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WO2000060073A1 - Gene of irg27 polypeptide, antibody against the same and therapeutic utilization thereof - Google Patents

Gene of irg27 polypeptide, antibody against the same and therapeutic utilization thereof Download PDF

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Publication number
WO2000060073A1
WO2000060073A1 PCT/JP2000/001796 JP0001796W WO0060073A1 WO 2000060073 A1 WO2000060073 A1 WO 2000060073A1 JP 0001796 W JP0001796 W JP 0001796W WO 0060073 A1 WO0060073 A1 WO 0060073A1
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Prior art keywords
cancer
gene
seq
sequence
irg27
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Japanese (ja)
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Takashi Enjoji
Naoki Tohdoh
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Sumitomo Pharma Co Ltd
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Sumitomo Pharmaceuticals Co Ltd
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes

Definitions

  • the present invention relates to the use of a gene that evolves when P53 force, which is a tumor suppressor, is inactivated, or an antibody against a polypeptide encoded by the gene, for cancer diagnosis.
  • P53 force which is a tumor suppressor
  • the expression of P53 is induced by inactivation of P53, and esophageal esophagus cancer, stomach cancer, lung cancer, kidney cancer, thyroid cancer, parotid gland cancer, ureteral cancer, bladder cancer, uterine cancer, liver cancer, breast cancer
  • IRG27 which is expressed in various human cancers such as ovarian cancer and fallopian tube cancer, and a novel cancer using the antibody against IRG27. Diagnostic agents and diagnostic methods. Background art
  • the object of the present invention is to provide a diagnostic agent for cancer and a method for diagnosing cancer, using a gene whose expression is increased upon inactivation by force or an antibody against a polypeptide encoded by the gene.
  • the expression power is induced by inactivation of the present invention 53, and Eating m, stomach cancer, lung cancer, ⁇ cancer, 3 ⁇ 4 »3 ⁇ 4, parotid, ureteral cancer, bladder cancer, uterine cancer, liver cancer, breast cancer, sickle, fallopian tube, etc.
  • An object of the present invention is to provide a novel diagnostic agent for cancer, a method for diagnosing cancer, and the like using a gene encoding a polypeptide designated as No. 27 and an antibody against IRG27.
  • the present inventors have considered using P53, which is a tumor suppressor gene product, for the development of a novel cancer diagnostic technique (tumor marker 1).
  • P53 gene The gene with the highest mutation level in a variety of human cancers.
  • the wild-type p53 gene was cloned and its function was confirmed.
  • wild-type p53 suppressed transformation (carcinogenesis), and the introduction of wild-type p53 resulted in tumorigenicity.
  • it is defined as a gene that has been deleted or inactivated in cancer cells, and the normal gene has the function of returning cancer cells to normal cells. It was found to be one of the “genes” (protein nucleic acid enzyme, 35: 54-55, 1990).
  • abnormalities are found in about 50% of cancers of all tissues, including liver and bladder cancers, and abnormalities in the p53 gene Is widely known to be deeply involved in the development and progression of cancer (Murakami I, eta 1., Am. J. Respirr. Crit. Carre. Med., 154, 1117-1123, 1996, Kang MS, eta 1., Int. J. Cancer, 67, 898-902, 1996, Uchida T, eta 1., J. Urol., 153, 1097-1104, 1995).
  • the p53 gene occurs more frequently during the carcinogenesis process before the cancer eradicates.
  • the present inventors have found high MJ3 ⁇ 4 gene abnormalities in such various cancers Focusing on P53, we examined factors that increase in expression due to p53 gene abnormality (p53 inactivation). That is, as a result of selecting genes that are specifically expressed in the fibril trait ⁇ ffl cells in which P53 was inactivated, we succeeded in obtaining a plurality of genes, and of these genes, IRG 27 (imm ortaliz at i It was found that the gene of the factor named on rel at edgene 27) was evolved along with inactivation of p53 and was elevated ⁇ in each S cell.
  • the present inventors obtained the finding that 17 of the 24 cancer patients (approximately 70%) showed that the IRG27 gene was elevated in the tumor part compared to the non-tumor part, and We found that it can be used for diagnosis of various cancers. Furthermore, the present inventors have prepared an antibody corresponding to the IRG27 polypeptide, and have shown that an antibody against the IRG27 polypeptide is also effective for cancer diagnosis.
  • the RG27 gene had high homology (98.1%) with the ISG20 gene whose expression was induced by interferon. It has been reported that it co-localizes with n SG 1 ear body along with I SG2C PM L and SP 100, but its function is unknown (Gongo ra C, eta 1., J. ⁇ i ⁇ 1. Chem , 272, 19457- 19463, 1997).
  • ISG20 from ⁇ BD audi ⁇ ⁇ IRG27 derived from human peripheral blood because it is a protein with two amino acid residues deleted compared to IRG27 from human peripheral blood leukocytes
  • the nucleotide sequences of the three clones encoding were cloned, and no amino acid sequence deletion was found in any of the clones.
  • mouse IRG27 had the same number of amino acid residues as human IRG27, IRG27 derived from human peripheral blood leukocytes had the original amino acid sequence, ISG20 obtained from Daudi cells was thought to have an amino acid sequence unique to Daudi cells.
  • HEM45 Pent ecost BT, J. Steroid Biochem. l. Biol., 64, 25-33, 1998.
  • ISO 20 and HEM 45 the relationship between the ISO 20 and HEM 45 was not known at all. That is, it has not been clarified that the expression is induced by the inactivation of P53 and that it is useful for diagnosis of various cancers.
  • the present invention has been completed based on the above findings.
  • (c) contains the nucleotide sequence of any one of SEQ ID NO: 14 to SEQ ID NO: 29
  • A or a diagnostic agent for cancer, comprising the target of these DNAs as the active ingredient.
  • SEQ ID NO: 3 to SEQ ID NO: 5 consisting of a sequence consisting of at least M 17 bases of the positive and reverse chains of the gene consisting of the base sequence described in the sequence or the allele mutant gene thereof
  • a diagnostic agent for cancer comprising strand or double-stranded DNA, or the labeling of these DNAs as an active ingredient.
  • a diagnostic agent for cancer comprising the antibody, antibody fragment, or derivative thereof according to any of (8) to (10) as an active ingredient.
  • the diagnostic agent for cancer according to any one of (1) to (7) or (11) is used.
  • a method of diagnosing cancer is used.
  • DNA which is an active ingredient of a diagnostic agent for cancer in the present invention, is expressed by (a) inactivation of tumor suppressor P53, and (b) cancer compared to normal thread.
  • (a) a gene whose expression is induced by inactivation of the tumor suppressor p53 can be isolated, for example, by a method including the following steps A to E.
  • the mutant or deleted p53 gene used in the above step A is a normal p53 gene (Mol.Cell.Biol., 7, p961 (1987), Japanese Cancer Research Resources Bank, Depo sit No.C0104). And the following mutations or deletions. That is, mutations from arginine at position 175 to histidine, mutations from arginine at position 248 to tryptophan, or mutations from arginine at position 273 to histidine, which are mutations found in high ⁇ TO in human cancers ( The mutant P53 gene can be obtained by applying Lasky T. et a 1., Environ. Health Perspect., 104, 1324-1331 (1996)) or the like at the gene level.
  • the portion other than amino acid residues 302 to 393 (Mol. Cell. Biol., 12, p5 581-5592 (1992)), which is a region involved in the polymerization (tetramer formation) of p53,
  • the mutant p53 gene By deleting at the gene level, the above-mentioned deleted p53 gene can be obtained.
  • the normal type p53 gene Japanese Cancer Research Resources Bank, Deposit No. C0104
  • the 5 'side was set so that the mutation would enter the target site.
  • the primer and the 3 '* 3 ⁇ 4 ⁇ "primer of the normal P53 gene, and the 3'-side primer and the 5'-end primer of the normal p53 gene which were designed to introduce mutations into the target site, respectively PCR reaction, and then, to ligate the amplified fragments on the 5 'and 3' sides, mix both fragments, and perform PCR using primers on the 5 'and 3' sides of the normal P53 gene. Re-amplification to obtain the desired mutant p53 gene.
  • acquisition of a deletion type p53 gene for example, a primer for amplifying the 302nd to 393rd positions of ⁇ 53 may be prepared and amplified by a PCR reaction according to a conventional method.
  • Variant or deletion type P 5 3 gene mutant P 5 3 gene and the deletion type obtained in order to obtain a transformant 3 ⁇ 4 ⁇ ⁇ 3 ⁇ 4 ⁇ vesicles were expressed transliteration p 5 in Step A 3 gene p CAG GS (Gene, 108, P 193-200 ( 1991)) was inserted into a mammalian expression base Kuta one such building a ⁇ example onset expression vector, which was introduced into human normal cultured cells, and culture may be When PCAGGS is used as an expression vector, a blasticidin S resistance gene (bsr) may be introduced in advance in order to reduce the size of the transformed cells by adding a drug.
  • bsr blasticidin S resistance gene
  • the human normal cultured cells to be used may be any human normal cultured cells, but examples include human normal lung double blast cell line, HEL 299 (Dainippon Pharmaceutical).
  • Phosphoric acid co-precipitation method, ribosome DNA molecules can be introduced using standard methods (ribosome method, lipofectin method, lipofectamine method, HV J-ribosome method), electrophoresis method, microinjection method, etc.
  • Sffl vesicles i, for example, can be selected by adding a drug such as 2 g ⁇ 1 of blasticidin S).
  • a transformed cell overexpressing the mutant or deleted P53 gene By culturing the transformed MB vesicles prepared as described above, a transformed cell overexpressing the mutant or deleted P53 gene can be obtained.
  • p53 is known to function by forming a tetramer
  • normal tetramerization is achieved by expressing mutant or deleted P53 in f! j in the transformed vesicle. Inhibition of body formation and consequent inactivation of normal p53 function. Inactivation of p53 function maintains cell division compared to control transformed cells into which only one vector has been introduced.
  • Preparation of total RNA contained in step B It may be performed according to a conventional method.
  • RNA degrading cells by exposing cells in the presence of a surfactant such as SDS, NP-40, Triton-X100, or phenol.
  • a surfactant such as SDS, NP-40, Triton-X100, or phenol.
  • cells are disrupted by a physical method such as a homogenizer and the cells are crushed with guanidine thiosinate, and then the total RNA is denatured with a cesium chloride density gradient.
  • the phenolic thigh (Oki Gua) Total RNA can be prepared by the diphenyl thiocyanate monophenol chromatography method).
  • RT kits such as RNAmap kit (GenHunter) were used.
  • the amplified fragment is labeled with [a- 35 S] d ATP, and subjected to 6% denaturing polyacrylamide gel electrophoresis. After electrophoresis, the gel is evaporated to dryness, and P53-inactivated bffl cells (mutated or deleted P53) are compared to normal P53-transformed cells (cells into which only the vector has been introduced).
  • the DNA fragment After detecting DNA whose expression has been increased in the transfected cells, that is, DNA corresponding to the target p53 inactivation-specific gene, the DNA fragment is recovered from the gel. Then, after re-amplification using PCR again, the PCR fragments are collected, introduced into a PCR clone vector such as pT7Blue (R) T (Novagen), and the nucleotide sequence is determined according to a conventional method. I do. In this manner, a DNA fragment of a gene that is specifically expressed by inactivating P53 can be obtained.
  • pT7Blue (R) T Novagen
  • Step D This is for confirming the expression of the DNA selected in Step C.
  • an appropriate primer portion was set based on the salt of the clone obtained, and the total RNA of the normal (mutated vector), mutant and deleted p53 gene-transformed cells was determined.
  • a method of labeling the DNA fragment in the presence of [a- 32 P] dCTP or labeling the DNA fragment with a primer labeled at the end of the primer to detect the DNA fragment amplified to It is simple and convenient.
  • the amplification frequency set in this way is preferably 16 to 22 times $.
  • step E After cloning of the full-length cDNA (gene) in step E, the expression in each human MffiM was examined. Using a DNA fragment as a probe, The full-length cDNA can be cloned. Preparation of a cDNA library (Use a commercially available cDNA synthesis kit to convert the mRNA from the origin into type I. A human tissue-derived cDNA library (use a commercially available cDNA library) Is also possible.
  • the gene of the present invention together with the ⁇ of the above (a), a force which also has the characteristic of “(b) an increase in expression s ′ in cancer fibers compared to normal fibers” m E.
  • RNA prepared from tumors 5 and non-tumor of the same patient for example, Hum an Tumor Panel B lots of In Vitrogen, etc.
  • RNA prepared from the same fiber of a patient and a healthy person by performing a lino-san blot analysis using a conventional method.
  • the DNA comprising at least a continuous sequence of at least 17 bases of the gene obtained as described above is the ⁇ DNA '' of the present invention, which is an active ingredient of a diagnostic agent for cancer, and the mRNA of the fia fi gene is As long as its presence can be specifically detected, it may be single-stranded or double-stranded, and may be any length of DNA at any position in the gene. Further, the DNA may be labeled such that the single-stranded or double-stranded DNA can be diagnosed. Regarding what kind of DNA can specifically detect the presence of the corresponding mRNA of the pre-S gene, it can be easily performed by actually performing the PCR method and the hybridization method as described below. You can judge it.
  • At least 17 bases is stochastically based on the fact that at least 17 bases are sufficient to identify one gene. If such a DNA is short, it can be synthesized using a DNA synthesizer, if it is long, it can be prepared by PCR, or ii if there is an appropriate restriction enzyme site, it can be prepared using S. it can.
  • DNA of the present invention include the genes having the above-mentioned difficulties (a) and (b) and containing the base sequence described in any of the following: Single-stranded or double-stranded DNA consisting of at least 17 nucleotides of reverse strand, or Is the value of these characteristics.
  • the nucleotide sequences described in SEQ ID NOs: 14 to 29 are nucleotide sequences corresponding to a part of the novel gene obtained by the above A to E.
  • a gene containing the nucleotide sequence of any one of SEQ ID NOs: 14 to 29 can be cloned according to the method described in A to E in the above-mentioned H.
  • SEQ ID NO: 14 to SEQ ID NO: 29 By using an appropriate part of the DNA as a hybridization probe based on the body of the salt, and screening a cDNA library derived from a cell that expresses the DNA well. I can get it. The specific method at that time can be performed by referring to a basic book such as ⁇ Molecular Cloning 2nd Edt., Cold Spring Harbor Laboratory Press (1989).
  • a single strand or a single strand capable of specifically detecting the corresponding mRNA of the IRG27 gene consisting of SEQ ID NO: 3 to SEQ ID NO: 5 examples include double-stranded DNA, or ⁇ ⁇ 'of these DNAs. More specifically (a single-stranded or double-stranded DNA consisting of at least the 17-base sequence of the IRG27 gene, or a target I ⁇ thereof.
  • SEQ ID NOs: 3 and 4 The nucleotide sequence of the human IRG27 gene, which has the same nucleotide sequence except that both nucleotide sequences in the untranslated region are partially different from those of the human IRG27 gene.
  • nucleotide sequences of the mouse IRG27 gene These are the nucleotide sequences of the mouse IRG27 gene These genes can be obtained by the methods described in the above-mentioned steps A to E. Also, an appropriate probe is prepared based on the sequence information of SEQ ID NOS: 3 to 5, for example, from leukocytes. Cloning can also be achieved by screening the cDNA library of IRG27. In addition, the IRG27 gene can be cloned from the known HEM45 gene (accession No. U88964; Pent ecost BT, J. Steroid). Bio chem. Mo l. Bio l., 64, 25-33, 1998) and the same sequence (SEQ ID NO: 3 at positions 522 and 711). I can create the gene for IRG27.
  • allelic variants or genetic polymorphisms may exist in the IRG27 gene described in SEQ ID NO: 3 to SEQ ID NO: 5, and inheritance of the allelic variants or genetic polymorphisms is also possible.
  • DNA consisting of at least a 17-strand assassin and its indicator can also be used as an active ingredient in cancer diagnostics.
  • the DNA of the present invention is used as a probe for the reaction of PCR or a primer for the reaction of PCR for diagnosing cancer.
  • a preferred length is from 17 bases to 50 salts Sgj3 ⁇ 4.
  • a preferred length of ⁇ used as a probe for hybridization is a length S of 50 to 500 bases.
  • PCR primers include a set of PCR primers derived from the IRG27 gene described in ⁇ , ⁇ or C below, or a set of primers consisting of a sequence of at least 17 bases or more of these primers. No.
  • the DNA of the present invention By dissolving the DNA of the present invention in an appropriate buffer that does not hinder the reaction, it can be used as an active ingredient of a diagnostic agent for cancer.
  • a diagnostic agent for cancer for example, it is Rikikawa no to use in the form of a kit that also contains transcriptase, Taq polymerase, dNTP, reaction stop solution, etc.
  • Methods for diagnosing cancer using the diagnostic agent include the following methods.
  • the diagnostic method of the above 1) and 2) can be performed based on a basic book such as ( ⁇ Molecular Cloning 2nd Edt., Cold Spring Harbor Laboratory Press (1989)).
  • the primer DNA of the present invention is synthesized by a conventional method, and this is used as a diagnostic agent.
  • total RNA or poly (A) RNA is prepared from 3 ⁇ 4JM cells, blood, urine, etc. by the method described above, and this is used as type ⁇ . Is prepared.
  • the preparation of the single-stranded cDNA can be easily performed by using, for example, ⁇ Superscript pre-Sir 1 cation system (Life Technologies, Gaithersburg, MD). After that, the primer is added and the PCR reaction is carried out in the usual manner.
  • the PCR reaction conditions include, for example, 30 cycles of 95 ° C for 1 minute, 60 ° C for 1 minute, and 72 ° C for 2 minutes, followed by heating at 72 ° C for 10 minutes. Is electrophoresed on a suitable agarose gel to detect the presence or absence of the expression of mRNA of IRG27.
  • a measurement method based on the following principle, which is frequently used in clinical diagnosis, is based on the PCR method.
  • RNA is extracted and purified from blood or the like in the same manner as described above, and amplification (PCR reaction) of the target sample using the biotinylated primer is performed in the same manner as described above. Thereafter, the re-amplification product is unified with an alkaline solution and hybridized with the solid phase on which the complementary DNA probe is immobilized. After that, the solid phase is washed and reacted with enzyme-labeled avidin. After washing the solid phase, the enzyme substrate is added to perform a color reaction, and the absorbance is measured to detect the presence or absence of IRG27 mRNA.
  • PCR reaction PCR reaction
  • the ability to make a diagnosis is also possible by using the in situ PCR method (Fernandez et al., Mol. Carcinog, 20, 317-326, 1997).
  • the diagnosis by Northern plot of 2 for example, the following method can be used.
  • the single-stranded or double-stranded DNA of the present invention is labeled; Prepare and use this as a diagnostic reagent Double-stranded DNA, for example, 32 P-labeled PCR reaction product prepared by the method described in 1) above, using the nick translation method or the random prime labeling method.
  • total RNA or poly (A) RNA is prepared from the subject's fibrous cells, blood, urine, etc.
  • RNA chip Furthermore, diagnosis using a DNA chip is also possible. That is, first, the DNA of the present invention is synthesized on a DNA chip. Next, total RNA or (poly (A) RNA is prepared from fiber cells, blood, urine, etc. for fiber, and this is labeled with fluorescence or the like. It is possible to diagnose cancer by detecting the fluorescence of DNA, etc.
  • the DNA chip to which the DNA or polynucleotide of the present invention is bound can be obtained by ordering from Affymetrix in the United States. It is possible, and individual specific means of the above-mentioned diagnostic method can be performed with reference to Nature Genetics, 21, 1-60 (1999) and the like.
  • the present invention is applied not only to detection and diagnosis using the primers and the probe, but also to tissue tissue hybridazion of tissue.
  • the solid DNA is derived from a gene induced by inactivation of p53.
  • DNA derived from a gene regulated by inactivation of P53 is also a similar cancer. It can be used as a diagnostic agent for
  • the genes whose expression is controlled by the inactivation of p53 are exactly the same except that the gene whose expression is specifically controlled by the inactivation of p53 is detected in the differential display in the step C. By going through steps A to E, it is possible to “close”.
  • the partial sequence of the novel gene thus found is shown in SEQ ID NO: 30 to SEQ ID NO: 1.
  • SEQ ID NO: 14 to SEQ ID NO: 29 disclosed herein are a group of DNAs whose expression is induced by inactivation of p53
  • SEQ ID NO: 30 to SEQ ID NO: 4. 1 is a group of DNAs whose expression is regulated by inactivation of p53.
  • the antibody specifically recognizes the antibody and the polypeptide encoded by the above-described gene of the present invention (hereinafter, sometimes referred to as the polypeptide of the present invention). That is, (a) expression is induced by inactivation of the tumor suppressor p53, and (b) the expression is increased in cancer S compared to normal.
  • An antibody that specifically recognizes a polypeptide is Specifically, an antibody capable of specifically recognizing a polypeptide encoded by a gene containing the nucleotide sequence described in any one of SEQ ID NO: 14 to NO: 29 is more preferable.
  • SEQ ID NO: 1 Antibodies specifically recognizing human IRG27 comprising the amino acid sequence described, mouse IRG27 comprising the amino acid sequence represented by SEQ ID NO: 2, or an allelic variant thereof.
  • antibodies can be easily prepared by the method described in, for example, Antibodies; A Laboratory Manual, Lane, HD et al., Cold Spring Harbor Laboratory Press (1989), New Cell Engineering ⁇ Protocol, Shujunsha (1993), etc. Produced. That is, the antibody of the present invention can be produced by appropriately immunizing an animal by a conventional method using the polypeptide of the present invention or a part thereof as an immunogen.
  • the immunogen (A) the polypeptide of the present invention, (B) a fusion protein of the polypeptide with GST, etc., (C) a conjugate of an oligopeptide comprising a part of the polypeptide with KLH, etc. I can do it.
  • the polypeptide of the present invention (A) is inserted into an appropriate expression vector, and the gene of the present invention is inserted into Escherichia coli or (Ono-cultured cell line).
  • the polypeptide can be obtained by preparing and purifying the polypeptide in large quantities, and the fusion protein of the above (B), for example, the gene of the invention of the present invention can be added to a GST fusion protein expression vector such as pGEX-6P-1 (Pharmacia). This is introduced into Escherichia coli to obtain a transformant, followed by disruption of the cells by a conventional method, extraction of the fusion protein, and purification by daltathione Sepharose 4B (Pharmacia) or the like.
  • pGEX-6P-1 Pharmacia
  • the conjugate of the above (C) can be obtained by mixing with oligoprotein after synthesis of the oligopeptide: ⁇ Specific examples of the conjugate in RG27 IRG27-A consisting of the portion from position 104 to position 127 of the amino acid sequence described in SEQ ID NO: 1, I RG27-B consisting of the portion from position 131 to position 153, from the portion from position 159 to position 181 Each of the following I RG27-C is conjugated to KLH.
  • the animal species to be immunized may be a rabbit, a mouse, a rat, a chicken, a rabbit, a donkey, a hidge, a rabbit, or a polyclonal antibody if the antibody specifically recognizes the polypeptide.
  • any of monoclonal antibodies may be used.
  • Specific examples of the Nada body include an antibody corresponding to I RG 27-C comprising the portion of the amino acid sequence of human I RG 27 shown in SEQ ID NO: 1 from position 159 to position 181.
  • Various antibody fragments can also be prepared based on the antibodies obtained as described above.
  • the body fragments such Yotsute pepsin digestion ⁇ of ⁇ Ru F (ab ') antibody 2 fragments, F (ab') 2 Fab 'fragments which can be ⁇ by reducing the disulfide bonds of the fragment, and
  • the use of papain and a reducing agent to transform antibodies into 2K Fab and iiFab fragments, which are humiliated, is also included in the scope of the present invention.
  • antibodies can be prepared based on these antibodies or antibody fragments.
  • the invitations ⁇ for example, chimeric antibodies, humanized antibodies, l-body
  • it can be prepared according to the method described in JP-A-6500 / 47, Nature, 522 (1986).
  • the antecedent or the dead fragment is labeled with an enzyme or the like.
  • Specific enzyme labeling methods include, for example, the daltaraldehyde method, the perioso method, the maleimide method, and the pyridyl disulfide.
  • Enzymes used for labeling include, for example, small intestine-alkaline phosphatase, horseradish peroxidase, etc.
  • the antibody, the antibody fragment, and the derivative thereof of the present invention can be used as a diagnostic agent for cancer.
  • the antibody or the like of the present invention can be used as an active ingredient of a cancer diagnostic agent by allowing the antibody or the like of the present invention to be present in an appropriate medium such as serum albumin-containing phosphorus solution (PH7.0) at night. .
  • PH7.0 serum albumin-containing phosphorus solution
  • it can be used in the form of a kit containing, for example, a brush-labeled secondary antibody, a color former, a color former, a stop solution, a standard product, and the like.
  • Examples of a method for performing an immunological diagnosis using the diagnostic agent of the present invention include, for example, solid-state fiber.
  • a method for detecting the presence of the polypeptide of the present invention in cells a bodily fluid containing blood or saliva or in other words, a method for detecting the presence of the polypeptide of the present invention can be mentioned, that is, cytotoxic T cells (CTLs) are induced in the body against human cancer cells, and the CTL cells are damaged, resulting in cancer. Since the polypeptide of the present invention, which is specifically expressed in cells, is released into the blood or urine, the polypeptide can be detected in blood, saliva or urine.
  • CTLs cytotoxic T cells
  • Specific detection methods include fluorescent # 3 ⁇ 4, Western 'plot, immunoprecipitation, Immunoassay (RIA), Lin immunoassay (ELI SA), etc. No.
  • normal ELISA or RIA imaging at the operative night including blood or saliva or at the age at which the polypeptide contained in urine is detected is also convenient. All of these diagnoses can be easily performed based on basic books such as enzyme immunoassays and the Medical School (1978).
  • the ELISA method it is simple and convenient to coat the plate with a primary antibody, bind the IRG27 present in the sample, and react with the two isotopes to detect the antibody bound to the IRG27.
  • anti-I RG27A IgG an antibody described in the I RG27-A portion
  • anti-I RG27B IgG an antibody against the I RG27-B portion
  • biotin kMl RG27C IgG an antibody that binds to the IRG27-C moiety
  • peroxidase-labeled streptavidin followed by a color reaction.
  • the same detection can be performed by using the anti-IRG27C IgG directly labeled with enzyme such as peroxidase or alkaline phosphatase.
  • FIG. 1 Figure HEL 299 cells (VECTOR in the figure) transfected with the vector alone, and HEL 299 cells (175H, 175H in the figure) transfected with the three mutant p53 and deletion p53 plasmids prepared in Example 1. 248W, 273H and 302-393) are electrophoretic photographs showing the results of differential display. Arrow band Corresponds to fragment 27.
  • FIG. 2 is an electrophoresis photograph showing the results of RT-PCR detecting the expression of the IRG27 gene in a vector-transfected cell and three types of mutant p53- and deletion-type p53 plasmid-transfected cells.
  • the lower part of the figure shows the results of a similar experiment using G3PDH as a control. IRG27 was subjected to electrophoresis of 22 cycles of the PCR product and G3PDH was subjected to 20 cycles of the PCR product.
  • FIG. 3 is an electrophoretic photograph showing the result of Northern blotting of the expression of the IRG27 gene in normal human fibers.
  • the RNA plots for a, b, and c were obtained using a: Human, b: Human II, and c: Human Immune System of MuOnti eT issue Nort B rn B lot of C ontech, respectively. Used. The arrow indicates the position of the signal of IRG27.
  • FIG. 4 is an electrophoresis photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in each human cell line.
  • Human Cancell e Cell Line of Mu 1 tip 1 e Tis ssue No r the rn B l o t of C 1 o n t e ch was used.
  • HL60 is a pro-IS leukemia cell line
  • He La is a cervical carcinoma cell line
  • K562 is a chronic medullary leukemia cell line
  • MOLT 4 acute lymphoblastic leukemia cell line is an electrophoresis photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in each human cell line.
  • Raj i a one-kit lymphoma cell line, SW480; a cell line, an A 549 glutamic carcinoma cell line, and G 361 a malignant melanoma cell line.
  • the arrow indicates the position of the signal of IRG27.
  • FIG. 5 is an electrophoretic photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in the tumor part (T in the figure) and non-tumor part (N in the figure) of the cancer patient. Threads are shown on each lane.
  • FIG. 6 is an electrophoretic photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in the tumor part (T in the figure) and the non-tumor part (N in the figure) of four cases of lung cancer patients.
  • FIG. 7 is an electrophoretic photograph showing the result of Western blot analysis using an anti-I RG27 antibody. Electrolyzed sample DLD-1 cell lysate of stable transformed cells in which an IRG27 expression vector was introduced into cells (IRG27 lane in the figure) This is a cell lysate of a stable transformed ⁇ ffl cell transfected with only a vector (vector lane in the figure).
  • anti-IRG27 antibodies three kinds of anti-IRG27 antibodies (A-2, B-2, C-2) before affinity purification and after affinity purification were used.
  • Fig. 8 is an electrophoresis photograph showing the results of Northern blotting and estamplotting of the expression of mRNA and protein of IRG27 in various human cell lines.
  • Coomassie protein used for Western plotting The results of staining with Priluent Blue are also shown at the bottom of the figure, where HEL299 and * WI38 are normal lung 2-fold # »blast cells and HepG2 is a liver cancer cell line.
  • 293 is a fetal kidney-derived plasma carcinoma cell line
  • He La is a cervical carcinoma cell line
  • Saos-2 is an osteosarcoma Mffl vesicle line
  • U937 (! ⁇ Lymphoma).
  • Cell line, RD myofioma cell line, T24 bladder cancer cell line, ScaBER is bladder cancer cell line
  • DLD-1 is a general cell line
  • Raj i a kitlin follicular cell line
  • K U- 2 is a renal cancer cell lines.
  • FIG. 9 is a graph showing detection of IRG27 by the ELISA method using an anti-IRG27 antibody.
  • the abscissa indicates the values of the GST-fused IRG27 protein as an antigen and the control GST protein, and the ordinate indicates the absorbance.
  • the measured values when the detection antibody of 1 mg / m1 was used only for the GST protein are shown.
  • pro Sp 53 containing a 1.9 Kb normal p53 cDNA gene (provided by Dr. Kiyomitsu Nemoto, Shizuoka Prefectural University; generally, D-marked osit No. from Japanese Cancer Research Resources Bank) (Available as CO 104) or pBS-p53 in which the gene contained in the EcoRlZBamHI cut fragment in the plasmid was introduced into pBuescriptII-SK (+) (Stratagene).
  • PCR was performed to amplify the DNA fragments in the 5 'H region and the 3' region of p53.
  • DNA fragments of the desired length were purified by agarose electrophoresis. PCR was performed by a conventional method using the obtained two types of DNA fragments, the p53Xho primer and the p53term primer.
  • the amplified DNA fragment was subjected to 1% agarose Geso HI electrophoresis, and a DNA fragment of a desired length was recovered, cut with XhoI, and introduced into pB1uescript II SK (+). 248th and 27th
  • the p53 gene fragment having a mutation at the amino acid at position 3 was also introduced into pB1uescript II SK (+) using the corresponding primer in the same manner as described above.
  • the normal P53 cDNA was also amplified using primers (p53te rm and p53Xho, respectively) with XhoI cleavage sequences added to the 3 'and 5' sides of the open reading frame, and And introduced it into pB 1 ue script II SK (+).
  • the DNA of the clone mutated at position 175 had a deletion of about 200 bp at the 5 'side, and the mutation potential at positions 248 and 273 was i.
  • the DNA of the clone containing the DNA had a deletion of 29 bp each on the 5 'side. Therefore, the 5′-side region of the normal P53 gene was ligated using the NcoI cleavage site contained in the p53 gene to obtain each mutant P53 gene of interest.
  • a deleted p53 gene consisting only of the p53 domain (nuclear translocation, tetramer formation, non-specific single-stranded DNA binding domain) is also produced.
  • a primer pMINI: GTT AAC TCG AGC CAC CAT GGG GAG CAC TAA GCG AGC ACT GCC CM C CA
  • PCR was performed using the 3 ′ primer (p53terra) of the open reading frame of the normal p53 gene.
  • the pB1uescript II recombinant vector containing the mutant P53 DNA and the pCAGGS thread male vector containing the deleted P53 DNA obtained as described above are cut at X1101 to cut the insert DNA. separated. Insert these insert DNAs into Pvu II—EcoR I DNA fragment containing the blasticidin S resistance gene (bsr) expression unit of p SV2 — bsr (Health Pharmaceutical Co., Ltd.) into S a 1 I in a pCAGGS vector Each was introduced into the XhoI site of the inserted pCAGGS-bsr. In the clones obtained, 175 amino acid residues were mutated from arginine to histidine.
  • Three mutant p53 plasmids (pCAGGS-bsr-175H, pCAGGS-bsr-248W, pCAGGS-bsr-273H) and deletion p53 plasmid (pCAGGS-bsr-p53-302-393), respectively 2.2 ⁇ 10 6 human normal lung 2 ⁇ ⁇ «
  • the application conditions were 300 V, 0.75 kV / cm, a pulse width of 1000 ⁇ s, the number of pulses was 6 times, and a culture solution containing 2 ⁇ g / m 1 blasticidin S 24 hours later was selected. After 5 days from the start of selection, surviving transformed cells were collected. As a control, similar cells into which vector-1 (pCAG GS-b sr) was introduced were also prepared.
  • the recovered transformed cells 0. 5% NP- 40, 1 OmM T ris- HC 1 (pH8. 6), 14 OmM NaC l, Karoe a 1. 5mM MgG l 2, 1000UZ ml RNa sei nh ibitor the re supernatant by the suspension after centrifugation was collected, equal amounts of 0. 2M T ris -HC 1 (P H7. 5), 2% SDS, 25mM EDT a, 0. 3M NaC l, 200 ⁇ g / m 1 Proteinase K was added, and the mixture was heated at 37 ° C. for 30 minutes. After adding and extracting an equal amount of phenol: chloroform: isoamyl alcohol (25: 24: 1), total RNA was recovered with ethanol-5 and used in the following procedure. Imperial example 3
  • RNA derived from the transformed cells obtained in Example 2 according to the protocol of RNAmapkits A to D from GenHunter.
  • the RT reaction was carried out using the ⁇ type.
  • PCR was performed using a total of 80 primer sets.
  • PCR reaction Using GeneAmp PCR system 9600 manufactured by Perkin E 1mer, 94 ° Cx 20 sec -48 ° Cx 1 min-72 ° Cx 30 sec 10 cycles, 94 ° Cx 20 sec- 35 cycles of 40 ° C 1 min-72 ° C x 30 sec were performed, heated at 72 ° C for 5 min, and then cooled to 4 ° C.
  • PCR solution subjected to the thermal MS was electrophoresed on a 6% sequence denaturing gel (Long Ranger 6% premix gel; FMC). After drying by JE, X-ray film (Bio Max MR; Kodak) was Exposure for ⁇ 3 days.
  • Figure 1 shows the results of autoradiography. In addition to DNA fragments that appear specifically in P53-inactivated cells, we also searched for DNA fragments whose expression decreased with p53 inactivation, and matched the target band in the autoradiogram. The dried gel portion was cut out. Table 1 shows the strength of expression of each selected DNA fragment in each medullary cell.
  • Each excised gel portion was immersed in 100 1 water for 10 minutes, heated at 100 ° C for 15 minutes, centrifuged, and 50 g of daricogen was added to the supernatant, and the amplification product was recovered with ethanol.
  • the recovered DNA solution re-amplify by PCR, purify the DNA fragment in a SUPREC-02P Gongai 3 ⁇ 4 centrifuge tube (Takara), and use the plasmid vector pT7B1ue (R) (Nov age n ).
  • the nucleotide sequence of the clone group containing the obtained 64 types of fragments was determined, and a homology search was performed using a GenBank ZEMBL gene database (DNAS IS CD-ROM 033; Hitachi Software Engineering Co., Ltd.). Various new or known genes have been identified. Table 2 summarizes the results. “Nove 1” in the table corresponds to a novel gene. Among these novel genes, the nucleotide sequence of DNA that appears specifically in P53-inactivated cells is shown in SEQ ID NOS: 14 to 29, and the nucleotide sequence of DNA that decreases with p53 inactivation is shown in SEQ ID NO: : 30 to SEQ ID NO: 41.
  • p21 WAF-1 is derived from p53 by the expression level of the gene by% 1.
  • the differential display used in the present invention was determined to be suitable for unraveling genes whose expression increases or decreases due to inactivation of P53.
  • RNA as type II RT-PCR was performed.
  • the 5 'end of the primer was labeled with 32 P, and the number of amplification cycles was changed to 16, 18, 20, and 22 times.
  • electrophoresis of the PCR solution and measurement of the signal intensity of the amplified DNA fragment it was shown that the DNA fragment of G3PDH was microamplified in any of the transformed cells in 16 to 22 cycles. It was confirmed that the total RNA samples used for RT-PCR were almost equivalent.
  • the DNA sequence corresponding to fragment 27 was found from the EST database (accession on No. AA 150500 and accession on No. AA 1567 04), and the primers that can specifically detect the gene corresponding to fragment 27 were used. The primary sequence was selected and the same RT-PCR was performed. When the number of cycles was increased from 18 to 22, the logarithmic amplification was shown. The primer used (see below).
  • Northern blotting was carried out by a conventional method using a filter from which RNA derived from each cell and cells was blotted and purchased from C1onetech.
  • Figure 3 shows the results of examining the expression in various human normal threads. Strong expression and expression of IRG27 were observed in lymphoid fibers such as peripheral blood leukocytes, spleen, and thymus. Fibers other than the lymphoid fiber were relatively strong in the small intestine, but this may be due to the small intestine's ability to possess its own immune fibers (lymphocytes). In normal humans except for the above-mentioned threadwork, IRG27 was not expressed, or even if it was expressed, the expression was extremely low. The size of the mRNA was 0.9 Kb, and transcripts of 1.8 Kb, 3 Kb, and 4.5 Kb were detected, though weakly.
  • Fig. 4 shows the results of examining the expression in various human cancer cell lines. Expression was observed in most of the cancer cell lines examined. In particular, high frequency expression was observed in a lymphoma-derived cell line (Raj i), and strong expression was also observed in a large cell line (SW480) and a cervical lining cell line (HeLa). Furthermore, the expression was high in the fetal liver thread, but extremely low in the adult liver (Fig. 3). This means that the IRG27 gene This suggests that, like Rikiichi CE A, he is closely related to Ganji-Dani. Difficult case 6
  • IRG27 peripheral blood leukocytes. Therefore, screening of IRG27 cDNA was performed using a human leukocyte cDNA library (Gibco BRL). 2. RESULTS subjected to colony High Priestess die See Chillon using the probes prepared in Example 5 to 7x l 0 6 colonies, 8 clones by three subscription-learning is selected.
  • nucleotide sequences were determined for three clones, I RG27-3-1, I RG27-4-1, and I RG27-9-11, each having an insertion sequence of 1 Kb.
  • the open reading frame portions corresponding to the 181 amino acid residues of the three clones were identical.
  • the sequence 5 ′ upstream of the start codon of IRG27-4-1 was different from that of IRG27-3-1 and IRG27-9-1.
  • the nucleotide sequences contained in the clones I RG27-3-1 and IRG27-4-1 are shown in SEQ ID NOs: 3 and 4.
  • the amino acid sequence deduced from these nucleotide sequences is shown in SEQ ID NO: 1. It should be noted that PCR using body DNA as a type III is expected to be caused by the above-mentioned DNA sequence difference a 1 t rennativessplicnicg.
  • HEM45 is known to be upregulated by estrogen
  • ISG20 is known to be upregulated by type I and II interferon.
  • Difficult case 7 is not known that the expression is increased by inactivating ⁇ 53.
  • Partial sequence of mouse type I RG27 (ml RG27) gene Deduced from EST database, base deletion in the region corresponding to open reading frame of hI RG27, translated into amino acid sequence as is Then, the protein encoded by the mIRG27 gene becomes a polypeptide having a C-terminal deletion compared to the hIRG27 protein. Therefore, in order to clarify the amino acid sequence of the protein encoded by the mlRG27 gene, a primer was set based on the nucleotide sequence of the EST database, and a mouse spleen cDNA library (C1tech) The DNA fragment was amplified by PCR using the ⁇ as a ⁇ , and introduced into pGEM_Teasy Vector (Promega).
  • nucleotide sequence was determined by the direct method using the amplified PCR fragment, and the correct nucleotide sequence of the mlRG27c DNA gene was determined.
  • IRG27 expression was elevated in human, ovarian, and fallopian tube cancers.
  • Fig. 6 the rise of IRG27 was observed.
  • Tables 3 and 4 summarize the rise of S ⁇ in the tumor area. (In the table, the more Byeons, the greater the expression in the tumor area than in the non-tumor area. This indicates that the expression is lower in the iiffl's tumor than in the non-tumor's).
  • Table 3 corresponds to the results in Figure 5
  • Table 4 corresponds to the results in Figure 6.
  • the expression of the IRG27 gene which was cloned as a gene that increases with the inactivation of p53, was observed in tumors of ⁇ 70% 3 ⁇ 48.
  • the proportion that [rho 5 3 months mutations in cancer patients than the height (about 5 0%, Cel l, 88 , P 323-331 (1997)) was a value.
  • the renal cancer (20 cases) 2 cases liver cancer, thyroid cancer, parotid gland cancer, ureteral cancer, bladder, uterine cancer, ovarian cancer (the tendency was remarkable.
  • the frequency was 45%.
  • I RG27-A consisting of the portion at positions 104 to 127 of the amino acid sequence described in SEQ ID NO: 1
  • I RG27-B consisting of the portion at positions 131 to 153, and position 159 To 181st position of IRG27-C were synthesized.
  • the oligopeptide was conjugated to KLH, and this was used as an antigen to immunize rabbits in the usual manner. Egrets were prepared.
  • RG27 protein was recognized.
  • FIG. 7 shows the results of Western plot clarification using ⁇ -purified and purified antibodies.
  • RNA from various cells GI BCO-BRL was prepared using a Trizol kit. 20 g of total RNA is formalin-containing 1% agarose per ligation! / «Electrophoresis and transferred to NEN nylon membrane (Gene Screen P 1 us), then 1 MNaCl, 10% dextran Prehybridization was performed using 1% SDS, 50% formamide, and 100 ⁇ 6 g / ml salmon sperm DNA. Using the Nco IZS ac I fragment of IRG27 cDNA (SEQ ID NO: 3) labeled with 32 P using BcaBEST Labeling Kit from Takara as a probe, linogen hybridization was performed by a conventional method. I went to one session.
  • Washing was performed twice at room temperature for 10 minutes with 2 XSSC, twice at 60 ° C for 20 minutes with 2 XSSC and 1% SDS, and then at room temperature for 10 minutes with 0.1 x SSC and 0.1% SDS once. Detection was performed using Kodak's BI OMAX MS film.
  • Preparation of proteins from cells was performed by lysing the cells with 31.25 niM Tris-HCl (pH 6.8), 7.5% glycerol, and 2% SDS.
  • the protein iU3 ⁇ 4 was obtained using Pierce's BCA protein measurement kit. Were determined. Add 5% (V / V) 2-mercaptoethanol and 0.01% (W / V) BPB to the protein solution of No. 10, and add oat barley at 100 ° C for 5 minutes, 153 ⁇ 4SDS-polyacrylamide gel 1 / S It was subjected to electrophoresis.
  • the IRG protein used in the present invention was prepared as a fusion protein with GST as follows. That is, first, the cDNA of human I RG 27 (SEQ ID NO: 3) cloned in Example 6 was inserted into pGEX-6 ⁇ ⁇ -1 (Pharmacia) so that the reading frame matched it. A GST fusion I RG27 protein expression plasmid was prepared, and then the host E. coli JM109 (Toyobo) was transformed with the expression plasmid and cultured at 37 ° C. 1 mM IPTG was added and the cells were cultured for 1 hour * 3 ⁇ 4 and the cells were recirculated 4.
  • the cells were buffered with PBS containing ImM PMSF, 1 ⁇ g / m 1 pepstatin A, and lgZml leptin. — Suspended in E (PBS, 5mM EDTA), sonicated, and added Triton X-100 to a final concentration of 1% as a control. Glutathione Sepharose 4B (Pharmacia) was added to the supernatant, and GST-fused IRG 27 proteins were bound. The daltathione Sepharose was washed three times with PBS-E, and the GST-fused IRG27 protein was eluted with 50 mM TrisHCl (pH 8.0) buffer containing lQmM original glutathione. The purified GST fusion I RG27 protein was quantified using the Protein Assay Kit (BI ORAD).
  • the ELISA method was performed as follows.
  • the anti-I RG27 B-2 IgG prepared in Example 9 was adsorbed onto a 96-well plate, Immunoplate II (Nunc), and then the GST fusion I prepared at various concentrations prepared above. RG27 was reacted. Subsequently, the biotin bMl RG 27 C-2IgG prepared using the biotin labeling kit of Boehringer Mannheim was reacted, and peroxidase-labeled streptavidin (B10 SOURCE I NTERNAT ION AL) After the reaction, a color reaction was carried out using TMB Microcell II Perox i das e Sub strat e System (KPL). The results are shown in FIG.
  • the anti-IRG27 antibody of the present invention did not react with GST, but reacted with GST-fused IRG27 in a manner dependent on the antigen iJS and the detection antibody. From these results, the ability to perform ELISA using the anti-IRG27 antibody of the present invention became clear.
  • a human lymphoma-derived cancer cell such as Raji cell is administered to mouse J »such as C57B6, and the cancer cell is proliferated by.
  • CTL cytotoxic T cell
  • IRG27 derived from human cancer cells is released into fil and urine. Therefore, the blood and urine can be woven at any time after inoculation of the cancer cells and subjected to the ELISA method described in Example 11 above, whereby the protein of IRG27 can be detected.
  • Example 11 Perform EL ISA Significantly detect IRG27 protein in S cancer patients compared to healthy individuals, so that it is possible to select patients with cancer from among the examinees.
  • the 74th and 87th nucleotides in the nucleotide sequence of SEQ ID NO: 20 could not be determined.
  • the 24th, 34th, 45th, 65th, 66th, 70th, 73rd, 74th, 84th, 84th, and 86th positions of the nucleotide sequence described in SEQ ID NO: 21 The 89th, 109th, 114th and 123rd bases The base could not be determined.
  • the 17th, 62nd, 99th, 11th, 125th, 129th and 170th bases of the base sequence described in SEQ ID NO: 23 could not be determined.
  • the eighth, 41st and 87th amino acids in the nucleotide sequence of SEQ ID NO: 26 The base could not be determined.
  • the 63rd, 75th, 108th, 158th, 179th and 189th bases of the base sequence described in SEQ ID NO: 28 can be determined. No bases 15th, 28th, and 41st bases in the base sequence of SEQ ID NO: 30 I Bases that could not be determined.
  • Rooster No . bases described in 39. Bases No. 108, No. 157, No. 181, and No. 209 in base of rooster. These bases could not be determined. .
  • SEQ ID NO: 41 2nd 21st ⁇ S of the nucleotide sequence described in SEQ ID NO: 41 is a nucleotide that could not be determined.
  • Antibodies against the IRG27 gene of the present invention or a part thereof, or the IRG27 protein are useful for diagnosis of a wide variety of cancers.

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Abstract

Novel diagnostics for cancer, a diagnostic method, etc. with the use of a gene encoding a polypeptide called IRG27 the expression of which is induced by the inactivation of p53 and elevated in various human cancers such as esophageal cancer, stomach cancer, lung cancer, kidney cancer, thyroid cancer, parotid cancer, ureteral cancer, bladder cancer, uterus cancer, liver cancer, mammary cancer, ovarian cancer and tubal cancer, and an antibody against IRG27.

Description

明 細 書  Specification

I R G 2 7ポリペプチドに対する遺伝子、 抗体、 及びこれらの診断への利用 技術分野 Genes and antibodies to IRG27 polypeptide and their use for diagnosis

本発明 癌抑制因子である P 5 3力不活化した際に発 昇する遺伝子、 あるい は該遺伝子がコードするポリぺプチドに対する抗体の、 癌の診断への利用に関する。 具体的には、 P 5 3の不活化にょリ発現が誘導され、 力 食道癌、 胃癌、 肺癌、 腎癌、 甲状腺癌、 耳下腺癌、 尿管癌、 膀胱癌、 子宮癌、 肝癌、 乳癌、 卵巣癌、 卵管癌等の各 種ヒト癌において発現上昇力 ^認められる、 I RG 2 7と称するポリペプチドをコード する遺伝子、 及び該 I RG 2 7に る抗体を利用した、 新規な癌の診断薬及び診断 方法などに関する。 背景技術  The present invention relates to the use of a gene that evolves when P53 force, which is a tumor suppressor, is inactivated, or an antibody against a polypeptide encoded by the gene, for cancer diagnosis. Specifically, the expression of P53 is induced by inactivation of P53, and esophageal esophagus cancer, stomach cancer, lung cancer, kidney cancer, thyroid cancer, parotid gland cancer, ureteral cancer, bladder cancer, uterine cancer, liver cancer, breast cancer A gene encoding a polypeptide called IRG27, which is expressed in various human cancers such as ovarian cancer and fallopian tube cancer, and a novel cancer using the antibody against IRG27. Diagnostic agents and diagnostic methods. Background art

従来、 癌の診断 C E Αや α—フエトプロテインの様に、 個体発生時に産生され るタンパク質でありながら癌細胞で有意に産生上昇の認められるタンパク質を ί¾¾と した診断法が されている。 しかし擬陰性及び擬陽性力多いこと、 並びにこれらの 抗原タンパク質を産生しない癌種力存在する (例えば —フエトプロテイン ί浙臓癌 に限局されたタンパク質である) ことなどから、 確定診断できる割合は、 癌全体の 5 0 %にも満たないの力 状である。 従って、 より確率の高い癌の診断方法の ¾¾カ望 まれている状況にあリ、 とりわけ悪'! の低い段階でも癌を検出しうる新たな診断法 の確立力 s '求められている。 発明の開示  Heretofore, there has been a diagnostic method in which a protein which is produced during ontogeny but is significantly increased in the production of cancer cells, such as CE II and α-fetoprotein, is used as a diagnostic method. However, due to the large number of false-negative and false-positive powers, and the existence of cancer types that do not produce these antigenic proteins (for example, --fetoprotein, which is a protein restricted to esophageal cancer), It is less than 50% of the total cancer. Therefore, there is a need for a method of diagnosing cancer with a higher probability, and there is a need for the establishment of a new diagnostic method that can detect cancer even at a low stage of evil. Disclosure of the invention

本発明 Ρ 5 3力不活化した際に発現上昇する遺伝子、 あるいは該遺伝子がコ一 ドするポリぺプチドに対する抗体を利用した、 癌の診断薬及び癌の診断方法を提供す ることを目的とする。 すなわち本発明 Ρ 5 3の不活化により発現力 ^誘導され、 か つ食 m 、 胃癌、 肺癌、 肾癌、 甲 »¾、 耳下職、 尿管癌、 膀胱癌、 子宮癌、 肝 癌、 乳癌、 卵鎌、 卵管癌等の各種ヒト癌において発現上昇力^められる、 I RGThe object of the present invention is to provide a diagnostic agent for cancer and a method for diagnosing cancer, using a gene whose expression is increased upon inactivation by force or an antibody against a polypeptide encoded by the gene. I do. That is, the expression power is induced by inactivation of the present invention 53, and Eating m, stomach cancer, lung cancer, 肾 cancer, ¾ »¾, parotid, ureteral cancer, bladder cancer, uterine cancer, liver cancer, breast cancer, sickle, fallopian tube, etc. I, RG

27と称するポリペプチドをコードする遺伝子、 及び該 I RG27に対する抗体を利 用した、 新規な癌の診断薬及び癌の診断方法などを提供することを目的とする。 本発明者ら 新規な癌の診断用マ一力一 (腫瘍マーカ一) の開発のために、 癌抑 制遺伝子産物である P 53を利用することを考えた。 An object of the present invention is to provide a novel diagnostic agent for cancer, a method for diagnosing cancer, and the like using a gene encoding a polypeptide designated as No. 27 and an antibody against IRG27. The present inventors have considered using P53, which is a tumor suppressor gene product, for the development of a novel cancer diagnostic technique (tumor marker 1).

P 53遺伝子 ヒトの多種の癌で最も高 に遺伝子変異力 出されている遺伝 子である。 1989年に野生型 p 53遺伝子がクローン化され、 その機能籠力 わ れた結果、 野生型 p 53はトランスフォーメーション (癌化) を抑制すること、 及び 野生型 p 53の導入により腫瘍原性力 下することなどの賴から、 「癌細胞におい て欠損、 不活化した遺伝子であり、 しかもその正常な遺伝子は癌細胞を正常細胞に戻 す働きがある遺伝子」 として定義される、いわゆる 「癌抑制遺伝子」 の 1つであるこ とが明らかとなった (蛋白質核酸酵素、 35:54-55,1990) 。 P53 gene The gene with the highest mutation level in a variety of human cancers. In 1989, the wild-type p53 gene was cloned and its function was confirmed. As a result, wild-type p53 suppressed transformation (carcinogenesis), and the introduction of wild-type p53 resulted in tumorigenicity. In other words, it is defined as a gene that has been deleted or inactivated in cancer cells, and the normal gene has the function of returning cancer cells to normal cells. It was found to be one of the “genes” (protein nucleic acid enzyme, 35: 54-55, 1990).

53遺伝子{^ 1^、 肝癌、 膀胱癌をはじめとするあらゆる組織の癌のうちの約 50%において異常 (多くはミスセンス変異と^体欠失) が認められており、 p 5 3遺伝子の異常による p 53の不活化 癌の発生及び進行に深く関わっていること 力広く知られている (Mu r ak ami I, e t a 1. , Am. J . Re s p i r. C r i t. Ca r e. Me d. , 154, 1 1 17- 1 123, 1 996、 Ka n g MS, e t a 1. , I n t. J. Canc e r, 67, 898-902, 1 996、 Uc h i d a T, e t a 1. , J. Ur o l. , 153, 1097- 1 104, 1995) 。 また発癌過程で p 53遺伝子は癌の悪髓カ高まる前に異 常カ'多く生じることカ示されている (宫木 美知子等、 類医学、 10、 964-9 68、 1992、 Mi y ak i M, e t a 1. , Can c e r Re s. , 50 , 7166-7173, 1990) 。 更に、 癌の進行にともなって p 53遺伝子の異 常が高^ に認められるようになることも報告されている (Uc h i d a T, e t a l. , J. Ur o l. , 153, 1097- 1 104, 1 995) 。  53 genes {^ 1 ^, abnormalities (mostly missense mutations and ^ body deletions) are found in about 50% of cancers of all tissues, including liver and bladder cancers, and abnormalities in the p53 gene Is widely known to be deeply involved in the development and progression of cancer (Murakami I, eta 1., Am. J. Respirr. Crit. Carre. Med., 154, 1117-1123, 1996, Kang MS, eta 1., Int. J. Cancer, 67, 898-902, 1996, Uchida T, eta 1., J. Urol., 153, 1097-1104, 1995). In addition, it has been shown that the p53 gene occurs more frequently during the carcinogenesis process before the cancer eradicates. (Michiko Takaki, et al., Applied Medicine, 10, 964-968, 1992, Miyak i M, eta 1., Cancer Res., 50, 7166-7173, 1990). Furthermore, it has been reported that abnormalities of the p53 gene become highly recognized as the cancer progresses (Ucida T, etal., J. Urol., 153, 1097-1). 104, 1 995).

本発明者らはこのような、 様々な癌において高 MJ¾の遺伝子異常が見出されている P 53に着目し、 p 53遺伝子の異常 (p 53の不活化) に伴い発現上昇する因子 について聽検討を行った。 すなわち、 P 53を不活化させた繊ぇ形質^ffl胞 で特異的に発現する遺伝子を選別した結果、 複数の遺伝子の取得に成功し、 これらの 遺伝子の内、 I R G 27 ( i mm o r t a l i z at i on r e l at e d g e n e 27) と命名した因子の遺伝子が、 p 53の不活化にともなって に発 昇しており、 また各 S¾細胞で発¾±昇しているという知見を得た。 さらに本発明者 らは、 癌患者 24症例中 17症例 (約 70%) において、 I RG27遺伝子が非腫瘍 部に較べて腫瘍部で発 昇していることを示す知見を得、 I RG27遺伝子を各種 癌の診断に利用できることを見出した。 さらに本発明者ら I RG27ポリべプチ ドに¾"1 "る抗体を作製し、 I RG 27ポリペプチドに対する抗体も癌の診断に有効で あることを明らかにした。 The present inventors have found high MJ¾ gene abnormalities in such various cancers Focusing on P53, we examined factors that increase in expression due to p53 gene abnormality (p53 inactivation). That is, as a result of selecting genes that are specifically expressed in the fibril trait ^ ffl cells in which P53 was inactivated, we succeeded in obtaining a plurality of genes, and of these genes, IRG 27 (imm ortaliz at i It was found that the gene of the factor named on rel at edgene 27) was evolved along with inactivation of p53 and was elevated ± in each S cell. Furthermore, the present inventors obtained the finding that 17 of the 24 cancer patients (approximately 70%) showed that the IRG27 gene was elevated in the tumor part compared to the non-tumor part, and We found that it can be used for diagnosis of various cancers. Furthermore, the present inventors have prepared an antibody corresponding to the IRG27 polypeptide, and have shown that an antibody against the IRG27 polypeptide is also effective for cancer diagnosis.

ホモロジ一検索の結果、 I RG27遺伝子 インタ一フエロンで発現が誘導され る I SG20遺伝子と高い相同性 (98. 1%) を有していた。 I SG2C PM Lや SP 100とともに nu c 1 e a r bo d yに局在すること力報告されている 、 その機能に関しては不明である (Gongo r a C, e t a 1. , J. Β i ο 1. Ch em. , 272, 19457— 19463, 1997) 。 バ一キットリン ノ^ BD aud i由来である I S G 20 {^ ヒト末梢血白血球由来の I RG 27と比較 して 2アミノ酸残基欠失したタンパク質であったため、 ヒト末梢血から得られた I R G27をコードする 3種のクローンの塩基配列を鎖:斤した結果、 何れのクローンにも アミノ酸配列に欠失は認められなかった。 一方、 マウス型の I RG 27がヒト型の I RG27と同じアミノ酸残基数を持っていたことより、 ヒト末梢血白血球由来の I R G 27が本来のァミノ酸配列を有しておリ、 癌細胞である D aud i細胞よリ得られ た I SG20は Daud i細胞特有のアミノ酸配列を有していると考えられた。 さら に、 I RG 27と同一のアミノ酸配列 (塩基配列は 2塩 8目違) を有するタンパク質 として、 エストロゲン刺激で遺伝子発現が誘導される HEM45 (Pent e c o s t BT, J. St e r o i d B i ochem. Mo l. B i o l. , 64, 25 — 33, 1998) も見出された。 以上のように I RG27 I 公知のタンパク質である I S020及び HEM45 と類似あるいは同一のアミノ^ S列を有するタンパク質であった。 しかし、 当該 I SO 20及び HEM 45に関しては癌との関連は全く分かっていなかった。 すなわち P 53の不活化により発現が誘導され、 種々の癌の診断に有用であることなど何ら明 らかにされてはいなかった。 As a result of the homology search, the RG27 gene had high homology (98.1%) with the ISG20 gene whose expression was induced by interferon. It has been reported that it co-localizes with n SG 1 ear body along with I SG2C PM L and SP 100, but its function is unknown (Gongo ra C, eta 1., J. Β iο 1. Chem , 272, 19457- 19463, 1997). ISG20 from ^ BD audi ^ ^ IRG27 derived from human peripheral blood because it is a protein with two amino acid residues deleted compared to IRG27 from human peripheral blood leukocytes The nucleotide sequences of the three clones encoding were cloned, and no amino acid sequence deletion was found in any of the clones. On the other hand, since mouse IRG27 had the same number of amino acid residues as human IRG27, IRG27 derived from human peripheral blood leukocytes had the original amino acid sequence, ISG20 obtained from Daudi cells was thought to have an amino acid sequence unique to Daudi cells. Furthermore, as a protein having the same amino acid sequence as IRG27 (base sequence is 8 different salts), HEM45 (Pent ecost BT, J. Steroid Biochem. l. Biol., 64, 25-33, 1998). As described above, it was a protein having an amino ^ S sequence similar to or identical to that of IRG27I known proteins, IS020 and HEM45. However, the relationship between the ISO 20 and HEM 45 was not known at all. That is, it has not been clarified that the expression is induced by the inactivation of P53 and that it is useful for diagnosis of various cancers.

本発明は以上のような知見に基づき完成するに至ったものである。  The present invention has been completed based on the above findings.

即ち本発明  That is, the present invention

(1) 以下の (a) 及び (b) の を有する遺伝子の正鎖及び逆鎖の、 少なくと も連続した 17塩基の配列よりなる 1本鎖又は 2本鎖 DNA、 あるいはこれらの DN Aの標酵を有効成分とする、 癌の診断薬、  (1) Single- or double-stranded DNA consisting of at least 17 contiguous bases of the positive and reverse strands of the gene having the following (a) and (b), or the DNA of A diagnostic agent for cancer that uses a standard enzyme as an active ingredient.

(a) 癌抑制因子 p 53の不活化により発現が誘導される  (a) Expression is induced by inactivation of tumor suppressor p53

( b ) 正常繊と比較して癌繊にお 、て発現の上昇が認められる  (b) Increased expression in cancer fibers compared to normal fibers

(2) 以下の (a) 、 (b) 及び (c) の ®を有する遺伝子の正鎖及び逆鎖の、 少なくとも連続した 17塩基の配列よりなる 1本鎖又は 2本鎖 DNA、 あるいはこれ らの DNAの標^ #:を有効成分とする、 癌の診断薬、  (2) Single- or double-stranded DNA consisting of at least 17 contiguous bases of the normal and reverse strands of the gene having the following (a), (b) and (c), or DNA target ^ #: The active ingredient, cancer diagnostics,

(a) 癌抑制因子 p 53の不活化により発現力誘導される  (a) Inducibility is induced by inactivation of tumor suppressor p53

( b ) 正常繊と比較して癌繊にぉ 、て発現の上昇カ められる  (b) Increased expression in cancer fibers compared to normal fibers

(c) 配列番号: 14〜配列番号: 29いずれか記載の塩基配列を含有する  (c) contains the nucleotide sequence of any one of SEQ ID NO: 14 to SEQ ID NO: 29

( 3 ) 配列番号: 3〜酉己列番号: 5いずれか記載の塩基配列よリなる遺伝子又はそ のアレル変異体遺伝子に対する mRNAを特異的に検出し得る 1本鎖又は 2本鎖 DN (3) Single-stranded or double-stranded DN capable of specifically detecting mRNA for a gene consisting of the nucleotide sequence of any one of SEQ ID NOS: 3 to 5 or allele mutant gene thereof

A、 あるいはこれらの DNAの標^ ίφ:を有効成分とする、 癌の診断薬、 A, or a diagnostic agent for cancer, comprising the target of these DNAs as the active ingredient.

( 4 ) 配列番号: 3〜配列番号: 5 、ずれか記載の塩基配列よリなる遺伝子又はそ のアレル変異体遺伝子の正鎖及び逆鎖の、 少なくとも M した 17塩基の配列よりな る 1本鎖又は 2本鎖 DNA、 あるいはこれらの DNAの標隱を有効成分とする、 癌 の診断薬、  (4) SEQ ID NO: 3 to SEQ ID NO: 5, consisting of a sequence consisting of at least M 17 bases of the positive and reverse chains of the gene consisting of the base sequence described in the sequence or the allele mutant gene thereof A diagnostic agent for cancer, comprising strand or double-stranded DNA, or the labeling of these DNAs as an active ingredient.

(5) ハイプリダイゼ一シヨン反応用のプロ一ブ又は P C R反応用のプライマーで あることを TOとする、 前記 (1) 〜 (4) いずれか記載の癌の診断薬、 (6) PCR反応用のプライマ一の長さが 17塩基〜 50塩基であることを難 とする、 前記 (5) 記載の癌の診断薬、 (5) The diagnostic reagent for cancer according to any one of (1) to (4), wherein the probe is a probe for a hybridization reaction or a primer for a PCR reaction, (6) The diagnostic agent for cancer according to (5), wherein the length of the primer for the PCR reaction is difficult to be 17 to 50 bases.

(7) 以下の A、 B又は Cのプライマーセット、 あるいはこれらのプライマーの少 なくとも 17塩基以上の配列よりなる該プライマ一セットを有効成分とする、 前記 ( 5) 又は(6) 記載の癌の診断薬、  (7) The cancer according to (5) or (6), wherein the following A, B, or C primer set, or a set of said primers comprising a sequence of at least 17 bases or more of these primers is used as an active ingredient. Diagnostics,

(A)  (A)

5' 側プライマ一配列 TGAGGGCGCAGAGGCAGGCAGCAT (配列番号: 8 )  5 'primer sequence TGAGGGCGCAGAGGCAGGCAGCAT (SEQ ID NO: 8)

3' 側プライマ一配列 CCGAGCTGTGTCCAAGCAGGCTGT (配列番号: 9 )  3 'primer sequence CCGAGCTGTGTCCAAGCAGGCTGT (SEQ ID NO: 9)

(B)  (B)

5' 側プライマ一配列 AAAGGCAAGCTGGTGGTGGGTCAT (配列番号: 10)  5 'primer sequence AAAGGCAAGCTGGTGGTGGGTCAT (SEQ ID NO: 10)

3' 側プライマ一配列 CTGTCCCAAAAAGCCGAAAGCCTC (配列番号: 1 1)  3 'primer sequence CTGTCCCAAAAAGCCGAAAGCCTC (SEQ ID NO: 11)

(C)  (C)

5' 側プライマ一酉己列 TTCCGCCCCTGACTTCACTTGATAACAAAC (配列番号: 12) 3' 側プライマ一酉己列 CAGGCCGGATGAACTTGTCGT (配列番号 : 13)  5'-side primer, rooster TTCCGCCCCTGACTTCACTTGATAACAAAC (SEQ ID NO: 12) 3'-side primer, rooster CAGGCCGGATGAACTTGTCGT (SEQ ID NO: 13)

(8) 以下の (a) 及び (b) の を有する遺伝子によリコ一ドされるポリぺプ チドを特異的に認識する抗体、 抗体フラグメント、 又はこれらの誘導体、  (8) an antibody, an antibody fragment, or a derivative thereof that specifically recognizes a polypeptide encoded by a gene having the following (a) and (b):

(a) 癌抑制因子 p 53の不活化により発現力 導される  (a) Induced by inactivation of tumor suppressor p53

( b ) 正常繊と比較して癌繊におレヽて発現の上昇が認められる  (b) Increased expression in cancer fibers compared to normal fibers

( 9 ) 配列番号: 14〜配列番号: 29いずれ力記載の塩基配列を含有する遺伝子 によりコードされるポリペプチドを特異的に認識する抗体、 抗体フラグメント、 又は これらの誘導体、  (9) SEQ ID NO: 14 to SEQ ID NO: 29, an antibody, an antibody fragment, or a derivative thereof that specifically recognizes a polypeptide encoded by a gene containing the nucleotide sequence described in any one of the above sequences;

(10) 配列番号: 1又 (iffi列番号: 2記載のアミノ酸配列よりなるポリペプチド 又はそのアレル変異体を特異的に認識する抗体、 抗体フラグメント、 又はこれらの誘 靴  (10) An antibody, antibody fragment, or antibody thereof that specifically recognizes a polypeptide having the amino acid sequence of SEQ ID NO: 1 or (iffi, SEQ ID NO: 2, or an allelic variant thereof)

(1 1) 前記 (8) 〜 (10) いずれか記載の抗体、 抗体フラグメント、 又はこれ らの誘 ^を有効成分とする、 癌の診断薬、  (11) A diagnostic agent for cancer, comprising the antibody, antibody fragment, or derivative thereof according to any of (8) to (10) as an active ingredient.

(12) 前記 (1) 〜 (7) 又は前記 (1 1) いずれか記載の癌の診断薬を用いる ことを とする、 癌の診断方法、 (12) The diagnostic agent for cancer according to any one of (1) to (7) or (11) is used. A method of diagnosing cancer,

(13) 診断対象として繊又 ί細胞を用いることを赚とする、 前記 (12) 記載の癌の診断方法、  (13) The method for diagnosing cancer according to the above (12), wherein the cell is used as a diagnostic object.

(14) 診断対象として血液、 唾液を含む術夜または尿を用いることを とする 、 前記 (12) 記載の癌の診断方法、  (14) The method for diagnosing cancer according to (12), wherein blood or saliva-containing operative night or urine is used as a diagnosis target.

(15) 固开缩を診断するための、 前記 (12) 〜 (14) いずれカ 己載の癌の診 断方法、  (15) any one of the above (12) to (14) for diagnosing fixation;

(16) 腎癌又 (娥胱癌を含む泌尿器系の癌を診断するための、 前記 (12) 〜 ( 15) いずれか記載の癌の診断方法、  (16) The method for diagnosing cancer according to any one of (12) to (15) above, for diagnosing renal cancer or urinary cancer including erectal cancer.

(17) 配列番号: 14〜配列番号: 29いずれか記載の塩基配列を含有し、 かつ 癌抑制因子 Ρ 53の不活化により発現が誘導される遺伝子、 ならびに  (17) a gene comprising the nucleotide sequence of any one of SEQ ID NOs: 14 to 29 and whose expression is induced by inactivation of tumor suppressor Ρ53, and

(18) 配列番号: 30〜配列番号: 41いずれか記載の塩基配列を含有し、 かつ 癌抑制因子 Ρ 53の不活化により 力 ¾1制される遺伝子、 に関する。 本発明において癌の診断薬の有効成分とされる 「DNA」 と (a) 癌抑制因子 P 53の不活ィ匕によリ発現が誘導される、 (b) 正常糸職と比較して癌 において の上昇が認められる、 という を有する遺伝子の、 少なくとも ¾ した 17塩 基以上の配列よりなる DNAを指す。 (18) a gene which comprises the nucleotide sequence of any one of SEQ ID NOs: 30 to 41 and is regulated by inactivation of the tumor suppressor factor 53. "DNA", which is an active ingredient of a diagnostic agent for cancer in the present invention, is expressed by (a) inactivation of tumor suppressor P53, and (b) cancer compared to normal thread Refers to a DNA having a sequence of at least 17 bases or more of a gene having the following:

ここで 「 (a) 癌抑制因子 p 53の不活化により発現が誘導される遺伝子」 例 え ( 下の工程 A〜Eを含む方法によリ単離すること力 ^できる。  Here, "(a) a gene whose expression is induced by inactivation of the tumor suppressor p53" can be isolated, for example, by a method including the following steps A to E.

A. ヒト正常培養細胞株に変異型または欠失型 p 53遺伝子を ii ijに発現させること によリ、 正常型 P 53の機能を不活化させた形質転換細胞を得る工程。  A. A step of obtaining a transformed cell in which the function of normal P53 is inactivated by expressing a mutant or deleted p53 gene in iiij in a human normal cultured cell line.

B. A. の形質車 ¾ϋ胞ょリ全 RNAを調製する工程。  B. A. A. trait wheel Step of preparing total RNA.

C. 形質,細胞由来の mRN Αを錡型としてディファレンシャルディスプレイを行 うことにより、 p 53の不活化特異的に発現する遺伝子を PCRにより検出し、 該遺 伝子の i»S己列の決定を行う工程。  C. By performing differential display using mRNΑ derived from a trait or a cell as type II, a gene that is specifically expressed in the inactivation of p53 is detected by PCR, and the i »S identity of the gene is determined. Step of performing.

D. p 53不活化特異的^ I伝子の各禾膨質^ iffl胞における RT— PC Rを行い 、 発現性の確認を行う工程。 D. Perform RT-PCR on p53 inactivation-specific ^ I genes in each swelling ^ iffl cell A step of confirming the expression.

E. ヒト cDNAライブラリ一からの全長 cDNA (遺伝子) をクロ一ニンク 'する 工程。  E. Cloning the full-length cDNA (gene) from a human cDNA library.

上記工程 Aで用いられる変異型または欠失型 p 53遺伝子は、 正常型 p 53遺伝子 (Mol. Cell. Biol. ,7,p961 (1987)、 Japanese Cancer Research Resources Bank, Dep os it No.C0104) をもとにして、 以下のような変異または欠失を施すことにより得る こと力できる。 すなわち、 ヒト癌で高^ TOに見られる変異である第 175番目のアル ギニンからヒスチジンへの変異、 第 248位のアルギニンからトリプトファンへの変 異、 又は第 273位のアルギニンからヒスチジンへの変異 (Lasky T. et a 1., Environ .Health Perspect. , 104, 1324-1331 (1996))などを遺伝子レベルで施すことにより 、 上記変異型 P 53遺伝子を得ることができる。 また、 p 53の重合 (四量体形成) に関与する領域である第 302位〜第 393位アミノ酸残基 (Mol. Cell. Biol., 12, p5 581-5592(1992)) 以外の部分を遺伝子レベルで欠失させることにより、 上記欠失型 p 53遺伝子を得ることカできる。 ここで変異型 p 53遺伝子の取得に関して 正常 型の p 53迪伝子 (Japanese Cancer Research Resources Bank, Deposit No. C0104 ) を錡型として、 目的の部位に変異が入るように設定した 5' 側のプライマ一と正常 型 P 53遺伝子の 3' *¾{』プライマ一、 及び目的の部位に変異力入るように設定し た 3' 側のプライマーと正常型 p 53遺伝子の 5, 末 プライマ一をそれぞれ用い て PCR反応を行い、 次いでこれら 5, 側及び 3' 側の増幅断片を連結するために両 断片を混合し、 正常型 P 53遺伝子の 5' 側と 3, 側のプライマ一を用いて PCRに よる再増幅を行い、 目的の変異型 p 53遺伝子を得ること力 きる。 また、 欠失型 p 53遺伝子の取得 例えば ρ 53の第 302位〜第 393位を増幅するプライマ一 を作製し、 常法により PC R反応を行い増幅すれば良い。 なおこれら変異型及び欠失 型 P 53遺伝子の作製にあたって 発現べクタ一に導入するために、 適当な制限酵 素切断部位をプライマ一配列に加えることカ好ましい。 以上のような PCRによる変 異導入の他、 K u n k e 1法による i n v i t r o mu t age ne s i s (M e t hods i n En zymo l o gy、 100、 p448 (1 983) ) によ つても遺伝子変異の導入を行うことカできる。 The mutant or deleted p53 gene used in the above step A is a normal p53 gene (Mol.Cell.Biol., 7, p961 (1987), Japanese Cancer Research Resources Bank, Depo sit No.C0104). And the following mutations or deletions. That is, mutations from arginine at position 175 to histidine, mutations from arginine at position 248 to tryptophan, or mutations from arginine at position 273 to histidine, which are mutations found in high ^ TO in human cancers ( The mutant P53 gene can be obtained by applying Lasky T. et a 1., Environ. Health Perspect., 104, 1324-1331 (1996)) or the like at the gene level. In addition, the portion other than amino acid residues 302 to 393 (Mol. Cell. Biol., 12, p5 581-5592 (1992)), which is a region involved in the polymerization (tetramer formation) of p53, By deleting at the gene level, the above-mentioned deleted p53 gene can be obtained. Here, regarding the acquisition of the mutant p53 gene, the normal type p53 gene (Japanese Cancer Research Resources Bank, Deposit No. C0104) was used as type 錡, and the 5 'side was set so that the mutation would enter the target site. The primer and the 3 '* ¾ {"primer of the normal P53 gene, and the 3'-side primer and the 5'-end primer of the normal p53 gene, which were designed to introduce mutations into the target site, respectively PCR reaction, and then, to ligate the amplified fragments on the 5 'and 3' sides, mix both fragments, and perform PCR using primers on the 5 'and 3' sides of the normal P53 gene. Re-amplification to obtain the desired mutant p53 gene. Further, acquisition of a deletion type p53 gene, for example, a primer for amplifying the 302nd to 393rd positions of ρ53 may be prepared and amplified by a PCR reaction according to a conventional method. In addition, it is preferable to add an appropriate restriction enzyme cleavage site to the primer sequence in order to introduce the mutant and deleted P53 genes into the expression vector. In addition to the mutations introduced by PCR as described above, in vitro mutage ne sis (Met hods in Enzymology, 100, p448 (1983)) by the Kunke 1 method In addition, gene mutation can be introduced.

工程 Aにおいて変異型または欠失型 P 5 3遺伝子を翻に発現させた形質 ¾ί^¾Β 胞を得るために ( 得られた変異型 P 5 3遺伝子及び欠失型 p 5 3遺伝子を p CAG G S (Gene, 108, P193-200 (1991)) 等の哺乳動物用発現べクタ一に挿入して謹え発 現ベクターを構築し、 これをヒト正常培養細胞に導入し、 培養を行えば良い。 発現べ クタ一として P CAG G Sを用いる場合、 形質転換細胞を薬剤添加によリ 31ί尺するた めに、 ブラストサイジン S耐性遺伝子 (b s r ) を予め導入しておいても良い。 導入 に用いられるヒト正常培養細胞はいかなるヒト正常培養細胞であっても良いが、 例え ばヒト正常肺 2倍 芽細胞株である H E L 2 9 9 (大日本製薬) などカ举げられ る。 前言 鹏え発現べクタ一をヒト正常培養細胞に導入する方法として リン酸力 ルシゥム共沈法、 リボソームを用いて DNA分子を導入する方法 (リボソーム法、 リ ポフエクチン法、 リポフエクトァミン法、 HV J—リボソーム法) 、 エレクトロボレ —シヨン法、 マイクロインジェクション法等の常法により行えばよい。 形質^ Sffl胞 (i, 例えば 2 g Ζπι 1のブラストサイジン S等の薬剤を添加することにより選択す ることができる。 Variant or deletion type P 5 3 gene mutant P 5 3 gene and the deletion type (obtained in order to obtain a transformant ¾ί ^ ¾Β vesicles were expressed transliteration p 5 in Step A 3 gene p CAG GS (Gene, 108, P 193-200 ( 1991)) was inserted into a mammalian expression base Kuta one such building a謹example onset expression vector, which was introduced into human normal cultured cells, and culture may be When PCAGGS is used as an expression vector, a blasticidin S resistance gene (bsr) may be introduced in advance in order to reduce the size of the transformed cells by adding a drug. The human normal cultured cells to be used may be any human normal cultured cells, but examples include human normal lung double blast cell line, HEL 299 (Dainippon Pharmaceutical). Phosphoric acid co-precipitation method, ribosome DNA molecules can be introduced using standard methods (ribosome method, lipofectin method, lipofectamine method, HV J-ribosome method), electrophoresis method, microinjection method, etc. Sffl vesicles (i, for example, can be selected by adding a drug such as 2 g Ζπι1 of blasticidin S).

以上のようにして作製された形質転 MB胞を培養することにより、 変異型または欠 失型 P 5 3遺伝子を過剰に発現させた形質転換細胞を得ることができる。 p 5 3は四 量体を形成して機能すること力知られているが、 形質転擁胞内で変異型または欠失 型 P 5 3を f!jに発現させることにより、 正常な四量体形成が阻害され、 その結果、 正常型 p 5 3の機能力不活化される。 p 5 3の機能の不活化により、 ベクタ一のみを 導入したコントロールの形質転換細胞と比較して、 細胞分裂の維持が ^される。 工程 Bに含まれる全 RN Aの調製 常法に従って行えば良い。 例え S D S, N P - 4 0 , T r i t o n— X 1 0 0等の界面活'性剤、 もしくはフエノール存在下で 細胞を ¾することにより細胞を分解する方法力挙げられる。 また、 ホモゲナイザ一 等の物理的方法によって細胞を破砕し、 グァニジンチオシァネートで細胞を した 後、 塩化セシウム密度勾酉 ΰΐ心によって全 RNAを¾ 化させる、 また グァニジ ンチオシァネート存在下で細胞を腿した後、 酸驗件下フエノール腿 (隱グァ 二ジンチォシアン酸一フエノールクロ口ホルム法) することによリ、 全 RNAを調 製することができる。 By culturing the transformed MB vesicles prepared as described above, a transformed cell overexpressing the mutant or deleted P53 gene can be obtained. Although p53 is known to function by forming a tetramer, normal tetramerization is achieved by expressing mutant or deleted P53 in f! j in the transformed vesicle. Inhibition of body formation and consequent inactivation of normal p53 function. Inactivation of p53 function maintains cell division compared to control transformed cells into which only one vector has been introduced. Preparation of total RNA contained in step B It may be performed according to a conventional method. For example, there is a method of degrading cells by exposing cells in the presence of a surfactant such as SDS, NP-40, Triton-X100, or phenol. In addition, cells are disrupted by a physical method such as a homogenizer and the cells are crushed with guanidine thiosinate, and then the total RNA is denatured with a cesium chloride density gradient. After the acid test, the phenolic thigh (Oki Gua) Total RNA can be prepared by the diphenyl thiocyanate monophenol chromatography method).

工程 Cに含まれるディファレンシャルディスプレイ法を用いた p 53不活ィ bffl胞特 異的に発現にする遺伝子の選別のために まず、 RNAmapキット (GenHu n t e r社) 等の市販のキットを用いて、 RT— PCRによリー本鎖 DNAを合成後 、 [a-35S] d ATPを用いて増幅断片を標識し、 6%変性ポリアクリルアミド ケ «気泳動を行う。 電気泳動後ゲルを 乾固してォ一トラジォダラフィ一を行 、 、 正常型 P 53形質転換細胞 (ベクターのみを導入した細胞) よりも P 53不活ィ bffl 胞 (変異型または欠失型 P 53遺伝子導入細胞) で発現の上昇が認められた DNA、 すなわち目的とする p 53不活化特異的発 ¾S伝子に対応する DNAを検出後、 ゲル より DNA断片を回収する。 次いで、 再度 PCRを用いて再増幅した後に、 PCR断 片を回収し pT7B l ue (R) T (Novagen社) 等の PCRクロ一ニンク'ベ クタ一に導入し、 常法に従って塩基配列の決定を行う。 このようにして、 P 53不活 化特異的に発現する遺伝子の D N A断片を取得することができる。 In order to select genes for p53-inactivated bffl-vesicle-specific expression using the differential display method included in step C, first, RT kits such as RNAmap kit (GenHunter) were used. — After the synthesis of single-stranded DNA by PCR, the amplified fragment is labeled with [a- 35 S] d ATP, and subjected to 6% denaturing polyacrylamide gel electrophoresis. After electrophoresis, the gel is evaporated to dryness, and P53-inactivated bffl cells (mutated or deleted P53) are compared to normal P53-transformed cells (cells into which only the vector has been introduced). After detecting DNA whose expression has been increased in the transfected cells, that is, DNA corresponding to the target p53 inactivation-specific gene, the DNA fragment is recovered from the gel. Then, after re-amplification using PCR again, the PCR fragments are collected, introduced into a PCR clone vector such as pT7Blue (R) T (Novagen), and the nucleotide sequence is determined according to a conventional method. I do. In this manner, a DNA fragment of a gene that is specifically expressed by inactivating P53 can be obtained.

工程 D 工程 Cで選別された DNAの発現性の確認に関する である。 該工程 I 得られたクローンの塩 ¾1己列をもとに適当なプライマー部分を設定し、 正常型 ( ベクタ一のみ導入) 、 変異型及び欠失型 p 53遺伝子導入形質転換細胞の全 RNAを 铸型として、 常法により PC R反応を行う。 PCRで遺伝子発現を検討するためには 、 増幅回数をコントロールする等定量的に断片を検出できる条件を設定する必要があ る。 その際、 [a-32P] dCTP存在下で DNA断片を標識するか、 また プ ライマ一の末端を標識したものを用いて DNA断片を標識し、 に増幅された DN A断片を検出する方法力簡便である。 このようにして設定された増幅回数 16〜 22回¾$が望ましぃ。 以上の PCRを行うことにより、 工程 Cで取得された DNA が P 53不活化特異的に発現する D N Aであることを確認することができる。 Step D This is for confirming the expression of the DNA selected in Step C. In step I, an appropriate primer portion was set based on the salt of the clone obtained, and the total RNA of the normal (mutated vector), mutant and deleted p53 gene-transformed cells was determined. Perform a PCR reaction by a conventional method as type 铸. In order to examine gene expression by PCR, it is necessary to set conditions for quantitatively detecting fragments, such as controlling the number of amplifications. At this time, a method of labeling the DNA fragment in the presence of [a- 32 P] dCTP or labeling the DNA fragment with a primer labeled at the end of the primer to detect the DNA fragment amplified to It is simple and convenient. The amplification frequency set in this way is preferably 16 to 22 times $. By performing the above PCR, it can be confirmed that the DNA obtained in the step C is a DNA that is specifically expressed in the P53 inactivation.

工程 Eにおける全長 cDNA (遺伝子) のクローニングに関して ヒト各 MffiM における発現性を検討した後、 発現の認められる糸 の mRNAよリ作製したヒト c DNAライブラリ一を用い、 例え^ X程 Cで得られた DNA断片をプローブとして、 全長 cDN Aをクローニングすればよい。 cDN Aライブラリ一の作製 ( 繊由 来の mRNAを錡型とし、 市販の cDNA合成キットを用いて行うことカ^ I能であ る。 また、 ヒト組織由来 cDNAライブラリ一( 市販のものを用いることも可能で ある。 After cloning of the full-length cDNA (gene) in step E, the expression in each human MffiM was examined. Using a DNA fragment as a probe, The full-length cDNA can be cloned. Preparation of a cDNA library (Use a commercially available cDNA synthesis kit to convert the mRNA from the origin into type I. A human tissue-derived cDNA library (use a commercially available cDNA library) Is also possible.

本発明の遺伝子 前記 (a) の赚と共に 「 (b) 正常繊と比較して癌繊に おいて発現の上昇力 s '認められる」 という特徴をも有するものである力 m 前 記工程 A〜Eによリ得られた遺伝子の適当な部分をプローブとし、 同一患者の腫 5» 及び非腫瘍部より調製された RN A (例えば I n V i t r o g e n社の Hum an Tumo r Pane l B l o t s等を使用) 、 または患者及び健常人の同一繊 より調製された RN Aに対して、 常法によリノ一ザンブロット 斤を行うことにより 調べることができる。  The gene of the present invention together with the 赚 of the above (a), a force which also has the characteristic of “(b) an increase in expression s ′ in cancer fibers compared to normal fibers” m E. Using an appropriate part of the gene obtained by E as a probe, RNA prepared from tumors 5 and non-tumor of the same patient (for example, Hum an Tumor Panel B lots of In Vitrogen, etc.) Use), or RNA prepared from the same fiber of a patient and a healthy person, by performing a lino-san blot analysis using a conventional method.

以上のようにして得られた遺伝子の、 少なくとも連続した 17塩基以上の配列よリ なる DNAが、 癌の診断薬の有効成分とされる本発明の 「DNA」 であり、 fia¾伝 子に対する mRNAの存在を特異的に検出できるものであれば、 1本鎖であるか 2本 鎖であるかは問わず、 また前 ΐΗ¾伝子のいかなる位置に存するいかなる長さの DNA であっても良い。 さらに、 前記 1本鎖または 2本鎖 DNA力診断可能なように標識さ れたものであっても良い。 どのような DNAであれば前S¾伝子の対応 mRNAの存 在を特異的に検出し得るかに関して 以下に述べるような P C R法やハイプリダイ ゼ一シヨン法を実際に行うことによリ、 容易に判断することカ^?きる。  The DNA comprising at least a continuous sequence of at least 17 bases of the gene obtained as described above is the `` DNA '' of the present invention, which is an active ingredient of a diagnostic agent for cancer, and the mRNA of the fia fi gene is As long as its presence can be specifically detected, it may be single-stranded or double-stranded, and may be any length of DNA at any position in the gene. Further, the DNA may be labeled such that the single-stranded or double-stranded DNA can be diagnosed. Regarding what kind of DNA can specifically detect the presence of the corresponding mRNA of the pre-S gene, it can be easily performed by actually performing the PCR method and the hybridization method as described below. You can judge it.

ここで 「少なくとも ¾ した 17塩基」 との限定は、 確率論的に、 少なくとも 17 塩基あれば一つの遺伝子を特定するのに充分であるというネ Ιί¾こ基づくものである。 このような DNA 短いものであれば DNA合成機を用いて合成され、 長いもので あれば P C Rにより、 又 ii 当な制限酵素部位があればそれを利用することなどによ リ、 S調製することができる。  The limitation of "at least 17 bases" is stochastically based on the fact that at least 17 bases are sufficient to identify one gene. If such a DNA is short, it can be synthesized using a DNA synthesizer, if it is long, it can be prepared by PCR, or ii if there is an appropriate restriction enzyme site, it can be prepared using S. it can.

本発明の DNAの具体例としては、 前記 (a) 及び (b) の難を有し、 力つ配列 番号: 14〜酉己列番号: 29いずれ力記載の塩基配列を含有する遺伝子の ΙΜ¾び逆 鎖の、 少なくとも藤した 17塩基の配列よりなる 1本鎖又は 2本鎖 DNA、 あるい はこれらの標 力举げられる。 ここで配列番号: 14〜 29に記載の塩基配列は 、 前言 E 程 A〜Eによリ得られる新規な遺伝子の一部分に相当する塩基配列である 。 配列番号: 14〜 29いずれか記載の塩基配列を含有する遺伝子は、 前言 H 程 A〜 E記載の方法に従いクローニングすることができる力 より簡便には、 配列番号: 1 4〜配列番号: 29記載の塩謹己列の體に基づき、 該 DNAの適当な部分をハイブ リダイゼ一シヨンプローブに用い、 当該 DNA力良く発現している細胞由来の c DN Aライブラリ一をスクリー二ングすることなどによリ得ること できる。 その際の具 体的な手法は、 例え {^Molecular Cloning 2nd Edt. ,Cold Spring Harbor Laboratory Press(1989)等の基本書を参考にして行うこと力できる。 Specific examples of the DNA of the present invention include the genes having the above-mentioned difficulties (a) and (b) and containing the base sequence described in any of the following: Single-stranded or double-stranded DNA consisting of at least 17 nucleotides of reverse strand, or Is the value of these characteristics. Here, the nucleotide sequences described in SEQ ID NOs: 14 to 29 are nucleotide sequences corresponding to a part of the novel gene obtained by the above A to E. A gene containing the nucleotide sequence of any one of SEQ ID NOs: 14 to 29 can be cloned according to the method described in A to E in the above-mentioned H. More simply, SEQ ID NO: 14 to SEQ ID NO: 29 By using an appropriate part of the DNA as a hybridization probe based on the body of the salt, and screening a cDNA library derived from a cell that expresses the DNA well. I can get it. The specific method at that time can be performed by referring to a basic book such as {^ Molecular Cloning 2nd Edt., Cold Spring Harbor Laboratory Press (1989).

さらに、 本発明の D N Aの好ましレ^ Jとして、 配列番号: 3〜配列番号: 5レ、ずれ か記載の 配列よりなる I RG 27遺伝子の対応 mRNAを特異的に検出し得る 1 本鎖又は 2本鎖の DNA、 あるいはこれらの DNAの標 ϋ^^'挙げられる。 より具体 的に ( 前記 I RG27遺伝子の、 少なくとも した 17塩基の配列よリなる 1本 鎖又は 2本鎖 DNA、 あるいはこれらの標 I ^が挙げられる。 ここで配列番号: 3及 び 4に記載の塩翻己列 ヒト I RG 27遺伝子の塩基配列であり、 両者 5, 非 翻訳領域中の塩基配列が一部異なる以外は同じ塩基配列を有する。 配列番号: 5に記 載の塩 ¾15列はマウス I RG 27遺伝子の塩基配列である。 これらの遺伝子 前記 工程 A〜E記載の方法によって得ることができる。 また配列番号: 3〜5の配列情報 に基づき適当なプローブを作製し、 例えば白血球由来の cDNAライブラリ一をスクリ一 ニングすることによつても、 クロ一ニンク"すること力できる。 さらに I RG27遺伝 子は公知の HEM45遺伝子 (ac c e s s i on No. U88964 ; Pent e c o s t BT, J. St e r o i d B i o chem. Mo l. B i o l. , 6 4, 25— 33, 1998) と 2塩 ¾目違している (配列番号: 3の第 522位と第 71 1位) のみで後は同じ配列を有しているため、 該 HEM45を基にしても I RG 27の遺伝子を作製すること力ミ'できる。  Further, as a preferred level of the DNA of the present invention, a single strand or a single strand capable of specifically detecting the corresponding mRNA of the IRG27 gene consisting of SEQ ID NO: 3 to SEQ ID NO: 5, Examples include double-stranded DNA, or の ^^ 'of these DNAs. More specifically (a single-stranded or double-stranded DNA consisting of at least the 17-base sequence of the IRG27 gene, or a target I ^ thereof. Here, SEQ ID NOs: 3 and 4 The nucleotide sequence of the human IRG27 gene, which has the same nucleotide sequence except that both nucleotide sequences in the untranslated region are partially different from those of the human IRG27 gene. These are the nucleotide sequences of the mouse IRG27 gene These genes can be obtained by the methods described in the above-mentioned steps A to E. Also, an appropriate probe is prepared based on the sequence information of SEQ ID NOS: 3 to 5, for example, from leukocytes. Cloning can also be achieved by screening the cDNA library of IRG27. In addition, the IRG27 gene can be cloned from the known HEM45 gene (accession No. U88964; Pent ecost BT, J. Steroid). Bio chem. Mo l. Bio l., 64, 25-33, 1998) and the same sequence (SEQ ID NO: 3 at positions 522 and 711). I can create the gene for IRG27.

なお、 前記配列番号: 3〜配列番号: 5に記載の I RG 27遺伝子に アレル変 異体や遺伝的多型の存在している可能性もあり、 該ァレル変異体や遺伝的多型の遺伝 子の少なくとも纖し'た 1 7驢の配列よりなる DNA及びその標諭も、 癌の診 断薬の有効成分とすること力できる。 In addition, there is a possibility that allelic variants or genetic polymorphisms may exist in the IRG27 gene described in SEQ ID NO: 3 to SEQ ID NO: 5, and inheritance of the allelic variants or genetic polymorphisms is also possible. DNA consisting of at least a 17-strand assassin and its indicator can also be used as an active ingredient in cancer diagnostics.

以上のような本発明の DNA ノ、ィプリダイゼーシヨン反応用のプローブ又は P CR反応用のプライマーとして癌の診断に用いられる。 ここで本発明の DNAを PC Rプライマーとして用いる場合の好ましい長さとして 1 7塩基〜 50塩 Sgj¾の 長さが挙げられる。 またハイプリダイゼ一シヨンのプローブとして用いる^の好ま しい長さとして 50塩基〜 500塩基 の長さ力 S挙げられる。  As described above, the DNA of the present invention is used as a probe for the reaction of PCR or a primer for the reaction of PCR for diagnosing cancer. Here, when the DNA of the present invention is used as a PCR primer, a preferred length is from 17 bases to 50 salts Sgj¾. A preferred length of ^ used as a probe for hybridization is a length S of 50 to 500 bases.

P C Rプライマ一の具体例として 以下の Α、 Β又は Cに記載の I R G 27遺伝 子由来の PC Rプライマーのセット、 あるいはこれらのプライマ一の少なくとも 1 7 塩基以上の配列よリなるプライマ一セットなどが挙げられる。  Specific examples of PCR primers include a set of PCR primers derived from the IRG27 gene described in Α, Β or C below, or a set of primers consisting of a sequence of at least 17 bases or more of these primers. No.

(A)  (A)

5' 側プライマ一配列 TGAGGGCGCAGAGGCAGGCAGCAT (配列番号: 8 )  5 'primer sequence TGAGGGCGCAGAGGCAGGCAGCAT (SEQ ID NO: 8)

3' 側プライマ一配列 CCGAGCTGTGTCCAAGCAGGCTGT (配列番号: 9 )  3 'primer sequence CCGAGCTGTGTCCAAGCAGGCTGT (SEQ ID NO: 9)

(B)  (B)

5' 側プライマ一配列 AAAGGCAAGCTGGTGGTGGGTCAT (配列番号: 10)  5 'primer sequence AAAGGCAAGCTGGTGGTGGGTCAT (SEQ ID NO: 10)

3' 側プライマー配列 CTGTCCCAAAAAGCCGAAAGCCTC (配列番号: 1 1)  3 'primer sequence CTGTCCCAAAAAGCCGAAAGCCTC (SEQ ID NO: 11)

(C)  (C)

5' 側プライマ一配列 TTCCGCCCCTGACTTCACTTGATAACAAAC (配列番号: 1 2) 3' 側プライマ一配列 CAGGCCGGATGAACTTGTCGT (配列番号 : 1 3)  5 'primer sequence TTCCGCCCCTGACTTCACTTGATAACAAAC (SEQ ID NO: 12) 3' primer sequence CAGGCCGGATGAACTTGTCGT (SEQ ID NO: 13)

以上の本発明の DNA(^ 反応に支障を与えないような適当な緩衝液に溶解するこ とにより、 癌の診断薬の有効成分とすること力^きる。 その際、 測定方法に応じて、 例え ^転写酵素、 Taq polymerase, dNTP、 反応停止液等をも含有するキットの形態 において使用すること力河能である。  By dissolving the DNA of the present invention in an appropriate buffer that does not hinder the reaction, it can be used as an active ingredient of a diagnostic agent for cancer. For example, it is Rikikawa no to use in the form of a kit that also contains transcriptase, Taq polymerase, dNTP, reaction stop solution, etc.

該診断薬を用いた癌の診断方法としては、 以下の方法カ举げられる。  Methods for diagnosing cancer using the diagnostic agent include the following methods.

1) 本発明の 1本鎖 DNA (ペア一となる正鎖及び逆鎖) を PCRプライマ一として 用い、 診断対象より採取した M^fflの糸 細胞や血液、 尿などから得られた全 RN Aまた ( ポリ (A) RNAを錡型として、 PCRにより診断を行う方 2) 本発明の 1本鎖または 2本鎖 DNAを標識し、 これをプローブとして、 ¾JM の 細胞や血液、 尿などから得られた全 RNAまたはポリ (A) RNAに対し てノーザンブロット により診断を行う方法。 1) Using the single-stranded DNA of the present invention (paired one-strand and reverse-strand) as a PCR primer, total RNA obtained from M ^ ffl thread cells, blood, urine, etc. collected from the subject to be diagnosed (Poly (A) RNA type 錡) 2) Label the single-stranded or double-stranded DNA of the present invention, and use this as a probe to diagnose total RNA or poly (A) RNA obtained from ¾JM cells, blood, urine, etc. by Northern blot. How to do.

以上の 1) および 2) の診断方法 例え (^Molecular Cloning 2nd Edt.,Cold Sp ring Harbor Laboratory Press(1989)等の基本書に基づき行うことができる。  The diagnostic method of the above 1) and 2) can be performed based on a basic book such as (^ Molecular Cloning 2nd Edt., Cold Spring Harbor Laboratory Press (1989)).

以下に具体例を示す。  Specific examples are shown below.

1) の PCRによる診断の具体的な手法として 例え i¾T の方法が挙げられる 。 まず、 前記本発明のプライマ一用 DNAを常法により合成し、 これを診断薬とする 。 次に ¾JMの繊 '細胞や血液、 尿などより、 前述の方法にて全 RNA又はポリ ( A) RNAを調製し、 これを錡型として、 MMTV— RT等の逆転写酵素により 1本 鎖 cDNAを調製する。 当該 1本鎖 cDNAの調製は、 例え {^Superscript pre-卿1 if ication system (Life Technologies, Gaithersburg,MD)等を用いることによリ容 易に行うこと力できる。 その後、 先のプライマ一を添加し、 常法により PCR反応を 行う。 PCR反応の条件として ( 例えば 95°C 1分、 60°C1分、 72°C2分を 3 0サイクル行った後に、 72 °Cで 10分加熱するような条件が挙げられる。 この PC R反応物を適当な のァガロースゲルにて電気泳動することにより、 I RG27の m R N Aの発現の有無を検出することカできる。  As a specific method of diagnosis by PCR in 1), there is, for example, the method of i 挙 げ T. First, the primer DNA of the present invention is synthesized by a conventional method, and this is used as a diagnostic agent. Next, total RNA or poly (A) RNA is prepared from ¾JM cells, blood, urine, etc. by the method described above, and this is used as type 錡. Is prepared. The preparation of the single-stranded cDNA can be easily performed by using, for example, {^ Superscript pre-Sir 1 cation system (Life Technologies, Gaithersburg, MD). After that, the primer is added and the PCR reaction is carried out in the usual manner. The PCR reaction conditions include, for example, 30 cycles of 95 ° C for 1 minute, 60 ° C for 1 minute, and 72 ° C for 2 minutes, followed by heating at 72 ° C for 10 minutes. Is electrophoresed on a suitable agarose gel to detect the presence or absence of the expression of mRNA of IRG27.

さらに、 臨床診断の場で頻繁に用いられる PC R法に基づく測定方法として 以 下の原理に基づくもの力 !J示される。  In addition, a measurement method based on the following principle, which is frequently used in clinical diagnosis, is based on the PCR method.

まず、 前記と同様に血液等より RN Aの抽出 -精製を行い、 ピオチン化プライマ一 を用いた対象検体の増幅 (PCR反応) を、 前記と同様の手法により行う。 その後、 アルカリ ¾®によリ増幅産物の一本化を行い、 相補的 DNAプローブを固定ィ匕した固 相とのハイブリダィゼ一シヨンを行う。 その後固相を洗浄し、 酵素標識アビジンを反 応させる。 固相を洗浄した後、 酵素基質を添加して発色反応を行い、 吸光度を測定す ることにより、 I RG27の mRNAの有無を検出することができる。  First, RNA is extracted and purified from blood or the like in the same manner as described above, and amplification (PCR reaction) of the target sample using the biotinylated primer is performed in the same manner as described above. Thereafter, the re-amplification product is unified with an alkaline solution and hybridized with the solid phase on which the complementary DNA probe is immobilized. After that, the solid phase is washed and reacted with enzyme-labeled avidin. After washing the solid phase, the enzyme substrate is added to perform a color reaction, and the absorbance is measured to detect the presence or absence of IRG27 mRNA.

その他、 i n s i t u PCR法 (Fernandez et al.,Mol. Carcinog, 20, 317-32 6, 1997) を用いることによつても診断を行うこと力 能である。 2) のノーザンプロット謹による診断の具体的な手法として 例え ( 下の 方法カ举げられる。 まず本発明の 1本鎖又は 2本鎖 DNAを; Κ ί^識ゃピオチン標 識してプローブを作製し、 これを診断薬とする。 2本鎖 DNAの 例えば前記 1) の手法により調製された PC R反応物を、 ニックトランスレーション法又はラン ダムプライムラべリンク"法などで32 P標識することなどにより作製される。 次に、 被 麵の繊 ·細胞や血液、 尿などより、 前記と同様の手法により全 RNA又 ポリ ( A) RNAを調製し、 常法によりホルムアルデヒドゲリ 気泳動及びナイ口ンメンブ レンへのブロッテイングを行う。 このメンブレンと、 先のプローブとのハイブリダィ ゼ一シヨンを行うことにより、 I RG27 mRN Aの発現の有無を検出することがで きる。 ノ、イブリダィゼ一シヨンの条件として 2本鎖 DNAをプローブとして用い る場合、 例えば 50% (v/v) ホルムアミド、 lMNaC l、 10% (w/v) デキ ストラン、 1% (wZv) SDS、 100 μ g/m 1サケ精子 DNAの条件で 42°C 、 16-24時間ハイブリダイズさせた後に、 2 X S S C中で室温、 10分間 2回 洗浄し、 更に 60°C、 2XSSC、 1%SDS中で 20分間 2回洗浄するような条 件が挙げられる。 In addition, the ability to make a diagnosis is also possible by using the in situ PCR method (Fernandez et al., Mol. Carcinog, 20, 317-326, 1997). As a specific method of the diagnosis by Northern plot of 2), for example, the following method can be used. First, the single-stranded or double-stranded DNA of the present invention is labeled; Prepare and use this as a diagnostic reagent Double-stranded DNA, for example, 32 P-labeled PCR reaction product prepared by the method described in 1) above, using the nick translation method or the random prime labeling method. Next, total RNA or poly (A) RNA is prepared from the subject's fibrous cells, blood, urine, etc. by the same method as described above, and is subjected to formaldehyde gel electrophoresis and DNA digestion by a conventional method. By performing blotting on the membrane, hybridization of the membrane with the probe can detect the presence or absence of expression of IRG27 mRNA. When using double-stranded DNA as a probe, for example, 50% (v / v) formamide, 1M NaCl, 10% (w / v) dextran, 1% (wZv) SDS, 100 μg / m1 salmon After hybridizing at 42 ° C for 16-24 hours under sperm DNA conditions, wash twice in 2XSSC at room temperature for 10 minutes, and then wash twice in 60 ° C, 2XSSC, 1% SDS for 20 minutes. Such conditions are mentioned.

さらに、 DN Aチップを用いた診断も可能である。 すなわちまず、 DNAチップ上 で本発明の DN Aを合成する。 次に、 纖用の繊 '細胞や血液、 尿などより全 RN A又 ( ポリ (A) RNAを調製し、 これを蛍光等でラベルする。 そして、 この両者を ノ、イブリダィズさせて DNAチップ上の蛍光を検出することなどにより、 癌の診断を 行うことが 能である。 ここで、 本発明の DNAやポリヌクレオチドを結合させた D NAチップは、 米国ァフィメトリックス社に注文することにより入手可能であり、 ま た、 前記した診断法の個々の具体的な手段については、 Nature Genetics, 21, 1-60(19 99)等を参考にして行うことカできる。  Furthermore, diagnosis using a DNA chip is also possible. That is, first, the DNA of the present invention is synthesized on a DNA chip. Next, total RNA or (poly (A) RNA is prepared from fiber cells, blood, urine, etc. for fiber, and this is labeled with fluorescence or the like. It is possible to diagnose cancer by detecting the fluorescence of DNA, etc. Here, the DNA chip to which the DNA or polynucleotide of the present invention is bound can be obtained by ordering from Affymetrix in the United States. It is possible, and individual specific means of the above-mentioned diagnostic method can be performed with reference to Nature Genetics, 21, 1-60 (1999) and the like.

なお、 該プライマーおよびプローブによる検出 診断のみならず、 組織の i n s i t u hyb r i d i z at i onにも応用される。  In addition, the present invention is applied not only to detection and diagnosis using the primers and the probe, but also to tissue tissue hybridazion of tissue.

以 ± ベた DNAは、 p 53の不活化により 誘導される遺伝子由来のものであ る 、 P 53の不活化により魏力柳制される遺伝子由来の DNAもまた、 同様の癌 の診断薬として利用することができる。 ここで p 5 3の不活化により発現力柳制さ れる遺伝子は、 前記工程 Cのディファレンシャルディスプレイにおいて p 5 3の不 活化特異的に発現力柳制される遺伝子を検出すること以外は全く同様の工程 A〜Eを 経ることにより、 クロ一ニンク"すること力できる。 このようにして見出された新規な 遺伝子の部分配列を、 配列番号: 3 0〜配列番号: 1に示す。 Hereafter, the solid DNA is derived from a gene induced by inactivation of p53.DNA derived from a gene regulated by inactivation of P53 is also a similar cancer. It can be used as a diagnostic agent for Here, the genes whose expression is controlled by the inactivation of p53 are exactly the same except that the gene whose expression is specifically controlled by the inactivation of p53 is detected in the differential display in the step C. By going through steps A to E, it is possible to “close”. The partial sequence of the novel gene thus found is shown in SEQ ID NO: 30 to SEQ ID NO: 1.

なお、 本明細書において開示された配列番号: 1 4〜配列番号: 2 9は p 5 3の不 活化によリ発現力誘導される DNA群であり、 配列番号: 3 0〜配列番号: 4 1は p 5 3の不活化により発現力 ¾1制される D NA群である。 これらはいずれも新規な DN Aであり、 該塩基配列を含有する遺伝子もまた、 本発明の菌に含まれる。  In addition, SEQ ID NO: 14 to SEQ ID NO: 29 disclosed herein are a group of DNAs whose expression is induced by inactivation of p53, and SEQ ID NO: 30 to SEQ ID NO: 4. 1 is a group of DNAs whose expression is regulated by inactivation of p53. These are all novel DNAs, and a gene containing the nucleotide sequence is also included in the bacterium of the present invention.

本発明において抗体と 前記した本発明の遺伝子によりコードされるポリべプチ ド (以下、 本発明のポリペプチドと称する場合もある) を特異的に認識する抗体であ る。 すなわち、 (a) 癌抑制因子 p 5 3の不活化により発現が誘導され、 ( b ) 正常 と比較して癌 ,において発現の上昇力 S認められる、 という を有する遺伝子 によリコ一ドされるポリペプチドを特異的に認識する抗体である。 具体的に 配列 番号: 1 4〜酉己列番号: 2 9いずれか記載の塩基配列を含有する遺伝子によりコード されるポリペプチドを特異的に認識する抗体力挙げられ、 より好ましく 配列番号 : 1に記載のアミノ酸配列よりなるヒト I RG 2 7、 配列番号: 2に記載のアミノ酸 配列よりなるマウス I RG 2 7、 又はそのアレル変異体を特異的に認識する抗体が挙 げられる。  In the present invention, the antibody specifically recognizes the antibody and the polypeptide encoded by the above-described gene of the present invention (hereinafter, sometimes referred to as the polypeptide of the present invention). That is, (a) expression is induced by inactivation of the tumor suppressor p53, and (b) the expression is increased in cancer S compared to normal. An antibody that specifically recognizes a polypeptide. Specifically, an antibody capable of specifically recognizing a polypeptide encoded by a gene containing the nucleotide sequence described in any one of SEQ ID NO: 14 to NO: 29 is more preferable. SEQ ID NO: 1 Antibodies specifically recognizing human IRG27 comprising the amino acid sequence described, mouse IRG27 comprising the amino acid sequence represented by SEQ ID NO: 2, or an allelic variant thereof.

これら抗体の作製は、 例えば Antibodies; A Laboratory Manual, Lane,H. D.ら編 、 Cold Spring Harbor Laboratory Press (1989), 新細胞工学^^プロトコ一ル、 秀 潤社 (1993) などに記載の方法により容易に作製される。 すなわち、 本発明のポリべ プチド又はその一部を免疫原に用いて常法によリ適宜動物を免疫することにより、 本 発明の抗体を作製することができる。  These antibodies can be easily prepared by the method described in, for example, Antibodies; A Laboratory Manual, Lane, HD et al., Cold Spring Harbor Laboratory Press (1989), New Cell Engineering ^^ Protocol, Shujunsha (1993), etc. Produced. That is, the antibody of the present invention can be produced by appropriately immunizing an animal by a conventional method using the polypeptide of the present invention or a part thereof as an immunogen.

ここで免疫原として (A) 本発明のポリペプチド、 (B ) 該ポリペプチドと G S T等との融合タンパク、 (C) 該ポリペプチドの一部よりなるオリゴペプチドと K L H等とのコンジュゲート、 などカ举げられる。 前記 (A) のポリペプチド 適当な発現べクタ一に本発明の遺伝子を挿入し、 これを大腸菌もしく (お音養細胞株に導入し、 これらの形質転換体より常法によリ当 該ポリペプチドを大量に調製、 精製することにより得ること力できる。 また前記 (B ) の融合タンパク 例え ί鉢発明の遺伝子を pGEX— 6 P— 1 (フアルマシア) 等の GST融合タンパク発現べクタ一に導入し、 これを大腸菌に導入して形質^体 を得、 その後常法により菌体を破砕、 融合タンパクを抽出して、 ダルタチオンセファ ロース 4B (フアルマシア) 等により精製を行うことにより、 得ることカできる。 ま た前記 (C) のコンジユゲートは、 オリゴペプチド合成後、 :《ゃ83八タンパク 質と混合することにより得ることカできる。 I RG27における該コンジュゲートの 具体例として 配列番号: 1に記載のアミノ酸配列の第 104位〜 127位の部分 よりなる I RG27— A、 第 131位〜 153位の部分よりなる I RG27— B、 第 159位〜第 181位の部分よりなる I RG27— Cの各々を KLHにコンジュゲ一 トしたものが挙げられる。 特に I RG27— C力好ましい。 Here, as the immunogen, (A) the polypeptide of the present invention, (B) a fusion protein of the polypeptide with GST, etc., (C) a conjugate of an oligopeptide comprising a part of the polypeptide with KLH, etc. I can do it. The polypeptide of the present invention (A) is inserted into an appropriate expression vector, and the gene of the present invention is inserted into Escherichia coli or (Ono-cultured cell line). The polypeptide can be obtained by preparing and purifying the polypeptide in large quantities, and the fusion protein of the above (B), for example, the gene of the invention of the present invention can be added to a GST fusion protein expression vector such as pGEX-6P-1 (Pharmacia). This is introduced into Escherichia coli to obtain a transformant, followed by disruption of the cells by a conventional method, extraction of the fusion protein, and purification by daltathione Sepharose 4B (Pharmacia) or the like. In addition, the conjugate of the above (C) can be obtained by mixing with oligoprotein after synthesis of the oligopeptide: << Specific examples of the conjugate in RG27 IRG27-A consisting of the portion from position 104 to position 127 of the amino acid sequence described in SEQ ID NO: 1, I RG27-B consisting of the portion from position 131 to position 153, from the portion from position 159 to position 181 Each of the following I RG27-C is conjugated to KLH.

免疫感作する動物種として ゥサギ、 マウス、 ラット、 ニヮトリ、 ゥシ、 ロバ、 ヒッジ、 ゥマ ^れでも良く、 また、 当該ポリペプチドを特異的に認識する抗体であ れば、 ポリクロ一ナル抗体もしくはモノクローナル抗体の何れでも良い。 撤清より 精製抗体を得るために 常法によリアフィニティ一精製を行えば良い。 灘体の具 体例としては、 配列番号: 1に記載のヒト I RG 27のアミノ酸配列の第 159位〜 第 181位の部分よりなる I RG 27—Cにタ る抗体が挙げられる。  The animal species to be immunized may be a rabbit, a mouse, a rat, a chicken, a rabbit, a donkey, a hidge, a rabbit, or a polyclonal antibody if the antibody specifically recognizes the polypeptide. Alternatively, any of monoclonal antibodies may be used. In order to obtain a purified antibody from the elimination, it is sufficient to carry out rear affinity purification by a conventional method. Specific examples of the Nada body include an antibody corresponding to I RG 27-C comprising the portion of the amino acid sequence of human I RG 27 shown in SEQ ID NO: 1 from position 159 to position 181.

以上のようにして得られた抗体をもとに、 種々の抗体フラグメントを作製すること も可能である。 体フラグメントとは、 例えば抗体のペプシン消化によつて^^さ 辱る F(ab')2フラグメント、 F(ab')2フラグメントのジスルフイド結合を還元する ことによって^^され得る Fab'フラグメント、 および抗体をパパインおよび還元剤で することによって^ Kさ ί辱る 2Fabまた iiFabフラグメント等力挙げられ、 これ らのフラグメントも本発明の範疇に含まれる。 Various antibody fragments can also be prepared based on the antibodies obtained as described above. The body fragments, such Yotsute pepsin digestion ^^ of辱Ru F (ab ') antibody 2 fragments, F (ab') 2 Fab 'fragments which can be ^^ by reducing the disulfide bonds of the fragment, and The use of papain and a reducing agent to transform antibodies into 2K Fab and iiFab fragments, which are humiliated, is also included in the scope of the present invention.

さらに、 これらの抗体または抗体フラグメントをもとに、 種々の誘 « ^を作製する ことも可能である。 ここで誘^と { 例えばキメラ抗体、 擬人化抗体が挙げられ、 l¾¾体 例えば特開昭 6卜 47500、 Nature, , 522(1986)等に記載の方法に準じて 作製することができる。 また、 前言 体また (滅体フラグメントを酵素等で標識し たものも、 当 の範疇に含まれる。 具体的な酵素標識法として 例えばダル タルアルデヒド法、 過ョーソ法、 マレイミド法、 及びピリジル ·ジスルフイド法力举 げられる。 標識に用いられる酵素としては、 例えばゥシ小腸-アルカリフォスファタ —ゼ、 西洋ヮサビ 'ペルォキシダ一ゼなどカ举げられる。 これらの標識抗体 例え ( 酵素免疫測定法、 医学書院 (1978) 等の基本書に従い、 当業者ならば容易に作製 すること力 きる。 さらに、 前言 am体また 体フラグメントをピオチン化したもの も、 当該誘導体の範疇に含まれる。 Further, various types of antibodies can be prepared based on these antibodies or antibody fragments. Here are the invitations {{for example, chimeric antibodies, humanized antibodies, l-body For example, it can be prepared according to the method described in JP-A-6500 / 47, Nature, 522 (1986). Also included in the category are those in which the antecedent or the dead fragment is labeled with an enzyme or the like. Specific enzyme labeling methods include, for example, the daltaraldehyde method, the perioso method, the maleimide method, and the pyridyl disulfide. Enzymes used for labeling include, for example, small intestine-alkaline phosphatase, horseradish peroxidase, etc. These labeled antibodies, for example (enzyme-linked immunosorbent assay, Medical Shoin ( Those skilled in the art will be able to easily prepare them according to basic textbooks such as 1978), etc. Further, those obtained by biotinylation of the above-mentioned am isomer or body fragment are also included in the category of the derivative.

以上のような本発明の抗体、 抗体フラグメント、 またはこれらの誘 癌の診 断薬として利用すること力 きる。 本発明の代表的なタンパクである I RG 2 7にお いて ノ一ザンブロッティングによる R N Aの検出の結果とウェスタンブロッティ ングによるタンパク質の検出の結果が良く一致していた。 従って前記 DNAと同様に 、 本発明の抗体、 抗体フラグメント、 およびこれらの誘 を、 癌の診断薬として利 用することができる。 具体的には、 本発明の抗体等を、 例えばゥシ血清アルブミン含 有リン 液 (PH7.0) 等の適当な■夜中に存在させることにより、 癌の診断薬 の有効成分とすることができる。 その際、 測定方法に応じて、 例えば磨素標識二次抗 体、 発色剤、 発色補助剤、 停止液、 標準品等をも含有するキットの形態において使用 することが可能である。  It can be used as a diagnostic agent for the above-described antibodies, antibody fragments, or cancer-inducing cancers of the present invention. In the case of IRG27, a typical protein of the present invention, the results of RNA detection by Northern blotting and the results of protein detection by Western blotting were in good agreement. Therefore, similarly to the above-mentioned DNA, the antibody, the antibody fragment, and the derivative thereof of the present invention can be used as a diagnostic agent for cancer. Specifically, the antibody or the like of the present invention can be used as an active ingredient of a cancer diagnostic agent by allowing the antibody or the like of the present invention to be present in an appropriate medium such as serum albumin-containing phosphorus solution (PH7.0) at night. . At that time, depending on the measurement method, it can be used in the form of a kit containing, for example, a brush-labeled secondary antibody, a color former, a color former, a stop solution, a standard product, and the like.

本発明の診断薬を用いて免疫学的診断を行う方法として 例えば、 固开港繊. 細胞中の本発明のポリぺプチドの存在を検出する方法の他、 血液や唾液を含む体液又 ( 中の本発明のポリペプチドの存在を検出する方法が挙げられる。 すなわち、 ヒト 癌細胞に対して体内で細胞障害性 T細胞 (C T L) が誘導され、 該 C T L力 細胞を 傷害し、 その結果、 癌細胞で特異的に発現している本発明のポリペプチドが血中や尿 中に放出されるため、 これら血液、 唾液又は尿中での検出力何能となる。  Examples of a method for performing an immunological diagnosis using the diagnostic agent of the present invention include, for example, solid-state fiber. In addition to a method for detecting the presence of the polypeptide of the present invention in cells, a bodily fluid containing blood or saliva or In other words, a method for detecting the presence of the polypeptide of the present invention can be mentioned, that is, cytotoxic T cells (CTLs) are induced in the body against human cancer cells, and the CTL cells are damaged, resulting in cancer. Since the polypeptide of the present invention, which is specifically expressed in cells, is released into the blood or urine, the polypeptide can be detected in blood, saliva or urine.

具体的な検出方法として 蛍雄 #¾、 ウェスタン'プロット法、 免疫沈降法、

Figure imgf000019_0001
画免疫測定法 (R I A) 、 麟免疫測定法 (E L I SA) などが 挙げられる。 特に、 血液や唾液を含む術夜や尿に含まれる該ポリペプチドを検出す る齢に 通常 EL I SAまたは RI A法力撮も簡便である。 これらの診断 いずれも酵素免疫測定法、 医学書院 (1978) 等の基本書に基づき容易に すること 力できる。 E L I S A法の場合、 1次抗体でプレートをコートし、 試料中に存在する I RG27を結合後 2嫌体と反応させ、 I RG 27に結合した抗体を検出すること 力簡便である。 また、 抗体カ¾¾識するェピトープに対するポリペプチドまたはオリゴ ペプチドを用いた競合阻害による測定も可能である。 Specific detection methods include fluorescent # ¾, Western 'plot, immunoprecipitation,
Figure imgf000019_0001
Immunoassay (RIA), Lin immunoassay (ELI SA), etc. No. In particular, normal ELISA or RIA imaging at the operative night including blood or saliva or at the age at which the polypeptide contained in urine is detected is also convenient. All of these diagnoses can be easily performed based on basic books such as enzyme immunoassays and the Medical School (1978). In the case of the ELISA method, it is simple and convenient to coat the plate with a primary antibody, bind the IRG27 present in the sample, and react with the two isotopes to detect the antibody bound to the IRG27. In addition, it is also possible to perform measurement by competitive inhibition using a polypeptide or an oligopeptide for an epitope detected by an antibody.

以下、 I RG27を用いた E L I S A法の具体例につき説明する。  Hereinafter, a specific example of the ELISA method using IRG27 will be described.

まず 1次抗体として、 抗 I RG27A I gG ( I RG 27— A部分に文 tる抗体 ) 又は抗 I RG27B I gG ( I RG27— B部分に対する抗体) をプレートに吸 着させ、 次いで、 癌患者の尿 (採取後、 遠心し上清を集めたもの) を反応させる。 そ の際、 陽性およひ 性対照についても同様の醒を施す。 次いで 2次抗体として、 ビ ォチンィ kMl RG27C I gG (I RG27— C部分に ¾f "る抗体) を反応させ、 ペルォキシダ一ゼ標識ストレブトアビジンと反応させた後、 発色反応を行うことによ リ、 I RG27を検出すること力できる。 また、 前記抗 I RG27C I gGを直接 ペルォキシダーゼやアル力リ性フォスファターゼ等によって酵素標識したものを用い ることにより、 同様の検出を行うことも可能である。  First, as a primary antibody, anti-I RG27A IgG (an antibody described in the I RG27-A portion) or anti-I RG27B IgG (an antibody against the I RG27-B portion) is adsorbed on the plate, and then a cancer patient Of urine (collected supernatant after collection). At that time, the same awakening is performed for the positive and sexual controls. Subsequently, as a secondary antibody, biotin kMl RG27C IgG (an antibody that binds to the IRG27-C moiety) is reacted with peroxidase-labeled streptavidin, followed by a color reaction. The same detection can be performed by using the anti-IRG27C IgG directly labeled with enzyme such as peroxidase or alkaline phosphatase.

なお、 繊又〖細胞を用いた抗体診断で 々の固藤を診断することか 能であ リ、 血液や唾液等の体液または尿を用いた抗体診断で 固开^ Sや白血病を含む種々 の癌を診断することが可能である。 本発明の診断方法は特に、 腎癌、 尿管癌、 膀胱癌 や尿 の診断に対して有効に使用される。 図面の簡単な説明  It should be noted that it is possible to diagnose various solids by antibody diagnosis using fiber cells, and various antibodies including solid ^ S and leukemia by antibody diagnosis using body fluids such as blood and saliva or urine. It is possible to diagnose cancer. The diagnostic method of the present invention is particularly effectively used for the diagnosis of renal cancer, ureteral cancer, bladder cancer and urine. BRIEF DESCRIPTION OF THE FIGURES

図 ベクターのみを導入した HEL 299細胞 (図中 VECTOR) 、 及び実 施例 1で作製した 3種の変異型 p 53及び欠失型 p 53プラスミドを導入した HE L 299細胞 (図中 175 H、 248W、 273 H及び 302-393) においてディ ファレンシャルディスプレイを行った結果を示す電気泳動写真である。 矢印のバンド がフラグメント 27に相当する。 Figure HEL 299 cells (VECTOR in the figure) transfected with the vector alone, and HEL 299 cells (175H, 175H in the figure) transfected with the three mutant p53 and deletion p53 plasmids prepared in Example 1. 248W, 273H and 302-393) are electrophoretic photographs showing the results of differential display. Arrow band Corresponds to fragment 27.

図 2 ベクター導入細胞と 3種の変異型 p 53及び欠失型 p 53プラスミド導 入細胞における I RG27遺伝子の発 を RT— PCRにより検出した結果を示す 電気泳動写真である。 図中下段に コントロールとして G3PDHを用いて同様の 実験を行った結果を示す。 I RG 27は 22サイクル、 G3PDHは 20サイクル の P C R産物を電気泳動に供した。  FIG. 2 is an electrophoresis photograph showing the results of RT-PCR detecting the expression of the IRG27 gene in a vector-transfected cell and three types of mutant p53- and deletion-type p53 plasmid-transfected cells. The lower part of the figure shows the results of a similar experiment using G3PDH as a control. IRG27 was subjected to electrophoresis of 22 cycles of the PCR product and G3PDH was subjected to 20 cycles of the PCR product.

図 3 ヒト正常繊における I RG27遺伝子の発現をノーザンブロット騰し た結果を示す電気泳動写真である。 a, b, cの R N Aプロットはそれぞれ C 1 o n t e c h社の Mu 1 t i 1 e T i s s u e No r t he rn B l o tの a : H uman、 b : Human I I、 c : H u m a n I mm u n e S y s t e mを使 用した。 矢印が I RG27のシグナルの位置を示している。  FIG. 3 is an electrophoretic photograph showing the result of Northern blotting of the expression of the IRG27 gene in normal human fibers. The RNA plots for a, b, and c were obtained using a: Human, b: Human II, and c: Human Immune System of MuOnti eT issue Nort B rn B lot of C ontech, respectively. Used. The arrow indicates the position of the signal of IRG27.

図 4 ヒト各翻細胞株における I R G 27遺伝子の発現をノ一ザンブロット解 析した結果を示す電気泳動写真である。 C 1 o n t e c h社の Mu 1 t i p 1 e T i s s ue No r the rn B l o tの Human Canc e r Ce l l L i neを使用した。 図中 HL60は前 IS性白血病細胞株であり、 He Laは子宮穎部 癌細胞株であリ、 K 562は慢性髓性白血病細胞株であリ、 MOLT 4 急性リン パ芽球性白血病細胞株であリ、 Raj i (お一キットリンパ腫細胞株であリ、 S W4 80は; 細胞株であり、 A 549膽癌細胞株であリ、 G 361は悪' 色腫細 胞株である。 矢印が I RG27のシグナルの位置を示している。  FIG. 4 is an electrophoresis photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in each human cell line. Human Cancell e Cell Line of Mu 1 tip 1 e Tis ssue No r the rn B l o t of C 1 o n t e ch was used. In the figure, HL60 is a pro-IS leukemia cell line, He La is a cervical carcinoma cell line, K562 is a chronic medullary leukemia cell line, and MOLT 4 acute lymphoblastic leukemia cell line. Raj i (a one-kit lymphoma cell line, SW480; a cell line, an A 549 glutamic carcinoma cell line, and G 361 a malignant melanoma cell line. The arrow indicates the position of the signal of IRG27.

図 5 癌患者の腫瘍部 (図中 T) と非腫瘍部 (図中 N) における I RG27遺伝 子の発現をノーザンブロット,した結果を示す電気泳動写真である。 各レーンの上 に糸!^名を示した。  FIG. 5 is an electrophoretic photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in the tumor part (T in the figure) and non-tumor part (N in the figure) of the cancer patient. Threads are shown on each lane.

図 6 肺癌患者 4例の腫瘍部 (図中 T) と非腫瘍部 (図中 N) における I RG2 7遺伝子の発現をノ一ザンブロット麟斤した結果を示す電気泳動写真である。  FIG. 6 is an electrophoretic photograph showing the results of Northern blot analysis of the expression of the IRG27 gene in the tumor part (T in the figure) and the non-tumor part (N in the figure) of four cases of lung cancer patients.

図 7 抗 I RG27抗体を用いてウェスタンプロット鰣斤を行った結果を示す電 気泳動写真である。 電気泳動したサンプル DLD— 1細胞に I RG27発現べク ターを導入した安定形質転讓胞の細胞溶解液 (図中 I RG27のレーン) 、 及びべ クタ一のみを導入した安定形質転^ ffl胞の細胞溶解液 (図中ベクターのレーン) で ある。 抗 I RG27抗体として、 ァフィ二ティー精製前及びァフィ二ティ一精製後 の 3種の抗 I RG27抗体 (A— 2、 B— 2、 C-2) を用いた。 FIG. 7 is an electrophoretic photograph showing the result of Western blot analysis using an anti-I RG27 antibody. Electrolyzed sample DLD-1 cell lysate of stable transformed cells in which an IRG27 expression vector was introduced into cells (IRG27 lane in the figure) This is a cell lysate of a stable transformed ^ ffl cell transfected with only a vector (vector lane in the figure). As anti-IRG27 antibodies, three kinds of anti-IRG27 antibodies (A-2, B-2, C-2) before affinity purification and after affinity purification were used.

図 8 各種ヒト細胞株における I RG27の mRNA及びタンパク質の発現をノ 一ザンブロッティンク"及びゥエスタンプロッティングにより鹏斤した結果を示す電気 泳動写真である。 ウェスタンプロッティングに用いたタンパク質のクマシ一プリリァ ントブルーによる染色結果も、 併せて下段に示した。 図中 HEL299およひ *WI 3 8は正常肺 2倍#»隹芽細胞株であリ、 H e p G 2は肝癌細胞株であリ、 293は胎 児腎由来形質車云換細胞株であり、 H e L aは子宮穎部癌細胞株であリ、 S a o s— 2 は骨肉 Mffl胞株であり、 U 937 ( !^性リンパ腫細胞株であり、 R D 文筋腫 細胞株であリ、 T 24赚胱癌細胞株であリ、 S c a B E Rは膀胱癌細胞株であリ、 DLD- 1は大纏細胞株であり、 S W480は大腸癌細胞株であり、 Raj i ( 一キットリンノ翻胞株であり、 H E p— 2 iin因頭癌細胞株であり、 K U— 2は腎癌 細胞株である。  Fig. 8 is an electrophoresis photograph showing the results of Northern blotting and estamplotting of the expression of mRNA and protein of IRG27 in various human cell lines. Coomassie protein used for Western plotting The results of staining with Priluent Blue are also shown at the bottom of the figure, where HEL299 and * WI38 are normal lung 2-fold # »blast cells and HepG2 is a liver cancer cell line. 293 is a fetal kidney-derived plasma carcinoma cell line, He La is a cervical carcinoma cell line, Saos-2 is an osteosarcoma Mffl vesicle line, and U937 (! ^ Lymphoma). Cell line, RD myofioma cell line, T24 bladder cancer cell line, ScaBER is bladder cancer cell line, DLD-1 is a general cell line, SW480 Is a colorectal cancer cell line, Raj i (a kitlin follicular cell line, HE p-2 iin a head cancer cell line K U- 2 is a renal cancer cell lines.

図 9 抗 I RG27抗体を用いた EL I S A法による I RG27の検出を示すグ ラフである。 横軸に抗原である GST融合 I RG27タンパク質およびコントロール の GSTタンパク質の を示し、 縦軸に吸光度を示した。 GSTタンパク質に対し てのみ、 1 m g/m 1の検出抗体を用いた場合の測定値を示した。 発明を実施するための最良の形態  FIG. 9 is a graph showing detection of IRG27 by the ELISA method using an anti-IRG27 antibody. The abscissa indicates the values of the GST-fused IRG27 protein as an antigen and the control GST protein, and the ordinate indicates the absorbance. The measured values when the detection antibody of 1 mg / m1 was used only for the GST protein are shown. BEST MODE FOR CARRYING OUT THE INVENTION

以下、 例を挙げて本発明をさらに詳細に説明する力 本発明はこれらの ¾δδ例 によりなんら限定されるものではなレ、。  Hereinafter, the present invention will be described in further detail with reference to examples. The present invention is not limited to these examples of Δδδ.

麵例 1 麵 Example 1

変異型及び欠失型 Ρ 53発現プラスミドベクターの構築 Construction of mutant and deletion type Ρ53 expression plasmid vectors

以下の手 J噴により、 P 53のアミノ酸配列 (Mol. Cell. Biol., 7, p961 (1987)) 中 の第 175位がアルギニンからヒスチジンに変異したクローン、 第 248位がアルギ ニンからトリブトファンに変異したクローン、 第 273位がアルギニンからヒスチジ ンに変異したクローンを、 それぞ ti乍製した。 これらの変異は全て、 ヒトの癌で高 頻度に見出されている変異である (Nuc. Acid. Res.,25, pl51-157 (1997)) 。 In the amino acid sequence of P53 (Mol. Cell. Biol., 7, p961 (1987)), clone 175 was converted from arginine to histidine, and position 248 was changed from arginine to tributane. Mutated clone, No. 273: Arginine to Histige The clones which were mutated to the same were prepared. These mutations are all mutations frequently found in human cancers (Nuc. Acid. Res., 25, pl51-157 (1997)).

具体的には、 1. 9 Kbの正常型 p 53 c DNA遺伝子を含む p r o Sp 53 ( 静岡県立大学 ·根本清光先生より分与、 一般的には Japanese Cancer Research Reso urces Bankより D印 osit No. CO 104として入手可能) 、 または当該プラスミド中の E c oR lZB amH I切断断片に含まれる当該遺伝子を pB 1 u e s c r i p t I I一 SK ( + ) (Stratagene社製) に導入した p B S— p 53を錡型として、 p 53 のァミノ酸配列中の第 1 75位、 第 248位、 又は第 273位に変異が入るように設 定した 5' 側向き (175Hismut. : ATG ACG GAG GTT GTG AGG CAC TGC CCC CAT CAT G AG CGC TGC TCA GA、 248Trpmut. : TGC ATG GGC GGC ATG AAC TGG AGG CCT ATC CTC ACC ATC ATC ACA CT、 273Hismut.: GGA CGG AAC AGC TTT GAG GTA CAT GTT TGT GCC TGT CCT GGG AG) と 3' 側向きのプライマ一 (175HisA: TCT GAG CAG CGC TCA TGA T GG GGG CAG TGC CTC ACA ACC TCC GTC AT、 248TrpA: AGT GTG ATG ATG GTG AGG ATA GGC CTC CAG TTC ATG CCG CCC ATG CA、 273HisA: CTC CCA GGA CAG GCA C ACA TG T ACC TCA AAG CTG TTC CGT CC) 、 及び正常型 p 53遺伝子のオープンリ一ディング フレームの 3' 末端側 (p53tenn: GTT AAC TCG AGT CAG TCT GAG TCA GGC CCT TCT G TC TTG M) と 5' ¾ (p53Xho:GTT AAC TCG AGC CAC CAT GGA GGA GCC GCA GTC AGA TCC TAG CGT CGA GC) のプライマーとを用い、 以下のようにして P C R反応を行 つた。  Specifically, pro Sp 53 containing a 1.9 Kb normal p53 cDNA gene (provided by Dr. Kiyomitsu Nemoto, Shizuoka Prefectural University; generally, D-marked osit No. from Japanese Cancer Research Resources Bank) (Available as CO 104) or pBS-p53 in which the gene contained in the EcoRlZBamHI cut fragment in the plasmid was introduced into pBuescriptII-SK (+) (Stratagene). As a type, the 5 'side which was set so that the mutation was inserted at the 1st, 75th, 248th, or 273rd position in the amino acid sequence of p53 (175Hismut .: ATG ACG GAG GTT GTG AGG CAC TGC CCC CAT CAT G AG CGC TGC TCA GA, 248Trpmut .: TGC ATG GGC GGC ATG AAC TGG AGG CCT ATC CTC ACC ATC ATC ATC ACA CT, 273Hismut .: GGA CGG AAC AGC TTT GAG GTA CAT GTT TGT GCC TGT CCT GGG AG) 'Side-facing primer (175HisA: TCT GAG CAG CGC TCA TGA T GG GGG CAG TGC CTC ACA ACC TCC GTC AT, 248TrpA: AGT GTG ATG ATG GTG AGG ATA GGC CTC CAG TTC ATG CCG CCC ATG CA, 273HisA: CTC CCA GGA CAG GCA C ACA TG T ACC TCA AAG CTG TTC CGT CC) and 3 'end of open reading frame of normal p53 gene (p53tenn: GTT AAC TCG AGT CAG Using TCT GAG TCA GGC CCT TCT G TC TTG M) and 5'¾ (p53Xho: GTT AAC TCG AGC CAC CAT GGA GGA GCC GCA GTC AGA TCC TAG CGT CGA GC) primers, perform the PCR reaction as follows. I went.

第 1 75位のアミノ酸に変異力入った p 53遺伝子断片を得るため、 p 53Xh o プライマーと 1 75H i s Aプライマ一、 1 75H i smu tプライマーと p 53 t e rmプライマ一を用いて常法により PC Rを行い、 p 53の 5' 側 H域と 3' 側領 域の DN A断片を増幅させた。 次に、 ァガロース電気泳動にて目的の長さの DNA断 片を精製した。 得られた各々 2種の DNA断片及び p 53Xh oプライマーと p 53 t e rmプライマーを用いて、 常法により P C Rを行った。 増幅された DNA断片を 1 %ァガロースゲソ HI気泳動にかけ、 目的の長さの DN A断片を回収後、 Xh o Iで 切断し、 pB 1 u e s c r i p t I I SK ( + ) に導入した。 第 248位及び第 27 3位のアミノ酸に変異力 ^入った p 53遺伝子断片も、 対応するプライマーを用いて 前記と同様にして pB 1 u e s c r i p t I I SK ( + ) に導入した。 また、 正常 型 P 53 cDNAもオープンリーディングフレームの 3' ^側と 5' に Xh o I切断配列を加えたプライマ一 (それぞれ、 p 53 t e rmおよび p 53Xho) を用いて増幅し、 上記と同様にして pB 1 ue s c r i p t I I SK ( + ) に導入し た。 To obtain the p53 gene fragment with mutation at the amino acid at position 175, use the p53Xhoo primer and 175HisA primer, the 175Hismut primer and p53term primer in the usual manner. PCR was performed to amplify the DNA fragments in the 5 'H region and the 3' region of p53. Next, DNA fragments of the desired length were purified by agarose electrophoresis. PCR was performed by a conventional method using the obtained two types of DNA fragments, the p53Xho primer and the p53term primer. The amplified DNA fragment was subjected to 1% agarose Geso HI electrophoresis, and a DNA fragment of a desired length was recovered, cut with XhoI, and introduced into pB1uescript II SK (+). 248th and 27th The p53 gene fragment having a mutation at the amino acid at position 3 was also introduced into pB1uescript II SK (+) using the corresponding primer in the same manner as described above. The normal P53 cDNA was also amplified using primers (p53te rm and p53Xho, respectively) with XhoI cleavage sequences added to the 3 'and 5' sides of the open reading frame, and And introduced it into pB 1 ue script II SK (+).

得られた各クローンについて塩基配列を謝斤した結果、 第 175位に変異カ つた クローンの DN Aは 5' 側が約 200 b p欠失しており、 また第 248位、 第 273 位に変異力 i '入ったクローンの DN Aは 5' 側力各々 29b p欠失したものであった。 そこで、 p 53遺伝子内に含まれる N c o I切断部位を利用して正常型 P 53遺伝子 の 5' 側領域部分を連結し、 目的とする各変異型 P 53遺伝子を得た。  As a result of analyzing the nucleotide sequence of each of the obtained clones, the DNA of the clone mutated at position 175 had a deletion of about 200 bp at the 5 'side, and the mutation potential at positions 248 and 273 was i. The DNA of the clone containing the DNA had a deletion of 29 bp each on the 5 'side. Therefore, the 5′-side region of the normal P53 gene was ligated using the NcoI cleavage site contained in the p53 gene to obtain each mutant P53 gene of interest.

以上のような変異型 P 53遺伝子の他に、 p 53の ドメイン (核移行、 四量 体形成、 非特異的一本鎖 DNA結合ドメインが存在) のみよりなる欠失型 p 53遺伝 子も作製した。 すなわち、 p 53のアミノ酸配列の第 302位の前に ATGを含む領 域のプライマー (pMINI: GTT AAC TCG AGC CAC CAT GGG GAG CAC TAA GCG AGC ACT GCC CM C CA) を設定し、 該プライマーと、 正常型 p 53遺伝子のオープンリ一 デイングフレームの 3' のプライマ一 (p53terra) とを用いて P C Rを行った。 上記と同様に得られた断片を pCAGGS (Gene, 108, pl93-200 (1991)) に組み込み 、 目的のクローンを 13種得た。 その中の 1種の塩基配列を決定した結果、 目的のク 口一ンであること力键認された。  In addition to the mutant P53 gene as described above, a deleted p53 gene consisting only of the p53 domain (nuclear translocation, tetramer formation, non-specific single-stranded DNA binding domain) is also produced. did. That is, a primer (pMINI: GTT AAC TCG AGC CAC CAT GGG GAG CAC TAA GCG AGC ACT GCC CM C CA) in the region containing ATG is provided before the amino acid sequence of p53 at position 302. PCR was performed using the 3 ′ primer (p53terra) of the open reading frame of the normal p53 gene. The fragment obtained in the same manner as described above was incorporated into pCAGGS (Gene, 108, pl93-200 (1991)) to obtain 13 target clones. As a result of determining the base sequence of one of them, it was confirmed that it was the desired target.

以上のようにして得られた変異型 P 53 DNAを含む pB 1 u e s c r i p t I I組換えべクタ一及び欠失型 P 53 DNAを含む pCAGGS糸雄えベクタ一を X 1101で¾1断し、 インサート DNAを分離した。 これらインサート DNAを p SV2 — b s r (禾^ f製薬社) のブラストサイジン S耐性遺伝子 (b s r) 発現ユニットを 含む Pvu I I— Ec oR I DNA断片を p C AGG Sベクターの S a 1 I膽へ 挿入して作製した pCAGGS— b s rの Xho I部位にそれぞれを導入した。 得ら れたクローンのうち 175アミノ酸残基がアルギニンからヒスチジンに変異したクロ —ンを pCAGGS— b s r— 175H、 248アミノ酸残基がアルギニンがトリ プトファンに変異したクローンを pCAGGS— b s r— 248W、 273ァミノ 酸残基がアルギニンがヒスチジンに変異したクローンを P CAGGS— b s r— 27 3H、 302〜393アミノ酸残基部分よりなる欠失型 p 53クローンを pCAGG S— b s r— p 53— 302— 393と命名した。 その後、 これらのプラスミドで大 腸菌 (JM109, 東洋紡) を形質転換した。 例 2 The pB1uescript II recombinant vector containing the mutant P53 DNA and the pCAGGS thread male vector containing the deleted P53 DNA obtained as described above are cut at X1101 to cut the insert DNA. separated. Insert these insert DNAs into Pvu II—EcoR I DNA fragment containing the blasticidin S resistance gene (bsr) expression unit of p SV2 — bsr (Health Pharmaceutical Co., Ltd.) into S a 1 I in a pCAGGS vector Each was introduced into the XhoI site of the inserted pCAGGS-bsr. In the clones obtained, 175 amino acid residues were mutated from arginine to histidine. PCAGGS— bsr— 175H, clone 248 amino acid residues arginine mutated to tryptophan pCAGGS— bsr—248W, 273 amino acid residue cloned arginine to histidine P CAGGS— bsr—273H The deletion p53 clone consisting of 302 to 393 amino acid residues was named pCAGG S-bsr-p53-302-393. Subsequently, Escherichia coli (JM109, Toyobo) was transformed with these plasmids. Example 2

形質転^ ffl胞の作製と RNA調製 Preparation of transformed ^ ffl vesicle and RNA preparation

3種の変異型 p 53プラスミド (pCAGGS— b s r— 175H、 pCAGGS — b s r— 248W、 pCAGGS— b s r-273H) 及び欠失型 p 53プラスミ ド (pCAGGS— b s r— p 53— 302— 393) をそれぞれ 200 gずつ、 0. 4mlの PBS (-) に懸濁したエレクトロボレ一ター S SH— 10 (島 ^^器 社製) を用いて 2. 2x 106のヒト正常肺 2ί^«|芽細胞 (HEL 299細胞、 大日本製薪土) にエレクト口ポレーシヨンにより導入した。 印加条件は 300 V、 0 . 75 kV/cm, ノ レス幅 1000 μ s、 ノ^レス数 6回で行レ、、 24時間後に 2 μ g/m 1のブラストサイジン Sを添加した培養液で選択した。 選択開始 5日後以降の 生き残った形質転删胞を回収した。 なおコントロールとして、 ベクタ一 (pCAG GS-b s r ) を導入した同様の細胞も調製した。 Three mutant p53 plasmids (pCAGGS-bsr-175H, pCAGGS-bsr-248W, pCAGGS-bsr-273H) and deletion p53 plasmid (pCAGGS-bsr-p53-302-393), respectively 2.2 × 10 6 human normal lung 2ί ^ «| blast cells using an electroporator S SH-10 (manufactured by Shima ^^ Instruments) suspended in 0.4 ml of PBS (-), 200 g each (HEL 299 cells, firewood made by Dai Nippon) by electroporation. The application conditions were 300 V, 0.75 kV / cm, a pulse width of 1000 μs, the number of pulses was 6 times, and a culture solution containing 2 μg / m 1 blasticidin S 24 hours later Was selected. After 5 days from the start of selection, surviving transformed cells were collected. As a control, similar cells into which vector-1 (pCAG GS-b sr) was introduced were also prepared.

175アミノ酸残基目に変異の入った p 53遺伝子 (pCAGGS— b s r- 17 5H) 及び欠失型 p 53遺伝子 (pCAGGS— b s r-p 53-302-393) を導入した細胞では、 ベクタ一 (pCAGGS— b s r ) を導入したコントロール 細胞と比べて細胞分裂の強い維持力職された。 一方、 248、 273アミノ酸残基 目に変異が入った P 53遺伝子 (pCAGGS— b s r— 248W、 pCAGGS— b s r-273H) を導入した細胞も、 コントロール細胞よりも細胞 の維持が高 レ 頃向であった。  In cells into which the p53 gene (pCAGGS-bsr-175H) with a mutation at the 175 amino acid residue and the deleted p53 gene (pCAGGS-bsrp53-302-393) have been introduced, the vector (pCAGGS — Compared to control cells transfected with bsr), the cells were able to maintain cell division more strongly. On the other hand, cells transfected with the P53 gene (pCAGGS-bsr-248W, pCAGGS-bsr-273H) with mutations at 248 and 273 amino acid residues are more likely to maintain cells than control cells. there were.

また、 これら変異型及び欠失型 P 53遺伝子を導入した細胞で 53に财る 抗体を用いたウェスタンブロット鹏斤により、 導入した遺伝子よリ産生されたと考 えられるタンパク質力 ¾i¾に していること力 認された。 In addition, 53 cells have been introduced into these mutant and deleted P53 genes. Western blot analysis using an antibody confirmed that the protein strength {i}, which is considered to have been produced by the introduced gene, was obtained.

以上の鹏斤結果よリ、 変異や欠失を導入した P 53遺伝子の i ¾発現によリ H E L 299細胞の中で正常な p 53の機能カ^;不活化され、 その結果、 細胞分裂の麟が引 き起こされたこと力考えられた。  From the above results, normal p53 function was inactivated in HEL 299 cells by i¾ expression of the P53 gene into which the mutation or deletion had been introduced. It was thought that Rin was aroused.

その後、 回収した形質転換細胞に 0. 5%NP— 40、 1 OmM T r i s— HC 1 (pH8. 6) 、 14 OmM NaC l、 1. 5mM MgG l 2、 1000UZ m l RNa s e i nh i b i t o rをカロえ、 懸濁後遠心によリ上清を回収し、 等 量の 0. 2M T r i s -HC 1 (PH7. 5) 、 2% SDS、 25mM EDT A、 0. 3M NaC l、 200 β g/m 1 P r o t e i n a s e Kを加え、 37 °Cで 30分加温した。 等量のフエノール:クロ口ホルム:イソアミルアルコール (2 5 : 24 : 1 ) を加えて抽出後、 エタノール ¾«5にて全 RNAを回収し、 以下の^ に用いた。 鍾例 3 Thereafter, the recovered transformed cells 0. 5% NP- 40, 1 OmM T ris- HC 1 (pH8. 6), 14 OmM NaC l, Karoe a 1. 5mM MgG l 2, 1000UZ ml RNa sei nh ibitor the re supernatant by the suspension after centrifugation was collected, equal amounts of 0. 2M T ris -HC 1 (P H7. 5), 2% SDS, 25mM EDT a, 0. 3M NaC l, 200 β g / m 1 Proteinase K was added, and the mixture was heated at 37 ° C. for 30 minutes. After adding and extracting an equal amount of phenol: chloroform: isoamyl alcohol (25: 24: 1), total RNA was recovered with ethanol-5 and used in the following procedure. Imperial example 3

ディファレンシャルディスプレイ法による P 53不活化細胞特異的発現遺伝子の選別 G e nHu n t e r社の RNAm a p k i t A〜Dのプロトコ一ルに従レ、、 実 施例 2で得られた形質転換細胞由来の全 RNAを铸型として RT反応を行った。 次い で、 計 80通りの全てのプライマ一セットを用いて PC Rを行った。 PCR反応 P e r k i n E 1 m e r社製の G e n e Am p PCR s y s t em 9600 を用い、 94°Cx 20 s e c -48°Cx 1 m i n - 72°Cx 30 s e cを 1 0サイク フレ、 94°Cx 20 s e c - 40°C 1 m i n- 72°Cx 30 s e cを 35サイクル行 い、 72°Cで 5m i n加熱後、 4 °Cに冷却した。 Selection of genes specific to P53-inactivated cells by differential display method Total RNA derived from the transformed cells obtained in Example 2 according to the protocol of RNAmapkits A to D from GenHunter. The RT reaction was carried out using the 铸 type. Next, PCR was performed using a total of 80 primer sets. PCR reaction Using GeneAmp PCR system 9600 manufactured by Perkin E 1mer, 94 ° Cx 20 sec -48 ° Cx 1 min-72 ° Cx 30 sec 10 cycles, 94 ° Cx 20 sec- 35 cycles of 40 ° C 1 min-72 ° C x 30 sec were performed, heated at 72 ° C for 5 min, and then cooled to 4 ° C.

熱 MSした P C R溶液を 6 %シークェンス変性ゲル (Lo n g Ran g e r 6 % p r e-m i x g e l ; FMC社) で電気泳動し、 JE乾固後に X線フィルム (B i o Max MR; Ko d ak社) を 2〜3日間感光させた。 オートラジオグ ラフィ一の結果を図 1に示す。 P 53不活化細胞特異的に出現する DN A断片の他に、 p 53不活化に伴って発 現が減少する DN A断片の検索も併せて行い、 ォ一トラジオグラムの目的のバンド と一致した乾固したゲル部分を切リ出した。 選別した各 D N A断片の各髓質繊細 胞における発現の強弱を表 1に示す。 切り出した各ゲル部分を 100 1の水に 10 分間浸した後 100°Cで 15分間加熱し、 遠心後、 上清に 50 gのダリコーゲンを 加えエタノール によって増幅産物を回収した。 回収された DNA溶液を用いて P CRにより再増幅し、 SUPREC— 02P艮外 ¾遠心チューブ(Tak a r a社 ) で DNA断片を精製後、 プラスミドベクタ一 pT7 B 1 u e (R) (Nov age n社) に挿入した。 The PCR solution subjected to the thermal MS was electrophoresed on a 6% sequence denaturing gel (Long Ranger 6% premix gel; FMC). After drying by JE, X-ray film (Bio Max MR; Kodak) was Exposure for ~ 3 days. Figure 1 shows the results of autoradiography. In addition to DNA fragments that appear specifically in P53-inactivated cells, we also searched for DNA fragments whose expression decreased with p53 inactivation, and matched the target band in the autoradiogram. The dried gel portion was cut out. Table 1 shows the strength of expression of each selected DNA fragment in each medullary cell. Each excised gel portion was immersed in 100 1 water for 10 minutes, heated at 100 ° C for 15 minutes, centrifuged, and 50 g of daricogen was added to the supernatant, and the amplification product was recovered with ethanol. Using the recovered DNA solution, re-amplify by PCR, purify the DNA fragment in a SUPREC-02P Gongai ¾ centrifuge tube (Takara), and use the plasmid vector pT7B1ue (R) (Nov age n ).

Figure imgf000028_0001
得られた 64種の断片を含むクローン群の塩基配列の決定を行い、 GenB an kZEMBL遺伝子データべ一ス (DNAS I S CD-ROM 033 ;日立ソ フトウェアエンジニアリング社) によってホモロジ一検索を行った結果、 新規あるい は公知の種々の遺伝子が同定された。 結果をまとめて表 2に示す。 表中の 「Nove 1」 力新規な遺伝子に相当する。 これら新規な遺伝子のうち P 53不活化細胞特異的 に出現する DN Aの塩基配列を配列番号: 14〜29に、 また p 53不活化に伴って 懇カ '減少する DNAの塩基配列を配列番号: 30〜配列番号: 41に記載した。 なお、 p 53の不活化によって発現力減少する遺伝子群の中に、 p 53によって遺 伝子の発現力%1導される p 21 WAF— 1力 ¾1別されていたことより (フラグメント 61に相当) 、 本発明で用いたディファレンシャルディスプレイの 件 P 5 3の不活化によって発現が上昇あるいは減少する遺伝子群を解斤するのに適したもの であると判断された。
Figure imgf000028_0001
The nucleotide sequence of the clone group containing the obtained 64 types of fragments was determined, and a homology search was performed using a GenBank ZEMBL gene database (DNAS IS CD-ROM 033; Hitachi Software Engineering Co., Ltd.). Various new or known genes have been identified. Table 2 summarizes the results. “Nove 1” in the table corresponds to a novel gene. Among these novel genes, the nucleotide sequence of DNA that appears specifically in P53-inactivated cells is shown in SEQ ID NOS: 14 to 29, and the nucleotide sequence of DNA that decreases with p53 inactivation is shown in SEQ ID NO: : 30 to SEQ ID NO: 41. In addition, among the gene groups whose expression level is reduced by the inactivation of p53, p21 WAF-1 is derived from p53 by the expression level of the gene by% 1. However, the differential display used in the present invention was determined to be suitable for unraveling genes whose expression increases or decreases due to inactivation of P53.

これらの DN A断片の中で p 53不活化細胞特異的に最も顕著に発; S±昇が認めら れたの ( フラグメント 27の DNAであった。 Among these DNA fragments, p53-inactivated cells were most prominent; S ± elevation was observed (DNA of fragment 27).

Fragment Homologous by Fragment size Homologous by Fragment Homologous by Fragment size Homologous by

Fragment No. SEQ ID No. Fragment No. SEQ ID No. to  Fragment No. SEQ ID No. Fragment No. SEQ ID No. to

size (bo) comouter search (bp) computer search  size (bo) comouter search (bp) computer search

1 14 197 Novel 2 34 208 Novel  1 14 197 Novel 2 34 208 Novel

5 15 335 Novel 8 21 139 Novel  5 15 335 Novel 8 21 139 Novel

6 16 254 Novel 9 107 myc related zinc finger mRNA  6 16 254 Novel 9 107 myc related zinc finger mRNA

10 30 111 Novel 12 35 206, 97 Novel , DAD  10 30 111 Novel 12 35 206, 97 Novel, DAD

11 326 T/A stretch8 14 22 111 Novel 11 326 T / A stretch 8 14 22 111 Novel

16 97 Ribosomal protein 12 19 36 208, 173 Novel , c-myc  16 97 Ribosomal protein 12 19 36 208, 173 Novel, c-myc

31 Λβ Novel rt j f wovei, lysu oxiaase  31 Λβ Novel rt j f wovei, lysu oxiaase

ert Na ATPase β-subunit  ert Na ATPase β-subunit

17 Novel I 9  17 Novel I 9

Novel iiiiiociionana gene, r 1  Novel iiiiiociionana gene, r 1

27-1 121 Novelb 31 23 175, 320 Novel, Phorbolin 1 27-1 121 Novel b 31 23 175, 320 Novel, Phorbolin 1

18 F27  18 F27

27-2 121 Novelb 35 24 313 Novel 27-2 121 Novel b 35 24 313 Novel

29 121 Novel- 36 187 KIAA  29 121 Novel- 36 187 KIAA

30c 338 p57kip2-XPC fuslond 37 155 a-tublin 30 c 338 p57kip2-XPC fuslon d 37 155 a-tublin

>290 T/A stretch* 38 25 89 Novel  > 290 T / A stretch * 38 25 89 Novel

32 258 Phorbolin I 41 96, 171 Rab 13, Cystathionine ^-synthase 32 258 Phorbolin I 41 96, 171 Rab 13, Cystathionine ^ -synthase

33 217 p57kip2 43 96, 153, 133 Rab 13,tFN-inducibte 56kDa,MHC 133 217 p57kip2 43 96, 153, 133 Rab 13, tFN-inducibte 56kDa, MHC 1

34 32 148 Novel 44 38 103 Novel 34 32 148 Novel 44 38 103 Novel

42 172 Rab13 46 39 307 Novel  42 172 Rab13 46 39 307 Novel

49 33 273 Novel 47 40 202 Novel  49 33 273 Novel 47 40 202 Novel

53 326 Signal recognition particle 9 50 41 264 Novel  53 326 Signal recognition particle 9 50 41 264 Novel

54 19 346 Novel 51 26 132 Novel  54 19 346 Novel 51 26 132 Novel

57 20 153 Novel 60 27 88 Novel  57 20 153 Novel 60 27 88 Novel

61 123 p21waf-1 62 59 IGF-BP5  61 123 p21waf-1 62 59 IGF-BP5

3C-1 28 209 Novel  3C-1 28 209 Novel

3C-2 29 232 Novel  3C-2 29 232 Novel

a) A/Tが連^した塩基配列 (art i f act) b)同一 fi伝子 27ニフラグメン卜 27) a) A / T base sequence (art if act) b) Same fi gene 27 difragment 27)

c) 338bp=6c I ones. >290bp=3c I ones d) art fact c) 338bp = 6c I ones.> 290bp = 3c I ones d) art fact

難例 4 Difficult case 4

27に対応する遺伝子の形質転換細胞での発現性の検討  Examination of the expression of the gene corresponding to 27 in transformed cells

27に対応する遺伝子が p 53不活化細胞において顕著に発¾±昇し ていることを確認するために、 以下の実験を行った。  The following experiment was performed to confirm that the gene corresponding to 27 was significantly increased in p53-inactivated cells.

P C Rによるフラグメント 27対応遺伝子の適切な増幅条件を検討するためのコン トロ一ルとして、 G 3 PDH遺伝子検出用の市販のプライマ一 (C I on t e ch社 製) を用いて、 各形質転換細胞全 RNAを錡型とし、 RT— PCRを行った。 プライ マーの 5' 末端を32 Pで標識し、 増幅のサイクル数を 16、 18、 20、 22回と 変ィ匕させた。 PCR溶液を電気泳動し、 増幅された DNA断片のシグナル強度を測定 した結果、 16から 22サイクルで何れの形質転換細胞を用いた場合でも、 G3PD Hの DNA断片カ 微増幅していること力示され、 RT— PCRに用いる全 RNAサ ンプルがほぼ等量であること力 認された。 Using a commercially available primer for G3PDH gene detection (manufactured by CIontech) as a control for examining the appropriate amplification conditions for the fragment 27-compatible gene by PCR, all the transformed cells were analyzed. Using the RNA as type II, RT-PCR was performed. The 5 'end of the primer was labeled with 32 P, and the number of amplification cycles was changed to 16, 18, 20, and 22 times. As a result of electrophoresis of the PCR solution and measurement of the signal intensity of the amplified DNA fragment, it was shown that the DNA fragment of G3PDH was microamplified in any of the transformed cells in 16 to 22 cycles. It was confirmed that the total RNA samples used for RT-PCR were almost equivalent.

フラグメント 27に対応する D N A酉己列を E S Tデータべ一スより見出し ( a c c e s s i on No. A A 150500及び a c c e s s i on No. A A 1567 04) 、 これらよリフラグメント 27に対応する遺伝子を特異的に検出できるプライ マ一配列を選定し、 同様の RT— PCRを行った。 18から 22までサイクソレ数を増 カロさせた場合、 対数増幅していること力示された。 用いたプライマ一 ( 下の通リで ある。  The DNA sequence corresponding to fragment 27 was found from the EST database (accession on No. AA 150500 and accession on No. AA 1567 04), and the primers that can specifically detect the gene corresponding to fragment 27 were used. The primary sequence was selected and the same RT-PCR was performed. When the number of cycles was increased from 18 to 22, the logarithmic amplification was shown. The primer used (see below).

(1) 5, 側のプライマ一配列: GCATGGCTGGGAGCGTGATGTGGT (配列番号: 6) (2) 3' 側のプライマ一配列: CTCTTGTGCAGGAGGCGCTCACTCAG (配列番号: 7) P 53不活化形質転換細胞から得られた全 RNAを錡型とした 22サイクルの増幅 を行った RT— PC Rの結果を図 2に示した。 何れの p 53不活化細胞においてもフ ラグメント 27対応遺伝子の発現の ®¾な上昇力認められた。 フラグメント 27に相 当する遺伝子を不死化関連遺伝子 I RG27と命名した。 難例 5 I RG27遺伝子の発現'! ¾の検討 (1) Primer sequence on the 5 side: GCATGGCTGGGAGCGTGATGTGGT (SEQ ID NO: 6) (2) Primer sequence on the 3 ′ side: CTCTTGTGCAGGAGGCGCTCACTCAG (SEQ ID NO: 7) Total RNA obtained from the P53-inactivated transformed cells Figure 2 shows the results of RT-PCR after 22 cycles of amplification of type III. In all the p53-inactivated cells, the expression of the fragment 27-corresponding gene was significantly increased. The gene corresponding to fragment 27 was named immortalization-related gene I RG27. Difficult case 5 I RG27 gene expression! Examination of ¾

I RG27全長の cDNAをクローニングするためのライブラリ一のソースを決 定するために、 ノーザンブロット解析によリヒト正常組 m¾び癌細胞株での I RG 2 To determine the source of the library for cloning the full-length cDNA of IRG27, Northern blot analysis was performed to determine the IRG2

7の発現性を検討した。 プローブとして用いる DNAを取得するため、 I RG27を 特異的に検出するプライマ一を用いて目的の DNA断片を増幅後、 pT7B 1 ue ( R) (No v a g e n¾) にクロ一ニングした。 プライマ一の塩基配列 ( 下の通リ である。 The expression of 7 was examined. In order to obtain DNA to be used as a probe, a target DNA fragment was amplified using a primer that specifically detects IRG27, and then cloned into pT7B1ue (R) (Novagen¾). The base sequence of the primer (see below).

(1) 5' 側のプライマ一配列: TGAGGGCGCAGAGGCAGGCAGCAT (配列番号: 8) (1) Primer sequence on the 5 'side: TGAGGGCGCAGAGGCAGGCAGCAT (SEQ ID NO: 8)

(2) 3' 側のプライマ一配列: CCGAGCTGTGTCCAAGCAGGCTGT (配列番号: 9) 増幅されクロ一ニングされた遺伝子断片 制限酵素で組換えプラスミドベクター から切り出し、 Pr ep A gene (B i oRad社) によって精製後、 Be a BEST DNAラベリングキット (Tak ar a社) を用いて [a— 32P] dCT Pにより標識し、 プローブとした。 (2) Primer sequence on the 3 'side: CCGAGCTGTGTCCAAGCAGGCTGT (SEQ ID NO: 9) Amplified and cloned gene fragment Cut out from the recombinant plasmid vector using a restriction enzyme and purified by Prep A gene (BioRad) , using be a BEST DNA labeling kit (Tak ar a company) labeled with [a- 32 P] dCT P, as a probe.

各 ¾Μ及び細胞由来の RN Aがブロットされたフィルタ一 C 1 o n t e c h 社よリ購入したものを用い、 常法によりノーザンプロット 斤を行った。 各種ヒト正 常糸 での発現性を検討した結果を図 3に示す。 末梢血白血球、 脾臓、 胸腺、 等 のリンパ系繊で I RG27の強レ、発現力認められた。 リンパ系繊以外の繊では 小腸で比較的強い発現力 忍められたが、 これ 小腸力 '独自の免疫繊 (リンパ球) を保有していることに起因しているとも考えられる。 以上の糸職を除くヒト正常 , では、 I RG 27は発現していないか、 発現していても極めて低い発 であった。 なお、 mRNAのサイズは 0. 9Kbであり、 1. 8Kb、 3Kb、 4. 5Kbの転 写産物も弱いながら検出された。  Northern blotting was carried out by a conventional method using a filter from which RNA derived from each cell and cells was blotted and purchased from C1onetech. Figure 3 shows the results of examining the expression in various human normal threads. Strong expression and expression of IRG27 were observed in lymphoid fibers such as peripheral blood leukocytes, spleen, and thymus. Fibers other than the lymphoid fiber were relatively strong in the small intestine, but this may be due to the small intestine's ability to possess its own immune fibers (lymphocytes). In normal humans except for the above-mentioned threadwork, IRG27 was not expressed, or even if it was expressed, the expression was extremely low. The size of the mRNA was 0.9 Kb, and transcripts of 1.8 Kb, 3 Kb, and 4.5 Kb were detected, though weakly.

各種ヒト癌細胞株での発現性を検討した結果を図 4に示す。 調べた殆どの癌細胞株 で発現が認められた。 特にリンパ腫由来の細胞株 (Raj i) で高頻度の発現が認め られ、 大 細胞株 ( SW480 ) や子宮頸纏細胞株 (HeLa) でも強い発現が 認められた。 さらに、 胎児肝糸職では発現カ¾かったのに対し、 成人肝での が極 めて低いという結果も得られた (図 3) 。 このことは、 I RG27遺伝子力 ¾5 マー 力一の CE Aと同様に癌ィ匕と密接に関わっていることを示唆するものである。 難例 6 Fig. 4 shows the results of examining the expression in various human cancer cell lines. Expression was observed in most of the cancer cell lines examined. In particular, high frequency expression was observed in a lymphoma-derived cell line (Raj i), and strong expression was also observed in a large cell line (SW480) and a cervical lining cell line (HeLa). Furthermore, the expression was high in the fetal liver thread, but extremely low in the adult liver (Fig. 3). This means that the IRG27 gene This suggests that, like Rikiichi CE A, he is closely related to Ganji-Dani. Difficult case 6

I RG27の全長 c DN Aのクロ一ニンク"  I RG27 full-length c DNA Cloning

上記の から、 I RG 27に対応する遺伝子は末梢血白血球で非常に高い発現が 認められたので、 ヒト白血球 cDNAライブラリ一 (G i b c o BRL社) を用い て I RG27 c DNAのスクリーニングを行った。 2. 7x l 06コロニーに対し て実施例 5で作製したプローブを用いてコロニーハイプリダイゼーシヨンを行った結 果、 3回のスクリ一二ングにより 8クローンが選別された。 From the above, the gene corresponding to IRG27 was found to have extremely high expression in peripheral blood leukocytes. Therefore, screening of IRG27 cDNA was performed using a human leukocyte cDNA library (Gibco BRL). 2. RESULTS subjected to colony High Priestess die See Chillon using the probes prepared in Example 5 to 7x l 0 6 colonies, 8 clones by three subscription-learning is selected.

1 Kbの挿入配列を有する I RG27— 3— 1、 I RG27— 4— 1、 I RG27 ー9一 1の 3つのクローンについて全塩基配列を決定した。 その結果、 3種のクロ一 ンが有する 181アミノ酸残基に対応するオープンリーディングフレーム部分は同一 であった。 しかしながら、 I RG27— 4— 1の開始コドンの 5' 上流部分 ί I R G27— 3— 1及び I RG27— 9— 1とは異なる配列であった。 クロ一ン I RG2 7— 3—1及び I RG27—4— 1に含まれる塩基配列を配列番号: 3及び 4に示し た。 また、 これらの塩基配列より推定されるアミノ酸配列を配列番号: 1に示した。 なお、 体 DNAを铸型とした PCRにより、 上記 DNAの配列の違い a 1 t e rnat i ve s p l i c i n gによって生じたものであること力予想、されて レヽる。  All the nucleotide sequences were determined for three clones, I RG27-3-1, I RG27-4-1, and I RG27-9-11, each having an insertion sequence of 1 Kb. As a result, the open reading frame portions corresponding to the 181 amino acid residues of the three clones were identical. However, the sequence 5 ′ upstream of the start codon of IRG27-4-1 was different from that of IRG27-3-1 and IRG27-9-1. The nucleotide sequences contained in the clones I RG27-3-1 and IRG27-4-1 are shown in SEQ ID NOs: 3 and 4. The amino acid sequence deduced from these nucleotide sequences is shown in SEQ ID NO: 1. It should be noted that PCR using body DNA as a type III is expected to be caused by the above-mentioned DNA sequence difference a 1 t rennativessplicnicg.

GenB ankZEMBL遺伝子データべ一ス (DNAS I S CD-ROM 0 35 ; 日立ソフトウェアエンジニアリング社) でホモロジ一検索した結果、 本発明の I RG 27のアミノ酸配列に対して 2アミノ酸残基の欠失力認められるポリぺプチド をコードする I SG20遺伝子 (a c c e s s i o n No. X89773 ; Go ngo r a C, e t a l. , J. B i o l. Che m. , 272, 19457— 19463, 1997) 、 及び、 本発明の I RG 27の c DNAに対し 2塩基の置換 力認められるがアミノ酸配列は同一である HEM45遺伝子 (ac c e s s i on No. U88964 ; Pen t e c o s t BT, J. S t e ro i d B i o c h em. Mo 1. B i o l. , 64, 25— 33, 1998) が見出された。 HEM 45の 5 ' 末聯頁域の塩基配列は、 I RG27— 3— 1タイプであることが明らか となった。 As a result of a homology search using the GenBankZEMBL gene database (DNAS IS CD-ROM 035; Hitachi Software Engineering Co., Ltd.), a deletion ability of 2 amino acid residues was found in the amino acid sequence of IRG27 of the present invention. ISG20 gene encoding a polypeptide (accession No. X89773; Gonorra C, et al., J. Biol. Chem., 272, 19457— 19463, 1997), and the I RG of the present invention HEM45 gene (accession on No. U88964; Pentecost BT, J. Steroid id Biochi) em. Mo 1. Biol., 64, 25-33, 1998). It was revealed that the nucleotide sequence of the 5'-end page region of HEM45 was of type IRG27-3-1.

以上のように I RG27 HEM45と同一のアミノ酸配列を有し、 また I SG 20と 2アミノ酸残基の相違するタンパクであること力 月らかとなつた。 HEM45 エストロゲンにより発現上昇すること力知られており、 また I SG20は I型及 び I I型インタ一フエロンにより 昇すること力知られている。 しかし、 ρ 53 の不活化により発現上昇するという を有すること 何ら知られていない。 難例 7  As described above, it was determined that the protein had the same amino acid sequence as that of IRG27 HEM45 and that was different from ISG20 in two amino acid residues. HEM45 is known to be upregulated by estrogen, and ISG20 is known to be upregulated by type I and II interferon. However, it is not known that the expression is increased by inactivating ρ53. Difficult case 7

マウス型 I R_ 27のクローニンク: Cloning of mouse type I R_27:

マウス型 I RG27 (ml RG27) 遺伝子の一部配列 E S Tデータベースか ら推定されたが、 h I RG27のオープンリ一ディングフレームに対応する領域内に 塩基の欠失があり、 そのままァミノ酸配列に翻訳すると m I R G 27遺伝子のコード するタンパク質は h I RG 27タンパク質と比較して C末端が欠失したポリペプチド となる。 そこで、 ml RG 27遺伝子がコードするタンパク質のアミノ酸酉己列を明ら かにする目的で、 E STデータベースの塩基配列に基づきプライマ一を設定し、 マウ ス脾臓 cDNAライブラリ一 (C 1 o n t e c h社) を铸型とした P C Rにより DN A断片を増幅し、 pGEM_T Ea s y Ve c t o r (P r om e g a社) に導 入した。 その結果、 8種のクローン力得られ、 その内 2種の全塩基配列の決定を行つ た。 また、 増幅した PCR断片を用いた直接法による塩基配列の決定も行い、 ml R G 27 c DNA遺伝子の正しい塩基配列を決定した。  Partial sequence of mouse type I RG27 (ml RG27) gene Deduced from EST database, base deletion in the region corresponding to open reading frame of hI RG27, translated into amino acid sequence as is Then, the protein encoded by the mIRG27 gene becomes a polypeptide having a C-terminal deletion compared to the hIRG27 protein. Therefore, in order to clarify the amino acid sequence of the protein encoded by the mlRG27 gene, a primer was set based on the nucleotide sequence of the EST database, and a mouse spleen cDNA library (C1tech) The DNA fragment was amplified by PCR using the 铸 as a 铸, and introduced into pGEM_Teasy Vector (Promega). As a result, eight types of clones were obtained, of which the total nucleotide sequences of two types were determined. In addition, the nucleotide sequence was determined by the direct method using the amplified PCR fragment, and the correct nucleotide sequence of the mlRG27c DNA gene was determined.

決定された塩基配列を E STデータベースよリ得られた配列と比較したところ、 4 力所で置換、 欠失、 挿入があること力明らかとなった。 m I R G 27遺伝子と h I R G27遺伝子のオープンリ一ディンダフレ一ム領域の相同性は 83. 2 %であり、 遺 伝子の塩基配列よリ推定された m I RG 27タンパク質と h I RG 27タンパク質の アミノ酸配列の相同性は 82. 3%であった。 また h I RG27と同じく m I RG2 7も 181ァミノ酸であった。 決定された m I RG27の塩基配列を配列番号: 5 に、 また推定されるアミノ酸配列を配列番号: 2に示した。 実施例 8 Comparison of the determined nucleotide sequence with the sequence obtained from the EST database revealed that there were substitutions, deletions and insertions at four positions. The homology of the open reading frame region of the mIRG27 gene and the hIRG27 gene is 83.2%, indicating that the mIRG27 and hIRG27 proteins were deduced from the nucleotide sequence of the gene. The amino acid sequence had a homology of 82.3%. M I RG2 as well as h I RG27 7 was also 181 amino acid. The determined nucleotide sequence of mI RG27 is shown in SEQ ID NO: 5, and the deduced amino acid sequence is shown in SEQ ID NO: 2. Example 8

I RG27の癌,での発現の検討  Examination of expression of I RG27 in cancer

I RG27の癌繊での発現の検討を行うため、 同一患者の腫瘍部 ·非腫瘍部繊 より調製された RNAを用いてノーザンプロット解斤を行った。 プロ一ブとして h I RG27 cDNA (配列番号: 3) の N c o l— S ac I断片を用い、 前言 HJB瘍部 '非腫瘍部組織の RN Aのブロットされた Hum an Tumo r Pane l B l o t s (I n v i t r o g e n社) を使って常法によリハイブリダイゼ一ションを 行った。 結果を図 5及び図 6に示す。 I RG27 高嫌に腫瘍部での遺伝子発現 の上昇していることが明らかとなった。 腫瘍部での I RG 27遺伝子の■の増加度 と癌腫を比較した結果、 70%の癌腫で I RG27の発現力上昇していることか月ら かとなつた。 具体的に 食道癌、 胃癌、 纏、 腎癌、 甲 W¾、 耳下鹏、 尿管癌 、 膀胱癌、 子宮癌、 肝癌、 ?し癌、 卵巣癌、 卵管癌で I RG 27の発現が上昇していた 。 また、 鹏患者 4症例中 3症例で (図 6) 、 腎癌患者 2症例中全症例で (図 5) 、 I RG27の発 昇が認められた。 腫瘍部における発 S±昇に関して表 3及び表 4 にまとめた (表中、 卞カ多いほど非腫瘍部より腫瘍部での発現の髓カ缟いことを、 →は腫瘍部と非腫瘍部との間の発 が少ないことを、 iiffl瘍部での発現が非腫瘍 部より少ないことを示す) 。 表 3は図 5の結果に、 表 4は図 6の結果に、 それぞれ対 応している。 表 3 In order to examine the expression of IRG27 in the tumor fiber, Northern plot defoliation was performed using RNA prepared from tumor and non-tumor fibers of the same patient. Using N col-Sac I fragment of hI RG27 cDNA (SEQ ID NO: 3) as a probe, Hum an Tumor Panel B lots ( Invitrogen) was used for rehybridization by a conventional method. The results are shown in FIGS. I RG27 It was revealed that the gene expression in the tumor was elevated in a high degree. As a result of comparing the increase in the IRG27 gene in the tumor region with the carcinoma, 70% of the carcinomas had increased the expression level of IRG27. Specifically, esophageal cancer, stomach cancer, body, kidney cancer, instep W¾, parotid, ureteral cancer, bladder cancer, uterine cancer, liver cancer,? IRG27 expression was elevated in human, ovarian, and fallopian tube cancers. In addition, in 3 out of 4 patients (Fig. 6), and in 2 out of 2 renal cancer patients (Fig. 5), the rise of IRG27 was observed. Tables 3 and 4 summarize the rise of S ± in the tumor area. (In the table, the more Byeons, the greater the expression in the tumor area than in the non-tumor area. This indicates that the expression is lower in the iiffl's tumor than in the non-tumor's). Table 3 corresponds to the results in Figure 5, and Table 4 corresponds to the results in Figure 6. Table 3

Figure imgf000036_0001
Figure imgf000036_0001

表 4 Table 4

Figure imgf000036_0002
以上のように、 p 5 3の不活化にともない発現カ^:昇する遺伝子としてクロ一ニン グされた I R G 2 7遺伝子の発現上昇 ί 7 0 %¾8の腫瘍部で認められたが、 この 値は、 癌患者において Ρ 5 3カ変異している割合 (約 5 0 %、 Cel l , 88, P323-331 ( 1997) ) より高 、値であった。 また、 図 5に示された 2 0症例の中で非腫瘍部ではほ とんど発現がなく腫瘍部で発現力 s '認められた症例に限定すると、 2 0症 』の内、 腎癌 ( 2症例) 、 肝癌、 甲状腺癌、 耳下腺癌、 尿管癌、 膀胱、 子宮癌、 卵巣癌でその傾向 (顕著であった。 頻度は 4 5 %であった。
Figure imgf000036_0002
As described above, the expression of the IRG27 gene, which was cloned as a gene that increases with the inactivation of p53, was observed in tumors of ί70% ¾8. the proportion that [rho 5 3 months mutations in cancer patients than the height (about 5 0%, Cel l, 88 , P 323-331 (1997)), was a value. In addition, among the 20 cases shown in Fig. 5, if the expression was not observed in the non-tumor area and was expressed in the tumor area s', the renal cancer (20 cases) 2 cases), liver cancer, thyroid cancer, parotid gland cancer, ureteral cancer, bladder, uterine cancer, ovarian cancer (the tendency was remarkable. The frequency was 45%.

結果として、 検討した症例では、 癌における p 5 3変異の診断率以上に癌を検出で きることカ示された。 癌の診断薬として P 5 3自身を利用した場合、 p 5 3の変異に より P 5 3の発現が認められなくなつた患者の診断までは行うことができない。 本発 明の I R G 2 7を利用することによリ、 このような患者の診断をも行うこと力 能で あり、 従って癌の診断薬として P 5 3を利用するよりも、 I R G 2 7を利用したほう がより有用であることが考えられた。 魏例 9 As a result, the cases examined showed that the cancer could be detected at a rate higher than the diagnosis rate of the p53 mutation in the cancer. When P53 itself is used as a diagnostic agent for cancer, it cannot be diagnosed until a patient whose P53 expression is no longer observed due to mutation of p53. By using IRG27 of the present invention, it is possible to diagnose such patients, and therefore, use IRG27 rather than using P53 as a cancer diagnostic. It was thought that doing it would be more useful. Wei example 9

h I R G 27ポリぺプチドに対する抗体の作製 Production of antibodies to hIRG27 polypeptide

I RG 27タンパク質を検出する抗体を作製するため、 配列番号: 1に記載の h i RG27のアミノ酸配列の中から 3力所の領域を選定し、 オリゴペプチドを合成した 。 具体的には、 配列番号: 1に記載のアミノ酸配列の第 104位〜 127位の部分よ りなる I RG27— A、 第 131位〜 153位の部分よりなる I RG27— B、 第 1 59位〜第 181位の部分よりなる I RG27—Cの 3種のオリコ"ペプチドを合成し た。 次いで、 オリゴペプチドを KLHにコンジュゲートし、 これを抗原に用いて常法 によリウサギを免疫し、 ゥサギ ί¾ΰι清を調製した。 調製した 6種の 清は何れも I In order to prepare an antibody for detecting the I RG27 protein, three regions were selected from the amino acid sequence of hi RG27 shown in SEQ ID NO: 1, and an oligopeptide was synthesized. Specifically, I RG27-A consisting of the portion at positions 104 to 127 of the amino acid sequence described in SEQ ID NO: 1, I RG27-B consisting of the portion at positions 131 to 153, and position 159 To 181st position of IRG27-C were synthesized. Then, the oligopeptide was conjugated to KLH, and this was used as an antigen to immunize rabbits in the usual manner. Egrets were prepared.

RG27タンパク質を認識した。 RG27 protein was recognized.

次に、 2—フルオロー 1—メチルピリジニゥムトルエン一 4ースルホン酸活性化セ ルロファイン (生化学工業社) をペプチド固定ィヒアフィニティ一カラムの坦体として 使用し、 先に抗原として使用したオリゴペプチドを該坦体に結合させた。 次に、 先に 調製した iitlill清 I RG27 A— 1及び 2、 11 0278— 1及び2、 I RG27C— 1及び 2のうち、 脑清 I RG27 A— 2、 I RG27B— 2、 I RG27C— 2の 各々 9mlをァフィ二ティ一カラムに添加し、 転倒混和した。 その後 4 °Cで一晩放置 し、 TBSで洗浄後、 0. 1M グリシン一 HC 1 (pH2. 5) で溶出した。 ァフ ィニティ一精製後の抗体の I gG量を測定したところ、 抗 I RG27A— 2 I gG 、 抗 I RG27B— 2 I g G、 抗 I RG 27 C— 2 I gG^ 各々およそ 0. 2 mg/m 1, lmgXm 1, 0. 2mgZm lであった。 δ¾ΰΐ清及び精製した抗体を 用いたウェスタンプロット角晰の結果を図 7に示す。 SDS—ポリアクリルアミド電 気泳動に供したタンパク質 p cDNA3. 1 (+ ) ( I η V i t r o g e η社) に I RG 27遺伝子を挿入した糸雄えプラスミド DNAを DLD— 1細胞 (大日本製 m±) にトランスフエクトして得られた安定形質転換細胞の細胞溶解液、 及び、 べク ターのみを導入した安定形質転換細胞の細胞溶解液である。 図 7より明らかなようにNext, 2-fluoro-1-methylpyridinium toluene-14-sulfonic acid-activated Cellulofine (Seikagaku Corporation) was used as the carrier for the peptide-immobilized column, and the oligos previously used as antigens were used. Peptides were coupled to the carrier. Next, of the previously prepared iitlill purified I RG27 A-1 and 2, 110278-1 and 2 and I RG27C-1 and 2, purified I RG27 A-2, I RG27B-2 and I RG27C-2 Was added to the affinity column and mixed by inversion. Then, the mixture was left overnight at 4 ° C, washed with TBS, and eluted with 0.1 M glycine-HC1 (pH 2.5). Measurement of the I g G amount of an antibody of § full Initi After one purification, anti-I RG27A- 2 I gG, anti I RG27B- 2 I g G, anti-I RG 27 C- 2 I gG ^ each approximately 0.2 mg / m 1, lmgXm 1, 0.2 mgZml. FIG. 7 shows the results of Western plot clarification using δ-purified and purified antibodies. SDS—Polyacrylamide electrophoresed protein p cDNA3.1 (+) (I η V itroge η) with the IRG27 gene inserted into the DLD-1 cell (Dainihon m ± ) Is a cell lysate of a stable transformed cell obtained by transfection, and a cell lysate of a stable transformed cell into which only the vector is introduced. As evident from Figure 7

、 特に抗 I RG27C— 2 I

Figure imgf000037_0001
り、 ゥ エスタンブロットに使用する抗体として最適であると考えられた。
Figure imgf000038_0001
, Especially anti-I RG27C—2 I
Figure imgf000037_0001
、 It was considered to be optimal as an antibody for use in easter blot.
Figure imgf000038_0001

抗体を用いた I RG27の検出 Detection of I RG27 using antibodies

正常細胞である H EL299と WI 38、 胎児腎由来形質転換細胞である 293及 び各種の癌細胞から得られた R N A及びタンパク質を用いて、 遺伝子の 性とタン ノ ク質の産生性に相関性が認められるかについて検討した。  Correlation between gene sex and protein production using RNA and proteins obtained from normal cells HEL299 and WI38, fetal kidney-derived transformed cells 293 and various cancer cells It was examined whether or not was observed.

1 ) ノーザンブロッテイング  1) Northern blotting

各種細胞からの全 RNAの調製 G I BCO— BRL社の Trizolキットを用いて 行った。 20 gの全 RNAをホルマリン含有 1 %ァガ口一スゲリ !/«気泳動にかけ、 NEN社のナイロンメンブレン (Ge n e Sc r e en P 1 u s ) に転写後、 1 M N a C 1、 10 %デキストラン、 1 % S D S、 50 %ホルムアミド、 100^6 g/ m 1サケ精子 DNAを用いてプレハイブリダィゼ一シヨンを行った。 T ak a r a社 の Bc aBEST Labe l l i ng K i tを用い32 Pで標識した I RG 27 cDNA (配列番号: 3) の Nc o IZS ac I断片をプローブとし、 常法によリノ ーザンハイブリダイゼ一ションを行つた。 洗浄は室温で 10分間 2 X S S Cで 2回、 60°Cで 20分間 2 X S SC、 1%SDSで 2回、 次いで室温で 10分間 0.1 x S S C、 0.1%SD Sで 1回行った。 検出 コダック社の B I OMAX MSフィルム を用いて行った。 Preparation of total RNA from various cells GI BCO-BRL was performed using a Trizol kit. 20 g of total RNA is formalin-containing 1% agarose per ligation! / «Electrophoresis and transferred to NEN nylon membrane (Gene Screen P 1 us), then 1 MNaCl, 10% dextran Prehybridization was performed using 1% SDS, 50% formamide, and 100 ^ 6 g / ml salmon sperm DNA. Using the Nco IZS ac I fragment of IRG27 cDNA (SEQ ID NO: 3) labeled with 32 P using BcaBEST Labeling Kit from Takara as a probe, linogen hybridization was performed by a conventional method. I went to one session. Washing was performed twice at room temperature for 10 minutes with 2 XSSC, twice at 60 ° C for 20 minutes with 2 XSSC and 1% SDS, and then at room temperature for 10 minutes with 0.1 x SSC and 0.1% SDS once. Detection was performed using Kodak's BI OMAX MS film.

2) ウェスタンブロッテイング 2) Western blotting

細胞からのタンパク質の調製は、 31.25niM Tris- HCl(pH6.8)、 7.5%グリセロール 、 2% S D Sで細胞を溶解することにより行い、 Pierce社の BC Aタンパク質測定キッ トを用いてタンパク質 iU¾を決定した。 10 のタンパク質溶液に 5% (V/V) 2—メ ルカプトエタノール、 0.01%(W/V)BPBを加え、 100°Cで 5分間加謝麦、 15¾SDS- ポリアクリルァミドゲリ 1/S気泳動に供した。 電気的にミリポア社の PVDFメンブレン ( ィモビロン P ) に転写後、 1%正常ャギ血清 (Vector社) 含有 T BS-T (2 OmM Tr i sHC l (pH 7. 5) , 15 OmM NaC 1 , 0. 05% (v/v) T we e n 20) 溶液でブロッキングし、 200倍希釈のァフィ二ティー精製抗 I RG 27抗体 (抗 I RG27C— 2 I gG) を反応させた。 次いで、 5000倍希釈した 2次抗体 (カッペル社の HRP標瞧ゥサギ IgGャギ抗体) を反応させ、 アマシャム 社の ECL Plusで I RG 27を検出した。 Preparation of proteins from cells was performed by lysing the cells with 31.25 niM Tris-HCl (pH 6.8), 7.5% glycerol, and 2% SDS.The protein iU¾ was obtained using Pierce's BCA protein measurement kit. Were determined. Add 5% (V / V) 2-mercaptoethanol and 0.01% (W / V) BPB to the protein solution of No. 10, and add oat barley at 100 ° C for 5 minutes, 15¾SDS-polyacrylamide gel 1 / S It was subjected to electrophoresis. After being electrically transferred to a Millipore PVDF membrane (Immobilon P), TBS-T (2 OmM TrisHCl (pH 7.5) containing 1% normal goat serum (Vector), 15 OmM NaC 1, 0.05% (v / v) T Ween 20) solution and blocked with 200-fold diluted affinity-purified anti-I RG27 antibody (anti-I RG27C-2 IgG). Then, a 5000-fold diluted secondary antibody (Kappel's HRP standard heron IgG goat antibody) was reacted, and IRG27 was detected with Amersham's ECL Plus.

3 ) 結果 3) Result

図 8に示されるように、 ノ一ザンプロッティングによる R N Aの検出の結果とゥェ スタンプロッテイングによるタンパク質の検出の結果は良く一致していた。 なお、 m RNAの発現が認められなかつた DLD- 1細胞でタンパク質力 出されなかったが、 CBB 染色の結果が示すように電気泳動にアプライされたサンプノ が少なかったためと考 えられる。 以上の様に、 作製した抗 I RG 27抗体は、 I RG27を定量的に検出で きること力 ^示された。 例 1 1  As shown in FIG. 8, the results of detection of RNA by Northern plotting and the results of protein detection by stamp lotting were in good agreement. In addition, although protein expression was not detected in DLD-1 cells where mRNA expression was not observed, it is probable that as shown in the results of CBB staining, the amount of sampno applied to electrophoresis was small. As described above, the anti-IRG27 antibody thus produced was shown to be capable of quantitatively detecting IRG27. Example 1 1

抗 I RG27抗体を用いた EL I SA法の ¾j£ Ij £ of the ELISA method using anti-I RG27 antibody

血液や唾液を含む体液や尿中に存在する I RG 27タンパク質の検出を行うために 、 抗 I RG27抗体を用いたサンドイッチ EL I SA法を? した。  In order to detect the IRG27 protein present in body fluids including blood and saliva and urine, a sandwich ELISA using an anti-IRG27 antibody? did.

本 ¾ ^で用いる I RGタンパク質 以下の如き GSTとの融合タンパク質として 調製した。 すなわちまず、 実施例 6でクロ一ニングされたヒト I RG 27 (配列番号 : 3) の cDNAを pGEX— 6 Ρ— 1 (フアルマシア) のクロ一ニンク"部位に読み 枠が合うように挿入し、 GST融合 I RG27タンパク質発現プラスミドを作製した 。 次にこの発現プラスミドで宿主大腸菌 JM109 (東洋紡) を形質転換した後、 3 7 °Cで培養し、 0 D 600力約 1. 1の時点で 0. 1 mM I P T Gを添加して 1時 間培 *¾、 菌体を回 4又した。 菌体を ImM PMSFと 1 β g/m 1 ぺプスタチン A 、 および l gZml ロイぺプチンを含むバッファ一 PB S— E (PBS、 5mM EDTA) に懸濁し、 超音波破砕後、 可 匕如理として最終濃度 1%になるように T r i t onX- 100を加えた。 この可 匕菌液を遠心して上清を回収し、 その上清 にグルタチオンセファロ一ス 4 B (Pharmac i a) をカロえ、 GST融合 I RG 27タンパク質を結合させた。 ダルタチオンセファロ一スを PB S— Eで 3回洗浄 し、 lQmM 元型グルタチオンを含む 50mM TrisHCl (pH8.0)バッファ一で G S T融合 I RG27タンパク質を溶出した。 精製した GST融合 I RG27タンパク質を P r o t e i n As s ay K i t (B I ORAD) を用いて定量した。 The IRG protein used in the present invention was prepared as a fusion protein with GST as follows. That is, first, the cDNA of human I RG 27 (SEQ ID NO: 3) cloned in Example 6 was inserted into pGEX-6 合 う -1 (Pharmacia) so that the reading frame matched it. A GST fusion I RG27 protein expression plasmid was prepared, and then the host E. coli JM109 (Toyobo) was transformed with the expression plasmid and cultured at 37 ° C. 1 mM IPTG was added and the cells were cultured for 1 hour * ¾ and the cells were recirculated 4. The cells were buffered with PBS containing ImM PMSF, 1 β g / m 1 pepstatin A, and lgZml leptin. — Suspended in E (PBS, 5mM EDTA), sonicated, and added Triton X-100 to a final concentration of 1% as a control. Glutathione Sepharose 4B (Pharmacia) was added to the supernatant, and GST-fused IRG 27 proteins were bound. The daltathione Sepharose was washed three times with PBS-E, and the GST-fused IRG27 protein was eluted with 50 mM TrisHCl (pH 8.0) buffer containing lQmM original glutathione. The purified GST fusion I RG27 protein was quantified using the Protein Assay Kit (BI ORAD).

以上のようにして作製した GST融合 I RG 27と抗 I RG 27抗体とを用い、 以 下のようにして EL I SA法を ¾tした。  Using the GST-fused IRG27 and anti-IRG27 antibody prepared as described above, the ELISA method was performed as follows.

まず、 »例 9で作製した抗 I RG27 B— 2 I g Gを 96穴プレートであるィム ノプレート I I (Nunc社) に吸着させた後、 先に調製した種々の濃度の GST融 合 I RG27を反応させた。 続いてベ一リンガ一マンハイム社のピオチンラベリング キットを用いて作製したピオチンィ bMl RG 27 C— 2 I gGを反応させ、 ペルォ キシダ一ゼ '標識ストレプトアビジン (B 10 SOURCE I NTERNAT I ON AL社) と反応させた後、 TMB Mi c rowe l l Pe rox i das e S u b s t r at e Sy s t em (KPL社) を用いて発色反応を行った。 結果を図 9 に示した。 本発明の抗 I RG 27抗体 G S Tには反応しないが、 G S T融合 I R G27には抗原 i JSおよび検出抗体の 依存的に反応した。 この結果から、 本発明 の抗 I RG27抗体を用いて EL I S Aの行えること力明らかとなった。

Figure imgf000040_0001
First, the anti-I RG27 B-2 IgG prepared in Example 9 was adsorbed onto a 96-well plate, Immunoplate II (Nunc), and then the GST fusion I prepared at various concentrations prepared above. RG27 was reacted. Subsequently, the biotin bMl RG 27 C-2IgG prepared using the biotin labeling kit of Boehringer Mannheim was reacted, and peroxidase-labeled streptavidin (B10 SOURCE I NTERNAT ION AL) After the reaction, a color reaction was carried out using TMB Microcell II Perox i das e Sub strat e System (KPL). The results are shown in FIG. The anti-IRG27 antibody of the present invention did not react with GST, but reacted with GST-fused IRG27 in a manner dependent on the antigen iJS and the detection antibody. From these results, the ability to perform ELISA using the anti-IRG27 antibody of the present invention became clear.
Figure imgf000040_0001

坦癌マウスの血中及び尿中の I RG27タンパク質の EL I SAによる検出 Detection of IRG27 protein in blood and urine of cancer-bearing mice by ELISA

Raj i細胞等のヒトリンノ腫由来の癌細胞を C 57 B 6等のマウスの J»に投与 し、 で癌細胞を増殖させる。 その結果、 ヒト癌患者において癌細胞に対して CT L力誘導されるのと同様に、 ヒト癌細胞に対する細胞障害性 T細胞 (CTL) 力マウ スにおいて誘導され、 該 CTL力癌細胞を傷害し、 その結 ¾fil中や尿中にヒト癌細胞 由来の I RG27の放出されること力^;考えられる。 従って、 癌細胞接種後、 任意の期 間で血液や尿を纖し、 前記 例 1 1に記載の EL I SA法に供することによって 、 I RG 27のタンパク質を検出すること力できる。 mi 3 A human lymphoma-derived cancer cell such as Raji cell is administered to mouse J »such as C57B6, and the cancer cell is proliferated by. As a result, it is induced in the cytotoxic T cell (CTL) mouse against human cancer cells in the same manner as in the induction of CTL force on cancer cells in human cancer patients, and damages the CTL-powered cancer cells. However, it is possible that IRG27 derived from human cancer cells is released into fil and urine. Therefore, the blood and urine can be woven at any time after inoculation of the cancer cells and subjected to the ELISA method described in Example 11 above, whereby the protein of IRG27 can be detected. mi 3

癌患者の尿を用いた I RG27タンパク質の EL I S Aによる検出  Detection of IRG27 protein by ELISA using urine of cancer patients

癌患者及び健常者の尿を ¾5¾例 12と同様に EL I SAに供することによって、 癌 患者の尿で有意に I RG 27タンパク質カ權積していること力判定できる。  By subjecting the urine of a cancer patient and a healthy subject to ELISA in the same manner as in {5} Example 12, it is possible to determine that the urine of a cancer patient has significant IRG27 protein control.

具体的には、 例え (^胱癌患者ゃ腎癌患者の尿を採取し、 遠心後、 上清を集め、 検 出する患者尿の量を段階的に増やして実施例 1 1に記載の如き EL I SAを行う。 健 常人に較べ有意に I RG 27タンパク質力 S癌患者で検出されるため、 受診者の中から 癌を有する患者を選別すること力可能となる。 配列表フリ一テキスト  Specifically, for example, (^ the urine of a patient with bladder cancer ゃ renal cancer patient was collected, centrifuged, the supernatant was collected, and the amount of patient urine to be detected was gradually increased, as described in Example 11 Perform EL ISA Significantly detect IRG27 protein in S cancer patients compared to healthy individuals, so that it is possible to select patients with cancer from among the examinees.

配列番号: 4に記載の塩基配列の第 122番目及び第 136番目の塩基 { 決定で きなかった塩基である。  The 122nd and 136th bases of the base sequence described in SEQ ID NO: 4 {The base could not be determined.

配列番号: 19に記載の塩基配列の第 131番目の^ S 決定できなかった^ ¾ である。  ^ S at the 131st position in the base sequence described in SEQ ID NO: 19 could not be determined.

配列番号: 20に記載の塩基配列の第 74番目及び第 87番目の塩基 決定でき なかった塩基である。  The 74th and 87th nucleotides in the nucleotide sequence of SEQ ID NO: 20 could not be determined.

配列番号: 21に記載の塩基配列の第 24番目、 第 34番目、 第 45番目、 第 65 番目、 第 66番目、 第 70番目、 第 73番目、 第 74番目、 第 84番目、 第 86番目 、 第 89番目、 第 109番目、 第 1 14番目及び第 123番目の塩基 決定できな かった塩基である。  The 24th, 34th, 45th, 65th, 66th, 70th, 73rd, 74th, 84th, 84th, and 86th positions of the nucleotide sequence described in SEQ ID NO: 21 The 89th, 109th, 114th and 123rd bases The base could not be determined.

配列番号: 23に記載の塩基配列の第 17番目、 第 62番目、 第 99番目、 第 1 1 1番目、 第 125番目、 第 129番目及び第 170番目の塩基は、 決定できなかった である。  The 17th, 62nd, 99th, 11th, 125th, 129th and 170th bases of the base sequence described in SEQ ID NO: 23 could not be determined.

配列番号: 24に記載の塩基配列の第 17番目、 第 62番目、 第 99番目、 第 1 1 1番目、 第 125番目、 第 129番目及び第 170番目の塩基 決定できなかった 塩基である。  The 17th, 62nd, 99th, 11th, 125th, 129th, and 170th bases of the base sequence described in SEQ ID NO: 24 bases that could not be determined.

配列番号: 26に記載の塩基配列の第 8番目、 第 41番目及び第 87番目の は 、 決定できなかった塩基である。 The eighth, 41st and 87th amino acids in the nucleotide sequence of SEQ ID NO: 26 The base could not be determined.

配列番号: 2 8に記載の塩基配列の第 6 3番目、 第 7 5番目、 第 1 0 8番目、 第 1 5 8番目、 第 1 7 9番目及び第 1 8 9番目の塩基は、 決定できなかった塩基である 配列番号: 3 0に記載の塩基配列の第 1 5番目、 第 2 8番目及び第 4 1番目の塩基 I 決定できなかった塩基である。  The 63rd, 75th, 108th, 158th, 179th and 189th bases of the base sequence described in SEQ ID NO: 28 can be determined. No bases 15th, 28th, and 41st bases in the base sequence of SEQ ID NO: 30 I Bases that could not be determined.

配列番号: 3 4に記載の塩基配列の第 1 1番目、 第 1 2番目、 第 6 8番目、 第 7 0 番目、 第 8 9番目、 第 1 4 6番目、 第 1 6 9番目、 第 1 7 7番目、 第 1 7 9番目、 第 1 8 6番目、 第 1 9 1番目及び第 1 9 6番目の塩基は、 決定できなかった塩基である 配列番号: 3 6に記載の塩基配列の第 1 0 2番目、 第 1 1 1番目、 第 1 3 7番目、 第 1 5 0番目、 第 1 5 8番目、 第 1 6 7番目及び第 1 7 0番目の塩基 決定できな かった塩基である。  1st, 1st, 1st, 2nd, 68th, 70th, 89th, 146th, 169th, 1st, 1st The 77th, 179th, 186th, 191st and 196th bases are bases that could not be determined SEQ ID NO: 36 10 2nd, 1st 1st, 1st 3rd, 1st 150th, 1st 58th, 1st 167th and 170th bases bases that could not be determined .

酉己列番号: 3 9に言己載の塩基酉己列の第 1 0 8番目、 第 1 5 7番目、 第 1 8 1番目及 び第 2 0 9番目の塩基 決定できなかった塩基である。  Rooster No .: bases described in 39. Bases No. 108, No. 157, No. 181, and No. 209 in base of rooster. These bases could not be determined. .

配列番号: 4 1に記載の塩基配列の第 2 2 1番目の^ S 決定できなかった塩基 である。 産業上の利用性  SEQ ID NO: 41 2nd 21st ^ S of the nucleotide sequence described in SEQ ID NO: 41 is a nucleotide that could not be determined. Industrial applicability

本発明の I R G 2 7遺伝子またはその一部、 或いは該 I R G 2 7タンパク質に対す る抗体 広範な癌の診断に有用である。  Antibodies against the IRG27 gene of the present invention or a part thereof, or the IRG27 protein are useful for diagnosis of a wide variety of cancers.

Claims

請 求 の 範 囲 The scope of the claims 1. 以下の (a) 及び (b) の を有する遺伝子の正鎖及び逆鎖の、 少なくとも 纖した 17塩基の配列よりなる 1本鎖又は 2本鎖 DNA、 あるいはこれらの DNA の標,を有効成分とする、 癌の診断薬。 1. Effective single- or double-stranded DNA consisting of at least 17 nucleotides of the normal and reverse strands of the gene having the following (a) and (b), or the target of these DNAs. As a component, a diagnostic agent for cancer. (a) 癌抑制因子 p 53の不活化により発現カ禱導される  (a) Expression is induced by inactivation of tumor suppressor p53 (b) 正常糸!^と比較して癌纖において発現の上昇力 S認められる  (b) Increased expression of S in cancer fiber compared to normal thread! ^ 2. 以下の (a) 、 (b) 及び (c) の赚を有する遺伝子の正鎖及び逆鎖の、 少 なくとも した 17i#Sの配列よりなる 1本鎖又は 2本鎖 DNA、 あるいはこれら の DNAの標離を有効成分とする、 癌の診断薬。 2. Single- or double-stranded DNA consisting of at least the 17i # S sequence of the positive and reverse chains of the gene having the following (a), (b) and (c), or A diagnostic agent for cancer, comprising the separation of DNA as an active ingredient. (a) 癌抑制因子 p 53の不活化により発現が誘導される  (a) Expression is induced by inactivation of tumor suppressor p53 (b) 正常繊と比較して癌糸!^において発現の上昇力 S認められる  (b) Cancer thread compared to normal fiber! Increased expression of S in ^ (c) 配列番号: 14〜酉己列番号: 29いずれ力記載の塩基配列を含有する  (c) SEQ ID NO: 14 to 29 3. 配列番号: 3〜配列番号: 5いずれか記載の塩基配列よリなる遺伝子又はその アレル変異体遺伝子に対する mRN Aを特異的に検出し得る 1本鎖又は 2本鎖 DN A 、 あるいはこれらの DNAの標識体を有効成分とする、 癌の診断薬。 3. Single- or double-stranded DNA capable of specifically detecting mRNA for a gene consisting of the nucleotide sequence of any one of SEQ ID NO: 3 to SEQ ID NO: 5 or an allele mutant gene thereof, or A diagnostic agent for cancer, comprising a labeled DNA as an active ingredient. 4. 配列番号: 3〜配列番号: 5 Vヽずれ力記載の塩基配列よリなる遺伝子又はその アレル変異体遺伝子の正鎖及び逆鎖の、 少なくとも連続した 17塩基の配列よリなる 1本鎖又は 2本鎖 DNA、 あるいはこれらの DNAの標難を有効成分とする、 癌の 4. SEQ ID NO: 3 to SEQ ID NO: 5 V Single-stranded sequence consisting of a sequence consisting of at least 17 consecutive bases of the gene consisting of the base sequence described in the deviation force or the positive and reverse chains of the allele mutant gene thereof Or double-stranded DNA or the target of these DNAs as an active ingredient, 5. ノ、ィプリダイゼーション反応用のプローブ又は P C R反応用のプライマーであ ることを赚とする、 請求項 1〜 4 、ずれカゝ記載の癌の診断薬。 5. The diagnostic agent for cancer according to claim 1, wherein the diagnostic agent is a probe for an amplification reaction or a primer for a PCR reaction. 6. PCR反応用のプライマ一の長さが 17塩基〜 50塩基であることを と する、 請求項5記載の癌の診断薬。 6. The cancer diagnostic agent according to claim 5 , wherein the length of the primer for the PCR reaction is 17 to 50 bases. 7. 以下の A、 B又は Cのプライマーセット、 あるいはこれらのプライマ一の少な くとも 17塩基以上の配列よりなる該プライマ一セットを有効成分とする、 請求項 5 又は 6記載の癌の診断薬。 7. The diagnostic agent for cancer according to claim 5 or 6, wherein the following A, B or C primer set, or the primer set consisting of a sequence of at least 17 bases or more of these primers is used as an active ingredient. . (A)  (A) 5' 側プライマ一配列 TGAGGGCGCAGAGGCAGGCAGCAT (配列番号: 8 )  5 'primer sequence TGAGGGCGCAGAGGCAGGCAGCAT (SEQ ID NO: 8) 3' 側プライマ一配列 CCGAGCTGTGTCCAAGCAGGCTGT (酉己列番号: 9 )  3'-side primer sequence CCGAGCTGTGTCCAAGCAGGCTGT (Rooster column number: 9) (B)  (B) 5' 側プライマ一配列 AAAGGCAAGCTGGTGGTGGGTCAT (配列番号: 10)  5 'primer sequence AAAGGCAAGCTGGTGGTGGGTCAT (SEQ ID NO: 10) 3' 側プライマ一酉己列 CTGTCCCAAAAAGCCGAAAGCCTC (配列番号 : 1 1)  3 'primer Primer's line CTGTCCCAAAAAGCCGAAAGCCTC (SEQ ID NO: 1 1) (C)  (C) 5, 側プライマ一酉己列 TTCCGCCCCTGACTTCACTTGATAACAAAC (配列番号: 12) 3' 側プライマ一配列 CAGGCCGGATGAACTTGTCGT (配列番号: 13)  5, side primer sequence TTCCGCCCCTGACTTCACTTGATAACAAAC (SEQ ID NO: 12) 3 'primer sequence CAGGCCGGATGAACTTGTCGT (SEQ ID NO: 13) 8. 以下の (a) 及び (b) の を有する遺伝子によリコ一ドされるポリべプチ ドを特異的に認識する抗体、 抗体フラグメント、 又はこれらの誘 :。 8. An antibody, antibody fragment, or derivative thereof that specifically recognizes a polypeptide encoded by a gene having the following (a) and (b): (a) 癌抑制因子 p 53の不活化により発現が誘導される  (a) Expression is induced by inactivation of tumor suppressor p53 (b) 正常,と比較して癌糸 において発現の上昇力 ^認められる  (b) Increased expression in cancer thread compared to normal, ^ 9. 配列番号: 14〜配列番号: 29いずれか記載の塩基配列を含有する遺伝子に よリコ一ドされるポリペプチドを特異的に認識する抗体、 抗体フラグメント、 又はこ れらの誘 :。 9. An antibody, an antibody fragment, or an antibody thereof specifically recognizing a polypeptide encoded by a gene containing the nucleotide sequence of any one of SEQ ID NOs: 14 to 29. 10. 配列番号: 1又 f 己列番号: 2記載のアミノ酸配列よりなるポリペプチド又 はそのアレル変異体を特異的に認識する抗体、 抗体フラグメント、 又はこれらの誘導 体。 10. An antibody, antibody fragment, or derivative thereof that specifically recognizes a polypeptide comprising the amino acid sequence of SEQ ID NO: 1 or SEQ ID NO: 2 or an allelic variant thereof body. 1 1 . 請求項 8〜請求項 1 0 V、ずれか記載の抗体、 抗体フラグメント、 又はこれら の誘 を有効成分とする、 癌の診断薬。 11. A diagnostic agent for cancer, comprising the antibody, the antibody fragment or the derivative thereof according to any one of claims 8 to 10V as an active ingredient. 1 2 . 請求項 1〜7又は請求項 1 1いずれか記載の癌の診断薬を用いることを! とする、 癌の診断方法。 12. A method for diagnosing cancer, comprising using the diagnostic agent for cancer according to any one of claims 1 to 7 or claim 11. 1 3 . 診断対象として糸 又 胞を用いることを とする、 請求項 1 2記載の 癌の診断方法。 13. The method for diagnosing cancer according to claim 12, wherein a thread or a cell is used as a diagnosis target. 1 4 . 診断対象として血液、 唾液を含む または尿を用いることを,とする、 請求項 1 2記載の癌の診断方法。 14. The method for diagnosing cancer according to claim 12, wherein blood or saliva or urine is used as a diagnosis target. 1 5 . 固翻を診断するための、 請求項 1 2〜 1 4レ、ずれか記載の癌の診断方法。 15. The method for diagnosing cancer according to any one of claims 12 to 14 for diagnosing inflection. 1 6 . 腎癌又 ί娥胱癌を含む泌尿器系の癌を診断するための、 請求項 1 2〜 1 5い ずれか記載の癌の診断方法。 16. The method for diagnosing cancer according to any one of claims 12 to 15, for diagnosing urinary system cancers including renal cancer and ephedra cancer. 1 7 . 配列番号: 1 4〜配列番号: 2 9いずれ力記載の塩基配列を含有し、 かつ癌 抑制因子 Ρ 5 3の不活化によリ発現が誘導される遺伝子。 17. A gene containing the nucleotide sequence of any one of SEQ ID NOs: 14 to 29 and whose expression is induced by inactivation of the tumor suppressor 因子 53. 1 8 . 配列番号: 3 0〜配列番号: 1いずれか記載の塩基配列を含有し、 かつ癌 抑制因子 Ρ 5 3の不活化により発現カ铆制される遺伝子。 18. A gene comprising the nucleotide sequence of any one of SEQ ID NO: 30 to SEQ ID NO: 1, and whose expression is regulated by inactivation of the tumor suppressor factor 53.
PCT/JP2000/001796 1999-03-31 2000-03-23 Gene of irg27 polypeptide, antibody against the same and therapeutic utilization thereof Ceased WO2000060073A1 (en)

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Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001087349A1 (en) * 2000-05-19 2001-11-22 Sumitomo Pharmaceuticals Company, Limited Carcinostatic agents or antiviral agents containing irg27 protein or gene
WO2003023031A1 (en) * 2001-09-04 2003-03-20 Nippon Shinyaku Co., Ltd. Method of evaluating efficacy of nucleic acid therapy
WO2005093063A1 (en) * 2004-03-29 2005-10-06 Medical & Biological Laboratories Co., Ltd. Kit for solid cancer diagnosis and medicine for solid cancer therapy
EP2169060A1 (en) 2004-06-02 2010-03-31 alphaGEN Co., Ltd. Novel polypeptide useful for diagnosis and treatment of cancer
US8222393B2 (en) 2004-06-02 2012-07-17 Tss Biotech Inc. Polypeptide useful for cancer diagnosis and treatment

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