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WO2007104565A1 - Système - Google Patents

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Publication number
WO2007104565A1
WO2007104565A1 PCT/EP2007/002292 EP2007002292W WO2007104565A1 WO 2007104565 A1 WO2007104565 A1 WO 2007104565A1 EP 2007002292 W EP2007002292 W EP 2007002292W WO 2007104565 A1 WO2007104565 A1 WO 2007104565A1
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WO
WIPO (PCT)
Prior art keywords
passage
substrate
electrode
domain
cell
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/EP2007/002292
Other languages
English (en)
Inventor
Simon Pedersen
Tautgirdas Ruzgas
Christer Spegel
Rafael Taboryski
Ras Kaas Vestergaard
Anders Wolf
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Sophion Bioscience AS
Original Assignee
Sophion Bioscience AS
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Sophion Bioscience AS filed Critical Sophion Bioscience AS
Publication of WO2007104565A1 publication Critical patent/WO2007104565A1/fr
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/483—Physical analysis of biological material
    • G01N33/487—Physical analysis of biological material of liquid biological material
    • G01N33/48707—Physical analysis of biological material of liquid biological material by electrical means
    • G01N33/48728—Investigating individual cells, e.g. by patch clamp, voltage clamp
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/26—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
    • G01N27/403—Cells and electrode assemblies
    • G01N27/4035—Combination of a single ion-sensing electrode and a single reference electrode
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/483—Physical analysis of biological material
    • G01N33/487—Physical analysis of biological material of liquid biological material
    • G01N33/48707—Physical analysis of biological material of liquid biological material by electrical means

Definitions

  • This invention relates to a system for determining and/or monitoring properties in a single particle, and particularly to a system for determining and/or monitoring properties in a single biological cell.
  • a typical example of the advantages gained from single cell analysis is regular blood testing, where thousands of cells are homogenized to provide sufficient amounts of analytes for quantification. At early stages of e.g. carcinogenesis, it is possible that only a few cells might carry the specific marker for the disease. These cells may therefore be masked by the complex sample matrix. If cells are examined individually, the chance of recognizing abnormalities is much higher.
  • Single cell analysis can also be utilized for testing and/or screening of pharmaceutical agents and toxins, increasing the throughput compared to classical multi cellular assays.
  • the development phase of new drugs is highly associated with expensive and ethically controversial animal experiments.
  • Single cell screening systems and methods can, in the future, to at least some extent replace animal experiments.
  • Huang and Rubinsky have developed a flow through micro-electroporation chip for single cell electroporation [Y. Huang and B. Rubinslcy, Sensors and Actuators A, 2003, 104 (3), 205-212].
  • the cells are captured on a micro-hole by a pressure difference and can then be individually electroporated.
  • the system is not constructed to perform electrochemical studies on the captured cell.
  • WO 02/29402 Sophion Bioscience AJS discloses an apparatus for a high throughput system for determining and/or monitoring electrophysiological properties of ion channels of ion channel-containing membranes.
  • the substrate contains no electrodes for amperometry, dielectric spectroscopy, electrorotation, electroporation, etc., thus, measurements are limited to those of ion-channels and ion-channel containing membranes.
  • US 6,315,940 Bl, Nisch et al. discloses a microelement device composed from microelectrodes adapted for making contact to cells.
  • the cells are directed onto the cells by hydrodynamic force or negative pressure. The method is thus limited to those where the electrodes are in contact with the cells and measurements of potentials associated with the whole cell. i.e. not electrochemical potentials and currents.
  • WO 2001005511 Lock and Pething, discloses a system composed of electrodes for the study of AC electrokinetic Dielectrophoresis (DEP, travelling wave dielectrophoresis (TWD) or electrorotation.
  • DEP AC electrokinetic Dielectrophoresis
  • TWD travelling wave dielectrophoresis
  • the system does not, however, contain any feature for single particle positioning.
  • WO 9316383 discloses a method for the detection of various substances upon their interaction with surface modified particles. There is no feature concerning the positioning of the particle, described in the application.
  • Haas et al. discloses an electroporation method composed of a container. The container is placed in close proximity to the cell, thus, no method for the precise positioning of the cell exists.
  • WO 9924110 discloses a method for the permeabilization of single cells utilizing individually controlled microelectrodes. However, no system for the industrially feasible positioning of the single cell is described.
  • a system for determining and/or monitoring properties in a single particle comprising an assembly comprising a front side structure, a rear side structure and a substrate, the substrate comprising: a first upper surface part and a first lower surface part for holding the single particles, a first site comprising a passage in the substrate, a first end of the passage being in contact with a first domain at the first upper surface part of the substrate and a second end of the passage being in contact with a second domain at the first lower surface of the substrate, the first end of the passage defining an aperture adapted to receive the single particle; at least one electrode positioned on the first upper surface part of the substrate; a reference electrode in electrical contact with the first domain; at least one working electrode, situated on a surface of the substrate, and in electrical contact with the first domain; the first end of the passage being adapted to locate the single particle held at the first site, the particle thereby separating the first domain from the second domain; the at least one electrode on the first upper surface part
  • the at least one electrode on the first upper surface part is less than 100 ⁇ m from the first end of the passage.
  • the at least one electrode on the first upper surface part is less than 100 ⁇ m from the first end of the passage.
  • the at least one electrode on the first upper surface part is less than 10 ⁇ m from the first end of the passage.
  • the particle is any object with dimensions within the range 0.5 to 500 ⁇ m. More preferably the particle comprises a lipid containing vesicle such as a biological cell.
  • the interface comprises an electrical contact for forming an ⁇ electrical connection between the system and the analysing system.
  • the assembly comprises a contact receiving portion
  • the electrical contact comprises a contact portion that is positioned within the contact receiving portion, extends from the system, and is m electrical contact with the working electrode.
  • the system comprises a plurality of analysing systems.
  • the system allows the measurement of properties such electrochemical and electrical properties, of an object such as a biological cell to be carried out, and then to be analysed using one or more different analysing systems.
  • the one or more different analysing systems can conveniently interface with the system through the at least one interface which allows the one or more analysing systems to interface with the substrate on which the particle is located. Any number of different types of analyse may be carried out on the particle once it has been accurately positioned in the system according to the present invention.
  • Some of the various analytical methods that can be used on a particle positioned on a system according to the present invention are set out below. All the methods fall within the general definition of electro-chemical methods. Electrochemistry is the study of electronic and electrical aspects of chemical reactions.
  • the system according to the present invention allows the measurement of properties of a cell by means of electro-chemical methods, which differ from patch clamping techniques in relation to the measurement of the ion content of a cell.
  • patch clamping techniques the ion content of a cell is measured through the membrane whereas with electro-chemical methods, electronic and electrical properties of a cell are determined by analysing chemical excretion from the cell.
  • Cyclic voltammetry has been investigated as a tool for the characterization of secretory events from single biological cells, e.g. Wightman et al. utilized fast scan CV (FSCV) to distinguish between adrenaline and noradrenaline at the single cell level [D. J. Michael and R. M. Wightman. Journal of Pharmaceutical and Biomedical Analysis, 19 (1-2), 1999, 33-46].
  • FSCV fast scan CV
  • E is the determined potential, which is related to the standard potential.
  • E 0 of the redox couple and the concentration of the oxidized species, Co, and the reduced species, C R .
  • R is the gas constant, 8.31441 J mol "1 K '1
  • T is the temperature in Kelvin
  • n is the number of electrons participating in the studied reaction
  • F is the faraday constant, 9.64846 x 10 4 C/equivalent.
  • An electrochemical biosensor is a self-contained integrated device which is capable of providing specific quantitative or semi-quantitative analytical information using a biological recognition element (biochemical receptor) which is retained m direct spatial contact with an electiochemical transduction element [D R Thevenot et al Electiochemical Biosensors Recommended Definitions and Classification (Technical Report) Pure and Applied Chemistry, 1999, 71 (12), 2333-2348]
  • the biological recognition element is m most cases, an enzyme, but can also be a whole living cell or a part of a cell i e macromolecules piesent in their original biological environment, isolated maciomolecul ⁇ s or engineered macromolecules
  • Enzyme based biosensors are classified into the 1st 2nd and 3rd generations
  • the function of biosensors of the 1st generation is based on detection of either the consumption of a cosubstiate (e g oxygen) [S J Updike et al . Nature, 1967, 214 (92).
  • N ⁇ va et al discloses an online biosensoi foi single cell studies
  • the sensoi system compiises a sampling capillary, positioned near a single cell and a pump to d ⁇ hvei solution captured neai the cell, to a flow cell biosensoi
  • the sampling capillary is positioned neai a single cell, piesent in a cell culture, hence. no method for single cell capturing is presented Also, dynamic measmements on the single cell are not possible, due to the distance between the cell and the sensing element
  • Capacitive biosensors can be formed by immobilizing recognition elements on an electiode When an analyte binds to the recognition element, oi in some way changes the characte ⁇ stics of the recognition element, changes in the dielectric properties of the sensing laj'er are detected.
  • One common application of capacitive biosensors is the detection and quantification of heavy metals, which, when they bind to an immobilized protein, change three dimensional conformation of the protein, causing a change m capacitance
  • Dielectric properties relate to the ability of materials to polarise under the influence of an electromagnetic field. The degree to which the material is polarized depends on the structure and molecular properties. Dielectric measurements can thus provide information of these characteristics. Dielectric properties are determined utilizing a technique known as dielectric spectroscopy
  • Dielectric measurements are based on the application of an AC current or voltage to a sample of material, and the measurement of the amplitude and phase shift of the resulting voltage or current. Impedance and admittance can then be calculated from the ratio of the current to the voltage and the ratio of the voltage to the current, respectively. From the impedance and the admittance, various parameters can be calculated, characterizing the studied material, e.g. permittivity, susceptibility, resistivity and conductivity.
  • Electrorotation is a type of dielectric spectroscopy that can be utilized for particle characterization, based on the electnc polanzability of the particles.
  • a non-uniform field can induce a torque on a particle, causing it to rotate.
  • This principle was utilized for the induction of cellular spin was in 19S2 [W. M. Arnold and U. Zimmerman, Z. Naturforsch, 1982 ; 37c, 908-915] and [M. Mischel et al., J. Biol. Phys. 19S2 ; 10, 223-226].
  • a generated electrical field giving a 90° phase difference between adjacent electrodes, causes a particle to rotate. The particle can rotate with or against the rotating current, depending on the properties of the particle.
  • Electrorotation can be used to study dynamic changes in the dielectric properties and the morphology of small objects, e.g. cells, since it provides a sensitive method for monitoring the physiological state of cells and determining their sensitivity to exposure to chemicals and other agents.
  • Electrorotation can also be utilized as a method for quantification of selected analytes.
  • receptor-modified particles will change their electrorotation properties upon interaction with a target substance.
  • Examples of interaction that can be studied are; antibody-antigen interaction, covalent and non- covalent interactions, adsorption interactions, absorption interactions, surface- active interactions, etc.
  • Electroporation is a process in which a current pulse is passed through a cell. The process results in the formation of pores in the membrane of the cell, making it possible for extracellular, water soluble, compounds to enter the cytosolic compartment of the cell. Electroporation is very important in biotechnology and medicine, where it is important to have the tools for the introduction of. membrane impermeable compounds, into living cells.
  • GFP green fluorescence protein
  • Electrophysiological methods can detect changes in the surface area of the cell and. electrochemical methods can reveal the amplitude and time resolution of the secretory events.
  • a substrate is provided on which a single particle can be accurately located.
  • the invention also allows for the substrate on which the particle is positioned to interface with one or more analysing systems in order that the single particle can be accurately analysed.
  • the present invention is adapted to all types of amperometric recordings, that is methods in which the current is proportional to the concentration of the species generating the current.
  • the first domain comprises a first canal and the second domain comprises a second canal.
  • the first canal has a first input and a first output
  • the second canal has a second input and second output
  • the first and second canals may be formed integrally with the substrate, or may be formed as separate structures. If the canals are formed as separate structures the ⁇ ' are then interfaced with the substrate.
  • a top section of the canals preferably comprises a transparent or semi-transparent material.
  • the transparent or semi-transparent material allows for visual inspection of the positioning of the panicle on the substrate. It also allows for visual inspection of the interfacing of the substrate with optical manipulation, observation and analytical tools such as microscopes and photosensitive detectors.
  • the locating means comprises pressure means for applying a pressure gradient along the passage such that the pressure at the first end of the passage is greater than the pressure at the second end of the passage.
  • a particle is thus positioned accurately at the aperture using hydrodynamic forces.
  • the locating means comprises a pump which pump is connectable to the second canal.
  • the system further comprises a detector for detecting when the single particle is positioned at the aperture.
  • the detector may comprises a transparent part formed in the front side structure positioned above the substrate.
  • the transparent part allows visual inspection and monitoring of the positioning of the single particle.
  • the detector comprises a system for measuring electrical resistance through the passage. This is achieved by applying a potential difference across the substrate passage, and simultaneously monitoring the current flow through the passage.
  • the at least one electrode on the first upper surface part of the substrate may be either a conducting electrode or a semi-conducting electrode.
  • conducting or semiconducting electrodes for single particle characterization on a substrate comprising means for single particle positioning
  • several analytical techniques can be employed, among others; classical electrochemical methods such as (i) amperometry and (ii) potentiometry. as well as methods based on modified electrodes such as (iii) biosensors.
  • methods for the determination of electrical properties of particles such as (iv) dielectric spectroscopy and (v) electrorotation are possible on the proposed substrate.
  • Manipulative/analytical techniques such as (vi) electroporation and electrophysiological techniques such as (vii) patch clamp are also possible.
  • the platform can easily be interfaced with external analytical tools such as (viii) microscopes.
  • Figure 1 is cross sectional representation of a first embodiment of a system according to the present invention
  • Figures 2A to 2J are schematic representations of embodiments of substrates suitable for inclusion in the system of Figure 1 ;
  • Figures 3A to 3C are schematic representations of reference electrode configurations suitable for forming part of the system of Figure 1;
  • Figures 4A to 4F are optical images of various configurations of working electrode suitable for forming part of the system of Figure 1 ;
  • Figure 5 is a schematic representation showing the system of Figure 1 connected to analysis systems;
  • Figure 6A is an optical image of a single HEK cell positioned on the an electrode configuration presented in Figure 4C.
  • Figure 6B is a graphical representation of the electrode configuration in Figure 6A.
  • Figure 6C is a graphical representation showing the increase in resistance over a front to back passage when the single HEK cell is positioned over an aperture forming part of the system of Figure 1 ;
  • Figures 7 A and 7B are graphical representations showing an amp ⁇ rometric set up forming part of a two and three electrode configuration respectively forming part of the system of Figure 1 ;
  • Figure 8A is a graphical representation of an amperometric response curved for ferricyanide, obtained using the electrode configuration of Figure SB;
  • Figure SB is an optical image of the working electrode configuration utilized for the experiments presented in Figure SA.
  • Figure 9A is a graphical representation of a cyclic voltammogram for pure buffer and 10 niM ferricynanide. obtained using the electrode configuration shown in Figure 9B;
  • Figure 9B is an optical image of the working electrode configuration utilized for the experiments presented in Figure 9A.
  • Figure 1 OA is a graphical representation of a cyclic voltammogram for the hexacyanoferrate complex prussian blue immobilised on the electrode configuration shown in Figure 1OB;
  • Figure 1OB is an optical image ot the working electrode configuration utilized for the experiments presented in 1 OA.
  • Figure 11 is a schematic representation illustrating the principle of amperometric analysis of exocytosis from a single cell using the system of Figure 1 ;
  • Figures 12A to 12C are schematic representations illustrating three different types of electrochemical communication within living cells
  • Figure 13 is a schematic representation illustrating the functionality of capacitive biosensor
  • Figure 14 is a schematic representation showing the principle of dielectric measurements
  • Figure 15A is a schematic representation showing the principle of electrorotation.
  • Figure 15B is an optical image of an electrode configuration suitable for electrorotation experiments.
  • a system for detemiining and/or monitoring properties in a single particle is illustrated schematically and is designated generally by the reference numeral 2.
  • the system comprises an assembly 4. which assembly comprises a substrate 6.
  • the assembly further comprises a front side structure 8 and a rear side structure 10 which together sandwich the substrate 6 and hold the substrate in place.
  • the front side structure 8 can be produced from any material.
  • the front side structure 8 comprises a portion 12 which is positioned over the substrate 6 which portion 12 is formed from a transparent or translucent material.
  • the transparency or translucency of portion 12 facilitates the interfacing of the system 2 with optical analysis systems.
  • the rear side structure 10 may be constructed from any material, preferably plastic, glass or metal.
  • the assembly further comprises canal 14 associated with the front side structure 8, and canal 16 associated with the rear side structure 10.
  • the canals 14. 16 aiiow liquid to be introduced into the system 2.
  • the system 2 further comprises a passage 28 extending between a first domain and a second domain, the canals 14. 16 defining the first domain and second domain respectively.
  • the passage 28 comprises a front side 30 and a back side 32 in contact with the first domain 14 and the second domain 16 respectively.
  • the passage 28 forms an aperture 34 on a front side of the substrate which allows for the positioning of a single particle.
  • the passage 28 can he formed using an isotropic and/or anisotropic etching technique.
  • the system 2 further comprises a first reference electrode 18 associated with the front side structure 8, and a second reference electrode 20 associated with the rear side structure 10.
  • the first and second reference electrodes 18,20 are positioned inside the front and rear side structures 8,10 respectively.
  • the first and second electrodes may however be placed at different locations relative to the front side structure 8 and the rear side structure 10.
  • a first reference electrode 18' and a second reference electrode 20' may be positioned proximate the entrance of the respective canals 14.16.
  • a first reference electrode 18" and a second reference electrode 20" may be placed directly on the front and backside 30.32 of the substrate 6 respectively.
  • the system 2 further comprises working electrodes 54 and electrical connections 22 positioned on the substrate 6. If the system 2 is operated in a three-electrode setup, the system 2 further comprises counter electrodes positioned on the substrate 6.
  • the working electrodes 54 are positioned close to the passage 28, preferably less than 1 mm from the passage 28. Moreover, the working electrodes 54 are manufactured from a material suitable for electrical and electrochemical measurements on a positioned particle.
  • Electrodes 54 Electrical and electrochemical measurements in respect of a positioned particle take place between two of the electrodes on the front side structure of the system, one of which is a working electrode 54.
  • connection part of the substrate 6 is composed of a material enabling connection of the substrate 6 to an external measurement equipment.
  • the substrate 6 further comprises an insulating polymer layer 24 formed from, for example, photoresist, silicon oxide or silicon nitride.
  • the electrical connections 22 provide a connection between a substrate 6 and the external environment, and are composed of any conductive material preferably a metal.
  • the electrical connectors 22 further comprise a probe 26 preferably a spring probe or other electrical low-resistance connector. Due to the configuration of the system 2. ⁇ is only possible for electric current to flow through the passage 28 from the front side 30 of the passage 28 to the back side 32 of the passage.
  • the system 2 could use commercially available IC sockets.
  • the substrate 6 could be combined into an array system by using, for example, standardised 96, 384 or 1536 well plate format.
  • FIG. 1 has a single passage 28, in other embodiments, there may be a plurality of passages 28.
  • the portion of the substrate in which the passage is formed can have a number of different configurations which are illustrate schematicalfy in Figures 2A to 2J. Parts of the system shown in Figures 2A to 2J that correspond to parts shown in Figure 1 have been given corresponding reference numerals for ease of reference.
  • Figures 2A and 2B are views of a portion of the substrate 6 from above, and Figures 2C to 2J are cross-sectional representations of a portion of the substrate 6.
  • the aperture 34 formed on a front side of the passage 28 is formed on a thin membrane 36.
  • the membrane 36 is positioned in a cavity 38 having a substantially pyramidal shape.
  • a top surface 40 of the cavity is substantially rectangular or square shaped, and a bottom surface 42 of the cavity 38 is also substantially square or rectangular.
  • the cavity comprises side walls 44, and in this embodiment each side wall has an angle of approximately 54.7° to a plane substantially perpendicular to the surface of the substrate 6.
  • the aperture 34 of the passage 28 is also formed on the thin membrane 36. As can be seen from Figures 2C to 2J. there are number of different configurations that are possible for the relative positions of the membrane 36.
  • the passage 28 typically has a diameter of 0.5 to 10 ⁇ m. and the thin membrane 36 has a thickness in the range of 0.1 to 30 ⁇ m.
  • the membrane 36 can be formed from silicon, silicon nitride, silicon oxide, polymers or various combinations of these materials.
  • Working electrodes 54 are positioned at least partially on the thin membrane 36.
  • the electrodes 54 are positioned up to 100 ⁇ m away from the passage 28, preferably less than 10 ⁇ m from the passage 28. and have submicrometer to sub- millimetre dimensions.
  • the electrodes 54 are utilized to sense the presence of a particle cell at the aperture 34.
  • a substrate may be manufactured in several different ways.
  • the substrate fabrication may be divided into two major parts, the formation of the particle positioning structure and the deposition and formation of electrode on the particle positioning structure.
  • Passage forming process • Define and structure the front to backside passage by photomasking and advanced silicon etch (ASE) the silicon. • Deposit silicon nitride onto both sides of the substrate. • Define windows in the nit ⁇ de on the rear side of the substiate by photomasking followed by reactive ion etch (PJE)
  • the reference electrodes may be formed by evaporating a conducting material, preferably a metal onto the substrate 6
  • metal/metal salt reference electrode for example, Ag/AgCl
  • chemical or electrochemical oxidation of the approp ⁇ ate metal is performed
  • the reference electiode may be positioned either on the substrate 6 or in one or more of the canals
  • FIG. 3A an embodiment of the system of Figure 1 is shown m which a reference electiode 46 is formed m a canal 14 or 16 In Figure 3 A.
  • the iefeience electrode 46 is situated within a compartment 48 winch is separated fiom the canal 14 16 by a conducting bridge 50
  • the ieference electrode 46 is positioned directly in a canal 14 16.
  • the iefeience electiode 46 is positioned directly in a canal 14, 16 but is shielded fiom the solution m the canal by a polymeric coating 52
  • the working electrodes 54 can have a number of different configurations Figures 4A to 4F show several diffeient possible configurations of the working electrode
  • the working electrode 54 shown in the embodiments shown in Figures 4A to 4F is positioned close to the aperture 34
  • Electrodes 56 may be positioned on the substrate 6 further away from the aperture 34 as shown in Figure 4E
  • the electrodes 56 may be used as counter electrodes and/or pseudo reference electiodes as well as working electrodes
  • a voltage is applied on the working electrode 54 against the reference electiode 46 Cu ⁇ ent will flow upon the application of a voltage
  • the current will flow between the working electrode 54 and reference electrode 46
  • a three-electrode sj'stem the voltage is applied between the working electrode 54 and the reference electrode 46
  • a high impedance circuit is positioned between the working electrode 54 and reference electrode 46 with the consequence that the current will flow between the working electrode 54 and the counter electrode 56
  • the canals 14, 16 may be formed directly m the substrate 6 or m a second structure When the canals 14, 16 are formed m a second structure the)' may have a number of different functions such as
  • the dimensions of the canals are chosen so that the solution flow in the canals will be laminar.
  • the laminar characteristics of the fluid in the canals 14, 16 make it possible to test and/or deliver to the particle several different compounds within a short timescale.
  • the material used to form the canals may be hydrophobic and/or hydrophilic in order to achieve a specific solution flow characteristic.
  • An advantage of the system described particularly with reference to Figure 1 is that the canals 14, 16 are positioned to allow for easy access to all liquid and electrical connections.
  • the system 60 is particularly suitable for the electric characterisation of a single particle such as a cell.
  • the system comprises a substrate 62 sandwiched between a front side structure 64 and a rear side structure 66.
  • the front side structure 64 defines a front canal (not shown), and the rear side structure 66 defines a rear canal (not shown).
  • the front canal is formed from a transparent material which aids in the optical inspection analysis of a particle positioned at an aperture (not shown) defining a front side of a passage (not shown) formed in the substrate 62. Particles and liquids can be injected into the front canal, and liquids can be injected into the rear canal.
  • the system 60 further comprises a rack 72 comprising, for example, a compound library to be tested on the positioned particle.
  • the rack 72 is connected to the front canal.
  • the rear canal is connected to a pump 74 which can generate positive pressure for the priming of the passage, and negative pressure for the positioning of a particle on the aperture.
  • External equipment 76 such as voltmeters, potentiostats. frequency generators, amperemeters, impedance analysers etc are connected to the substrate 62 via electrical connections of the type shown in Figure 1.
  • a common feature of all the external equipment, is that each device responds to local changes in the liquid composition close to the electrode surface, and/or to physical changes in the interface between the electrode and the liquid. These local changes originate from the positioned particle. The connections are appropriate for the application of the external equipment is met.
  • the system may include connectors for working, reference and counter electrodes for amperometric recordings in a three- electrode setup; for working and reference electrode for amperometric recordings in a two-electrode setup; for working, counter and reference electrode for dielectric measurements in a three-electrode setup; for working and reference electrode or working and counter electrode for dielectric measurements in a two- electrode setup.
  • Pumps and other external equipment are preferably controlled by a computer 78.
  • a central task of the present invention is to capture and position a single particle in a close proximity to the working electrodes, which preferably are positioned on the substrate 6.
  • the working electrodes are utilized to sense the presence of the particle.
  • Figure 6A shows an optical microscopy image of a cell 80 captured on the substrate 6 of the system of Figure 1.
  • Figure 6B a graphic representation of the working electrode configuration utilized in 6A is presented.
  • the cell 80 is positioned on top of the passage 28 at the aperture 34, in close proximity to the working electrodes 54 (hidden by the cell 80 in Figure 6A), which are defined as an opening in the insulating resist 82.
  • the positioning of the cell 80 can both be monitored optical!' as shown in Figure 6A. or electrically. When the cell is positioned O ⁇ 'er the aperture there will be an increase in the elect ⁇ cal resistance along passage 28.
  • FIG. 6C 5 the resistance over a front to back passage prior to positioning cell (AA) and the resistance with a positioned cell (BA) are presented.
  • the resistance is determined between an electrode positioned in a front side canal and an electrode positioned in a rear-side canal.
  • the Error bar indicates a 95 % confidence interval for a population of 4.
  • the present invention relates to a platform employed for a variety of single particle characterization and manipulation techniques, particularly electrochemical techniques and methods. Below, the different techniques, and their associated substrate designs are discussed.
  • the present invention possesses features necessary for electrochemical experiments on single particles.
  • Figure 7A-B two different circuits 84, 86, for electrochemical experiments are depicted.
  • the circuits 84, 86 are utilized for experiments in a two- and three-electrode configuration, respectively.
  • a voltage is applied from a potentiostat 88, between a reference electrode 90 and working electrode 92 and the current at 94 is measured with an ammeter.
  • the current is passed between a working electrode 96 and a counter electrode 98.
  • the potential of the working electrode 96 is monitored relative to a reference electrode 100, situated in a circuit with high input impedance causing a negligible current to be drawn through the reference electrode 100.
  • the counter electrode 98 can be of any material, since its properties do not influence the behaviour of the sensing working electrode. Piefeiablv the counter electrode is composed of a materia] that does not pioduce any substances that can ieach and inteifere with the processes taking place at the w oi king electi ode e g platinum oi gold
  • electrolytic techniques i e electi o chemical techniques involving the oxidation oi reduction of an analyte at the surface of an electrode as the iesult of an applied potential
  • electrolytic techniques i e electi o chemical techniques involving the oxidation oi reduction of an analyte at the surface of an electrode as the iesult of an applied potential
  • electrolytic techniques involve cyclic voltammetry, linear sweep voltammetry, chronoampeiometry DC potential amperometry (refe ⁇ ed to as amperometry) chionocoulometry. sampled cu ⁇ ent polaiography. normal pulse voltammetry, differential pulse voltammetry, square wave voltammetry and stopping voltammetry
  • Figuie SA illustrates graphically a cu ⁇ ent ⁇ eisus tune trace from an ampeiometric recording, utilizing a working electrode 102 shown m more detail in Figure SB with an applied potential of -100 mV vs Ag(AgCl) pseudo reference electrode.
  • Befoie a tune indicated by 104.
  • the substrate solution canals only' contained phosphate buffer At home 104.
  • the phosphate buffer is instantly exchanged with 1 mM of fer ⁇ cyamde , leading to an instant increase m reduction current At time 106.
  • FIG. 9B illustrates graphically a cyclic voltammogram in phosphate buffei (AB) and in 10 niM fern cyanide (BB).
  • AB phosphate buffei
  • BB 10 niM fern cyanide
  • the substrate 128 in Figure 9B contains a passage 130 for particle positioning, and two gold electiodes 132 and 134 with dimensions m the ⁇ m range
  • the working electrode aiea is defined m a photoresist 136 and is connected to the external envnonment through comiectoi 138
  • the electrodes on the substrate can be further modified to peiform various analytical tasks
  • Figure 1OA a cyclic voltammogram obtained from a Prussian blue modified gold working electrode 142 with the geometry shown m Figure 1OB. defined in photoresist 144 Prussian blue is a hexacyanoferrate complex with catalytical activity towards, among others, hydrogen peroxide [ A Karyakin and Lo Gorton, Talanta, 43, 1996. 1597- 1605]
  • the anodic peak (AC) is almost on top of the cathodic peak (BC), which is characteristic for adsorbed redox species
  • Amperomet ⁇ c iecordmgs fiom single particles, particularly cells, are highly dependent on the particle to electrode distance.
  • the reference electiode should be positioned as close as possible to the working electrode, although not closer than a distance corresponding to twice the reference electrode diameter, to decrease uncompensated solution resistance.
  • electroactive neurotransmitters e g. adrenaline, noradrenaline and dopamine
  • O is the total charge transferred.
  • / is the current.
  • i is time.
  • M is the number of molecules, e is the elementary charge 1 .6x10-19 and n is the number of moles of electrons transferred per mole of neurotransmitter.
  • a cell 150 is positioned onto an aperture 152 formed by passage 154 in close relation to working electrode 156, in order to achieve as high collection efficiency as possible.
  • stimuli can be added, either as compounds in solution canal 166 or as a voltage pulse over the passage 154. Depending on the type of stimuli, initiation, decrease or disruption of the secretory characteristic of the cell will be monitored.
  • the secretory event is initiated with the movement and fusion of a neurotransmitter-containing vesicle 158 with the cell membrane and consequent diffusion of the neurotransmitters 160 into the extracellular space.
  • a voltage is applied between the reference electrode 168 and the working electrode 156.
  • the extracellular neurotransmitters 160 are electrochemically converted to reduced or oxidised counterparts 162 on the working electrode 156, resulting in the flow of electrons between the working 156 and reference electrode 168.
  • the flow of electrons is measured with an ammeter, and the resulting current is proportional to the amount of neurotransmitters released by the cell.
  • A.mpeiomet ⁇ c biosensors are based on the measurements of an electrode cu ⁇ ent which is geneiated when an enzyme-modified electrode is exposed to a solution containing the analyte of inteiest
  • the biosensoi pioduces a current proportional to the analyte concentration
  • Enzymatic biosensoi can be divided into the 1 st . 2 nd and 3 1 generation
  • biosensors of the 1 st generation is based on detection of eithei the consumption of a cosubstrate (e g oxygen) or the enzymatic geneiation of a product (e g H 2 O 2 in the case of many oxidises, for example glutamate oxidise. GlOx)
  • a cosubstrate e g oxygen
  • a product e g H 2 O 2 in the case of many oxidises, for example glutamate oxidise. GlOx
  • the detection of the product can be catalysed, e g Prussian blue modified surface for H 2 O 2
  • the 2 nd generation biosensor is based on a mediator (Med), able to transport electrons between an enzyme and the electrode
  • Biosensors of the 3 rQ generation do not require any co-substrate or m ⁇ diatoi since the electrons are transfe ⁇ d directly from the active site of the enzyme to the electrode (direct election transfer, DET)
  • Some enzymes able to diiectly communicate with the electrode are. among others laccase, hydrogenase
  • Oxidoreductase enzymes present in living cells can communicate with electrodes through electron transfer mediators in the process of MET
  • the characteristics of the mediator will determine the location of the enzyme or group of enzymes that can be probed, i e hydrophilic mediators, e g fer ⁇ cyamde, will only be able to communicate with enzymes situated m the cytoplasmic membrane [J Tkac, et al , Biosensors and Bioelectromcs, 2003, 18(9), 1125-1134], whereas lipophilic mediators, e g qumones, are able to penetrate the cytoplasmic membrane, thus facilitating the communication with intracellular oxidoreductase enzymes [A.
  • Figures 12A-C illustrate the principles of electron transfer with intracellular enzymes (Figure 12A) and membrane bound enzymes (Figure 12A). Direct electron transfer with cellular is shown in Figure 12C.
  • FIG 12A electrochemical communication with intracellular enzymes is presented.
  • a membrane soluble mediater 200 diffuses through the plasma membrane and is reduced by intracellular enzymes 202.
  • the oxidized enzyme is re-reduced by intracellular cofactors 204, which are consequently oxidized to their oxidized counterparts 206.
  • the reduced mediator 208 can then diffuse out from the cell and deliver its electrons 210 to the electrode, resulting in the formation of a current proportional to the intracellular enzyme activity.
  • membrane bound enzymes 202 are probed using water soluble mediator redox couple 212, 214, resulting in a current proportional to the membrane bound enzyme activity.
  • Direct, mediatorless, electron transfer is presented in Figure 12C.
  • the enzyme 202 directly delivers the electrons 210 from the intracellular co factor redox couple 204. 206 to the electrode, also resulting in a current proportional to the activity of the probed enzyme.
  • the working electrode 54 in Fi sure 1. can be modified with various sensing elements to form capacitive biosensors.
  • a capacitive biosensor 222 is represented in Figure 13.
  • the working electrode 54 e.g. gold
  • a layer 220 e.g. thiols, promoting adsorption of the sensing element 222. e.g. a protein or antibody.
  • the analyte 224 of interest binds or interacts with the sensing element 222, a perturbation of the interface equilibrium takes place, resulting in a detectable signal.
  • the substrate according to the present invention can be utilized for dielectric measurements on single particles, particularly electrochemical impedance spectroscopic studies on single cells.
  • Dielectric characterization of single particles can reveal information on the interaction of a particle or single cell with a substrate (base platform), as well as give information about the functional and morpho-physiological characteristic of the cell/particle.
  • the dielectric response of the cell can be presented by a number of equivalent schemes consisting of interconnected capacitance and resistance elements [Joachim Wegener, Sigrid Zink, Peter Rosen, Hans-Joachim Galla.
  • impedance/dielectric measurements are performed in the 1 to 108 Hz frequency
  • FIG. 14 An example of an impedance scheme modelling the impedance properties of a cell is presented in Figure 14.
  • a constant phase element describes the interaction (contact) of a cell with an opening on a platform.
  • Rm and Cm are the resistance and capacitance of a cell membrane
  • Z cy ⁇ is an impedance of cytosol, which can include dielectric characteristics of nucleus and other organelles in the cell.
  • K so ⁇ represents the ion transfer characteristics of a solution surrounding the cell.
  • More precise modelling of a single cell in microsystems by equivalent circuit elements can also be sensitive to the geometry of canals and electrodes surrounding the cell due to a heterogeneous electrical field [Shady gawad, Karen Cheung. Urban Seger. Arnaud Bertsch and Philippe Renaud. Dielectric spectroscopy in a micromachined flow cytometer: theoretical and practical considerations. Lag CMp, 2004, 4, 241-251.]
  • the present invention provides a platform for studies of dielectric properties of single cells and enables monitoring of functional and morphological characteristics of cells including viability.
  • the substrate according to the invention is useful for el ⁇ ctrorotation experiments on single particles, particularly cells.
  • FIG. 15 A A substrate configuration suitable for electrorotation experiments is presented in Figure 15 A.
  • the electrodes 250 are given a 90° phase difference, causing the particle 252 to rotate in the generated electric field.
  • a microscopy image of a possible substrate 254 for electrorotational studies is presented in Figure 15B.
  • a passage 256 is utilized for particle capture and electrodes 258 generate the electric field utilized for particle characterization.
  • the substrate according to the invention can also be utilized as a cell manipulation tool, performing electroporation.
  • a cell manipulation tool performing electroporation.
  • By applying short voltage pulses to a captured cell pores in a cell are created allowing, otherwise membrane impermeable, water-soluble molecules to enter the intracellular compartment via a combination of diffusion, electrophoresis and electroosrnosis.
  • molecules include DNA, dyes, drugs, proteins, peptides, amino acids etc.
  • Optical techniques are easily interfaced to the present invention by manufacturing the front side structure from an optically transparent material.

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Abstract

Système permettant de déterminer et/ou surveiller les propriétés d'une particule individuelle, le système comprenant un ensemble muni d'une structure avant (8), d'une structure arrière (10) et d'un substrat. Ce substrat (6) comprend : une première partie de surface supérieure, et une première partie de surface inférieure destinées à maintenir la particule individuelle, un premier site comprenant un passage (28) dans le substrat, une première extrémité de ce passage (28) étant en contact avec un premier domaine (14) au niveau de la première partie de surface supérieure (30) du substrat, et une seconde extrémité de ce passage étant en contact avec un second domaine (16) au niveau de la première partie de surface inférieure (32) du substrat, la première extrémité du passage définissant une ouverture aménagée pour recevoir la particule individuelle, au moins une électrode située sur la première partie de surface supérieure du substrat une électrode de référence (18), en contact électrique avec le premier domaine et au moins une électrode de travail (54) située sur une surface du substrat et en contact électrique avec le premier domaine. La première extrémité du passage est conçue pour placer la particule individuelle maintenue au niveau du premier site, la particule séparant ainsi le premier domaine du site du second domaine. Ladite ou lesdites électrodes sur la partie de surface supérieure se trouvant ainsi à proximité immédiate de la première extrémité du passage. Le système comprend en outre: des moyens de positionnement pour placer la particule individuelle au niveau de l'ouverture; et au moins une interface (22) pour servir d'interface entre le substrat et un système d'analyse.
PCT/EP2007/002292 2006-03-16 2007-03-15 Système Ceased WO2007104565A1 (fr)

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WO2001033207A1 (fr) * 1999-11-04 2001-05-10 Advanced Sensor Technologies, Inc. Reseau de capteurs microscopiques multisites a circuits d'analyse et de commande integres
WO2002103354A1 (fr) * 2001-06-20 2002-12-27 Sophion Bioscience A/S Appareil et procede pour determiner et/ou surveiller les proprietes electrophysiologiques des canaux ioniques
EP1471352A1 (fr) * 2003-04-24 2004-10-27 Hewlett-Packard Development Company, L.P. Biopuce pour l'analyse de caracteristiques éléctriques de membranes biologiques

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EP0938674B1 (fr) * 1996-11-16 2005-06-01 NMI Naturwissenschaftliches und Medizinisches Institut an der Universität Tübingen in Reutlingen Stiftung Bürgerlichen Rechts Systeme de microelements, procede de mise en contact de cellules situees dans un environnement liquide et procede permettant de realiser un systeme de microelements
DK1040349T4 (da) * 1997-12-17 2013-02-25 Mds Analytical Technologies Us Inc Positionering og elektrofysisk karakterisering af individuelle celler og rekonstituerede membransystemer på bærere med mikrostruktur
US6300108B1 (en) * 1999-07-21 2001-10-09 The Regents Of The University Of California Controlled electroporation and mass transfer across cell membranes
US6682649B1 (en) * 1999-10-01 2004-01-27 Sophion Bioscience A/S Substrate and a method for determining and/or monitoring electrophysiological properties of ion channels
DE19948473A1 (de) * 1999-10-08 2001-04-12 Nmi Univ Tuebingen Verfahren und Vorrichtung zum Messen an in einer flüssigen Umgebung befindlichen Zellen
AU2001293676B2 (en) * 2000-10-02 2006-07-27 Sophion Bioscience A/S System for electrophysiological measurements

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WO2001033207A1 (fr) * 1999-11-04 2001-05-10 Advanced Sensor Technologies, Inc. Reseau de capteurs microscopiques multisites a circuits d'analyse et de commande integres
WO2002103354A1 (fr) * 2001-06-20 2002-12-27 Sophion Bioscience A/S Appareil et procede pour determiner et/ou surveiller les proprietes electrophysiologiques des canaux ioniques
EP1471352A1 (fr) * 2003-04-24 2004-10-27 Hewlett-Packard Development Company, L.P. Biopuce pour l'analyse de caracteristiques éléctriques de membranes biologiques

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