WO2002060960A2 - New polymers based on n-carbamyl-n'-dimethylsilyl methyl-piperazine traceless linkers for the solid phase synthesis of phenyl based libraries - Google Patents
New polymers based on n-carbamyl-n'-dimethylsilyl methyl-piperazine traceless linkers for the solid phase synthesis of phenyl based libraries Download PDFInfo
- Publication number
- WO2002060960A2 WO2002060960A2 PCT/EP2002/000312 EP0200312W WO02060960A2 WO 2002060960 A2 WO2002060960 A2 WO 2002060960A2 EP 0200312 W EP0200312 W EP 0200312W WO 02060960 A2 WO02060960 A2 WO 02060960A2
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- WIPO (PCT)
- Prior art keywords
- denotes
- compounds
- resin
- alkyl
- formula
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
- DFSTWGYNPJCOSH-UHFFFAOYSA-N CC(C)(C)OC(N(C)c1cccc([Si](C)(C)CBr)c1)=O Chemical compound CC(C)(C)OC(N(C)c1cccc([Si](C)(C)CBr)c1)=O DFSTWGYNPJCOSH-UHFFFAOYSA-N 0.000 description 1
- BFRHMVJJJGUHDI-UHFFFAOYSA-N CC(C)(C)[Si](C)(C)Oc1cccc(Br)c1 Chemical compound CC(C)(C)[Si](C)(C)Oc1cccc(Br)c1 BFRHMVJJJGUHDI-UHFFFAOYSA-N 0.000 description 1
- 0 C[Si](C)(CN(CC1)CCN1C(NC*)=O)c1cc(NC2=CC=*2)ccc1 Chemical compound C[Si](C)(CN(CC1)CCN1C(NC*)=O)c1cc(NC2=CC=*2)ccc1 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B80/00—Linkers or spacers specially adapted for combinatorial chemistry or libraries, e.g. traceless linkers or safety-catch linkers
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/42—Introducing metal atoms or metal-containing groups
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08G—MACROMOLECULAR COMPOUNDS OBTAINED OTHERWISE THAN BY REACTIONS ONLY INVOLVING UNSATURATED CARBON-TO-CARBON BONDS
- C08G65/00—Macromolecular compounds obtained by reactions forming an ether link in the main chain of the macromolecule
- C08G65/02—Macromolecular compounds obtained by reactions forming an ether link in the main chain of the macromolecule from cyclic ethers by opening of the heterocyclic ring
- C08G65/32—Polymers modified by chemical after-treatment
- C08G65/329—Polymers modified by chemical after-treatment with organic compounds
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08G—MACROMOLECULAR COMPOUNDS OBTAINED OTHERWISE THAN BY REACTIONS ONLY INVOLVING UNSATURATED CARBON-TO-CARBON BONDS
- C08G65/00—Macromolecular compounds obtained by reactions forming an ether link in the main chain of the macromolecule
- C08G65/02—Macromolecular compounds obtained by reactions forming an ether link in the main chain of the macromolecule from cyclic ethers by opening of the heterocyclic ring
- C08G65/32—Polymers modified by chemical after-treatment
- C08G65/329—Polymers modified by chemical after-treatment with organic compounds
- C08G65/333—Polymers modified by chemical after-treatment with organic compounds containing nitrogen
- C08G65/33303—Polymers modified by chemical after-treatment with organic compounds containing nitrogen containing amino group
- C08G65/3331—Polymers modified by chemical after-treatment with organic compounds containing nitrogen containing amino group cyclic
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08G—MACROMOLECULAR COMPOUNDS OBTAINED OTHERWISE THAN BY REACTIONS ONLY INVOLVING UNSATURATED CARBON-TO-CARBON BONDS
- C08G65/00—Macromolecular compounds obtained by reactions forming an ether link in the main chain of the macromolecule
- C08G65/02—Macromolecular compounds obtained by reactions forming an ether link in the main chain of the macromolecule from cyclic ethers by opening of the heterocyclic ring
- C08G65/32—Polymers modified by chemical after-treatment
- C08G65/329—Polymers modified by chemical after-treatment with organic compounds
- C08G65/336—Polymers modified by chemical after-treatment with organic compounds containing silicon
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B50/00—Methods of creating libraries, e.g. combinatorial synthesis
- C40B50/14—Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support
- C40B50/18—Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support using a particular method of attachment to the solid support
Definitions
- the present invention relates to polymers characterised by novel silicon linkers based on the carbamyl piperazine moiety, methods of preparing these polymers and their use in the solid phase synthesis of compounds or libraries of compounds embracing a phenyl ring in their structure.
- an hydrogen atom substitutes the silicon itself. Therefore the released compounds show no trace of the tethering point (in the hydrogen case) or show further diversity (when additional groups are inserted).
- SPOC Solid phase organic chemistry
- traceless linkers are those based on the silicon chemistry. These lead to a phenyl ring with no trace of the anchoring point owing to an ipso-desilylation process under acidic conditions (TFA) or to a fluoride mediated cleavage under basic conditions [tetrabuthyl ammonium fluoride (TB ⁇ F)]. According to a further option other non polar functionalities such as nitro, bromo or acetyl can be introduced, if desired, during the detachment step.
- the general usefulness of the new linker is exemplified here by applying it on phenyl rings possessing functional groups such as hydroxy, formyl and amino, which can in turn, after deprotection, be derivatised.
- a more complex pattern of substitution e.g. trifluoromethylpiperazine
- Resin denotes polystyrene, optionally cross linked with divinyl benzene or polyethylenglycol
- R 1 denotes hydrogen, C-j-Cg-alkyl, C ⁇ -Cg-alkenyl, C ⁇ -C ⁇ -alkynyl C ⁇ -CQ- alkoxy, halogen, NO2 or CF3
- R2 denotes a group selected from hydroxy, amino, preferably
- N-C-i-C ⁇ -alkylamino, and formyl being optionally protected by a suitable protective group, or a 5 or 6 membered saturated or unsaturated nitrogen heterocycle, optionally containing one or two additional heteroatoms selected from the group consisting. of oxygen, nitrogen and sulfur, and being optionally substituted by a group selected from Ci-C ⁇ -alkyl, Ci-C ⁇ -alkoxy, halogen,
- Preferred polymers are those of general formula (I), wherein Resin denotes polystyrene, optionally cross linked with divinyl benzene or ⁇ polyethylenglycoi; . .
- R denotes hydrogen, C ⁇ -C4-alk l, C-j-C4-alko.xy, fluorine, chlorine, bromine, or NO2;
- R2 denotes a group selected from hydroxy, amino, preferably
- -C4-alkylamino, and formyl being optionally protected by a suitable protective group, or a 5 or 6 membered saturated or unsaturated nitrogen heterocycle, optionally containing one additional nitrogen heteroatom which is substituted by a protective group selected from fluorenylmethyoxycarbonyl and t-butoxycarbonyl.
- More preferred polymers are those of general formula (I), wherein
- Resin denotes polystyrene cross linked with divinyl benzene;
- R 1 denotes hydrogen, methyl, methoxy , fluorine, chlorine, bromine, or NO2, preferably hydrogen;
- R2 denotes hydroxy, being protected by a group selected from tertbutyldimethylsilyl, methoxy-ethoxymethyl (MEM) and methyl, or N-methylamino, being protected by a group selected from fluorenylmethyloxycarbonyl (FMOC) and t-butoxycarbonyl (BOC), or formyl, being protected to form a dioxolane ring, or piperazin-1-yl, being substituted by a protective group selected from fluorenylmethyoxycarbonyl and t-butoxycarbonyl.
- the term resin refers to polystyrene, optionally crosss linked with divinyl benzene, preferably with high swelling properties or highly cross linked macroporous polystyrene beads with low swelling capacity or cross linked ⁇ polystyrene - polyethylenglycol.
- the preferred one. is a resin made with cross linked polystyrene - 1% divinylbenzene, 200-400 mesh of the so called Merrifield type. '
- alkyl groups meant here are branched and unbranched alkyl groups having 1 to 6 carbon atoms, preferably 1 to 4 carbon atoms, such as: methyl, ethyl, n-propyl, iso-propyl, butyl, iso-butyl, sec-butyl, tert-butyl, pentyl, iso-pentyl and hexyl.
- Alkenyl groups are. the branched and unbranched alkenyl groups with 2 to 6 carbon atoms, preferably 2 to 4 carbon atoms, provided that they have at least-one double bond, e.g. the alkyl groups mentioned above provided that they have at least one double bond, such as for example vinyl (provided that no unstable enamines or enolethers are formed), propenyl, iso-propenyl, butenyl, pentenyl and hexenyl.
- alkenyl- and alkenylen-groups mentioned above are to be understood as embracing optionally existing stereoisomers. Accordingly, for . instance the definition 2-butenyl is to be understood as embracing 2-(Z)-butenyl and 2-(E)-butenyl, etc..
- alkynyl groups refers to alkynyl groups having 2 to 6, preferably 2 to 4 carbon atoms provided that they have at least one triple bond, e.g. ethynyl, propargyl, butynyl, pentynyl and hexynyl.
- amino denotes a group selected from H2, N-C-]-C6-alkylamino, preferably N-C- ⁇ -C-4-alkylamino, N-di(C ⁇ -C6-alkyl)amino, preferably N-di(C ⁇ -C-4-alkyl)amino, wherein C-i-Cg-alkyl is as hereinbefore defined.
- Preferred aminogroups are selected from N-methylamino and N-ethylamino, preferably N-methylamino.
- the suitable protective groups that are applicable according to the invention may differ depending on the functional group they protect.
- the suitable protective group is preferably selected from methoxymethyl, benzyloxymethyl, t-butoxymethyl, tertbutyldimethylsilyl, tetrahydropyranyl, methoxyethoxyethyl and benzyl, preferred protecting group being tertbutyldimethylsilyl.
- the suitable protective group is preferably selected from fluorenylmethyloxycarbonyl (FMOC), benzyloxycarbonyl, t- butoxycarbonyl (BOC), allyloxycarbonyl preferred protecting group being FMOC and BOC.
- the formyl group is preferably protected by a protective group to form a group selected from 1 ,3-dioxolane, 1 ,3-dithiolane, preferred protecting group being 1 ,3- dioxolane.
- 5- or 6-membered nitrogen heterocycles are as follows: piperazine, pyrrolidine, piperidine, morpholine, benzimidazole, benzoxazole, imidazole, pyrazole, preferably piperazine, morpholine, piperidine.
- Halogen stands for fluorine, chlorine, bromine or iodine, preferably chlorine or bromine.
- bromo-derivatives of formula (II) are obtainable via conventional methods known in the art. Those derivatives of formula (II) wherein R2 denotes a functional group being protected as hereinbefore defined are obtainable from the unprotected starting materials according to well known methods in the art, pertaining to the introduction of known protective groups. Starting from the appropriate bromo-derivatives of formula
- the silyl-derivatives of formula (III) are available as follows. After activation by suitable organometallic reagents, preferably lithium alkyl reagents, more preferably branched or unbranched butyllithium reagents, at low temperature, preferably between -78°C and -20°C, most preferably between - 40 °C and - 60 °C, in an appropriate organic solvent, preferably in a solvent selected from the group consisting of tetrahydrofurane and diethylether, the dimethyl silyl bromomethyl chain is introduced to by addition of the appropriate chlorosilane to generate compound of formula (III). To obatin the compounds of formula (IV) on the compounds of formula
- a piperazine spacer is added by reaction with excess piperazine or using a Fmoc or Boc monoprotected piperazine in the presence of a base selected from the group triethylamine, pyridine, diisopropylethylamine, with diisopropylethylamine being the most preferred base to catch the generated acid.
- the reaction is preferably conducted under heating, preferably between 40-120°C, more preferred between 60- 100°C in an organic solvent selected from the group consisting of dimethylsulfoxide, N-methyl-pyrrolidone (NMP), ethanol wherein dimethylsulfoxide is most preferred.
- the compounds of formula (I) are obtained by reacting a slight excess (1.5 equivalent) of the compounds of formula (IV) with a polymeric resin being functional ized by isocyanate-groups.
- the reaction is preferably conducted in an apolar solvent selected from the group consisting of tetrahydrofurane, DMF, dichloromethane, with tetrahydrofurane being the most preferred solvent at moderate temperatures (between 0-40°C, preferably between 20-30°C).
- a base preferably of an organic base selected from the amines mentioned hereinbefore may be advisable.
- the most preferred base is disiopropylethylamine.
- R1 denotes hydrogen, C-i-C ⁇ -alkyl, C2-C6-alkenyl, C2-C6-alkynyI C-i-C ⁇ - alkoxy, halogen, NO2 or CF3;
- R 2 denotes a group selected from hydroxy, amino, preferably
- N-C-i-C ⁇ -alkylamino, and formyl being optionally protected by a suitable protective group, or a 5 or 6 membered saturated or unsaturated nitrogen heterocycle, optionally containing one or two additional heteroatoms selected from the group consisting of oxygen, nitrogen and sulfur, and being optionally substituted by a group selected from Ci-C -alkyl, C-j-C ⁇ -alkoxy, halogen,
- Preferred intermediates are those of general formula (IV), wherein R1 denotes hydrogen, C-j-C-4-alkyl, C-
- -C4-alkylamino, and formyl being optionally protected by a suitable protective group, or a 5 or 6 membered saturated or unsaturated nitrogen heterocycle, optionally containing one additional nitrogen heteroatom which is substituted by a protective group selected from fluorenylmethyoxycarbonyl and t-butoxycarbonyl.
- a protective group selected from fluorenylmethyoxycarbonyl and t-butoxycarbonyl.
- Rl denotes hydrogen, methyl, methoxy , fluorine, chlorine, bromine, or NO2, preferably hydrogen;
- R2 denotes hydroxy, being protected by a group selected from tertbutyldimethylsilyl, methoxy-ethoxymethyl (MEM) and methyl, or
- N-methylamino being protected by a group selected from fluorenylmethyloxycarbonyl (FMOC) and t-butoxycarbonyl (BOC), or formyl, being protected to form a dioxolane ring, or piperazin-1-yl, being substituted by a protective group selected from fluorenylmethyoxycarbonyl and t-butoxycarbonyl.
- FMOC fluorenylmethyloxycarbonyl
- BOC t-butoxycarbonyl
- formyl being protected to form a dioxolane ring
- piperazin-1-yl being substituted by a protective group selected from fluorenylmethyoxycarbonyl and t-butoxycarbonyl.
- R 2 denotes a suitably protected hydroxy, amino or formyl group
- R 2 denotes a suitably protected hydroxy, amino or formyl group
- the methods for the cleavage of the protective groups being applicable according to the invention are well known in the art. After cleavage of the protective group the hydroxy, amino. or formyl group can be further derivatised via conventional methods to lead to compounds of formula (I')
- Resin and Rl are as hereinbefore defined and
- R 3 denotes a group selected from -O-CO-C-
- the compounds of formula (I) (or (I')) can be easily cleaved from the resin under mild reaction conditions to lead to the products of formula (V) (scheme 2).
- X may either denote hydrogen, halogens (Br, F, I) or -COMe.
- Compounds (V) wherein X denotes hydrogen are obtainable by reacting compounds of formula (1) or (I') with tetrabutylammonium fluoride (TBAF), Cesium fluoride, KF, trifluoroacetic acid or triflic acid, preferably with TBAF under the reaction conditions that are usually applied for analogous cleavage reactions known in the art.
- TBAF tetrabutylammonium fluoride
- Cesium fluoride KF
- trifluoroacetic acid or triflic acid preferably with TBAF under the reaction conditions that are usually applied for analogous cleavage reactions known in the art.
- the crude compound was purified by flash chromatography (Silica-gel, eluent n- hexane-ethyl acetate 90-10).
- the compound was pure enough to be used in the following step, without further characterization.
- the resin bound compound was obtained starting from 150 mg of (isocyanate)- polystyrene resin. 150 mg, yellowish resin 1 H-NMR (solid state; gel phase in CD 2 CI 2 ; 300 MHz) 5.72 (1 H); 3.9-4.1 (4h); 3.26 (4H); 2.31 (4H); 2.16 (2H); 0.37 (6H)
- the resin bound compound was obtained starting from 300 mg of (isocyanate)- polystyrene resin. 300 mg, resin
- the resin bound compound was obtained starting from 1 g of (isocyanate)- polystyrene resin. 1 g, resin
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- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Medicinal Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Chemical & Material Sciences (AREA)
- Polymers & Plastics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- Engineering & Computer Science (AREA)
- Structural Engineering (AREA)
- Macromolecular Compounds Obtained By Forming Nitrogen-Containing Linkages In General (AREA)
- Addition Polymer Or Copolymer, Post-Treatments, Or Chemical Modifications (AREA)
Abstract
Description
Claims
Priority Applications (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CA002431927A CA2431927A1 (en) | 2001-01-29 | 2002-01-15 | New polymers based on n-carbamyl-n'-dimethylsilyl methyl-piperazine traceless linkers for the solid phase synthesis of phenyl based libraries |
| EP02703549A EP1360211A2 (en) | 2001-01-29 | 2002-01-15 | New polymers based on n-carbamyl-n'-dimethylsilyl methyl-piperazine traceless linkers for the solid phase synthesis of phenyl based libraries |
| JP2002561527A JP2004518015A (en) | 2001-01-29 | 2002-01-15 | Trace-free N-carbamyl-N'-dimethylsilylmethyl-piperazine linker for solid-phase synthesis of phenyl-based libraries |
| MXPA03006718A MXPA03006718A (en) | 2001-01-29 | 2002-01-15 | New polymers based on n-carbamyl-n -dimethylsilyl methyl-piperazine traceless linkers for the solid phase synthesis of phenyl based libraries. |
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| EP01101946 | 2001-01-29 | ||
| EP01101946.0 | 2001-01-29 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| WO2002060960A2 true WO2002060960A2 (en) | 2002-08-08 |
| WO2002060960A3 WO2002060960A3 (en) | 2002-10-17 |
Family
ID=8176316
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/EP2002/000312 Ceased WO2002060960A2 (en) | 2001-01-29 | 2002-01-15 | New polymers based on n-carbamyl-n'-dimethylsilyl methyl-piperazine traceless linkers for the solid phase synthesis of phenyl based libraries |
Country Status (5)
| Country | Link |
|---|---|
| EP (1) | EP1360211A2 (en) |
| JP (1) | JP2004518015A (en) |
| CA (1) | CA2431927A1 (en) |
| MX (1) | MXPA03006718A (en) |
| WO (1) | WO2002060960A2 (en) |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US10730984B2 (en) | 2016-12-08 | 2020-08-04 | Lg Chem, Ltd. | Modifier and modified conjugated diene-based polymer including functional group derived therefrom |
Family Cites Families (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| ES2213825T3 (en) * | 1996-05-20 | 2004-09-01 | Smithkline Beecham Corporation | CLOUD SILILO FOR ORGANIC SYNTHESIS IN SOLID PHASE OF MOLECULES CONTAINING ARILO. |
| WO1999017869A2 (en) * | 1997-10-03 | 1999-04-15 | Argonaut Technologies | Compositions for organic synthesis on solid phase and methods of using the same |
-
2002
- 2002-01-15 EP EP02703549A patent/EP1360211A2/en not_active Withdrawn
- 2002-01-15 WO PCT/EP2002/000312 patent/WO2002060960A2/en not_active Ceased
- 2002-01-15 CA CA002431927A patent/CA2431927A1/en not_active Abandoned
- 2002-01-15 MX MXPA03006718A patent/MXPA03006718A/en active IP Right Grant
- 2002-01-15 JP JP2002561527A patent/JP2004518015A/en active Pending
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US10730984B2 (en) | 2016-12-08 | 2020-08-04 | Lg Chem, Ltd. | Modifier and modified conjugated diene-based polymer including functional group derived therefrom |
Also Published As
| Publication number | Publication date |
|---|---|
| EP1360211A2 (en) | 2003-11-12 |
| CA2431927A1 (en) | 2002-08-08 |
| WO2002060960A3 (en) | 2002-10-17 |
| MXPA03006718A (en) | 2004-05-31 |
| JP2004518015A (en) | 2004-06-17 |
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