method used to derive mouse and human embryonic stem (ES) cells involves the use of support cells termed feeder cells or layers. These support cells provide a poorly understood set of signals that promote the conversion from blastocyst inner cell mass (ICM) cells to proliferating ES cells. Most commonly, primary cultures of mouse embryo fibroblasts are used as support cells for both mouse and human ES cultures. The requirement for support cells is not lost following derivation, and ES cell cultures are most commonly maintained on feeder layers until differentiation is desired. Since the signals supplied by support cells are not understood, it has been difficult to find substitute cell types or to remove cells altogether. For research purposes, support cells provide a source of experimental variability and cellular contamination to ES cultures but are not disabling in their impact.
[0003] However, a major obstacle to the use of ES cells for human therapy is the requirement for feeder cells, whether human or non-human. Human feeder layers potentially contaminate ES cells with allogeneic proteins or living cells, and the potential for contamination by infectious agents exists. Similar undesirable properties exist when non-human feeder cells are used. Eliminating feeder cells has not been successful. When cultured in a standard culture environment in the absence of mouse embryonic fibroblasts as feeder cells, ES cells rapidly differentiate or fail to survive. Attempts have been made to replace the feeder or support cells using cell-free components or at least avoid non-human components or cells. While some replacements have shown shortterm promising results, such attempts have proven insufficient to support robust, continued propagation. For example, WO/9920741 describes the growth of ES cells in a nutrient serum effective to support the growth of primate-derived primordial stem cells and a substrate of feeder cells or an extracellular matrix component derived from feeder cells. The medium further includes non-essential amino acids, an anti-oxidant, and growth factors that are either nucleosides or a pyruvate salt. US 6,642,048 reports growth of ES cells in feeder-free culture, using conditioned medium from such cells. US 6,800,480 describes a cell culture medium for growing primate-derived primordial stem cells comprising a low osmotic pressure, low endotoxin basic medium comprising a nutrient serum and an extracellular matrix derived from the feeder cells. The medium further includes non-essential amino acids, an anti-oxidant (for example, beta-mercaptoethanol), and, optionally, nucleosides and a pyruvate salt. Need exists for better medium that supports the long-term propagation of ES cells in a pluripotent state.
SUMMARY OF THE INVENTION
[ooo4| In one embodiment, methods for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof are provided by growing the human embryonic stem (ES) cells in a culture medium comprising a feeder layer of umbilical cord blood stem cells, medium comprising secreted proteins from umbilical cord stem cells, or the combination thereof. In one embodiment, the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells. In another embodiment, the adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos. In a further embodiment, the feeder layer of umbilical cord stem cells is treated to halt cell division. In another embodiment, a substrate is provided such as
but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. In another embodiment, the substrate is an extracellular matrix, such as may be obtained from human embryonic germ cell derivatives, human umbilical cord blood stem cells, human mesenchymal stem cells, or human fibroblasts. 10005] In another embodiment, a composition is provided for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof comprising a feeder layer of human umbilical cord blood stem cells, secreted proteins from human umbilical cord blood stem cells, or the combination thereof. In one embodiment, the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells. In another embodiment, the adherent, CD45neg, HLA class IIneg stem cells are C£34neg, CD106neg, CD44pos and CD90pos. In another embodiment, the umbilical cord blood stem cells are treated to halt cell division. In another embodiment, the composition further comprises a substrate such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. In another embodiment, the substrate is extracellular matrix, such as but not limited to that obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord stem cells or human fibroblasts. iooo6| In another embodiment, a kit is provided for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof, the kit comprising a first container of secreted proteins from human umbilical cord stem cells, a second container of substrate, and instructions for the use thereof. In one embodiment, the human umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells. In another embodiment, the adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos. In another embodiment, the substrate is by way of non-limiting example collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. In another embodiment, the substrate is extracellular matrix, such as but not limited to extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts.
10007) In another embodiment, a composition is provided comprising pluripotent human embryonic stem (ES) cells and secreted proteins from human umbilical cord blood stem cells, in combination with a substrate. In one embodiment, the umbilical cord blood stem cells are
- A -
adherent, CD45neg, HLA class IIneg stem cells. In another embodiment, the adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos. In another embodiment, the substrate is by way of non-limiting example, collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. In another embodiment, the substrate is extracellular matrix, such as but not limited to extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts
Iooo8| In another embodiment, a composition is provided comprising pluripotent human embryonic stem (ES) cells and human umbilical cord blood stem cells. In one embodiment, the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells. In another embodiment, the adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90Pos. In another embodiment, the human umbilical cord stem cells are treated to halt cell division. In another embodiment, the composition further comprises a substrate, such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. In another embodiment, the substrate is extracellular matrix, such as but not limited to extracellular matrix obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts. iooo9| In another embodiment, cultured pluripotent human embryonic stem (ES) cells are provided that are obtained by the process of 1) providing a culture medium comprising a composition as described above, 2) introducing human embryonic stem cells thereto; and 3) growing the human embryonic stem cells therein to produce cultured pluripotent human embryonic stem cells.
[ooioi In another embodiment, a method for obtaining a pluripotent human embryonic cell line is provided comprising the steps of 1) isolating cells from the inner cell mass of a pre- implantation embryo, 2) introducing the cells of (1) into a culture medium comprising a composition described above, 3) growing the human embryonic stem cells over several passages in the culture medium, thereby obtaining a human embryonic cell line derived from the pre- implantation embryo.
DETAILED DESCRIPTION OF THE PRESENT INVENTION loon] In the following detailed description, numerous specific details are set forth in order to provide a thorough understanding of the invention. However, it will be understood by those skilled in the art that the present invention may be practiced without these specific details, hi other instances, well-known methods, procedures, and components have not been described in detail so as not to obscure the present invention. iooi2| While the therapeutic and other applications of embryonic stem (ES) cells are projected to have a major impact on the future of health care and the treatment of a large number of diseases, methods for deriving ES cells from the embryo and maintaining the pluripotency of thus-derived ES cells in a medium readily compatible with human administration has hindered progress in this field. While ES cell can be derived from blastocyst inner mass cells and maintained in a pluripotent state using mouse feeder cell layers and conditioned medium from mouse feeder cells, use of any mouse products at any point during the preparation of ES cells for human therapy has adverse regulatory implications. The inventors herein, in an effort to identify substitutes for mouse embryo fibroblasts in deriving and maintaining ES cells, discovered that stem cells obtained from umbilical cord blood, and in one non-limiting embodiment, cells with a CD45neg, HLA class IIneg phenotype, provide the necessary feeder layer to support the derivation and propagation of ES cells. In another embodiment the cells have a CD34neg, CD106neg and CD44pos and CD90pos phenotype. Furthermore, the inventors herein also found secreted proteins produced by the aforementioned human umbilical cord stem cells comprise the necessary components to permit both the derivation and propagation of ES cells in the absence of any mouse-derived materials (both cells and secreted proteins including extracellular matrix). Thus, human umbilical cord stem cells can be used as feeder layers for ES cells, used to produce conditioned medium for ES cells, used to produce extracellular matrix for ES cells, or any combination thereof. iooi3] Moreover, as will be shown in the examples, ES cells grown in accordance with the teachings herein maintain pluripotency. Using either human umbilical cord stem cells as a feeder layer, or using their secreted proteins (conditioned medium) in the growth medium, ES cells did not differentiate at the colony edges or center, and remained undifferentiated. In another embodiment, ES cells grown as described herein readily disaggregated from the feeder layers
after trypsin treatment, affording an easier method for recovering cells from culture than when other feeder layers are used.
[ooi4| Other substrates that can be used in combination with feeder layers or conditioned medium include, by way of non-limiting example, collagen I, collagen IV, fϊbronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically, the collagen I is human type I collagen. Typically a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment, the substrate comprises any synthetic or biosynthetic cell adhesion molecule or a mixture thereof. 10015] The aforementioned substrates such as collagen I and fϊbronectin or superfibronectin can be purchased as purified proteins or proteoglycans from any number of suppliers (such as Sigma Chemical Company, Innovative Research or Research Diagnostics Inc.) or prepared and purified in the laboratory. Fibronectin is an extracellular matrix protein that is important in development, wound healing and tumorigenesis. In the blood it is dimeric, but in tissues forms disulphide crosslinked fibrils. Superfibronectin is derived using a fragment from the first type-Ill repeat of fibronectin which binds to fibronectin and induces spontaneous disulphide crosslinking of the molecule into multimers of high relative molecular mass which resemble matrix fibrils. Treatment of fibronectin with this inducing fragment converts fibronectin into a form that has greatly enhanced adhesive properties (hence the term superfibronectin) and which suppresses cell migration [14].
10016] In addition to the aforementioned substrates, other synthetic or biosynthetic adhesion molecules can be used, including fragments and peptides from the aforementioned proteins that support growth of ES cells. iooi7| In another embodiment, the aforementioned method further comprises the use of an extracellular matrix. Extracellular matrix may be obtained from normal cells or immortalized cell lines. Non-limiting examples include extracellular matrix from human embryonic germ (EG) cell derivatives, such as from human embryoid body-derived cells. Non-limiting examples of such cells include LVEC cells or SDEC cells. In another embodiment, the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix. As noted above, typically a human extracellular matrix is used in order to avoid the presence of non-human components in
ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In addition to the examples above human extracellular matrix can be obtained from any human cell type.
[ooi8| In addition to methods for growing ES cells and maintaining their pluripotency, compositions are provided therefor. Such compositions can comprise a feeder layer of human umbilical cord stem cells, optionally in combination with secreted proteins from such cells, optionally in combination with a substrate. The human umbilical cord stem cells can be cells with a CD45neg, HLA class IIneg phenotype, or in a further embodiment the cells have a CD34neg, CD106neg and CD44pos and CD90pos phenotype. In another embodiment, the feeder layer cells are treated to halt cell division, such as by exposure to gamma radiation or exposure to mitomycin. Conditioned medium can be obtained from the growth of the aforementioned cells in culture medium. The substrate optionally present in the aforementioned composition can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically, the collagen I is human type I collagen. Other synthetic or biosynthetic adhesion molecules may also be used. Typically a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment, the substrate is an extracellular matrix, such as that obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells. In another embodiment, the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix.
(ooi9| In yet another embodiment, a kit is provided for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof, the kit comprising a first container secreted proteins from human umbilical cord stem cells, a second container of substrate, and instructions for the use thereof. In one embodiment, the human umbilical cord stem cells are cells with a CD45neg, HLA class IIneg phenotype. In another embodiment the cells have a CD34neg, CD106neg and CD44pos and CD90pos phenotype. The substrate can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically the collagen I is human type I collagen. Other synthetic or biosynthetic adhesion molecules or mixtures may also be used. Typically a substrate of human origin is used in order to
avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment the substrate can be an extracellular matrix, such as that obtained from human embryonic germ (EG) cell derivatives, for example, human embryoid body-derived cells such as but not limited to LVEC cells or SDEC cells. The extracellular matrix can be EHS mouse sarcoma basement membrane or human extracellular matrix.
[0020] Another embodiment of the invention is a composition comprising pluripotent human embryonic stem (ES) cells and secreted proteins from human umbilical cord stem cells. In one embodiment, the human umbilical cord stem cells are cells with a CD45neg, HLA class IIneg phenotype. In another embodiment the cells have a CD34neg, CD106neg and CD44p0S and CD90pos phenotype. The composition can further comprise a substrate, such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically the collagen I is human type 1 collagen. In another embodiment, the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof. Typically a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment, the composition can include an extracellular matrix. The extracellular matrix can be obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells. The extracellular matrix can be EHS mouse sarcoma basement membrane or human extracellular matrix.
10021] Another embodiment of the invention is a composition comprising pluripotent human embryonic stem (ES) cells and human umbilical cord stem cells. In one embodiment, the human umbilical cord stem cells are cells with a CD45neg, HLA class IIneg phenotype. In another embodiment the cells have a CD34neg, CD106neg and CD44pos and CD90pos phenotype. The composition can further comprise a substrate, such as but not limited to collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically the collagen I is human type 1 collagen. In another embodiment, the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof. Typically a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures,
but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment, the composition can include an extracellular matrix. The extracellular matrix can be obtained from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells. The extracellular matrix can be EHS mouse sarcoma basement membrane or human extracellular matrix.
[0022| In another embodiment of the invention, cultured pluripotent human embryonic stem (ES) cells can be obtained by the process of 1 ) providing a culture medium comprising secreted proteins from human umbilical cord stem cells, together with a substrate, 2) introducing human embryonic stem (ES) cells thereto; and 3) growing the human embryonic stem (ES) cells therein to produce cultured pluripotent human embryonic stem cells. In one embodiment, the human umbilical cord stem cells are cells with a CD45neg, HLA class IIneg phenotype. In another embodiment the cells have a CD34neg, CD106neg and CD44pos and CD90pos phenotype. In one embodiment, human umbilical cord stem cells are included in the cultures. The substrate can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically, the collagen I is human type 1 collagen. In another embodiment, the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof. Typically a substrate of human origin is used in order to avoid the presence of non- human components in ES cultures, but for purposes other than human therapeutic uses, non- human components may be present. In another embodiment, the substrate is extracellular matrix, for example, extracellular matrix is obtained from embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells, such as LVEC cells or SDEC cells. |0023| In another embodiment of the invention, cultured pluripotent human embryonic stem (ES) cells can be obtained by the process of 1) providing a culture medium comprising human umbilical cord stem cells, together with a substrate, 2) introducing human embryonic stem (ES) cells thereto; and 3) growing the human embryonic stem (ES) cells therein to produce cultured pluripotent human embryonic stem cells. In one embodiment, the human umbilical cord stem cells are cells with a CD45neg, HLA class IIneg phenotype. In another embodiment the cells have a CD34neg, CD106neg and CD44pos and CD90pos phenotype. In another embodiment, the human umbilical cord stem cells are treated to halt cell division, such as by exposure to gamma radiation
or exposure to mitomycin. In another embodiment, secreted proteins from human umbilical cord stem calls are included in the medium. The substrate can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically, the collagen I is human type 1 collagen. In another embodiment, the substrate is a synthetic or biosynthetic adhesion molecule or a mixture thereof. Typically a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment, the substrate is extracellular matrix, for example, extracellular matrix is obtained from embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells, such as LVEC cells or SDEC cells.
[0024] In yet another embodiment of the invention, a method is provided for obtaining a pluripotent human embryonic cell line comprising the steps of 1) isolating human cells from the inner cell mass of a pre-implantation embryo, 2) introducing the cells of (1) into a culture medium comprising a composition as described above; and 3) growing the human embryonic stem cells derived thereby over several passages in the culture medium, thereby obtaining a human embryonic cell line derived from the pre-implantation embryo. Such compositions can comprise a feeder layer of human umbilical cord stem cells, optionally in combination with secreted proteins from such cells, optionally in combination with a substrate. The human umbilical cord stem cells can be cells with a CD45neg, HLA class IIneg phenotype, or in a further embodiment the cells have a CD34neg, CD 106neg and CD44pos and CD90pos phenotype. In another embodiment, the feeder layer cells are treated to halt cell division, such as by exposure to gamma radiation or exposure to mitomycin. Conditioned medium can be obtained from the growth of the aforementioned cells in culture medium and used together with or in place of the human umbilical cord stem cells. The substrate optionally present in the aforementioned composition can be collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof. Typically, the collagen I is human type I collagen. Other synthetic or biosynthetic adhesion molecules may also be used. Typically a substrate of human origin is used in order to avoid the presence of non-human components in ES cultures, but for purposes other than human therapeutic uses, non-human components may be present. In another embodiment, the substrate is an extracellular matrix, such as that obtained
from human embryonic germ (EG) cell derivatives, typically human embryoid body-derived cells. Non-limiting examples include LVEC cells or SDEC cells. In another embodiment, the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix. 10025] The following sections provide descriptions of each of the components of the present invention. They are intended to be exemplary only and non-limiting, and one of ordinary skill will recognize alternative means for achieving the same result within the spirit of the invention. [00261 Substrates. The aforementioned substrates collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, singly or in any combination, are used in an embodiment wherein the substrate is a defined protein or combination of proteins. These proteins are readily available commercially or can be prepared in the laboratory following guidance in the art. Typically human proteins are used in the practice of the invention but this is not so limiting if human therapeutic use is not contemplated.
10027) Extracellular Matrix. Extracellular matrix can be purchased or prepared from cells in accordance with teachings in the art. One example of a mouse extracellular matrix favored in work prior to the invention described herein is EHS mouse sarcoma basement membrane, manufactured by BD Biosciences (San Jose, California) and sold under the name MATRIGEL. A human extracellular matrix is also commercially available from BD Biosciences. Typically, the invention is carried out using type I collagen. In another embodiment, extracellular matrix produced by embryonic germ (EG) cell derivatives, such as SDEC and LVEC cells as described herein, can be used.
[0028] In another embodiment, the substrate comprises any synthetic or biosynthetic cell adhesion molecule. Among the substrates described above, fragments and peptides thereof capable of supporting growth of ES cells are further embodiments of the invention. In one embodiment, a peptide comprising the tripeptide RGD is useful as a substrate for the purposes herein described.
[0029] Extracellular matrix from human embryonic germ cell derivatives. In the practice of the invention, human embryonic germ (EG) cell derivatives may be used as a source of the extracellular matrix that supports derivation and growth of ES cells. EG cells can be generated and cultured essentially as described in U.S. Pat. No. 6,090,622. The starting material for isolating cultured embryonic germ (EG) cells are tissues and organs comprising primordial germ
cells (PGCs). For example, PGCs may be isolated over a period of about 3 to 13 weeks post- fertilization (e.g., about 9 weeks to about 11 weeks from the last menstrual period) from embryonic yolk sac, mesenteries, gonadal anlagen, or genital ridges from a human embryo or fetus. Alternatively, gonocytes of later testicular stages can also provide PGCs. In one embodiment, the PGCs are cultured on mitotically inactivated fibroblast cells (e.g., STO cells) under conditions effective to derive EGs. The resulting human EG cells resemble murine ES or EG cells in morphology and in biochemical histotype. The resulting human EG cells can be passaged and maintained for at least several months in culture.
100301 As noted above and in the examples, below, use of human embryonic stem cells as feeder cells or use of their secreted proteins as a growth medium affords additional benefits for the growth and harvesting of pluripotent ES cells, over other feeders cells or conditioned medium. In one embodiment, ES cells grown according to the teachings herein maintain pluripotency in culture and do not show differentiation at the edges or center of colonies. Thus, pluripotency is maintained. Furthermore, harvesting of cells by trypsinization affords ready disaggregation of colonies and easy removal from feeder layers of human embryonic stem cells. The various exemplary uses of ES cells described below benefit from the foregoing advantages provided by the teachings herein
Uses of ES cells derived or propagated as describe herein.
10031] Cell-Based Therapies: Transplantation of ES Cells. The invention also provides methods for growth of unmodified or genetically modified ES cells or their differentiated progeny for use in human transplantations in the fetus, newborns, infants, children, and/or adults. One example of this use is therapeutic supplementation of metabolic enzymes for the treatment of autosomal recessive disorders. For example, production of homogentisic acid oxidase by transplanted ES differentiated cells into the liver could be used in the treatment of alkaptonuria (for review of this disorder, see McKusick, Heritable Disorders of Connective Tissue. 4th ed., St. Louis, CV. Mosby Co., 1972). Likewise, ornithine transcarbamylase expression could be augmented to treat the disease caused by its deficiency. In another example, glucose-6-phosphate dehydrogenase expression could be augmented in erythrocyte precursors or hematopoietic precursors to allow expression in red blood cells in order to treat G6PD deficiency (favism, acute hemolytic anemnia).
10032) Treatments of some diseases require addition of a composition or the production of a circulating factor. One example is the production of alphal-antitrypsin in plasma to treat a deficiency that causes lung destruction, especially in tobacco smokers. Other examples of providing circulating factors are the production of hormones, growth factors, blood proteins, and homeostatic regulators.
100331 In another embodiment of the invention, differentiated ES cells obtained or grown as described herein are used to repair or supplement damaged or degenerating tissues or organs. This may require that the cells are first differentiated in vitro into lineage-restricted stem cells or terminally differentiated cells.
[0034] Before implantation or transplantation the ES cell obtained or grown as described herein can be genetically manipulated to reduce or remove cell-surface molecules responsible for transplantation rejection in order to generate universal donor cells. For example, the mouse Class I histocompatibility (MHC) genes can be disabled by targeted deletion or disruption of the beta- microglobulin gene (see, e.g., Zijlstra, Nature 342:435-438, 1989). This significantly improves renal function in mouse kidney allografts (see, e.g., Coffinan, J. Immunol. 151 :425-435, 1993) and allows indefinite survival of murine pancreatic islet allografts (see, e.g., Markmann, Transplantation 54:1085-1089, 1992). Deletion of the Class II MHC genes (see, e.g., Cosgrove, Cell 66:1051-1066, 1991) further improves the outcome of transplantation. The molecules TAPl and Ii direct the intercellular trafficking of MHC class I and class II molecules, respectively (see, e.g., Toume, Proc. Natl. Acad. Sci. USA 93: 1464-1469, 1996); removal of these two transporter molecules, or other MHC intracellular trafficking systems may also provide a means to reduce or eliminate transplantation rejection. As an alternative to a universal donor approach to histocompatibility, genetic manipulation could be used to generate "custom" MHC profiles to match individual needs.
[0035] In addition to manipulating MHC expression, for human transplantation, cells and tissues from ES cells and cell lines grown in accordance with the invention can also be manipulated to eliminate or reduce other cell-surface marker molecules that induce tissue/organ graft rejection. All such modifications that reduce or eliminate allogenic (e.g., organ graft) rejection when employing cells, cell lines (or any parts or derivatives thereof) derived from the cells of the present invention are embodied herein.
[0036] Tissue Engineering. The invention provides human cells and methods that can be used to produce or reconstruct a tissue or organ, including in vitro or vivo regeneration, and engineering of artificial organs or organoids. In one aspect, the ES cells grown in accordance with the invention are pre-cultured under conditions that promote generation of a desired differentiated, or restricted, cell lineage. The culture conditions can also be manipulated to generate a specific cell architecture, such as the three-dimensional cellular arrangements and relationships seen in specialized structures, such as neuromuscular junctions and neural synapses, or organs, such as livers, and the like. These conditions can include the use of bioreactor systems to influence the generation of the desired cell type. Bioreactor systems are commonly used in the art of tissue engineering to create artificial tissues and organs. Some bioreactor systems are designed to provide physiological stimuli similar to those found in the natural environments. Others are designed to provide a three-dimensional architecture to develop an organ culture. For example, the compositions (including bioreactors, scaffolds, culture devices, three-dimensional cell culture systems, and the like) and methods described in U.S. Pat. Nos. 6,143,293; 6,121,042; 6,110,487; 6,103,255; 6,080,581 ; 6,048,721; 6,022,743; 6,022,742; 6,008,049; 6,001,642; 5,989,913; 5,962,325; 5,858,721 ; 5,843,766; 5,792,603; 5,770,417; 5,763,279; 5,688,687; 5,612,188; 5,571,720; 5,770,417; 5,626,863; 5,523,228; 5,459,069; 5,449,617; 5,424,209; 5,416,022; 5,266,480; 5,223,428; 5,041,138; and 5,032,508; or variations thereof, can be used in conjunction with this invention.
10037] As discussed above, production of cells, tissues and organs for transplantation may require combinations of genetic modifications, in vitro differentiation, and defined substrate utilization of the cells of the invention to generate the desired altered cell phenotype and, if a tissue or organ is to be generated, the necessary three-dimensional architecture required for functionality. For example, a replacement organ may require vasculature to deliver nutrients, remove waste products, and deliver products, as well as specific cell-cell contacts. A diverse cell population will be required to carry out these and other specialized functions, such as the capacity to repopulate by lineage-restricted stem cells.
[0038| Further examples of the use of the ES cells obtained or grown in accordance with the invention and their differentiated derivatives include generation of non-cellular structures such as bone or cartilage replacements.
100391 Human ES cells obtained or grown in accordance with the invention can also be implanted into the central nervous system (CNS) for the treatment of disease or physical brain injury, such as ischemia or chemical injury; animal models can also be used to test the efficacy of this treatment, e.g., injection of compounds like 60HAD, or, fluid percussion injury can serve as a model for human brain injury. In these animal models, the efficacy of administration of stem cells of the invention is determined by the recovery of improvement of injury related deficits, e.g., motor or behavioral deficits. Human ES cells obtained in accordance with the invention can also be implanted into the central nervous system (CNS) for the treatment of amyotropic lateral sclerosis (ALS); animal models can also be used to test the efficacy of this treatment, e.g., the SODI mutant mouse model. Human ES cells of the invention can also be implanted into the central nervous system (CNS) for the treatment of Alzheimer's disease; one animal model that can be used to test the efficacy of this treatment is the mutant presenilin I mouse. Human ES cells can also be implanted into the central nervous system (CNS) for the treatment of Parkinson's disease, efficacy of this treatment can be assessed using, e.g., the MPTP mouse model.
100401 Human ES cells grown in accordance with the invention can also be used to treat diseases of cardiac, skeletal or smooth muscles; cells can be directly injected into or near desired sites. The survival and differential of these cells can be determined by monitoring the expression of appropriate markers, e.g, human muscle-specific gene products (see, e.g., Klug, 1996, supra; Soonpaa, Science 264:98-101, 1994; Klug, Am. J. Physiol. 269:H1913-H1921, 1995; implanting fetal cardiomyocytes and mouse ES-derived cells), for exemplary protocols. 10041) Human ES cells grown in accordance with the invention can also be used to treat diseases of the liver or pancreas. Cells can be directly injected into the hepatic duct or the associated vasculature. Similarly, cells could be delivered into the pancreas by direct implantation or by injection into the vasculature. Cells engraft into the liver or pancreatic parenchyma, taking on the functions normally associated with hepatocytes or pancreatic cells, respectively. As with other implantations, cell survival, differentiation and function can be monitored by, e.g., immunohistochemical staining, or PCR, of specific gene products.
10042] Human ES cells of the invention can also be used to treat diseases, injuries or other conditions in or related to the eyes. Cells can be directly injected into the retina, optic nerve or
other eye structure. In one aspect, cells differentiate into retinal epithelia, nerve cells or other related cell types. As with other engraftments, cell survival, differentiation and function can be monitored by, e.g., immunohistochemical staining, or PCR, of specific gene products. [0043] Human ES cells of the invention can also be used to treat vascular diseases or other related conditions by repopulation of the vasculature with, e.g., vascular endothelium, vascular smooth muscle and other related cell types. For example, an injured vein or artery is treated by implantation of ES cells of the invention; these cells re-populate the appropriate injured sites in the vasculature. The cells can be implanted/injected into the general circulation, by local ("regional") injection (e.g., into a specific organ) or by local injection, e.g., into a temporarily isolated region. In an alternative procedure, a reconstructed or a completely new vasculature can be constructed on a biomatrix or in an organotypic culture, as described herein. 10044] Human ES cells of the invention can also be used to repopulate bone marrow, e.g., in situations where bone marrow has been ablated, e.g., by irradiation for the treatment of certain cancers. Protocols for these treatments can be optimized using animal models, e.g., in animals whose endogenous bone marrow has been ablated. EBD cells of the invention can be injected into the circulatory system or directly into the marrow space of such an animal (e.g., a rodent model). Injection of the human cells of the invention would allow for the re-population of bone marrow, as well as engraftment of a wide range of tissues and organs. If the animals are sublethally irradiated, the efficacy of the cells can be monitored by tracking animal survival, as without bone marrow re-population the animal will die. The hematopoietic fate of the injected cells also can be examined by determining the type and amount to human cell colonies in the spleen.
10045] In another aspect, the human ES cells obtained or grown in accordance with the invention can be used in organotypic co-culture. This system offers the benefits of direct cell application and visualization found in in vitro methods with the complex and physiologically relevant milieu of an in vivo application. In one aspect, a section of tissue or an organ specimen is placed into a specialized culture environment that allows sufficient nutrient access and gas exchange to maintain cellular viability.
10046] In using the human ES cells, or differentiated derivatives thereof, of the invention to construct artificial organs or organoids, bioengineered matrices or lattice structures can be
populated by single or successive application of these human cells. The matrices can provide structural support and architectural cues for the repopulating cells.
10047] Biosensors and Methods of Screening. ES cells or cell lines obtained or grown in accordance with the invention and cells, tissues, structures and organs derived from them can be used for toxicological, mutagenic, and/or teratogenic in vitro tests and as biosensors. Thus, the invention provides engineered cells, tissues and organs for screening methods to replace animal models and form novel human cell-based tests. These systems are useful as extreme environment biosensors. ES cells or cell lines and cells, tissues, structures and organs derived from them can be used to build physiological biosensors; for example, they can be incorporated in known system, as described, e.g., in U.S. Pat. Nos. 6,130,037; 6,129,896; and 6,127,129. These sensors can be implanted bio-electronic devices that function as in vivo monitors of metabolism and other biological functions, or as an interface between human and computer. [00481 The invention also provides a method for identifying a compound that modulates an ES cell function in some way (e.g., modulates differentiation, cell proliferation, production of factors or other proteins, gene expression). The method includes: (a) incubating components comprising the compound and ES cell(s) grown under conditions described herein, sufficient to allow the components to interact; and (b) determining the effect of the compound on the ES cell(s) before and after incubating in the presence of the compound. Compounds that ES cell function include peptides, peptidomimetics, polypeptides, chemical compounds and biologic agents. Differentiation, gene expression, cell membrane permeability, proliferation and the like can be determined by methods commonly used in the art. The term "modulation" refers to inhibition, augmentation, or stimulation of a particular cell function.
[0049] ES Cells as Sources of Macromolecules. The ES cells and cell lines obtained or grown in accordance with the invention can also be used in the biosynthetic production of macromolecules. Non-limiting examples of products that could be produced are blood proteins, hormones, growth factors, cytokines, enzymes, receptors, binding proteins, signal transduction molecules, cell surface antigens, and structural molecules. Factors produced by undifferentiated, differentiating, or differentiated ES cells would closely simulate the subtle folding and secondary processing of native human factors produced in vivo. Biosynthetic production by ES cells and cell lines can also involve genetic manipulation followed by in vitro growth and/or
differentiation. Biosynthetic products can be secreted into the growth media or produced intracellularly or contained within the cell membrane, and harvested after cell disruption. Genetic modification of the gene coding for the macromolecule to be biosynthetically produced can be used to alter its characteristics in order to supplement or enhance functionality. In this way, novel enhanced-property macromolecules can be created and pharmaceuticals, diagnostics, or antibodies, used in manufacturing or processing, can be produced. Pharmaceutical, therapeutic, processing, manufacturing or compositional proteins that may be produced in this manner include, e.g., blood proteins (clotting factors VII and IX, complement factors or components, hemoglobins or other blood proteins and the like); hormones (insulin, growth hormone, thyroid hormone, gonadotrophins, PMSG trophic hormones, prolactin, oxytocin, dopamine, catecholamines and the like); growth factors (EGF, PDGF, NGF, IGF and the like); cytokines (interleukins, CSF, GMCSF, TNF, TGF.alpha., TGF.beta., and the like); enzymes (tissue plasminogen activator, streptokinase, cholesterol biosynthetic or degradative, digestive, steroidogenic, kinases, phosphodiesterases, methylases, de-methylases, dehydrogenases, cellulases, proteases, lipases, phospholipases, aromatase, cytochromes adenylate or guanylate cyclases and the like); hormone or other receptors (LDL, HDL, steroid, protein, peptide, lipid or prostaglandin and the like); binding proteins (steroid binding proteins, growth hormone or growth factor binding proteins and the like); immune system proteins (antibodies, SLA or MHC gene products); antigens (bacterial, parasitic, viral, allergens, and the like); translation or transcription factors, oncoproteins or proto-oncoproteins, milk proteins (caseins, lactalbumins, whey and the like); muscle proteins (myosin, tropomyosin, and the like).
10050] Screens for Culture Media Factors. In another embodiment and use of the invention, ES cells grown in accordance with the teachings herein are used to optimize the in vitro culture conditions for differentiating the cells. High-throughput screens can be established to assess the effects of media components, exogenous growth factors, and attachment substrates. These substrates include viable cell feeder layers, cell extracts, defined extracellular matrix components, substrates which promote three-dimensional growth such as methylcellulose and collagen, novel cell attachment molecules, and/or matrices with growth factors or other signaling molecules embedded within them. This last approach may provide the spatial organization
required for replication of complex organ architecture (as reviewed in Saltzman, Nature Medicine 4:272-273, 1998).
EXAMPLES
[005i| The following examples are intended to illustrate but not limit the invention. While they are typical of those that might be used, other procedures known to those skilled in the art may alternatively be used.
Example 1
10052] Frozen human umbilical cord blood mononuclear cells were received from Cambrex, thawed according to manufacturer's recommendation and placed into 3 T75 flasks with 12 ml each of USSC media (low glucose DMEM with Glutamax, Invitrogen 10567-014), 10'7 M dexamethasone (Sigma), 100 U/ml penicillin and 0.1 mg/ml streptomycin. Media was changed after 48 hrs then every 2-3 days following. On day 14, proliferating cells were passaged 1 :3 into new flasks by using 0.25% trypsin/EDTA and neutralized by trypsin neutralization solution. Every 5 to 7 days cells were similarly passaged. Aliquots of these umbilical cord stem cells (herein abbreviated "UCSC") were cryopreserved at several passages.
[0053] The phenotype of passage 5 UCSC was CD31 (2%), CD34 (0%), CD44 (97%), CD50 (0%), CD71 (47%), CD90, (96%), CD 106 (0%).
[0054] Passage 6 UCSC were plated onto a collagen I + Gelatin coated 6-well plate. Each well contained between 0.2 to 1 million cells. Cells were irradiated at 3500 RAD. HuES-2 (Harvard line, Passage 27) cells were plated into the coated wells and the media was changed to HuES media (Cowan, CA. et. al, 2004). Typical hES colonies were observed at all UCSC densities, so 0.25 million cells per well was chosen for all future work. hES cells were passaged every 3-5 days using 0.05 trypsin/EDTA. HuES-2 was at passage 38 on (11 passages) at the time of this writing.
[0055| After the first few passages, it was observed that huES-2 cells grew substantially faster on the cells than on mouse embryo fibroblasts (MEF). HuES-2 formed very large colonies on UCSC (up to 2000 microns), where cells in parallel growing on MEF were no more than 500 microns. It was also observed that huES-2 cells did not spontaneously differentiate at the colony margins or middle, as is observed with large colonies growing on MEF.
[0056] It was also observed that following incubation in trypsin, large HuES-2 cell colonies disaggregated readily into uniform small multicellular colonies and easily lifted off from the UCSC feeder layer. This was unique to the cells growing on UCSC, and cells growing on MEF were much more difficult to remove from the feeder layer and trypsin digestion resulted in generating more single cells and small cell clumps.
Example 2
[0057| HuES-2 were observed growing on Matrigel in the presence of UCSC conditioned media. This conditioned media was prepared by plating UCSC at 1 million cells per 10cm plate into 12 mis of HuES media. After 24 hrs media was harvested and sterile filtered. Prior to use on huES-2 cells, 8ng/ml FGF2 was added to the conditioned media. The initial observation is that UCSC conditioned media can support the growth of HuES-e cells growth on Matrigel, but at a reduced cell proliferation rate. This is commonly observed when adapting cells to new environments. Importantly, HuES-2 cells grown in the presence of UCSC conditioned media had reduced spontaneous differentiation as compared to MEF conditioned media, to the point that there were no observable differentiated cells.
Amit M, Margulets V, Segev H, Shariki K, Laevsky I, Coleman R and Itskovitz-EldorJ. 2003.
Human feeder layers for human embryonic stem cells. Biology of Reproduction. 68, 2150-2156.
Koglar G, Sensken S, Airey JA, Trapp T, Muschen M, Feldhahn N, et al. 2004. A new human somatic stem cell from placental cord blood with intrinsic pluripotent differentiation potential. J.
Exp. Med. 200, 123-135.
Richards M, Fong CY, Chan WK, Wong PC and Bongso A. 2002. Human feeders support prolonged undifferentiated growth of human inner cell masses and embryonic stem cells. Nature
Biotechnology. 20, 933-936.
Richards M, Tan S, Fong CY, Biswas A, Chan WK and Bongso A. 2003. Comparative evaluation of various human feeders for prolonged undifferentiated growth of human embryonic stem cells. Stem Cells. 21 , 546-556.
Stojkovic P, Lako M, Stewart R, Przyborski S, Armstrong L, Evans J, Murdoch A, Strachan T and Stojkovic M. 2005. An autogeneic feeder cell system that efficiently supports growth of undifferentiated human embryonic stem cells. Stem Cells. 23, 306-314.
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282, 1145-1147.
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England Journal of Medicine. 350; 13. (2004).
loose] While certain features of the invention have been illustrated and described herein, many modifications, substitutions, changes, and equivalents will now occur to those of ordinary skill in the art. It is, therefore, to be understood that the appended claims are intended to cover all such modifications and changes as fall within the true spirit of the invention.
Claims
1. A method for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof comprising growing the human embryonic stem (ES) cells in a culture medium comprising a feeder layer of umbilical cord blood stem cells, medium comprising secreted proteins from umbilical cord stem cells, or the combination thereof.
2. The method of claim 1 wherein the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
3. The method of claim 2 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CDΘO1™
4. The method of claim 1 wherein the feeder layer of umbilical cord stem cells are treated to halt cell division.
5. The method of claim 1 further comprising a substrate.
6. The method of claim 5 wherein the substrate is collagen I, collagen IV, fϊbronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
8. The method of claim 6 wherein the collagen I is human type 1 collagen.
9. The method of claim 5 wherein the substrate comprises a synthetic or biosynthetic cell adhesion molecule or a mixture thereof.
10. The method of claim 1 further comprising an extracellular matrix.
11. The method of claim 10 wherein the extracellular matrix is obtained from human embryonic germ cell derivatives, human umbilical cord blood stem cells, human mesenchymal stem cells, or human fibroblasts.
12. The method of claim 11 wherein the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
13. The method of claim 12 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos.
14. The method of claim 10 wherein the extracellular matrix is EHS mouse sarcoma basement membrane.
15. A composition for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof comprising a feeder layer of human umbilical cord blood stem cells, secreted proteins from human umbilical cord blood stem cells, or the combination thereof.
16. The composition of claim 15 wherein the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
17. The composition of claim 16 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44p0S and CD90pos.
18. The composition of claim 15 wherein the umbilical cord blood stem cells are treated to halt cell division.
19. The composition of claim 15 further comprising a substrate.
20. The composition of claim 19 wherein the substrate is collagen I, collagen IV, fibronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
21. The composition of claim 20 wherein the collagen I is human type I collagen.
22. The composition of claim 19 wherein the substrate comprises a synthetic or biosynthetic cell adhesion molecule or a mixture thereof.
23. The composition of claim 19 wherein the substrate is extracellular matrix.
24. The composition of claim 23 wherein the extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord stem cells or human fibroblasts.
25. The composition of claim 24 wherein the human umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
26. The composition of claim 25 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos.
27. The composition of claim 23 wherein the extracellular matrix is EHS mouse sarcoma basement membrane.
28. A kit for cultivating human embryonic stem (ES) cells and maintaining the pluripotency thereof, the kit comprising a first container of secreted proteins from human umbilical cord stem cells, a second container of substrate, and instructions for the use thereof.
29. The kit of claim 28 wherein said human umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
30. The kit of claim 29 wherein said adherent, CD45neg, HLA class IInee stem cells are CD34neg, CD106neg, CD44pos and CD90pos.
31. The kit of claim 28 wherein the substrate is collagen I, collagen IV, fibronectin,
superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
32. The kit of claim 31 wherein the collagen I is human type I collagen.
33. The kit of claim 28 wherein the substrate comprises a synthetic or biosynthetic cell adhesion molecule or a mixture thereof.
34. The kit of claim 28 wherein the substrate is extracellular matrix.
35. The kit of claim 34 wherein the extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts.
36. The kit of claim 35 wherein the human umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
37. The kit of claim 36 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos.
38. The kit of claim 34 wherein the extracellular matrix is EHS mouse sarcoma basement membrane.
39. A composition comprising pluripotent human embryonic stem (ES) cells and secreted proteins from human umbilical cord blood stem cells, in combination with a substrate.
40. The composition of claim 39 wherein the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
41. The composition of claim 40 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos.
42. The composition of claim 39 wherein the substrate is collagen I, collagen IV, fibronectin, superfϊbronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
43. The composition of claim 42 wherein the collagen I is human type 1 collagen.
44. The composition of claim 39 wherein the substrate comprises a synthetic or biosynthetic cell adhesion molecule or a mixture thereof.
45. The composition of claim 39 wherein the substrate is extracellular matrix.
46. The composition of claim 45 wherein the extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts.
47. The composition of claim 46 wherein the human umbilical cord blood stem cells are
adherent, CD45neg, HLA class IIneg stem cells.
48. The composition of claim 47 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44p0S and CD90pos.
49. The composition of claim 45 wherein the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix.
50. A composition comprising pluripotent human embryonic stem (ES) cells and human umbilical cord blood stem cells.
51. The composition of claim 50 wherein the umbilical cord blood stem cells are adherent, CD45neg, HLA class IIneg stem cells.
52. The composition of claim 40 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44p0S and CD90pos.
53. The composition of claim 50 wherein the human umbilical cord stem cells are treated to halt cell division.
54. The composition of claim 50 further comprising a substrate.
55. The composition of claim 54 wherein the substrate is collagen I, collagen IV, fϊbronectin, superfibronectin, laminin, heparan sulfate proteoglycan, entactin, or any combination thereof.
56. The composition of claim 55 wherein the collagen I is human type 1 collagen.
57. The composition of claim 50 wherein the substrate comprises a synthetic or biosynthetic cell adhesion molecule or a mixture thereof.
58. The composition of claim 54 wherein the substrate is extracellular matrix.
59. The composition of claim 58 wherein the extracellular matrix is obtained from human embryonic germ cell derivatives, human mesenchymal stem cells, human umbilical cord blood stem cells or human fibroblasts.
60. The composition of claim 59 wherein the human umbilical cord blood stem cells are adherent, CD45neg, HLA class If eg stem cells.
61. The composition of claim 60 wherein said adherent, CD45neg, HLA class IIneg stem cells are CD34neg, CD106neg, CD44pos and CD90pos.
62. The composition of claim 58 wherein the extracellular matrix is EHS mouse sarcoma basement membrane or human extracellular matrix.
63. Cultured pluripotent human embryonic stem (ES) cells obtained by the process of 1)
providing a culture medium comprising a composition of claim 15 2) introducing human embryonic stem cells thereto; and 3) growing the human embryonic stem cells therein to produce cultured pluripotent human embryonic stem cells. 64. A method for obtaining a pluripotent human embryonic cell line comprising the steps of
1 ) isolating cells from the inner cell mass of a pre-implantation embryo,
2) introducing the cells of (1) into a culture medium comprising the composition of claim 15,
3) growing the human embryonic stem cells over several passages in the culture medium, thereby obtaining a human embryonic cell line derived from the pre-implantation embryo.
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