[go: up one dir, main page]

WO2001090951A3 - An internet-linked system for directory protocol based data storage, retrieval and analysis - Google Patents

An internet-linked system for directory protocol based data storage, retrieval and analysis Download PDF

Info

Publication number
WO2001090951A3
WO2001090951A3 PCT/US2001/016375 US0116375W WO0190951A3 WO 2001090951 A3 WO2001090951 A3 WO 2001090951A3 US 0116375 W US0116375 W US 0116375W WO 0190951 A3 WO0190951 A3 WO 0190951A3
Authority
WO
WIPO (PCT)
Prior art keywords
retrieval
data
allows
analysis
internet
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/US2001/016375
Other languages
French (fr)
Other versions
WO2001090951A2 (en
WO2001090951A9 (en
Inventor
Leonard A Herzenberg
Wayne Moore
David Parks
Leonore Herzenberg
Vernon Oi
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Leland Stanford Junior University
Original Assignee
Leland Stanford Junior University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Leland Stanford Junior University filed Critical Leland Stanford Junior University
Priority to AU2001263335A priority Critical patent/AU2001263335A1/en
Publication of WO2001090951A2 publication Critical patent/WO2001090951A2/en
Anticipated expiration legal-status Critical
Publication of WO2001090951A9 publication Critical patent/WO2001090951A9/en
Publication of WO2001090951A3 publication Critical patent/WO2001090951A3/en
Ceased legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06Q—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL OR SUPERVISORY PURPOSES; SYSTEMS OR METHODS SPECIALLY ADAPTED FOR ADMINISTRATIVE, COMMERCIAL, FINANCIAL, MANAGERIAL OR SUPERVISORY PURPOSES, NOT OTHERWISE PROVIDED FOR
    • G06Q10/00—Administration; Management
    • G06Q10/10—Office automation; Time management
    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
    • G06F16/20—Information retrieval; Database structures therefor; File system structures therefor of structured data, e.g. relational data
    • G06F16/25—Integrating or interfacing systems involving database management systems
    • G06F16/258—Data format conversion from or to a database
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/30—Data warehousing; Computing architectures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/60—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for patient-specific data, e.g. for electronic patient records
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H70/00—ICT specially adapted for the handling or processing of medical references
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics

Landscapes

  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • General Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Business, Economics & Management (AREA)
  • Databases & Information Systems (AREA)
  • Public Health (AREA)
  • Primary Health Care (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Epidemiology (AREA)
  • Strategic Management (AREA)
  • Entrepreneurship & Innovation (AREA)
  • Human Resources & Organizations (AREA)
  • General Physics & Mathematics (AREA)
  • Data Mining & Analysis (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Economics (AREA)
  • Marketing (AREA)
  • Operations Research (AREA)
  • Quality & Reliability (AREA)
  • Tourism & Hospitality (AREA)
  • General Business, Economics & Management (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biophysics (AREA)
  • Bioethics (AREA)
  • General Engineering & Computer Science (AREA)
  • Automatic Analysis And Handling Materials Therefor (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)

Abstract

The present invention is related to databases and the exchange of scientific information. Specifically the invention disclosed a unified scientific database that allows researchers to easily share their data with other researches. The present invention also allows for the ease of data collection, annotation, storage, management, retrieval and analysis of scientific data through and into the database. In addition, it allows for archival storage and retrieval of data collected directly from laboratory instruments to ensure data consistency for patent and other purposes. It also allows for ease of sharing data between laboratories in remote locations. The present invention also supports the automated creation of experimental protocols.
PCT/US2001/016375 2000-05-19 2001-05-18 An internet-linked system for directory protocol based data storage, retrieval and analysis Ceased WO2001090951A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2001263335A AU2001263335A1 (en) 2000-05-19 2001-05-18 An internet-linked system for directory protocol based data storage, retrieval and analysis

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US20548900P 2000-05-19 2000-05-19
US60/205,489 2000-05-19

Publications (3)

Publication Number Publication Date
WO2001090951A2 WO2001090951A2 (en) 2001-11-29
WO2001090951A9 WO2001090951A9 (en) 2003-09-18
WO2001090951A3 true WO2001090951A3 (en) 2004-08-05

Family

ID=22762394

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2001/016375 Ceased WO2001090951A2 (en) 2000-05-19 2001-05-18 An internet-linked system for directory protocol based data storage, retrieval and analysis

Country Status (2)

Country Link
AU (1) AU2001263335A1 (en)
WO (1) WO2001090951A2 (en)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6611817B1 (en) 1999-06-17 2003-08-26 International Business Machines Corporation Automated technique for code generation of datastream mappings
US7555492B2 (en) 1999-11-05 2009-06-30 The Board Of Trustees At The Leland Stanford Junior University System and method for internet-accessible tools and knowledge base for protocol design, metadata capture and laboratory experiment management
US6947953B2 (en) 1999-11-05 2005-09-20 The Board Of Trustees Of The Leland Stanford Junior University Internet-linked system for directory protocol based data storage, retrieval and analysis
AU2002353018A1 (en) * 2001-12-03 2003-06-17 Dyax Corporation Library screening
US7491367B2 (en) * 2002-06-04 2009-02-17 Applera Corporation System and method for providing a standardized state interface for instrumentation
US20050038776A1 (en) * 2003-08-15 2005-02-17 Ramin Cyrus Information system for biological and life sciences research
WO2005020123A2 (en) * 2003-08-15 2005-03-03 Applera Corporation Information system for biological and life sciences research
US20050221357A1 (en) 2003-09-19 2005-10-06 Mark Shannon Normalization of gene expression data
US20050182775A1 (en) * 2003-12-01 2005-08-18 George Fitzgerald Method of storing fast throughput experimentation information in a database
ITRM20030589A1 (en) * 2003-12-22 2005-06-23 Salvatore Pappalardo EXPERT METHOD OF RESEARCH, EDITING AND EDITION OF
US20080005194A1 (en) * 2006-05-05 2008-01-03 Lockheed Martin Corporation System and method for immutably cataloging and storing electronic assets in a large scale computer system

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2000028437A1 (en) * 1998-11-06 2000-05-18 Lumen Directory protocol based data storage

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2000028437A1 (en) * 1998-11-06 2000-05-18 Lumen Directory protocol based data storage

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
BEN-BASSAT M ET AL: "A Hierarchical Modular Design for Treatment Protocols", DIALOG EMBASE, 1980, XP002913397 *
GORDON GOOD: "The LDAP Data Interchange Format (LDIF) - Technical Specification <draft-good-ldap-ldif-05.txt>", IETF DRAFT, 19 October 1999 (1999-10-19), pages 1 - 16, XP002267329, Retrieved from the Internet <URL:http://www.watersprings.org/pub/id/draft-good-ldap-ldif-05.txt> [retrieved on 20040119] *

Also Published As

Publication number Publication date
WO2001090951A2 (en) 2001-11-29
WO2001090951A9 (en) 2003-09-18
AU2001263335A1 (en) 2001-12-03

Similar Documents

Publication Publication Date Title
WO2001090951A3 (en) An internet-linked system for directory protocol based data storage, retrieval and analysis
CA2228210A1 (en) File system interface to a database
US6947953B2 (en) Internet-linked system for directory protocol based data storage, retrieval and analysis
JPH10247155A5 (en)
US20100036871A1 (en) Multi-dimensional metadata in research recordkeeping
WO2001067309A3 (en) System and method for providing access to databases via directories and other hierarchical structures and interfaces
EP1755054A3 (en) Method for intelligent browsing, storing, retrieving and indexing file structures of technical measurement data
BR0305401A (en) Managed File System Filter Model and Architecture
CN102110109A (en) Digital report topic making method and system
EP1739575A3 (en) File system having inverted hierarchical structure
EP1360614A4 (en) METHOD AND SYSTEM FOR THE SYMBOLIC INTERCONNECTION AND INTELLIGENT CATEGORIZATION OF INFORMATION
WO2003042777A3 (en) Method and system for personalized information management
Fakharaldien et al. XRecursive: An efficient method to store and query XML documents
EP0863638A3 (en) Data access method and apparatus for communications network
Orlandic Design, analysis and applications of compact zero-complete trees.
CN114627968A (en) Multi-modal omics data management system
Lyytikäinen Contextual and structural metadata in enterprise document management
Littlejohn et al. Computing for biotechnology-WebANGIS
Liu et al. Technical report interchange through synchronized OAI caches
CN101419626B (en) An Application-Oriented File System Namespace Management Method
WO1999056230A3 (en) Method and system for storing metadata in a relational database
Fakheraldien et al. An efficient middleware for storing and querying XML data in relational database management system
Seltzer et al. Pass: Provenance-aware storage systems
CN112860687A (en) Energy data preprocessing system
Zurawski How search engines organize the Web.

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A2

Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BY BZ CA CH CN CO CR CU CZ DE DK DM DZ EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG US UZ VN YU ZA ZW

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): GH GM KE LS MW MZ SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE TR BF BJ CF CG CI CM GA GN GW ML MR NE SN TD TG

121 Ep: the epo has been informed by wipo that ep was designated in this application
REG Reference to national code

Ref country code: DE

Ref legal event code: 8642

DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
122 Ep: pct application non-entry in european phase
COP Corrected version of pamphlet

Free format text: PAGES 1-60, DESCRIPTION, REPLACED BY NEW PAGES 1-77; PAGES 61-66, CLAIMS, REPLACED BY NEW PAGES 78-83; PAGES 1/5-5/5, DRAWINGS, REPLACED BY NEW PAGES 1/5-5/5; DUE TO LATE TRANSMITTAL BY THE RECEIVING OFFICE

NENP Non-entry into the national phase

Ref country code: JP