CRYSTALLINE FORMS
FIELD OF THE INVENTION
[0001] The present invention relates to novel crystalline forms of 6-fluoro-8-(4-methyl- piperazin-l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin-l-yl)-phenyl]- amide, processes for their preparation, pharmaceutical compositions containing them, and their use in therapy.
BACKGROUND
[0002] Serotonin (5-HT) is implicated in many psychiatric disorders including, but not limited to, depression, generalized anxiety, eating disorders, dementia, panic disorder, and sleep disorders. Serotonin is also implicated in gastrointestinal disorders, cardiovascular regulation, motor disorders, endocrine disorders, vasospasm and sexual dysfunction. Serotonin receptors are subdivided into at least 14 subtypes, see Barnes & Sharp, 1999, Neuropharmacology, 38:1083-1152, which is incorporated herein by reference. These various subtypes are responsible for serotonin's action in many pathophysiological conditions. [0003] The 5-HTι family of receptors has high affinity for serotonin and consists of five related receptors, including the 5-HTJB and 5-HTJD receptor subtypes. Compounds that interact with the 5-HTι family are known to have therapeutic potential in the above mentioned disorders and diseases. In particular, compounds that are 5HTIB and 5HT!D antagonist are known to be antidepressant and anxiolytic agents. Compounds that are 5HTiB and 5HTJD agonists have been used in the treatment of migraine.
[0004] The compound 6-fluoro-8-(4-methyl-piperazin-l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin-l-yl)-phenyl]-amide is a 5-HTiB receptor antagonist and is described in U.S. Patent Application No. 10/051,776, filed January 16, 2002, the subject matter of which is incorporated herein in its entirety by reference.
[0005] In the formulation of drug compositions, it is important for the active pharmaceutical ingredient (API) to be in a form in which it can be conveniently handled and processed. This is of importance, not only from the point of view of obtaining a commercially viable
manufacturing process, but also from the point of view of subsequent manufacture of pharmaceutical formulations (e.g., oral dosage forms such as tablets) comprising the active pharmaceutical ingredient.
[0006] Further, in the manufacture of oral drug compositions, it is important that a reliable, reproducible and constant plasma concentration profile of the active pharmaceutical ingredient is provided following administration to a patient.
[0007] Chemical stability, solid-state stability, and "shelf life" of the active pharmaceutical ingredient are also very important factors. The active pharmaceutical ingredient, and compositions containing it, should be capable of being effectively stored over appreciable periods of time, without exhibiting a significant change in the physico-chemical characteristics
(e.g., chemical composition, density, hygroscopicity and solubility) of the active pharmaceutical ingredient.
[0008] Amorphous materials are typically more difficult to handle and to formulate, provide unreliable dissolution, and are often unstable. Thus, in the manufacture of commercially viable and pharmaceutically-acceptable drug compositions, it is desirable to provide the active pharmaceutical ingredient in a substantially crystalline and stable form.
BRIEF DESCRIPTION OF THE DRAWINGS
[0009] Figure 1 is an X-ray powder diffractogram of 6-fϊuoro-8-(4-methyl-piperazin~l-yl)-4- oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin- 1 -yl)-p hen yl] -amide form I. [0010] Figure 2 is an X-ray powder diffractogram of 6-fluoro-8-(4-methyl-piperazin-l-yl)~4- oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin-l-yl)-phenyl]-amide form II. [0011] Figure 3 is an X-ray powder diffractogram of 6-fluoro-8-(4-methyl-piperazin-l-yl)-4- oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin-l-yl)-phenyl]-amide form LU.
DETAILED DESCRIPTION
[0012] The present invention provides crystalline forms of 6-fluoro-8-(4-methyl-piperazin-l-yl)- 4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin-l-yl)-phenyl]-amide, referred to herein as Compound I, having the following structure:
[0013] Compound I is a 5-HT]B ligand, capable of acting as an antagonist at 5-HTiB receptors.
A process for the synthesis of Compound I is described in Example 72 of U.S. Patent
Application No. 10/051,776, which is incorporated herein by reference.
[0014] We have surprisingly found that Compound I can exist in more than one crystal form.
We have also found that crystalline forms of Compound I exhibit properties such as convenient handling and chemical and solid-state stability. Crystalline forms of Compound I are referred to herein as "forms." Numeric designations provided herein for crystalline forms of Compound I are arbitrary and do not refer to relative thermodynamic stability or any other characteristic.
[0015] Various definitions are made throughout this document. Most words have the meaning that would be attributed to those words by one skilled in the art. Words specifically defined either below or elsewhere in this document have the meaning provided in the context of the present invention as a whole and as typically understood by those skilled in the art.
[0016] One aspect of the present invention provides Compound I, in substantially crystalline form.
[0017] As used herein, the term "substantially crystalline" means at least about 50% crystalline and ranging up to about 100% crystalline. The present invention provides Compound I that is at least about 50% crystalline, at least about 60% crystalline, at least about 70% crystalline, at least about 80% crystalline, at least about 90% crystalline, at least about 95% crystalline, at least about 98% crystalline, or at least about 100% crystalline in form.
[0018] The degree or percentage of crystallinity may be determined by the skilled person using
X-ray powder diffraction (XRPD). Other techniques, such as solid-state nuclear magnetic resonance (NMR), FT-IR, Raman spectroscopy, differential scanning calorimetry (DSC) and microcalorimetry, may also be used.
[0019] Crystalline forms of Compound I (i.e., the compounds of the invention) may be in the form of a solvate, including but not limited to a hydrate (e.g., a monohydrate), or otherwise (e.g., in the form of an anhydrate). In some embodiments of the invention, the crystalline form of
Compound I is in the form of an anhydrate. In some embodiments of the invention, the crystalline form of Compound I is in the form of a hydrate.
[0020] We have found that the compounds of the invention have improved stability over 6- fluoro-8-(4-methyl-piperazin-l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl- piperazin-l-yl)-phenyl]-amide prepared as described in U.S. Patent Application No. 10/051,776. [0021] According to a further aspect of the invention, there are provided stable forms of Compound I.
[0022] As used herein, the terms "stable" or "stability" include chemical stability and solid-state stability. The term "chemical stability" means that the compound can be stored in an isolated form, or in the form of a formulation in which it is provided in admixture with pharmaceutically acceptable carriers, diluents or adjuvants (e.g., in an oral dosage form, such as tablet, capsule, etc.), under normal storage conditions, with little or no chemical degradation or decomposition. "Solid-state stability" means that the compound can be stored in an isolated solid form, or in the form of a solid formulation in which it is provided in admixture with pharmaceutically acceptable carriers, diluents or adjuvants (e.g., in an oral dosage form, such as tablet, capsule, etc.), under normal storage conditions, with little or no solid-state transformation (e.g., crystallization, recrystallization, solid-state phase transition, hydration, dehydration, solvatization or desolvatization).
[0023] Examples of "normal storage conditions" include temperatures ranging from about minus 80 °C to about plus 50 °C, from about 0 °C to about plus 40 °C, and from 15 °C to about 30 °C; pressures ranging from about 0.1 bars to about 2 bars, more particularly at about atmospheric pressure; relative humidities ranging from about 5% to about 95%, more particularly from about 10% to about 75%; and/or exposure to 460 lux of UV/visible light for prolonged periods, for example, at least about 6 months.
[0024] According to one aspect of the present invention, there is provided 6-fluoro-8-(4-methyl- piperazin- 1 -yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin- 1 -yl)-phenyl]- amide (Compound I) form I.
[0025] Compound I form I, according to the present invention, is characterized in providing an X-ray powder diffraction pattern, as shown in Figure 1, and exhibiting substantially the following 2-theta values and relative intensities:
[0026] The peaks, identified from the 2-theta values, have been extracted from the diffractogram for Compound I form I. The following definitions were used to compare relative intensities, which were derived from the diffractogram measured with fixed slits:
[0027] The above definitions are also used when identifying the diffractogram peaks for other crystalline forms of Compound I described herein.
[0028] Compound I form I is a crystalline form exhibiting advantageous properties, such as convenient handling, chemical stability and solid-state stability.
[0029] According to another aspect of the present invention, there is provided 6-fluoro-8-(4- methyl-piperazin- 1 -yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-ρropionyl-piperazin- 1 -yl)- phenyl] -amide (Compound I) form II.
[0030] Compound I form II, according to the present invention, is anhydrous and is characterized in providing an X-ray powder diffraction pattern, as shown in Figure 2, and exhibiting substantially the following 2-theta values and relative intensities:
[0031] Compound I form II is a crystalline form exhibiting advantageous properties, such as convenient handling, chemical stability and solid-state stability.
[0032] According to another aspect of the present invention, there is provided 6-fluoro-8-(4- methyl-piperazin- 1 -yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin- 1 -yl)- phenyl]-amide (Compound I) form III.
[0033] Compound I form III, according to the present invention, is a monohydrate and is characterized in providing an X-ray powder diffraction pattern, as shown in Figure 3, and exhibiting substantially the following 2-theta values and relative intensities:
[0034] Compound I form III, according to the present invention is further characterized by having crystals with a triclinic unit cell with the following parameters: = 9.182(1) A b = 11.974(1) A c = 13.151(1) A or= 81.12(1)°
^= 83.54(1)°
7= 70.95(1)°
[0035] Compound I form III is a crystalline form exhibiting advantageous properties, such as convenient handling, chemical stability and solid-state stability.
[0036] The compounds of the present invention may be obtained by crystallizing Compound I.
[0037] According to a further aspect of the invention, there are provided processes for the preparation of compounds of the invention which comprise crystallizing Compound I.
[0038] 6-fluoro-8-(4-methyl-piperazin-l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4- propionyl-piperazin-l-yl)-phenyl]-amide (Compound I) may be crystallized in the presence of an appropriate solvent system or may be crystallized in the absence of a solvent (e.g., crystallization may be from a melt, under supercritical conditions, or achieved by sublimation).
[0039] Where a solvent system is used for crystallization, a suitable solvent system may be heterogeneous or homogeneous and may thus comprise one or more solvents. Examples of appropriate solvents include, but are not limited to alkyl acetates (e.g., linear or branched Cι-6 alkyl acetates, such as ethyl acetate, isopropyl acetate, butyl acetate and n-butyl acetate), lower
(e.g., linear or branched C1-6) alkyl alcohols (e.g., methanol, ethanol, iso-propanol), aliphatic hydrocarbons (e.g., iso-octane, n-heptane) and aromatic hydrocarbons (e.g., toluene), dialkyl ketones (e.g., acetone, methyl iso-butyl ketone), acetonitrile, dichloromethane (methylene chloride), dimethylsulfoxide, tetrahydrofuran, dialkyl ethers (e.g., di-isopropyl ether), amides
(e.g., N,N-dimethylformamide), and water.
[0040] Crystallization of compounds of the present invention from a suitable solvent system, containing at least one solvent, may be achieved by attaining supersaturation in a solvent system, by solvent evaporation, by temperature decrease, and/or via the addition of anti-solvent (i.e., a solvent in which the compounds of the invention are poorly soluble).
[0041] Crystallization temperatures and crystallization times will depend upon the concentration of the compound in solution, and upon the solvent system used.
LUU4ZJ Crystallization may also be initiated and/or effected with or without seeding with crystals of the appropriate crystalline compound of the invention, and/or by adjustment of pH.
[0043] Crystallization of compounds of the present invention can be achieved starting from pure
6-fluoro-8-(4-methyl-piperazin-l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl- piperazin-l-yl)-phenyl]-amide (Compound I) of any form, or mixtures of any form.
[0044] Compounds of the invention may be prepared in the form of solvates, hydrates, and anhydrates, and salts.
[0045] Whether an anhydrate or a solvate crystallizes is related to the kinetics and equilibrium conditions of the respective forms at the specific conditions. As will be appreciated by those skilled in the art, the crystalline form that is obtained depends upon both the kinetics and the thermodynamics of the crystallization process. Under certain thermodynamic conditions (e.g., solvent system, temperature, pressure and concentration of compound of the invention), one crystalline form may be more stable than another (or indeed any other).
[0046] Crystalline forms that have a relatively low thermodynamic stability may be kinetfcally favored. Therefore, kinetic factors such as time, impurity profile, agitation, the presence or absence of seeds, etc., may influence which form crystallizes. One of skill in the art may, therefore, adapt the procedures discussed herein in order to obtain different crystalline forms.
[0047] A further aspect of the present invention is to provide processes for the preparation of 6- fluoro-8-(4-methyl-piperazin- l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl- piperazin-l-yl)-phenyl] -amide (Compound I) crystalline forms I, II, and III.
[0048] Compound I form I can be obtained upon crystallization from a mixture of dichloromethane and ethanol.
[0049] Compound I form II can be obtained upon crystallization from a mixture of dimethylsulf oxide, water and ethanol.
[0050] Compound I form III can be obtained upon crystallization from a mixture of dimethylsulfoxide and water.
[0051] Compound I form LU can also be obtained upon recrystallization of any other form of
Compound I from wet methanol.
[0052] The preparation and characterization of different forms of the compounds of the invention are described hereinafter. Different crystalline forms of the compounds of the invention may be readily characterized using, for example, X-ray powder diffraction (XRPD) methods or Raman spectroscopy.
[0053] Each of crystalline forms I, II, and III of 6-fluoro-8-(4-methyl-piperazin-l-yl)-4-oxo-4H- chromene-2-carboxylic acid [4-(4-propionyl-piperazin-l-yl)-phenyl]-amide, obtained according
to the present invention, are substantially free from other crystal and non-crystal forms of 6- fluoro-8-(4-methyl-piperazin- 1 -yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl- piperazin-l-yl)-phenyl]-amide. The phrase "substantially free from other crystal and non-crystal forms" as used herein, means that the desired crystal form of 6-fluoro-8-(4-methyl-piperazin-l- yl)-4-oxo-4H-chromene-2-carboxylic acid [4-(4-propionyl-piperazin- 1 -yl)-phenyl]-amide, prepared according to the present invention, contains less than 50%, less than 40%, less than 30%, less than 20%, less than 10%, less than 5% or about 0% of any other crystal and non- crystal forms of 6-fluoro-8-(4-methyl-piperazin-l-yl)-4-oxo-4H-chromene-2-carboxylic acid [4- (4-propionyl-piperazin- 1 -yl)-phenyl] -amide.
[0054] One method to ensure that a particular crystalline form is prepared in the absence of other crystalline forms, is to carry out crystallization by seeding with nuclei and/or seed crystals of the desired crystalline form in the complete absence of nuclei and/or seed crystals of other crystalline forms.
[0055] Compounds of the invention may be isolated using any of a variety of techniques well known to those of skill in the art, including, but not limited to, decanting, filtering, or centrifuging.
[0056] According to another aspect of the present invention, there are provided pharmaceutical compositions comprising the compounds of the invention. A pharmaceutical composition of the invention may comprise a compound of the invention in admixture with at least one pharmaceutically acceptable carrier, diluent, adjuvant, or excipient, and optionally other therapeutic ingredients.
[0057] The compounds of the invention may be further processed before formulation into a suitable pharmaceutical composition. For example, the crystalline form may be milled or ground into smaller particles.
[0058] According to another aspect of the present invention, there is provided the use in therapy of any of the compounds of the invention.
[0059] According to another aspect of the present invention, there is provided the use of any of the compounds of the invention in the manufacture of a medicament for use in the treatment of depression, generalized anxiety, eating disorders, dementia, panic disorders, sleep disorders, gastrointestinal disorders, motor disorders, endocrine disorders, vasospasm, or sexual dysfunction.
[0060] According to a further aspect of the present invention, there is provided a method of treatment of a human or animal suffering from depression, generalized anxiety, eating disorders, dementia, panic disorder, sleep disorders, gastrointestinal disorders, motor disorders, endocrine
disorders, vasospasm, or sexual dysfunction, comprising administering to the human or animal an effective amount of any of the compounds of the invention.
[0061] As used herein, the terms "treating" or "treatment" includes therapeutic treatment, as well as prophylaxis of a disease or condition. Additionally, "treating" or "treatment" refers to the amelioration and/or elimination of a disease or condition.
[0062] In accordance with this aspect of the invention, the compounds of the present invention may be administered and used as described in U.S. Patent Application 10/051,776. [0063] The compounds of the invention have the advantage that they are in a form that provides for improved ease of handling. Further, the compounds of the invention have the advantage that they may be produced in forms that have improved chemical and solid-state stability as well as lower hygroscopicity. Thus, the compounds may be stable when stored over prolonged periods. [0064] The invention is further illustrated by way of the following examples, which are intended to elaborate several embodiments of the invention. These examples are not intended to, nor are they to be construed to, limit the scope of the invention. It will be clear that the invention may be practiced otherwise than as particularly described herein. Numerous modifications and variations of the present invention are possible in view of the teachings herein and, therefore, are within the scope of the invention.
EXAMPLES
Example 1. Experimental procedures. Standard X-ray diffraction measurement conditions
[0065] X-ray powder diffraction analyses (XRPD) were performed on samples prepared according to standard methods (see for example Giacovazzo et al., eds., Fundamentals of Crystallography, Oxford University Press (1992); Jenkins & Snyder, eds., Introduction to X-Ray Powder Diffractometry, John Wiley & Sons, New York (1996); Bunn, ed., Chemical Crystallography, Clarendon Press, London (1948); and Klug & Alexander eds., X-ray Diffraction Procedures, John Wiley & Sons, New York (1974), each of which is incorporated herein by reference). X-ray analyses were performed using a Siemens D5000 diffractometer. [0066] Sample preparation for D5000: -30 mg material, silicon wafers. Samples were spun at 30 rpm to improve counting statistics. X-rays were generated by a: 'copper long-fine focus tube' operated at 40 kV and 40 mA, wavelength of X-rays - 1.54 A. The data for each sample were obtained using the standard scintillation detector. The collimated X-ray source was passed through an Automatic Variable Divergence Slit set at V20 (20mm path-length) and the reflected radiation directed through a 2 mm anti-scatter slit and a 0.2mm detector slit. Each sample was
exposed for 1 second per 0.02° 28 increment (continuous scan mode) over the range 2° to 40° 28 in theta-theta mode. The running time for each sample was thus 31 minutes 41 seconds. The secondary soller slit was left in position.
[0067] A Dell Optiplex 686 NT 4.0 Workstation operating with Diffrac+ version was used for control and data capture. The following definitions were used to compare relative intensities:
% Relative Intensity* Definition
25 - 100 vs (very strong)
10 - 25 s (strong)
3 - 10 m (medium)
1 - 3 w (weak)
* The relative intensities were derived from diffractograms measured with fixed slits. Differential scanning calorimetry (DSC)
[0068] Samples were analyzed using a Mettler Toledo 822e with a heating rate of 10 °C/minute.
Example 2. Compound I Free Base Form I.
[0069] A mixture of Compound I free base (4.0 g) and dichloromethane (120 ml) was heated to reflux temperature and the solution was screened through filter aid, which was washed with dichloromethane (10 ml). The combined filtrate plus wash was diluted with ethanol (100 ml) and dichloromethane was removed by distillation to a temperature of 78 °C. The mixture was cooled to 23 °C and the solid was filtered off, washed with ethanol (20 ml) and dried overnight in vacuo at 65 °C. The yield of Compound I free base Form I was 3.24 g.
[0070] DSC showed onset of melting at 246.4 °C with peak at 247.2 °C
[0071] The crystals were analysed by XRPD. The diffractogram is shown in Figure 1 and the data are tabulated below:
Angle 2-Theta ° Intensity % Relative Intensity
7.1 100.0 s
14.4 15.7 s
16.7 10.7 s
14.6 8.3 m
24.0 7.8 m
8.4 4.1 m
26.1 3.0 rn
21.3 2.4 w
24.9 2.0
29.0 1.8 w
23.4 1.8 w
23.1 1.7 w
35.9 1.3 w
24.4 1.3 w
28.2 1.2 w
Example 3. Compound I Free Base Form II (Anhydrous).
[0072] A mixture of Compound I free base (10.0 g) and dimethylsulfoxide (120 ml) was heated to 110 °C. The solution was screened through filter aid, which was washed with dimethylsulfoxide (5 ml). The combined filtrate plus wash was cooled to 78 °C and a mixture of water (20 ml) and ethanol (70 ml) was added over 30 minutes, maintaining the temperature at 76-78 °C. The mixture was cooled and stirred at ambient temperature for 16 hours and then at 4 °C for a further 30 minutes. The solid was filtered off, washed with a mixture of water (1.25 ml) and ethanol (22.5 ml) and dried overnight in vacua at 60 °C. The yield of Compound I free base Form II (anhydrous) was 8.3 g.
[0073] The crystals were analysed by XRPD. The diffractogram is shown in Figure 2 and the data are tabulated below:
Angle 2-Theta ° Intensity % Relative Intensity
24.0 100.0 vs
24.6 93.1 vs
22.0 73.6 vs
21.1 59.8 vs
9.8 49.9 vs
18.6 45.7 vs
19.8 44.1 vs
19.1 41.5 vs
15.5 39.2 vs
11.7 37.8 vs
15.7 30.7 vs
16.2 28.0 vs
26.2 20.5 s
10.7 19.4 s
20.3 17.8 s
Example 4. Compound I Free Base Form III (Monohydrate).
[0074] A mixture of Compound I free base (20.0 g) and dimethylsulfoxide (240 ml) was heated to 95 °C. The solution was screened through filter aid, which was washed with dimethylsulfoxide (40 ml). The combined filtrate plus wash was cooled to 85 °C and water (180 ml) was added over 20 minutes whereupon the temperature rose to 87 °C. The mixture was cooled and stirred at 23 °C for 16 hours and then at 4 °C for a further one hour. The solid was filtered off, washed with a mixture of water (40 ml) and ethanol (40 ml) and dried overnight in vacuo at 60 °C. The yield of Compound I free base Form III was 18.7 g.
[0075] DSC showed loss of water (hydrate) (onset 53.3 °C, peak 78.4 °C) followed by onset of melting at 232.7 °C with a peak at 236.9 °C.
[0076] The crystals were analysed by XRPD. The diffractogram is shown in Figure 3 and the data are tabulated below:
Angle 2-Theta c Intensity % Relative Intensity
24.4 100.0 vs
18.7 63.5 vs
24.6 62.9 vs
16.2 57.6 vs
11.8 54.5 vs
19.6 50.3 vs
22.6 49.1 vs
10.8 46.2 vs
21.1 32.6 vs
9.7 30.4 vs
17.7 29.4 vs
15.9 26.4 vs
16.6 24.7 s
14.9 22.4 s
6.8 21.0 s
Example 5. Single-Crystal Diffraction Analysis of Compound I Form III (Monohydrate).
[0077] A suitable brownish yellow single crystal was obtained after recrystallization of Compound I form I from wet methanol. The diffraction intensity data were collected with graphite monochromatized MoK( ) radiation using a Nonius MiraCol collimator on a KappaCCD Single-Crystal X-Ray diffractometer equipped with a κ-axis goniometer and a CCD area detector (Nonius, 1998, KappaCCD Server Software, Delft, The Netherlands, which is incorporated herein by reference).
[0078] The diffraction raw data were processed within the Denzo-SMN program package (Otwinowski & Minor, Denzo-SMN program package. Processing of X-ray diffraction data collected in oscillation mode, in Methods in Enzymology, 276:302-326, Carter & Sweet, eds., Academic Press, Inc. (1998), which is incorporated herein by reference), converting the information from the digital image frame to a file containing h, k, 1 indices, background and Lp corrected intensities of the diffraction spots, along with estimate of errors. A total of 205 image frames were collected, each frame by rotating the φ-axis 1.0°.
[0079] The structure was solved by direct methods, SIR92 (Altomare et al, 1992, Sffi.92. Program for automatic solution of crystal structures from X-ray diffraction data, which is incorporated herein by reference) and refined with full-matrix least-squares within the MaXus software package (Mackay et al, 1999, MaXus program package. A state-of-the art computer program for solving, refining and publishing crystal structures from X-ray diffraction data. Chemistry Department, The University, Glasgow, Scotland. Developed for Mac Science Co., Japan and Nonius B.V., The Netherlands, which is incorporated herein by reference). Hydrogen atoms were positioned at their ideal position 0.96 A from the parent non-H atom or found from the difference Fourier maps. Only the hydrogen involved in the intramolecular H-bond was allowed to refine freely. All hydrogens were supplied with isotropic displacement parameters, Uiso = 0.05 A2. Fifteen reflections marked by the software were omitted from the final refinement due to discrepancies. Relevant crystal data together with experimental details and structural refinement parameters of the compound are summarized in the following table. No absorption correction was done. Crystal Data and Details of Structure Determination:
Crystal data
Molecular formula: Mo Ka radiation
C28H32 F N504 * H20 λ = 0.71073 A
Asymmetric unit: C28H32 F N5 0 * H20 Cell parameters: from 1
Mr = 521.59 + 18.02
Triclinic M = 0.10 mm"1
P -l a= 81.12(1)° a = 9.182(1) A β= 83.54(1)° b = 11.974(1) A γ = 70.95(1)° c = 13.151(1) A T = 298 K
V= 1347.5(2) A3 Brownish yellow prism
Z= 2 0.25 x 0.13 0.04 mm
Dx= 1.3301(2) Mg πf3 (000) = 572
Data collection
KappaCCD diffractometer
6 = 27.47 No absorption correctio
k = O → 11 No of frames: 205 k = -14 → 15 Exposure time (s): 30
/ = O → 11 DX: 30 mm
5605 measured reflections Phi scan range (°): 1.0
2128 observed reflections / > 3σ (/)
Refinement
Refinement on F2 (Δ/σ)max = 0.001
R = 0.049 Apm- = 0. 15e A"3 wR = 0.052 A 7rai„ = -0.18e A'3
5 = 1.202 Extinction correction: None
2128 observations
352 parameters
H positions incl. with fixed temperature parameters (/jso = 0.05 A2
Weighting scheme: 'Count statistics' w=l/(σ2Fo 2+(0.0300) F2)
Atomic scattering factors: from D. Waasmaier & A.Kirfel
Data collection: KappaCCD Server Software (Nonius, 2000, supra). Cell refinement: Denzo-SMN Software Package. Data reduction: MaXus Software Package. Program used to solve and refine the structure: SIR92, MaXus LSQ. Molecular graphics: ORTEPII, XXmol, PLUTON.
Molecular conformation
[0080] The overall conformation of the molecule is bent with two 'arms' of different lengths stretching outwards and forming a cavity. These 'arms' are the substituted pyrazinyl rings, deviating from the fluorine substituted ten-member chromene plane. The substance crystallizes from wet methanol as a monohydrate. The molecular conformation is strongly influenced by an intramolecular H-bond between nitrogen N20 and oxygen O2 [N20-H20...O2= 2.656(1) A]. This close contact and the scarcity of H-bond donators in the molecule are important for the crystal packing. The water molecule is H-bonded in the cavity. The total solvent accessible area, including the water molecule, was calculated to 22 A3/VunitCeiι- The calculated density is 1.3301(2) Mg m"3. The space group is triclinic P-l. The unit cell dimensions are: a = 9.182(1) A b = 11.974(1) A c = 13.151(1) λ a= 81.12(1)° /?= 83.54(1)° γ= 70.95(1)°. [0081] The foregoing examples are meant to illustrate the invention and are not to be construed to limit the invention in any way. Those skilled in the art will recognize modifications that are within the spirit and scope of the invention. [0082] All references cited herein are hereby incorporated by reference in their entirety.