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WO1999016780A3 - Genetic sequences, diagnostic and/or quantification methods for the identification of staphylococci strains - Google Patents

Genetic sequences, diagnostic and/or quantification methods for the identification of staphylococci strains Download PDF

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Publication number
WO1999016780A3
WO1999016780A3 PCT/BE1998/000141 BE9800141W WO9916780A3 WO 1999016780 A3 WO1999016780 A3 WO 1999016780A3 BE 9800141 W BE9800141 W BE 9800141W WO 9916780 A3 WO9916780 A3 WO 9916780A3
Authority
WO
WIPO (PCT)
Prior art keywords
identification
diagnostic
genetic sequences
quantification methods
staphylococci
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/BE1998/000141
Other languages
French (fr)
Other versions
WO1999016780A2 (en
Inventor
Pascal Vannuffel
Jean-Luc Gala
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Universite Catholique de Louvain UCL
Original Assignee
Universite Catholique de Louvain UCL
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Universite Catholique de Louvain UCL filed Critical Universite Catholique de Louvain UCL
Priority to CA002301285A priority Critical patent/CA2301285A1/en
Priority to EP98944907A priority patent/EP1017850A2/en
Priority to JP2000513862A priority patent/JP2001518283A/en
Publication of WO1999016780A2 publication Critical patent/WO1999016780A2/en
Publication of WO1999016780A3 publication Critical patent/WO1999016780A3/en
Anticipated expiration legal-status Critical
Priority to US10/703,649 priority patent/US20040146905A1/en
Ceased legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/16—Primer sets for multiplex assays

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The present invention is related to oligonucleotides for the specific identification of Staphylococci species which nucleotide sequence has between 15 and 350 base pairs, preferably between 15 and 45 base pairs, obtained from the 'consensus' femA nucleotide sequence (CNS) of the figure or its complementary strand. The present invention is also related to a method and a diagnostic device using said oligonucleotide for the identification of various types of Staphylococci species strains.
PCT/BE1998/000141 1997-09-26 1998-09-28 Genetic sequences, diagnostic and/or quantification methods for the identification of staphylococci strains Ceased WO1999016780A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
CA002301285A CA2301285A1 (en) 1997-09-26 1998-09-28 Genetic sequences, diagnostic and/or quantification methods and devices for the identification of staphylococci strains
EP98944907A EP1017850A2 (en) 1997-09-26 1998-09-28 Genetic sequences, diagnostic and/or quantification methods for the identification of staphylococci strains
JP2000513862A JP2001518283A (en) 1997-09-26 1998-09-28 Gene sequence, diagnostic and / or quantification method and device for identification of staphylococcal strains
US10/703,649 US20040146905A1 (en) 1997-09-26 2003-11-07 Genetic sequences, diagnostic and/or quantification methods and devices for the identification of staphylococci strains

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP97870146 1997-09-26
EP97870146.4 1997-09-26

Publications (2)

Publication Number Publication Date
WO1999016780A2 WO1999016780A2 (en) 1999-04-08
WO1999016780A3 true WO1999016780A3 (en) 1999-08-05

Family

ID=8231045

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/BE1998/000141 Ceased WO1999016780A2 (en) 1997-09-26 1998-09-28 Genetic sequences, diagnostic and/or quantification methods for the identification of staphylococci strains

Country Status (4)

Country Link
EP (1) EP1017850A2 (en)
JP (1) JP2001518283A (en)
CA (1) CA2301285A1 (en)
WO (1) WO1999016780A2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR102593021B1 (en) * 2017-10-12 2023-10-31 미쓰이 가가쿠 가부시키가이샤 mecA GENE AMPLIFICATION PRIMER PAIR, mecA GENE DETECTION KIT AND mecA GENE DETECTION METHOD

Families Citing this family (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1096024A1 (en) * 1999-10-28 2001-05-02 Remacle, José Method and kit for the screening and/or the quantification of multiple homologous nucleic acid sequences on arrays
US7205104B2 (en) 2000-03-24 2007-04-17 Eppendorf Array Technologies Sa (Eat) Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arrays
US7829313B2 (en) 2000-03-24 2010-11-09 Eppendorf Array Technologies Identification and quantification of a plurality of biological (micro)organisms or their components
US7875442B2 (en) 2000-03-24 2011-01-25 Eppendorf Array Technologies Identification and quantification of a plurality of biological (micro)organisms or their components
EP1136566A1 (en) * 2000-03-24 2001-09-26 Facultés Universitaires Notre-Dame de la Paix Method and kit for detection and/or quantification of homologus nucleotide sequences on arrays
US7202026B2 (en) * 2000-03-24 2007-04-10 Eppendorf Array Technologies Sa (Eat) Identification of a large number of biological (micro)organisms groups at different levels by their detection on a same array
EP1335025A4 (en) * 2000-10-26 2006-07-05 Eisai Co Ltd Diagnostics and examination method for cancer of the colon using tannase as indication
US7666588B2 (en) 2001-03-02 2010-02-23 Ibis Biosciences, Inc. Methods for rapid forensic analysis of mitochondrial DNA and characterization of mitochondrial DNA heteroplasmy
AU2013231102B2 (en) * 2001-03-02 2016-04-28 Ibis Biosciences, Inc. Methods for rapid identification of pathogens in humans and animals
DE60217837T2 (en) * 2001-03-15 2007-10-25 Jacques Schrenzel DETECTION OF METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS BACTERIA (MRSA)
CA2508726A1 (en) 2002-12-06 2004-07-22 Isis Pharmaceuticals, Inc. Methods for rapid identification of pathogens in humans and animals
US7786289B2 (en) 2003-05-13 2010-08-31 Gen-Probe Incorporated Method and kit for identifying antibiotic-resistant microorganisms
US7338763B2 (en) 2004-06-02 2008-03-04 Eppendorf Array Technologies S.A. Method and kit for the detection and/or quantification of homologous nucleotide sequences on arrays
CN112195225A (en) * 2020-10-14 2021-01-08 南通大学附属医院 Method for detecting methicillin-resistant staphylococcus based on drug-resistant gene MecA
US20240197820A1 (en) 2021-06-02 2024-06-20 Syngulon S.A. Bacteriocin for new application
EP4346870A1 (en) 2021-06-02 2024-04-10 Syngulon S.A. Bacteriocin for new application

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0527628A1 (en) * 1991-08-13 1993-02-17 Eli Lilly And Company Rapid method for detection of methicillin-resistant staphylococci
EP0625575A2 (en) * 1993-04-30 1994-11-23 Eli Lilly And Company Fem A gene of staphylococcus epidermidis, fem A protein, and vectors of microorganisms comprising the fem A gene

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0527628A1 (en) * 1991-08-13 1993-02-17 Eli Lilly And Company Rapid method for detection of methicillin-resistant staphylococci
EP0625575A2 (en) * 1993-04-30 1994-11-23 Eli Lilly And Company Fem A gene of staphylococcus epidermidis, fem A protein, and vectors of microorganisms comprising the fem A gene

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
ALBORN W ET AL: "Cloning and characterization of femA and femB genes from Staphylococcus epidermis and Staphyloccus haemolyticus", CHEMOTHERAPY, vol. 34, no. 0, October 1994 (1994-10-01), pages 77, XP002099981 *
BREGER-BACHI B: "Expression of resistance to methicillin", TRENDS IN MICROBIOLOGY, vol. 2, no. 10, October 1994 (1994-10-01), pages 389 - 93, XP002099982 *
DATABASE GENESEQ PATENT SEQUE 1 January 1900 (1900-01-01), XP002099983, Database accession no. T78869 *
DATABASE GENESEQ PATENT SEQUE 1 January 1900 (1900-01-01), XP002099984, Database accession no. T47517 *
KIZAKI M ET AL: "Rapid and sensitive detection of femA gene in staphylocci by enzymatic detection of polymerase chain reaction (ED-PCR) Comparison with standard PCR analysis", JOURNAL OF HOSPITAL INFECTION, vol. 28, no. 4, December 1994 (1994-12-01), pages 287 - 95, XP002099979 *
ÜNAL S ET AL: "Detection of methycillin-resistant staphylococci by using the polymerase chain reaction", JOURNAL OF CLINICAL MICROBIOLOGY, vol. 30, no. 7, - July 1992 (1992-07-01), pages 1685 - 1691, XP002099980 *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR102593021B1 (en) * 2017-10-12 2023-10-31 미쓰이 가가쿠 가부시키가이샤 mecA GENE AMPLIFICATION PRIMER PAIR, mecA GENE DETECTION KIT AND mecA GENE DETECTION METHOD
KR102757284B1 (en) * 2017-10-12 2025-01-21 미쓰이 가가쿠 가부시키가이샤 mecA GENE AMPLIFICATION PRIMER PAIR, mecA GENE DETECTION KIT AND mecA GENE DETECTION METHOD

Also Published As

Publication number Publication date
JP2001518283A (en) 2001-10-16
EP1017850A2 (en) 2000-07-12
CA2301285A1 (en) 1999-04-08
WO1999016780A2 (en) 1999-04-08

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