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WO2008028044A9 - Markers and methods for assessing and treating ulcerative colitis and related disorders using 66 gene panel - Google Patents

Markers and methods for assessing and treating ulcerative colitis and related disorders using 66 gene panel Download PDF

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Publication number
WO2008028044A9
WO2008028044A9 PCT/US2007/077247 US2007077247W WO2008028044A9 WO 2008028044 A9 WO2008028044 A9 WO 2008028044A9 US 2007077247 W US2007077247 W US 2007077247W WO 2008028044 A9 WO2008028044 A9 WO 2008028044A9
Authority
WO
WIPO (PCT)
Prior art keywords
assessing
markers
methods
ulcerative colitis
related disorders
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/US2007/077247
Other languages
French (fr)
Other versions
WO2008028044A2 (en
Inventor
Xilin Li
Xiao-Yu Song
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Janssen Biotech Inc
Original Assignee
Centocor Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Centocor Inc filed Critical Centocor Inc
Publication of WO2008028044A2 publication Critical patent/WO2008028044A2/en
Anticipated expiration legal-status Critical
Publication of WO2008028044A9 publication Critical patent/WO2008028044A9/en
Ceased legal-status Critical Current

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/106Pharmacogenomics, i.e. genetic variability in individual responses to drugs and drug metabolism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/136Screening for pharmacological compounds
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Pathology (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
PCT/US2007/077247 2006-08-30 2007-08-30 Markers and methods for assessing and treating ulcerative colitis and related disorders using 66 gene panel Ceased WO2008028044A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US82398306P 2006-08-30 2006-08-30
US60/823,983 2006-08-30

Publications (2)

Publication Number Publication Date
WO2008028044A2 WO2008028044A2 (en) 2008-03-06
WO2008028044A9 true WO2008028044A9 (en) 2009-04-23

Family

ID=39136888

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2007/077247 Ceased WO2008028044A2 (en) 2006-08-30 2007-08-30 Markers and methods for assessing and treating ulcerative colitis and related disorders using 66 gene panel

Country Status (2)

Country Link
US (1) US7943310B2 (en)
WO (1) WO2008028044A2 (en)

Families Citing this family (19)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
FR2866726B1 (en) * 2004-02-23 2006-05-26 Jazzmutant CONTROLLER BY HANDLING VIRTUAL OBJECTS ON A MULTI-CONTACT TOUCH SCREEN
US20080293582A1 (en) * 2006-08-30 2008-11-27 Xilin Li Markers and Methods for Assessing and Treating Ulcerative Colitis and Related Disorders Using a 43 Gene Panel
WO2008028044A2 (en) 2006-08-30 2008-03-06 Centocor, Inc. Markers and methods for assessing and treating ulcerative colitis and related disorders using 66 gene panel
EP2165194A4 (en) * 2007-05-31 2010-09-08 Abbott Lab BIOMARKERS PREDICTIVE OF THE RESPONSIVENESS TO TNF-alpha INHIBITORS IN AUTOIMMUNE DISORDERS
WO2009117791A2 (en) 2008-03-28 2009-10-01 Katholieke Universiteit Leuven Mucosal gene signatures
EP2326731B1 (en) * 2008-08-25 2013-11-13 Janssen Biotech, Inc. Biomarkers for anti-tnf treatment in ulcerative colitis and related disorders
BRPI0917379A2 (en) * 2008-08-29 2015-11-17 Centocor Ortho Biotech Inc markers and methods for assessing and treating ulcerative colitis and related disorders using a 20 gene panel
NZ610075A (en) 2010-11-08 2015-03-27 Novartis Ag Cxcr2 binding polypeptides
US20130218581A1 (en) * 2011-04-26 2013-08-22 Selventa, Inc. Stratifying patient populations through characterization of disease-driving signaling
US9328174B2 (en) 2012-05-09 2016-05-03 Novartis Ag Chemokine receptor binding polypeptides
EP2716768A1 (en) * 2012-10-04 2014-04-09 IN. Medica, d.o.o. Cell-based assay for assessing TNF alpha inhibitors
US10822406B2 (en) 2015-01-29 2020-11-03 Oxford University Innovation Limited Method for treating chronic intestinal inflammation and inflammatory bowel disease by administering antagonists of Oncostatin-M (OSM) and/or antagonists of OSM receptor-beta (OSMR)
CN108290058B (en) 2015-09-17 2023-05-16 美国安进公司 Predicting clinical response of IL23 antagonists using IL23 pathway biomarkers
CA3116005A1 (en) * 2018-10-19 2020-04-23 Children's Hospital Medical Center Use of mucosal transcriptomes for assessing severity of ulcerative colitis and responsiveness to treatment
EA202191354A1 (en) * 2018-11-15 2021-08-11 Янссен Байотек, Инк. METHODS AND COMPOSITIONS FOR PREDICTION OF RESPONSE TO INFLAMMATORY INTESTINAL DISEASE THERAPY
EP3884276A2 (en) * 2018-11-23 2021-09-29 Katholieke Universiteit Leuven Predicting a treatment response in inflammatory bowel disease
US11779643B2 (en) * 2019-08-28 2023-10-10 Children's Hospital Medical Center Methods and compositions for the treatment of an inflammatory bowel disease
EP4305425A2 (en) * 2021-03-12 2024-01-17 Janssen Biotech, Inc. Methods for predicting treatment response in ulcerative colitis
WO2025085674A1 (en) * 2023-10-20 2025-04-24 Bacainn Therapeutics, Inc. Methods and compositions for the treatment of ulcerative colitis

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5328470A (en) 1989-03-31 1994-07-12 The Regents Of The University Of Michigan Treatment of diseases by site-specific instillation of cells or site-specific transformation of cells and kits therefor
ATE205542T1 (en) 1992-03-04 2001-09-15 Univ California COMPARATIVE GENOME HYBRIDIZATION
ATE424927T1 (en) 1993-10-28 2009-03-15 Houston Advanced Res Ct MICROFABRICATED POROUS FLOW DEVICE FOR DISCRETE DETERMINATION OF BONDING REACTIONS
US20050123938A1 (en) * 1999-01-06 2005-06-09 Chondrogene Limited Method for the detection of osteoarthritis related gene transcripts in blood
AU2001255518A1 (en) 2000-06-07 2001-12-17 Baylor College Of Medicine Compositions and methods for array-based nucleic acid hybridization
EP1545608A4 (en) 2002-06-28 2006-09-13 Centocor Inc Mammalian ch1 deleted mimetibodies, compositions, methods and uses
US20060134663A1 (en) 2004-11-03 2006-06-22 Paul Harkin Transcriptome microarray technology and methods of using the same
US20080293582A1 (en) * 2006-08-30 2008-11-27 Xilin Li Markers and Methods for Assessing and Treating Ulcerative Colitis and Related Disorders Using a 43 Gene Panel
WO2008028044A2 (en) 2006-08-30 2008-03-06 Centocor, Inc. Markers and methods for assessing and treating ulcerative colitis and related disorders using 66 gene panel
BRPI0917379A2 (en) 2008-08-29 2015-11-17 Centocor Ortho Biotech Inc markers and methods for assessing and treating ulcerative colitis and related disorders using a 20 gene panel

Also Published As

Publication number Publication date
US20090054253A1 (en) 2009-02-26
US7943310B2 (en) 2011-05-17
WO2008028044A2 (en) 2008-03-06

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