WO2001029205A2 - Method for genetic manipulation - Google Patents
Method for genetic manipulation Download PDFInfo
- Publication number
- WO2001029205A2 WO2001029205A2 PCT/IB2000/001622 IB0001622W WO0129205A2 WO 2001029205 A2 WO2001029205 A2 WO 2001029205A2 IB 0001622 W IB0001622 W IB 0001622W WO 0129205 A2 WO0129205 A2 WO 0129205A2
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- Prior art keywords
- minos
- transposon
- transposase
- mrna
- injected
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01K—ANIMAL HUSBANDRY; AVICULTURE; APICULTURE; PISCICULTURE; FISHING; REARING OR BREEDING ANIMALS, NOT OTHERWISE PROVIDED FOR; NEW BREEDS OF ANIMALS
- A01K67/00—Rearing or breeding animals, not otherwise provided for; New or modified breeds of animals
- A01K67/60—New or modified breeds of invertebrates
- A01K67/61—Genetically modified invertebrates, e.g. transgenic or polyploid
- A01K67/65—Genetically modified arthropods
- A01K67/68—Genetically modified insects
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/87—Introduction of foreign genetic material using processes not otherwise provided for, e.g. co-transformation
- C12N15/90—Stable introduction of foreign DNA into chromosome
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases [RNase]; Deoxyribonucleases [DNase]
Definitions
- the present invention relates to a method for the transfer of genetic information in an organism using transposons
- the method according to the invention comprises the provision of a transposase activity, to catalyse transposon mobilisation, in the form of a ⁇ bonucleic acid encoding the transposase
- Minos a member of the Tc1 family of elements, was isolated from D. hydei and is absent from both D. melanogaster (14) and C. capitata (Unpublished data). Minos has been used for the germ line transformation of D. melanogaster and C. capitata (15-16) and using transient mobilisation assays it has also been shown to be active in embryos of D melanogaster, Aedes aegypti, Anopheles stephensi and Bombyx mori and in cell lines of D. melanogaster, Aedes aegypti, Anopheles gambiae and Spodoptera frugiperda (17- 19).
- transposable element mediated transformation is by co- injecting into pre-blastoderm embryos a mixture of two plasmids: one expressing transposase (Helper) but unable to transpose and one carrying the gene of interest flanked by the inverted terminal repeats of the element (Donor) Transformed progeny of injected animals is detected by the expression of dominant marker genes Such methods however, provide very low efficiencies of transformation
- TcMmanner elements have a number of advantages over viral and non-virai gene delivery systems, such as the stable, single-copy integration of transgenes into chromosomes, less strict maximal insert sizes, precise regulation of transposition by controlling the expression of transposase, increased accessibility of diverse tissue cells (20)
- Re-mobilisation of transgenes by the introduction of functional transposase (21-22) and germ line transformation with transposon vectors support powerful methodologies in molecular genetic research, such as analysis of genes either through loss-of-function (23-24) or gain-of-function (25-26) insertional mutagenesis, gene cloning by transposon tagging (27) and enhancer trapping (28-29)
- Random integration of transgenes into chromosomes is a clear advantage for these applications, if the frequency of transposition is not a limiting factor
- transposase activity may be provided on a DNA vector, as mentioned above, transposon mobilisation by this technique is not demonstrated Instead, transposase protein is produced in foreign hosts, purified and administered directly to cells harbouring the transposons
- transposase is not easily isolatable from natural sources, and recombinantly-de ⁇ ved transposase is shown to give a low efficiency of transformation
- the invention provides the transposase activity in the form of RNA encoding the transposase, coadmimstered to the cell with the transposon
- Minos mRNA in vitro synthesised Minos mRNA is used as a source of Minos transposase which offers the advantage of transient increased levels of transposase and eliminates the danger of random integration of the helper plasmid into the genome through non-homologous recombination
- the transposase encoded by Minos mRNA can mobilise Minos transposons from plasmids co-injected in Drosophila embryos Moreover, high frequencies of germ line transformation and re-mobilisation of a resident Minos transgene are achieved by this method
- a method for genetically modifying a cell by transposon mobilisation comprising the steps of a) delivering to the cell a nucleic acid comprising a transposon of the TcMmanner class, b) delivering to the cell a ribonucleic acid encoding a cognate transposase for said transposon, and c) causing the ribonucleic acid to be translated to produce the cognate transposase within the cell
- a method for mobilising a transposon resident in a host cell genome comprising the steps of a) delivering to the cell a ribonucleic acid encoding a cognate transposase for said transposon, and b) causing the ribonucleic acid to be translated to produce the cognate transposase within the cell, thus mobilising the resident transposon
- delivery of the nucleic acids may be accomplished by any available technique, including transformation/transfection, delivery by viral or non-viral vectors and microinjection Each of these techniques is known in the art Ribonucleic acids, in particular, may be delivered by microinjection or by viral transduction, particularly by RNA viruses in which the viral genome comprises the ribonucleic acid encoding the transposase.
- a nucleic acid may be any nucleic acid, including DNA and RNA, as well as synthetic nucleic acid homologues such as backbone-modified nucleic acids including methylphosphonates, phosphorothioates and phosphorodithioates, where both of the non-bridging oxygens are substituted with sulphur, phosphoroamidites, alkyl phosphot ⁇ esters and boranophosphates
- backbone-modified nucleic acids including methylphosphonates, phosphorothioates and phosphorodithioates, where both of the non-bridging oxygens are substituted with sulphur, phosphoroamidites, alkyl phosphot ⁇ esters and boranophosphates
- Achiral phosphate derivatives include 3'-0'-5'-S-phosphoroth ⁇ oate, 3'-S-5'-0-phosphoroth ⁇ oate, 3'-CH2-5'-0-phosphonate and 3'-NH-5'-0-phosphoroam ⁇ date
- ⁇ -anomer of deoxynbose may be used, where the base is inverted with respect to the natural ⁇ -anomer.
- the 2'-OH of the ribose sugar may be altered to form 2'-0-methyl or 2'-0-allyl sugars, which provides resistance to degradation without comprising affinity
- Modification of the heterocyclic bases must maintain proper base pairing.
- Some useful substitutions include deoxyuridme for deoxythymidine, 5-methyl-2'-deoxycytid ⁇ ne and 5-bromo-2'-deoxycytidine for deoxycytidine.
- 5-propynyl-2'-deoxyuridine and 5-propynyl-2'-deoxycytidine have been shown to increase affinity and biological activity when substituted for deoxythymidine and deoxycytidine, respectively.
- a ribonucleic acid as referred to herein, may be natural or modified RNA
- the RNA may comprise one or more of the modifications identified above.
- Translation of the ribonucleic acid to produce the transposase is preferably effected by endogenous cellular translation machinery. This may be under the control of natural cellular factors and sequences, and/or, particularly where the RNA is delivered by viral transduction, of viral sequences and factors.
- the cell may be any suitable cell type, including plant, insect and mammalian cells.
- the cells may be part of an organism, in primary culture, or established cell lines. Insect cells are preferred.
- the method of the present invention may be used to create transgenic organisms, such as transgenic insects, mammals or plants, by delivering to the oocyte a nucleic acid comprising a transposon and a ribonucleic acid encoding the transposase activity.
- the transposon is selected from the group consisting of Minos, manner, Hermes and piggyBac.
- the transposon is Minos
- Each transposon is advantageously employed with its natural cognate transposase, although the use of modified and/or improved transposases is envisaged
- the transposon preferably comprises a nucleic acid sequence encoding a heterologous polypeptide.
- This sequence will be integrated, together with the transposon, into the genome of the cell on transposon integration. Moreover, it will be excised, together with the transposon, when the latter excises on remobilisation.
- the heterologous polypeptide is a selectable marker. This allows cells having integrated transposons to be identified and the site of integration to be accurately mapped
- Figure 1 A) Structure of the C58 insertion. B) Mating schemes for the detection of excision and transposition of the stable Minos insertion (black arrowhead) in the C58 strain. For more information see Materials & Methods.
- FIG. 1 /nos-transposon excision from a donor plasmid mediated by Minos- transposase mRNA. Excision scheme and PCR results from medfly embryos. Lane 1 , No DNA (negative control of PCR), Lane 2; Non-injected embryos, Lane 3; injected with iW/ ⁇ os-mRNA/donor mix embryos (pool No I), Lane 4; injected with M/ ⁇ os-mRNA/donor mix embryos (pool No II), Lane 5; Excision in S2 cells (positive control of the PCR), Lane 6; injected with donor plasmid (pool V), Lane 7; injected with donor plasmid (pool VI).
- FIG. 3 (A) MihsCcw transposon. Medfly white cDNA and Hsp70 (promoter and terminator) sequences, are shown in white. Black arrows indicate the EcoRI restriction sites. Black bars above the map indicate the Minos sequences that were used as probe for the analysis of transformants. (B) Southern blot analysis of Ceratitis capitata transformants.
- Transformation efficiency expressed as percentage of individuals giving transformed progeny is a crucial parameter in designing strategies for tra ⁇ sgenesis, especially for species that are difficult to breed
- Mobile element mediated transgenesis is usually based on two components a transposon and the homologous or cognate transposase
- transposases of Tc7, Mos1 and Himarl can also catalyse transposition in vitro (12-14)
- transpositional activity may not be proportional to the amount of transposase present, high concentrations of transposase may inhibit transposition in vitro (33) and in vivo (15 our unpublished results)
- This work shows that the use of in vitro synthesised Minos transposase mRNA can result in high transformation efficiencies in both species that were tested, D melanogaster, and the medfly C capitata Until now,
- a transformation frequency of 3 2% was accomplished in Drosophila melanogaster by injecting pMiwl , a non-autonomous Minos transposon marked with a wild-type version of the white gene, to pre-blastoderm embryos carrying a chromosomal source of transposase (15) Similar transformation frequencies (ca 1-6%) have been reported for M/nos-med ⁇ ated transformation of Drosophila, using the same transposon combined with a transposase expressing (helper) plasmid (15) The efficiency of transformation in these cases depends on a) the levels of transposase in germ line nuclei and b) the transformation procedure itself Transposase levels may vary according to the promoter that drives its expression and, in the latter case, the amount of plasmid injected Gradual improvements of technique have resulted in increased transformation efficiencies In our hands, Minos-mediated transformation efficiency of up to 10% has been achieved in Drosophila (unpublished data), using various transposons and the helper plasmid
- Transformation rates of different insect species may vary widely, depending on the species and the transformation system. For example, transformation rates of 1 % and 3- 5% have been reported for Medfly with Minos and with piggyBac, respectively (16,9) of 4% and 8% for the mosquito Aedes aegypti with mariner and Hermes respectively (4,6), and 2% for the silkworm Bombyx mori with piggyBac (10).
- Integration rates expressed as the frequency of appearance of different phenotypically detectable events, are an additional criterion of efficiency of transformation. Integration rates may actually be more informative than transformation rates, because they indicate the number of different independent lines that can be obtained from a given transformation experiment. Integration rates in the Medfly using Minos transposase mRNA are approximately 18% for GO males and 13% for females. Southern analysis clearly indicated that the different eye phenotypes present among the G1 progeny from the same cage represent independent integration events.
- a rapid assay was used to test activity of the Minos transposase mRNA in Medfly embryos
- the assay is based on the observation that, as in other Tc1 /manner mobile elements, the parent chromatids are repaired after excision of Minos transposons, resulting in characteristic footprints at the site of the insertion, these events can be detected by PCR and characterised by sequencing (22) Excision/repair events can also be reproduced in plasmids that are introduced in insect cells and embryos expressing Minos transposase (17, 18, 19).
- this assay can also be used for testing transposase activity in Medfly embryos, after co-injection with a donor plasmid and transposase mRNA.
- Such assays can be invaluable for assessing and optimising new sources of transposase or for testing established transposon systems in new host species, before embarking into time-consuming transformation experiments.
- Minos transposon insertions in the genome in the absence of transposase suggests that there is no interaction between the Minos and other related mobile elements of the Tel/mariner family that are present in the D melanogaster and the Medfly genomes (15, our unpublished results).
- insertions can be mobilised upon expression of Minos transposase from a chromosomal position (16, 22)
- a Drosophila transformant C58
- This integration involves two copies of a white- marked transposon flanking a copy of the plasmid vector.
- Active Minos transposase induces mobilisation of either one or both transposons. Loss of both transposons in the germ line of C58 males was detected as exceptional daughters that had reverted to the w phenotype (15.9%).
- Transposition of the Miw1 transposon from the X into an autosome was detected in the germ line of C58 males as non-white sons among their progeny (31 ,8%). Approximately 38% of male GO's, injected with 100ug/mL, gave at least one coloured-eyed female progeny with eye phenotype different than the heterozygous C58 phenotype.
- Example 1 Introduction of Minos into the D. melanogaster genome.
- a /W/nos-based transposon in combination with a Minos transposase mRNA was introduced into preblastoderm Drosophila embryos by a microinjection procedure Approximately 800 embryos were injected and the 154 adults (GO generation) resulting from injected embryos were collected and backcrossed to w flies (Summarised in Table 1) Single male GOs were crossed to 4 w females whereas GO females were crossed with 3 w males in groups of two except from 6 females that were used in single crosses At least 6 of these GO adults (2 males and at least 4 females) were sterile, the 38,452 progeny of the rest were screened for the presence of non-white phenotypes.
- Example 2 Mobilisation of a Minos transposon using Minos transposase mRNA
- Minos transposase expressed in early Drosophila embryos from injected Minos mRNA can mobilise a Minos transposon from Drosophila chromosomes
- insertion of M ⁇ w1 on the X chromosome This insertion consists of two M ⁇ w1 transposons arranged in tandem and separated by a full copy of the plasmid vector (15)
- Fig 1A Two concentrations of mRNA (50 ⁇ g/mL and 100 ⁇ g/mL) were tested for their ability to induce a) excision of both transposons and b) re-insertion of the transposon in an autosome
- the Minos mRNA was introduced into D melanogaster preblastoderm embryos by microinjections Male GO flies were backcrossed to w flies and G1 progeny was screened for exceptional eye phenotypes Transposon loss in the germ line of the injected (GO) males was detected as female progeny that had reverted to the w phenotype Transpositions to an autosome were detected as exceptional non-white eyed sons (Fig 1B) The non-white female progeny of the GO males showed considerable variation in eye colour For example, of the 44 fertile males injected with 100 ⁇ g/mL mRNA 17 (38 6%) gave at least one female progeny with either weaker or stronger eye colour than the typical heterozyg
- Example 3 A rapid PCR assay for Minos transposase mRNA activity.
- a PCR-based assay was used to detect mRNA-encoded transposase activity in medfly embryos The assay is based on the observation that after Minos excision the chromatid (or donor plasmid) can be re-ligated in the host cell (17, 22) Appropriate DNA primers were used (see Materials and Methods) which are expected to generate a 211 bp fragment after precise excision of the transposon As shown in Figure 2 under the PCR conditions that were used the full 2 2 Kb transposon sequence was recovered as well Non-injected Medfly embryos did not give any of these bands The full-length product was amplified from embryos that were injected with donor plasmids but no Minos transposase mRNA The embryos that were injected with the mRNA/donor mix gave the 211 bp excision band along with the full length transposon sequence
- Example 4 Introduction of Minos into the C. capitata genome.
- a M/ ⁇ os-based transposon (pMihsCcW) in combination with Minos transposase mRNA was microinjected into approximately 2400 medfly preblastoderm embryos 382 adults (GO generation) were collected and backcrossed to w Medflies Groups of 10 GO males were crossed to 20 w females whereas groups of 20 GO females were crossed to 10 w males (Summarised in Table 4)
- 67,966 G1 flies were screened for the presence of a non-white phenotype (Table 5)
- a total of 665 flies with coloured eyes were recovered from 22 out of the 29 cages
- the frequency of transformants among the G1 flies varied between 7 437% and 0 055%, with only 3 of the cages giving one transformed fly Of the remaining 19 cages, 16 gave transformed progeny that varied in phenotype Phenotypic variations included a
- D3F:16 has only one female GO
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Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU12923/01A AU1292301A (en) | 1999-10-19 | 2000-10-19 | Method for genetic manipulation |
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| GB9924721.5 | 1999-10-19 | ||
| GBGB9924721.5A GB9924721D0 (en) | 1999-10-19 | 1999-10-19 | Protein production system |
| GB0016068.9 | 2000-06-30 | ||
| GB0016068A GB0016068D0 (en) | 2000-06-30 | 2000-06-30 | Method for genetic manipulation |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| WO2001029205A2 true WO2001029205A2 (en) | 2001-04-26 |
| WO2001029205A3 WO2001029205A3 (en) | 2001-09-07 |
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ID=26244571
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/IB2000/001622 Ceased WO2001029205A2 (en) | 1999-10-19 | 2000-10-19 | Method for genetic manipulation |
Country Status (2)
| Country | Link |
|---|---|
| AU (1) | AU1292301A (en) |
| WO (1) | WO2001029205A2 (en) |
Cited By (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB2387173A (en) * | 2002-03-05 | 2003-10-08 | Arrow Therapeutics Ltd | Transposon |
| WO2003097826A1 (en) * | 2002-05-16 | 2003-11-27 | Minos Biosystems Limited | Use of minos in functional genomics |
| FR2850668A1 (en) * | 2003-01-31 | 2004-08-06 | Centre Nat Rech Scient | New isolated nucleic acid comprising mariner family mobile genetic elements, useful for e.g. therapeutic insertion of DNA into target nucleic acid, are derived from hydrothermal eukaryotes |
Family Cites Families (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5840865A (en) * | 1992-09-14 | 1998-11-24 | Institute Of Molecular Biology And Biotechnology/Forth | Eukaryotic transposable element |
| US6225121B1 (en) * | 1992-09-14 | 2001-05-01 | Institute Of Molecular Biology And Biotechnology/Forth | Eukaryotic transposable element |
| US5614398A (en) * | 1994-11-18 | 1997-03-25 | The University Of Maryland Biotechnology Institute | Gene transfer system for insects |
| WO1998040510A1 (en) * | 1997-03-11 | 1998-09-17 | Regents Of The University Of Minnesota | Dna-based transposon system for the introduction of nucleic acid into dna of a cell |
| CA2300972A1 (en) * | 1997-08-22 | 1999-03-04 | Biotechnology And Biological Sciences Research Council | Use of mariner transposan in the production of transgenic animals |
| CA2309000A1 (en) * | 1997-11-13 | 1999-05-27 | Regents Of The University Of Minnesota | Tc1-based transposon vectors |
-
2000
- 2000-10-19 AU AU12923/01A patent/AU1292301A/en not_active Abandoned
- 2000-10-19 WO PCT/IB2000/001622 patent/WO2001029205A2/en not_active Ceased
Cited By (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB2387173A (en) * | 2002-03-05 | 2003-10-08 | Arrow Therapeutics Ltd | Transposon |
| WO2003097826A1 (en) * | 2002-05-16 | 2003-11-27 | Minos Biosystems Limited | Use of minos in functional genomics |
| FR2850668A1 (en) * | 2003-01-31 | 2004-08-06 | Centre Nat Rech Scient | New isolated nucleic acid comprising mariner family mobile genetic elements, useful for e.g. therapeutic insertion of DNA into target nucleic acid, are derived from hydrothermal eukaryotes |
| WO2004078962A1 (en) * | 2003-01-31 | 2004-09-16 | Centre National De La Recherche Scientifique (Cnrs) | Mobile genetic elements belonging to the mariner family in hydrothermal eukaryotes |
Also Published As
| Publication number | Publication date |
|---|---|
| WO2001029205A3 (en) | 2001-09-07 |
| AU1292301A (en) | 2001-04-30 |
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