TW202504619A - Compositions and methods for inhibiting expression of pd-l1 - Google Patents
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Abstract
Description
本發明部分涉及可用於抑制程序性細胞死亡-配體1(PD-L1)基因表達的組合物和方法。The present invention relates in part to compositions and methods that can be used to inhibit expression of the programmed cell death-ligand 1 (PD-L1) gene.
程序性細胞死亡-配體1,或程序性細胞死亡1配體1(PD-L1),也稱為B7同源物1(B7-H1),是一種272個氨基酸長的1型跨膜蛋白,在許多不同類型的細胞上作為表面標誌物存在由小鼠19號染色體和人類9號染色體上的CD274基因編碼。應當理解,本領域的普通技術人員在考慮核酸(DNA或RNA)或相應的翻譯蛋白質或其序列時,會將術語PD-L1和CD274視為通常名義上可以互換。PD-L1是PD-1的主要配體,可抑制T細胞的細胞毒性和細胞因子的產生。CD274/PD-L1已在多種組織和細胞類型中檢測到表達,包括T細胞、B細胞、巨噬細胞、樹突狀細胞和非造血細胞(包括內皮細胞、肝細胞、肌肉細胞和胎盤)。CD274/PD-L1表達與抑制抗腫瘤免疫活性有關。HCC細胞等癌細胞通過上調PD-L1表達利用此免疫檢查點,導致近端T細胞的抗腫瘤免疫功能障礙。將腫瘤或血液系統惡性腫瘤中的PD-L1表達與疾病結果相關的研究表明,PD-L1表達與所有類型的淋巴瘤/白血病、血液系統惡性腫瘤、乳腺癌、肺癌、結腸癌、卵巢癌、黑色素瘤、膀胱癌、肝癌、唾液腺癌、胃癌、神經膠質瘤、甲狀腺癌、胸腺上皮癌、頭部癌、腎癌、胰腺癌的不良預後密切相關和頸部癌症。Programmed cell death-ligand 1, or programmed cell death 1 ligand 1 (PD-L1), also known as B7 homolog 1 (B7-H1), is a 272 amino acid long type 1 transmembrane protein that is present as a surface marker on many different types of cells and is encoded by the CD274 gene on chromosome 19 in mice and chromosome 9 in humans. It should be understood that one of ordinary skill in the art considers the terms PD-L1 and CD274 to be generally interchangeable when considering nucleic acids (DNA or RNA) or the corresponding translated proteins or their sequences. PD-L1 is the primary ligand for PD-1 and inhibits T cell cytotoxicity and cytokine production. CD274/PD-L1 expression has been detected in a variety of tissues and cell types, including T cells, B cells, macrophages, dendritic cells, and non-hematopoietic cells (including endothelial cells, hepatocytes, muscle cells, and placenta). CD274/PD-L1 expression is associated with suppression of anti-tumor immune activity. Cancer cells such as HCC cells exploit this immune checkpoint by upregulating PD-L1 expression, resulting in dysfunction of proximal T cells' anti-tumor immunity. Studies correlating PD-L1 expression in tumors or hematologic malignancies with disease outcomes have shown that PD-L1 expression is strongly associated with poor prognosis in all types of lymphoma/leukemia, hematologic malignancies, breast cancer, lung cancer, colon cancer, ovarian cancer, melanoma, bladder cancer, liver cancer, salivary gland cancer, gastric cancer, neuroglioma, thyroid cancer, thymic epithelial cancer, head cancer, kidney cancer, pancreatic cancer, and neck cancer.
CD274/PD-L1表達還與逃避慢性感染所涉及的免疫反應有關,例如病毒(例如HIV、HBV、HCV和HTLV等)、細菌(例如幽門螺桿菌等)和寄生蟲(例如曼氏血吸蟲)。CD274/PD-L1 expression has also been implicated in evading immune responses involved in chronic infections, such as viruses (e.g., HIV, HBV, HCV, and HTLV, etc.), bacteria (e.g., Helicobacter pylori, etc.), and parasites (e.g., Schistosoma mansoni).
因此,本發明提供了新的RNAi劑減少CD274/PD-L1水平並治療CD274/PD-L1相關疾病、病症和狀況,例如感染病例如慢性細胞內感染性疾病,例如病毒性疾病,例如肝炎感染,或者細菌感染,例如結核病感染;以及癌症或血液系統惡性腫瘤。Therefore, the present invention provides novel RNAi agents to reduce CD274/PD-L1 levels and treat CD274/PD-L1 related diseases, disorders and conditions, such as infectious diseases such as chronic intracellular infectious diseases, such as viral diseases, such as hepatitis infection, or bacterial infections, such as tuberculosis infection; as well as cancer or hematological malignancies.
總體而言,本公開內容介紹了新型PD-L1基因特異性 RNAi劑、包括PD-L1 RNAi 劑的組合物以及使用本文所述的PD -L1 RNAi 劑和包括PD-L1 RNAi 劑的組合物在體外和/或體內抑制PD-L1基因表達的方法。本文所述的PD-L1 RNAi 劑可選擇性且有效地降低、抑制或沉默受試者(例如人類或動物受試者)中PD-L1基因的表達。In general, the present disclosure introduces novel PD-L1 gene-specific RNAi agents, compositions comprising PD-L1 RNAi agents, and methods of inhibiting PD-L1 gene expression in vitro and/or in vivo using the PD-L1 RNAi agents and compositions comprising PD-L1 RNAi agents described herein. The PD-L1 RNAi agents described herein can selectively and effectively reduce, inhibit, or silence the expression of the PD-L1 gene in a subject (e.g., a human or animal subject).
根據本發明的一個方面,提供了抑制PD-L1表達的雙鏈核糖核酸(dsRNA)劑,其中,所述dsRNA劑包括一條有義鏈和一條反義鏈,其中,所述有義鏈包含與SEQ ID NO:1或3的核苷酸序列相差不超過1、2或3個核苷酸的至少15個連續核苷酸,所述反義鏈包含與SEQ ID NO:2或4的核苷酸序列相差不超過1、2或3個核苷酸的至少15個連續核苷酸,其中,所述有義鏈和所述反義鏈可以部分、基本或完全互補。According to one aspect of the present invention, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting PD-L1 expression is provided, wherein the dsRNA agent comprises a sense chain and an antisense chain, wherein the sense chain comprises at least 15 consecutive nucleotides that differ from the nucleotide sequence of SEQ ID NO: 1 or 3 by no more than 1, 2 or 3 nucleotides, and the antisense chain comprises at least 15 consecutive nucleotides that differ from the nucleotide sequence of SEQ ID NO: 2 or 4 by no more than 1, 2 or 3 nucleotides, wherein the sense chain and the antisense chain may be partially, substantially or completely complementary to each other.
在某些實施方案中,所述dsRNA劑包括形成雙鏈區的有義鏈和反義鏈,其中所述反義鏈包括與PD-L1 RNA轉錄物互補的區域,所述互補的區域包含與表1-3中列出的任一反義序列相差不超過1、2或3個核苷酸的至少15個連續核苷酸。在某些實施方案中,dsRNA劑包括形成雙鏈區的有義鏈和反義鏈,其中所述反義鏈包括與PD-L1 RNA轉錄物互補的區域,所述互補的區域包含來自表1-3中列出的任一反義序列中的至少15個連續核苷酸。In certain embodiments, the dsRNA agent comprises a sense strand and an antisense strand forming a double-stranded region, wherein the antisense strand comprises a region complementary to a PD-L1 RNA transcript, the complementary region comprising at least 15 consecutive nucleotides that differ from any one of the antisense sequences listed in Tables 1-3 by no more than 1, 2, or 3 nucleotides. In certain embodiments, the dsRNA agent comprises a sense strand and an antisense strand forming a double-stranded region, wherein the antisense strand comprises a region complementary to a PD-L1 RNA transcript, the complementary region comprising at least 15 consecutive nucleotides from any one of the antisense sequences listed in Tables 1-3.
在某些實施方案中,所述dsRNA劑包括一條有義鏈和一條反義鏈,所述反義鏈中的核苷酸位置2至18包括與PD-L1 RNA轉錄物互補的區域,其中所述互補的區域包括與表1-3任一個中列出的反義序列之一相差0、1、2或3個核苷酸的至少15、16、17、18、19、20或21個連續核苷酸,並且任選地包括靶向配體。In certain embodiments, the dsRNA agent comprises a sense strand and an antisense strand, wherein nucleotide positions 2 to 18 in the antisense strand comprise a region complementary to a PD-L1 RNA transcript, wherein the complementary region comprises at least 15, 16, 17, 18, 19, 20, or 21 consecutive nucleotides that differ by 0, 1, 2, or 3 nucleotides from one of the antisense sequences listed in any one of Tables 1-3, and optionally comprises a targeting ligand.
在某些實施方案中,提供了用於抑制PD-L1表達的雙鏈核糖核酸(dsRNA)劑,其中所述dsRNA劑包括有義鏈和反義鏈,其中所述有義鏈包含與SEQ ID NO:1所示核苷酸序列中的核苷酸64-94、67-97、71-101、72-102、73-103、71-103、498-528、552-582、553-583、707-737、713-743的核苷酸序列中的任一個相差0、1、2或3個核苷酸的至少15、16、17、18、19、20或21個連續核苷酸,並且反義鏈包含與SEQ ID NO:2的相應核苷酸序列相差0、1、2或3個核苷酸的至少15、16、17、18、19、20或21個連續核苷酸,其中有義鏈和反義鏈彼此可以部分、基本或完全互補。In certain embodiments, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting PD-L1 expression is provided, wherein the dsRNA agent comprises a sense chain and an antisense chain, wherein the sense chain comprises at least 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides that differ by 0, 1, 2 or 3 nucleotides from any one of the nucleotide sequences of nucleotides 64-94, 67-97, 71-101, 72-102, 73-103, 71-103, 498-528, 552-582, 553-583, 707-737, 713-743 in the nucleotide sequence shown in SEQ ID NO: 1, and the antisense chain comprises at least 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides that differ by 0, 1, 2 or 3 nucleotides from any one of the nucleotide sequences of nucleotides 64-94, 67-97, 71-101, 72-102, 73-103, 71-103, 498-528, 552-582, 553-583, 707-737, 713-743 in the nucleotide sequence shown in SEQ ID NO: The corresponding nucleotide sequence of NO:2 differs by 0, 1, 2 or 3 nucleotides in at least 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides, wherein the sense strand and the antisense strand may partially, substantially or completely complement each other.
在某些實施方案中,提供了用於抑制PD-L1表達的雙鏈核糖核酸(dsRNA)劑,其中有義鏈包含與SEQ ID NO : 1所示核苷酸序列中的核苷酸69-89、71-89、72-92、74-92、76-96、78-96、77-97、79-97、78-98、80-98、76-98、72-98、503-523、505-523、557-577、559-577、558-578、560-578、712-732、714-732、718-738、720-738的核苷酸序列中的任一個相差0、1、2或3個核苷酸的至少15、16、17、18、19、20或21個連續的核苷酸,且反義鏈包含與SEQ ID NO:2的相應核苷酸序列相差 0、1、2或3個核苷酸的至少15、16、17、18、19、20 或 21 個連續核苷酸。In certain embodiments, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting PD-L1 expression is provided, wherein the sense strand comprises the same sequence as SEQ ID NO: 1, wherein the antisense strand comprises at least 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides that differ by 0, 1, 2 or 3 nucleotides from any one of the nucleotide sequences of nucleotides 69-89, 71-89, 72-92, 74-92, 76-96, 78-96, 77-97, 79-97, 78-98, 80-98, 76-98, 72-98, 503-523, 505-523, 557-577, 559-577, 558-578, 560-578, 712-732, 714-732, 718-738, 720-738, and the antisense strand comprises at least 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides that differ by 0, 1, 2 or 3 nucleotides from the corresponding nucleotide sequence of SEQ ID NO: 2. At least 15, 16, 17, 18, 19, 20 or 21 consecutive nucleotides of 0, 1, 2 or 3 nucleotides.
在某些實施方案中,PD-L1 RNA轉錄物是SEQ ID NO:1。In certain embodiments, the PD-L1 RNA transcript is SEQ ID NO: 1.
在某些實施方案中,dsRNA劑的反義鏈至少基本與 SEQ ID NO: 1 的任一個靶區域互補,並在表1-3中的任一個中提供。在某些實施方案中,dsRNA劑的反義鏈完全與SEQ ID NO: 1的任一個靶區域互補,並在表1-3中的任一個中提供。在某些實施方案中,dsRNA劑包括表1-3中的任一個中所列出的有義鏈序列,其中所述有義鏈序列至少基本上與dsRNA劑中的反義鏈序列互補。在某些實施方案中,dsRNA劑包括表1-3中的任一個中所列出的有義鏈序列,其中所述有義鏈序列完全與dsRNA劑中的反義鏈序列互補。在某些實施方案中,dsRNA劑包括表1-3中的任一個中所列出的反義鏈序列。在某些實施方案中,dsRNA劑包括表1-3中的任一個中作為雙鏈體序列列出的序列。In certain embodiments, the antisense strand of the dsRNA agent is at least substantially complementary to any one of the target regions of SEQ ID NO: 1 and is provided in any one of Tables 1-3. In certain embodiments, the antisense strand of the dsRNA agent is completely complementary to any one of the target regions of SEQ ID NO: 1 and is provided in any one of Tables 1-3. In certain embodiments, the dsRNA agent comprises a sense strand sequence listed in any one of Tables 1-3, wherein the sense strand sequence is at least substantially complementary to the antisense strand sequence in the dsRNA agent. In certain embodiments, the dsRNA agent comprises a sense strand sequence listed in any one of Tables 1-3, wherein the sense strand sequence is completely complementary to the antisense strand sequence in the dsRNA agent. In some embodiments, the dsRNA agent comprises an antisense strand sequence listed in any one of Tables 1-3. In some embodiments, the dsRNA agent comprises a sequence listed as a duplex sequence in any one of Tables 1-3.
在某些實施方案中,dsRNA試劑包括至少一個修飾核苷酸。在某些實施方案中,反義鏈的所有或基本上所有核苷酸都是修飾核苷酸。在某些實施方案中,至少一種修飾的核苷酸包括:2'-O-甲基核苷酸、2'-氟核苷酸、2'-脫氧核苷酸、2'3'-seco核苷酸模擬物、鎖定核苷酸、解鎖核酸核苷酸(UNA)、乙二醇核酸核苷酸(GNA)、2'-F-阿拉伯糖核苷酸、2'-甲氧基乙基核苷酸、脫鹼基核苷酸、核糖醇、反向核苷酸、反向脫鹼基核苷酸、反向2'-Ome核苷酸、反向2'-脫氧核苷酸、異甘露醇核苷酸、 2'-氨基修飾的核苷酸、2'-烷基修飾的核苷酸、嗎啉代核苷酸和3'-OMe核苷酸、包括5'-硫代磷酸酯基團的核苷酸、或連接到膽固醇衍生物或十二烷酸雙癸醯胺基團的末端核苷酸、2'-氨基修飾的核苷酸、亞磷醯胺、或者包括非天然鹼基的核苷酸。In some embodiments, the dsRNA reagent includes at least one modified nucleotide. In some embodiments, all or substantially all nucleotides of the antisense strand are modified nucleotides. In some embodiments, at least one modified nucleotide includes: 2'-O-methyl nucleotide, 2'-fluoro nucleotide, 2'-deoxy nucleotide, 2'3'-seco nucleotide mimetic, locked nucleotide, unblocked nucleic acid nucleotide (UNA), glycol nucleic acid nucleotide (GNA), 2'-F-arabinose nucleotide, 2'-methoxyethyl nucleotide, debasic nucleotide, ribitol, reverse nucleotide, reverse debasic nucleotide, reverse 2'-Ome nucleotide, reverse 2'-deoxy nucleotide, isomannitol nucleotide, 2'-amino modified nucleotides, 2'-alkyl modified nucleotides, morpholino nucleotides and 3'-OMe nucleotides, nucleotides comprising a 5'-phosphorothioate group, or a terminal nucleotide linked to a cholesterol derivative or a dodecanoic acid bisdecylamide group, a 2'-amino modified nucleotide, a phosphoramidite, or a nucleotide comprising an unnatural base.
在某些實施方案中,dsRNA劑在引導鏈的5΄端包含 E-乙烯基膦酸酯核苷酸。In certain embodiments, the dsRNA agent comprises an E-vinylphosphonate nucleotide at the 5΄ end of the guide strand.
在某些實施方案中,dsRNA劑包括至少一個硫代磷酸酯核苷間鍵。在某些實施方案中,有義鏈包括至少一個硫代磷酸酯核苷間鍵。在某些實施方案中,反義鏈包括至少一個硫代磷酸酯核苷間鍵。在某些實施方案中,有義鏈包括1、2、3、4、5或6個硫代磷酸酯核苷間鍵。在某些實施方案中,反義鏈包括1、2、3、4、5或6個硫代磷酸酯核苷間鍵。In some embodiments, the dsRNA agent includes at least one phosphorothioate nucleoside bond. In some embodiments, the sense strand includes at least one phosphorothioate nucleoside bond. In some embodiments, the antisense strand includes at least one phosphorothioate nucleoside bond. In some embodiments, the sense strand includes 1, 2, 3, 4, 5 or 6 phosphorothioate nucleoside bonds. In some embodiments, the antisense strand includes 1, 2, 3, 4, 5 or 6 phosphorothioate nucleoside bonds.
在某些實施方案中,有義鏈和反義鏈的全部或基本上全部核苷酸都是修飾核苷酸。在某些實施方案中,反義鏈包含15個或更多個獨立地選自2'-O-甲基核苷酸、2'-氟核苷酸和UNA修飾核苷酸的修飾核苷酸,其中少於6個修飾核苷酸是2'-氟核苷酸。在某些實施方案中,反義鏈包含3個或5個2'-氟核苷酸,優選地,反義鏈包含5個2'-氟核苷酸。在某些實施方案中,有義鏈包含15個或更多個獨立地選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中少於4個修飾核苷酸是2'-氟核苷酸。在某些實施方案中,有義鏈包含3個2'-氟核苷酸。在某些實施方案中,反義鏈包含15個或更多個獨立地選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中至少14個修飾核苷酸為2'-O-甲基核苷酸,且從反義鏈5'端的第一個匹配位置算起位置2、5、7、11、12、14、16和/或18處的核苷酸獨立地為2'-氟核苷酸。在某些實施方案中,反義鏈包含至少一個UNA修飾核苷酸和5個2'-氟核苷酸。在某些實施方案中,反義鏈包含位置7處的一個UNA修飾核苷酸和從5'端的第一個匹配位置算起位置2、5、12、14和16處的5個2'-氟核苷酸,其餘為2'-O-甲基核苷酸。在某些實施方案中,反義鏈包含位置7處的一個UNA修飾的核苷酸和從5'端的第一個匹配位置開始算起位置2、5、12、14和18處的5個2'-氟核苷酸,以及其餘的2'-O-甲基核苷酸。在某些實施方案中,反義鏈包含從5'端的第一個匹配位置開始算起位置2、7、12、14和16處的5個2'-氟核苷酸,以及其餘的2'-O-甲基核苷酸。在某些實施方案中,反義鏈包含從5'端的第一個匹配位置開始算起位置2、7、11、14和16處的5個2'-氟核苷酸,以及其餘的2'-O-甲基核苷酸。在某些實施方案中,反義鏈包含從5'端第一個匹配位置算起在位置2、5、12、14和16處各5個2'-氟核苷酸,其餘為2'-O-甲基核苷酸。 在某些實施方案中,反義鏈包含從5'端第一個匹配位置算起在位置2、5、12、14和18處各5個2'-氟核苷酸,其餘為2'-O-甲基核苷酸。 在某些實施方案中,所述有義鏈包含15個或更多個獨立地選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,優選地,其中至少18個修飾核苷酸為2'-O-甲基核苷酸,且從所述有義鏈的3'端的第一個匹配位置開始算起位置9、11和/或13處的核苷酸為2'-氟核苷酸。在某些實施方案中,所述有義鏈包含至少18個修飾核苷酸為2'-O-甲基核苷酸,且從所述有義鏈的3'端的第一個匹配位置開始算起位置8、11和/或13處的核苷酸為2'-氟核苷酸。在某些實施方案中,所述修飾有義鏈為表2-3之一中所示的修飾有義鏈序列。在某些實施方案中,所述修飾反義鏈為表2-3之一中所示的修飾反義鏈序列。In some embodiments, all or substantially all nucleotides of the sense strand and the antisense strand are modified nucleotides. In some embodiments, the antisense strand comprises 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides, 2'-fluoro nucleotides and UNA modified nucleotides, wherein less than 6 modified nucleotides are 2'-fluoro nucleotides. In some embodiments, the antisense strand comprises 3 or 5 2'-fluoro nucleotides, preferably, the antisense strand comprises 5 2'-fluoro nucleotides. In some embodiments, the sense strand comprises 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoro nucleotides, wherein less than 4 modified nucleotides are 2'-fluoro nucleotides. In some embodiments, the sense strand comprises 3 2'-fluoro nucleotides. In certain embodiments, the antisense chain comprises 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoro nucleotides, wherein at least 14 modified nucleotides are 2'-O-methyl nucleotides, and the nucleotides at positions 2, 5, 7, 11, 12, 14, 16 and/or 18 from the first matching position at the 5' end of the antisense chain are independently 2'-fluoro nucleotides. In certain embodiments, the antisense chain comprises at least one UNA modified nucleotide and 5 2'-fluoro nucleotides. In certain embodiments, the antisense chain comprises one UNA modified nucleotide at position 7 and 5 2'-fluoro nucleotides at positions 2, 5, 12, 14 and 16 from the first matching position at the 5' end, and the rest are 2'-O-methyl nucleotides. In certain embodiments, the antisense chain comprises a UNA-modified nucleotide at position 7 and five 2'-fluoro nucleotides at positions 2, 5, 12, 14 and 18, starting from the first matching position at the 5' end, and the remaining 2'-O-methyl nucleotides. In certain embodiments, the antisense chain comprises five 2'-fluoro nucleotides at positions 2, 7, 12, 14 and 16, starting from the first matching position at the 5' end, and the remaining 2'-O-methyl nucleotides. In certain embodiments, the antisense chain comprises five 2'-fluoro nucleotides at positions 2, 7, 11, 14 and 16, starting from the first matching position at the 5' end, and the remaining 2'-O-methyl nucleotides. In certain embodiments, the antisense chain comprises 5 2'-fluoro nucleotides at positions 2, 5, 12, 14 and 16, respectively, counting from the first matching position at the 5' end, and the rest are 2'-O-methyl nucleotides. In certain embodiments, the antisense chain comprises 5 2'-fluoro nucleotides at positions 2, 5, 12, 14 and 18, respectively, counting from the first matching position at the 5' end, and the rest are 2'-O-methyl nucleotides. In certain embodiments, the sense chain comprises 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoro nucleotides, preferably, at least 18 of the modified nucleotides are 2'-O-methyl nucleotides, and the nucleotides at positions 9, 11 and/or 13, counting from the first matching position at the 3' end of the sense chain, are 2'-fluoro nucleotides. In some embodiments, the sense chain comprises at least 18 modified nucleotides that are 2'-O-methyl nucleotides, and the nucleotides at positions 8, 11 and/or 13, starting from the first matching position at the 3' end of the sense chain, are 2'-fluoro nucleotides. In some embodiments, the modified sense chain is a modified sense chain sequence shown in one of Tables 2-3. In some embodiments, the modified antisense chain is a modified antisense chain sequence shown in one of Tables 2-3.
在某些實施方案中,dsRNA試劑包括至少一個修飾的核苷酸,並且還包括一個或多個靶向基團或連接基團。在某些實施方案中,一個或多個靶向基團或連接基團與有義鏈綴合。在某些實施方案中,靶向基團或連接基團包括 N-乙醯半乳糖胺 ( GalNAc ) 。In some embodiments, the dsRNA reagent includes at least one modified nucleotide and further includes one or more targeting groups or linking groups. In some embodiments, one or more targeting groups or linking groups are conjugated to a sense chain. In some embodiments, the targeting group or linking group includes N-acetylgalactosamine (GalNAc).
在某些實施方案中,靶向基團包括具有以下結構: 式1; 每個n'' 獨立地選自 1 或 2。 In certain embodiments, the targeting group comprises a moiety having the following structure: Formula 1; each n'' is independently selected from 1 or 2.
在某些實施方案中,靶向基團具有以下結構:
在某些實施方案中,dsRNA試劑包括與有義鏈 5' 末端綴合的靶向基團。在某些實施方案中,dsRNA試劑包括與有義鏈 3' 末端綴合的靶向基團。In some embodiments, the dsRNA reagent comprises a targeting group attached to the 5' end of the sense strand. In some embodiments, the dsRNA reagent comprises a targeting group attached to the 3' end of the sense strand.
在某些實施方案中,反義鏈在 3' 末端包括一個反向的脫鹼基殘基。In certain embodiments, the antisense strand includes an inverted debasing residue at the 3' terminus.
在某些實施方案中,有義鏈在3'或/和5'末端包含一個或兩個反向脫鹼基殘基和/或一個或兩個imann殘基。在某些實施方案中,有義鏈的每個末端分別包含一個反向脫鹼基殘基。在某些實施方案中,有義鏈的每個末端分別包含一個imann殘基。在一些實施方案中,一個或多個反向脫鹼基殘基或一個或多個imann殘基通過硫代磷酸酯鍵結合到有義鏈的任一端或兩端。在一些實施方案中,靶向基團進一步通過硫代磷酸酯鍵結合到有義鏈的任一端。在一些實施方案中,靶向基團進一步通過硫代磷酸酯鍵結合到有義鏈的 5’ 端。在某些實施方案中,有義鏈的 5’ 末端包括一個反向脫鹼基殘基或imann殘基,其中反向脫鹼基殘基或imann殘基通過硫代磷酸酯鍵連接到有義鏈的核苷酸序列的 5’ 末端的相鄰核苷酸。在某些實施方案中,所述有義鏈還包括連接至有義鏈5’末端的反向脫鹼基殘基或imann殘基的靶向基團,其中靶向基團通過硫代磷酸酯鍵連接至相鄰的反向脫鹼基殘基或imann殘基,並且可選地靶向基團為N-乙醯半乳糖胺(GalNAc)。In some embodiments, the sense chain comprises one or two reverse debasing residues and/or one or two imann residues at the 3' or/and 5' ends. In some embodiments, each end of the sense chain comprises a reverse debasing residue. In some embodiments, each end of the sense chain comprises an imann residue. In some embodiments, one or more reverse debasing residues or one or more imann residues are bound to either or both ends of the sense chain via a phosphorothioate bond. In some embodiments, the targeting group is further bound to either end of the sense chain via a phosphorothioate bond. In some embodiments, the targeting group is further bound to the 5' end of the sense chain via a phosphorothioate bond. In certain embodiments, the 5' end of the sense chain includes a reverse debasing residue or imann residue, wherein the reverse debasing residue or imann residue is linked to the adjacent nucleotide at the 5' end of the nucleotide sequence of the sense chain through a phosphorothioate bond. In certain embodiments, the sense chain further includes a targeting group linked to the reverse debasing residue or imann residue at the 5' end of the sense chain, wherein the targeting group is linked to the adjacent reverse debasing residue or imann residue through a phosphorothioate bond, and optionally the targeting group is N-acetylgalactosamine (GalNAc).
在某些實施方案中,dsRNA試劑具有兩個平端。在某些實施方案中,至少一條鏈包含至少 1 個核苷酸的 3' 突出端。在某些實施方案中,至少一條鏈包含至少 2 個核苷酸的 3' 突出端。In some embodiments, the dsRNA reagent has two blunt ends. In some embodiments, at least one strand comprises a 3' overhang of at least 1 nucleotide. In some embodiments, at least one strand comprises a 3' overhang of at least 2 nucleotides.
在一些實施方案中,經修飾的有義鏈具有表 2-3 中任一個所示的修飾模式。在一些實施方案中,經修飾的反義鏈具有表 2-3 中任一個所示的修飾模式。在一些實施方案中,經修飾的有義鏈是表 2-3 中任一個所示的經修飾的有義鏈序列。在一些實施方案中,經修飾的反義鏈是表 2-3 中任一個所示的經修飾的反義鏈序列。In some embodiments, the modified sense chain has a modification pattern shown in any one of Tables 2-3. In some embodiments, the modified antisense chain has a modification pattern shown in any one of Tables 2-3. In some embodiments, the modified sense chain is a modified sense chain sequence shown in any one of Tables 2-3. In some embodiments, the modified antisense chain is a modified antisense chain sequence shown in any one of Tables 2-3.
在某些實施方案中,dsRNA包含選自 AV01002、AV00947、AV00948、AV00949、AV00950、AV00969、AV01004、AV00974、AV00981、AV01012 的雙鏈體,其中雙鏈體任選地包括靶向配體。在某些實施方案中,dsRNA包含選自以下組的雙鏈體 AD00883、AD01053、AD01053 - 1、AD00884、 AD00884-1、AD00885、AD00885-1、AD01054、AD01055、AD01055-1、AD00887、AD00888、AD00889、AD01066、AD01066-1、AD01067、AD01067-1。In certain embodiments, the dsRNA comprises a duplex selected from AV01002, AV00947, AV00948, AV00949, AV00950, AV00969, AV01004, AV00974, AV00981, AV01012, wherein the duplex optionally includes a targeting ligand. In certain embodiments, the dsRNA comprises a duplex selected from the group consisting of AD00883, AD01053, AD01053-1, AD00884, AD00884-1, AD00885, AD00885-1, AD01054, AD01055, AD01055-1, AD00887, AD00888, AD00889, AD01066, AD01066-1, AD01067, AD01067-1.
根據本發明的另一個方面,提供了一種用於抑制PD-L1表達的雙鏈核糖核酸(dsRNA)劑,其中,所述dsRNA劑包括一條有義鏈和一條反義鏈,其中,所述有義鏈與所述反義鏈互補,其中,所述反義鏈包含與部分PD-L1 RNA轉錄物互補的區域,其中,每條鏈的長度約為15至約30個核苷酸,其中,所述有義鏈包含的序列可以用式(I)表示: 5′-(N′ L) n′N′ LN′ LN′ LN′ LN′ FN′ LN′ FN′ LN′ N1N′ N2N′ LN′ LN′ LN′ LN′ L(N′ L) m′-3′ (I); 其中: 每個N′ F代表2'-氟修飾的核苷酸;每個N′ N1和N′ N2獨立地表示修飾或未修飾的核苷酸;每個N′ L獨立地表示修飾或未修飾的核苷酸但不表示2'-氟修飾的核苷酸,並且m′和n′各自獨立地為0至7的整數。 According to another aspect of the present invention, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting PD-L1 expression is provided, wherein the dsRNA agent comprises a sense chain and an antisense chain, wherein the sense chain is complementary to the antisense chain, wherein the antisense chain comprises a region complementary to a portion of a PD-L1 RNA transcript, wherein each chain is about 15 to about 30 nucleotides in length, wherein the sequence comprised by the sense chain can be represented by formula (I): 5′-(N′ L ) n′ N′ L N′ L N′ L N ′ L N′ F N′ L N′ F N′ L N′ N1 N′ N2 N ′ L N′ L N′ L N′ L N′ L (N′ L ) m′ -3′ (I); wherein: each N′ F represents a 2'-fluorine-modified nucleotide; each N'N1 and N'N2 independently represents a modified or unmodified nucleotide; each N'L independently represents a modified or unmodified nucleotide but does not represent a 2'-fluorine-modified nucleotide, and m' and n' are each independently an integer from 0 to 7.
在某些實施方案中,N′ N1和N′ N2僅包括一個2'‑氟修飾的核苷酸。 In certain embodiments, N'N1 and N'N2 include only one 2'-fluorine modified nucleotide.
在某些實施方案中,N′ N1獨立地代表2'-氟修飾的核苷酸。 In certain embodiments, N′ and N1 independently represent 2′-fluoro modified nucleotides.
在某些實施方案中,N' N2獨立地代表2'-氟修飾的核苷酸。 In certain embodiments, N' and N2 independently represent 2'-fluoro modified nucleotides.
在某些實施方案中,m′為2且n′為4,或m′為2且n′為2。在某些實施方案中,m′為1且n′為4,或m′為1且n′為2。在某些實施方案中,m′為0且n′為4,或m′為0且n′為2。In some embodiments, m' is 2 and n' is 4, or m' is 2 and n' is 2. In some embodiments, m' is 1 and n' is 4, or m' is 1 and n' is 2. In some embodiments, m' is 0 and n' is 4, or m' is 0 and n' is 2.
在某些實施方案中,dsRNA劑包括與有義鏈5'末端綴合的靶向基團,優選地,靶向基團為選自前述GLO-1至GLO-16和GLS-1*至GLS-16*中的任一種,更優選地,靶向基團為前述GLS-15*。在某些實施方案中,dsRNA劑包括與有義鏈3'末端綴合的靶向基團。在某些實施方案中,反義鏈在3'末端包括一個反向脫鹼基殘基。在某些實施方案中,有義鏈在3'或/和5'末端包括一個或兩個反向脫鹼基殘基和/或一個或兩個imann殘基。在某些實施方案中,有義鏈的3'和5'末端各自獨立地包括一個反向脫鹼基殘基。在某些實施方案中,有義鏈的3'和5'末端各自獨立地包括一個imann殘基。在某些實施方案中,所述包含在有義鏈3'和5'末端的兩個反向脫鹼基殘基,並且3'或5'末端的殘基進一步與靶向基團綴合,所述靶向基團優選為前述的GLS-15*。在某些實施方案中,所述包含在有義鏈3'和5'末端的兩個imann殘基,並且3'或5'末端的殘基進一步與靶向基團綴合,所述靶向基團優選為前述的GLS-15*。在某些實施方案中,在有義鏈的 5' 末端包括一個反向脫鹼基殘基或imann殘基,其中反向脫鹼基殘基或imann殘基通過硫代磷酸酯鍵與有義鏈的核苷酸序列的5’末端的相鄰核苷酸連接。在某些實施方案中,有義鏈還包括與有義鏈的 5’ 末端的反向脫鹼基殘基或imann殘基連接的靶向基團,其中靶向基團通過硫代磷酸酯鍵與相鄰的反向脫鹼基殘基或imann殘基連接,並且可選地靶向基團為 N-乙醯半乳糖胺 (GalNAc)。In some embodiments, the dsRNA agent includes a targeting group fused to the 5' end of the sense chain, preferably, the targeting group is selected from any one of the aforementioned GLO-1 to GLO-16 and GLS-1* to GLS-16*, more preferably, the targeting group is the aforementioned GLS-15*. In some embodiments, the dsRNA agent includes a targeting group fused to the 3' end of the sense chain. In some embodiments, the antisense chain includes a reverse debasing residue at the 3' end. In some embodiments, the sense chain includes one or two reverse debasing residues and/or one or two imann residues at the 3' or/and 5' ends. In some embodiments, the 3' and 5' ends of the sense chain each independently include a reverse debasing residue. In certain embodiments, the 3' and 5' ends of the sense chain each independently include an imann residue. In certain embodiments, the two reverse debasing residues contained at the 3' and 5' ends of the sense chain, and the residue at the 3' or 5' end is further conjugated to a targeting group, and the targeting group is preferably the aforementioned GLS-15*. In certain embodiments, the two imann residues contained at the 3' and 5' ends of the sense chain, and the residue at the 3' or 5' end is further conjugated to a targeting group, and the targeting group is preferably the aforementioned GLS-15*. In certain embodiments, the 5' end of the sense chain includes a reverse debasing residue or imann residue, wherein the reverse debasing residue or imann residue is linked to the adjacent nucleotide at the 5' end of the nucleotide sequence of the sense chain through a phosphorothioate bond. In certain embodiments, the sense chain further includes a targeting group linked to the reverse debasing residue or imann residue at the 5' end of the sense chain, wherein the targeting group is linked to the adjacent reverse debasing residue or imann residue through a phosphorothioate bond, and optionally the targeting group is N-acetylgalactosamine (GalNAc).
根據本發明的另一方面,提供了一種用於抑制PD-L1表達的雙鏈核糖核酸(dsRNA)劑,其中,所述dsRNA劑包括一條有義鏈和一條反義鏈,其中,所述有義鏈與所述反義鏈互補,其中,所述反義鏈包含與PD-L1 RNA轉錄物互補的區域,其中,每條鏈的長度約為18至30個核苷酸,其中,所述反義鏈包含的序列可由式(II)表示: 3′-(N L) nN M1N LN M2N LN FN LN M3N M4N LN LN LN M5N LN M6N LN LN FN L-5′ (II); 其中:每個N F代表2'-氟修飾的核苷酸;每個N M1、N M2、N M3、N M4、N M5和N M6獨立地表示修飾或未修飾的核苷酸;每個N L獨立地表示修飾或未修飾的核苷酸,但不表示2'-氟修飾的核苷酸,並且n為0至7的整數。 According to another aspect of the present invention, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting PD-L1 expression is provided, wherein the dsRNA agent comprises a sense chain and an antisense chain, wherein the sense chain is complementary to the antisense chain, wherein the antisense chain comprises a region complementary to the PD - L1 RNA transcript, wherein the length of each chain is about 18 to 30 nucleotides, wherein the sequence comprised by the antisense chain can be represented by formula ( II): 3′-(NL)nNM1NLNM2NLNFNLNM3NM4NLNLNLNM5NLNM6NLNLNFNL - 5 ′ ( II ) ; wherein : each NF represents a 2′-fluorine - modified nucleotide ; each NM1 , NM2 , NM3 , NM4 , N M5 and N M6 independently represent modified or unmodified nucleotides; each NL independently represents a modified or unmodified nucleotide, but does not represent a 2'-fluoro-modified nucleotide, and n is an integer from 0 to 7.
在一些實施例中,N M1、N M2、N M3、N M4、N M5和N M6僅有三個2'-氟修飾的核苷酸。 In some embodiments, N M1 , N M2 , N M3 , N M4 , N M5 and N M6 have only three 2'-fluoro modified nucleotides.
在某些實施方案中,N M2、N M3和N M5各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M3 , and N M5 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M2、N M4和N M5各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M4 , and N M5 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M1、N M3和N M6各自獨立地代表2'-氟修飾的核苷酸。 In certain embodiments, N M1 , N M3 , and N M6 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M2、N M3和N M6各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M3 , and N M6 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M2、N M4和N M6各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M4 , and N M6 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M1、N M3和N M6各自獨立地表示2'-氟修飾的核苷酸,並且N M5表示UNA修飾的核苷酸。 In certain embodiments, NM1 , NM3 , and NM6 each independently represent a 2'-fluoro modified nucleotide, and NM5 represents a UNA modified nucleotide.
在某些實施方案中,N M2、N M3和N M6各自獨立地表示2'-氟修飾的核苷酸,並且N M5表示UNA修飾的核苷酸。 In certain embodiments, N M2 , N M3 , and N M6 each independently represent a 2'-fluoro modified nucleotide, and N M5 represents a UNA modified nucleotide.
在某些實施方案中,N M2、N M4和N M6各自獨立地表示2'-氟修飾的核苷酸,並且N M5表示UNA修飾的核苷酸。 In certain embodiments, N M2 , N M4 , and N M6 each independently represent a 2'-fluoro modified nucleotide, and N M5 represents a UNA modified nucleotide.
在一些實施例中,n為1,或n為2,或n為3,或n為5。In some embodiments, n is 1, or n is 2, or n is 3, or n is 5.
根據本發明的另一個方面,提供了一種用於抑制PD-L1表達的雙鏈核糖核酸(dsRNA)劑,其中所述dsRNA劑包括一條有義鏈和一條反義鏈,其中所述有義鏈和反義鏈形成dsRNA雙鏈體,其中所述有義鏈與反義鏈互補,其中所述反義鏈包含與PD-L1 RNA轉錄物互補的區域,其中所述互補區域包含至少15個連續的核苷酸,其中所述dsRNA雙鏈體可由式(III)表示的: 有義鏈: 5′-(N′ L) n′N′ LN′ LN′ LN′ LN′ FN′ LN′ FN′ LN′ N1N′ N2N′ LN′ LN′ LN′ LN′ L(N′ L) m′-3′ 反義鏈: 3′-(N L) nN M1N LN M2N LN FN LN M3N M4N LN LN LN M5N LN M6N LN LN FN L-5′ (III); 其中: 每條鏈的長度約為18至30個核苷酸; 每個N F和N′ F獨立地代表2'-氟修飾的核苷酸;N M1、N M2、N M3、N M4、N M5、N M6、N′ N1和N′ N2各自獨立地代表修飾或未修飾的核苷酸;每個N L和N′ L獨立地代表修飾或未修飾的核苷酸但不代表2'-氟修飾的核苷酸,並且m′、n′和n各自獨立地為0至7的整數。 According to another aspect of the present invention, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting PD-L1 expression is provided, wherein the dsRNA agent comprises a sense chain and an antisense chain, wherein the sense chain and the antisense chain form a dsRNA duplex, wherein the sense chain is complementary to the antisense chain, wherein the antisense chain comprises a region complementary to the PD-L1 RNA transcript, wherein the complementary region comprises at least 15 consecutive nucleotides, wherein the dsRNA duplex can be represented by formula (III): Sense chain: 5′-(N′ L ) n′ N′ L N′ L N′ L N ′ L N′ F N′ L N′ F N′ L N′ N1 N ′ N2 N′ L N′ L N′ L N′ L N′ L (N′ L ) m′ -3′ Antisense chain : 3′-( NL ) nNM1NLNM2NLNFNLNM3NM4NLNLNLNM5NLNM6NLNLNFNL - 5 ′ ( III ) ; wherein: the length of each chain is approximately 18 to 30 nucleotides; each NF and N′F independently represents a 2'-fluorine- modified nucleotide ; NM1, NM2, NM3, NM4, NM5, NM6 , N′N1 and N′N2 independently represent a modified or unmodified nucleotide; each NL and N′L independently represents a modified or unmodified nucleotide but does not represent a 2'-fluorine-modified nucleotide , and m′, n′ and n are each independently integers from 0 to 7.
在一些實施例中,N M1、N M2、N M3、N M4、N M5和N M6只有三個2'-氟修飾的核苷酸,N' N1和N' N2僅包括一個2'‑氟修飾的核苷酸。 In some embodiments, N M1 , N M2 , N M3 , N M4 , N M5 and N M6 have only three 2'-fluoro modified nucleotides, and N'N1 and N'N2 include only one 2'-fluoro modified nucleotide.
在某些實施方案中,m′為2且n′為4,m′為2且n′為6,或m′為2且n′為2。在某些實施方案中,m′為1且n′為4,或m′為1且n′為2。在某些實施方案中,m′為0且n′為4,或m′為0且n′為2。在一些實施例中,n為1,或n為2,或n為3,或n為5。In some embodiments, m' is 2 and n' is 4, m' is 2 and n' is 6, or m' is 2 and n' is 2. In some embodiments, m' is 1 and n' is 4, or m' is 1 and n' is 2. In some embodiments, m' is 0 and n' is 4, or m' is 0 and n' is 2. In some embodiments, n is 1, or n is 2, or n is 3, or n is 5.
在某些實施方案中,N′ N1獨立地代表2'-氟修飾的核苷酸。 In certain embodiments, N′ and N1 independently represent 2′-fluoro modified nucleotides.
在某些實施方案中,N' N2獨立地代表2'-氟修飾的核苷酸。 In certain embodiments, N' and N2 independently represent 2'-fluoro modified nucleotides.
在某些實施方案中,N M2、N M3和N M5各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M3 , and N M5 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M2、N M4和N M5各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M4 , and N M5 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M1、N M3和N M6各自獨立地代表2'-氟修飾的核苷酸。 In certain embodiments, N M1 , N M3 , and N M6 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M2、N M3和N M6各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M3 , and N M6 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M2、N M4和N M6各自獨立地表示2'-氟修飾的核苷酸。 In certain embodiments, N M2 , N M4 , and N M6 each independently represent a 2'-fluoro modified nucleotide.
在某些實施方案中,N M1、N M3和N M6各自獨立地表示2'-氟修飾的核苷酸,並且N M5表示UNA修飾的核苷酸。 In certain embodiments, NM1 , NM3 , and NM6 each independently represent a 2'-fluoro modified nucleotide, and NM5 represents a UNA modified nucleotide.
在某些實施方案中,N M2、N M3和N M6各自獨立地表示2'-氟修飾的核苷酸,並且N M5表示UNA修飾的核苷酸。 In certain embodiments, N M2 , N M3 , and N M6 each independently represent a 2'-fluoro modified nucleotide, and N M5 represents a UNA modified nucleotide.
在某些實施方案中,N M2、N M4和N M6各自獨立地表示2'-氟修飾的核苷酸,並且N M5表示UNA修飾的核苷酸。 In certain embodiments, N M2 , N M4 , and N M6 each independently represent a 2'-fluoro modified nucleotide, and N M5 represents a UNA modified nucleotide.
在某些實施方案中,dsRNA劑包括與有義鏈5'末端綴合的靶向基團,優選地,靶向基團為選自前述GLO-1至GLO-16和GLS-1*至GLS-16*中的任一種,更優選地,靶向基團為前述GLS-15* 。在某些實施方案中,dsRNA劑包括與有義鏈5'末端綴合的靶向基團。在某些實施方案中,反義鏈在3'末端包括一個反向脫鹼基殘基。在某些實施方案中,有義鏈在3'或/和5'末端包括一個或兩個反向脫鹼基殘基和/或一個或兩個imann殘基。在某些實施方案中,有義鏈的3'和5'末端各自獨立地包括一個反向脫鹼基殘基。在某些實施方案中,有義鏈的3'和5'末端各自獨立地包括一個imann殘基。在某些實施方案中,所述包含在有義鏈3'和5'末端的兩個反向脫鹼基殘基,並且 3' 或5'末端的殘基進一步與靶向基團綴合,所述靶向基團優選為前述的GLS-15* 。在某些實施方案中,所述包含在有義鏈3'和5'末端兩個imann殘基,並且3'或5'末端的殘基進一步與靶向基團綴合,所述靶向基團優選為前述的GLS-15*。 在某些實施方案中,dsRNA試劑具有兩個平端。在某些實施方案中,至少一條鏈包含至少1個核苷酸的3'突出端。在某些實施方案中,至少一條鏈包含至少2個核苷酸的3'突出端。在一些實施方案中,一個或多個反向脫鹼基殘基或一個或多個imann殘基通過硫代磷酸酯鍵結合到有義鏈的任一端或兩端。在一些實施方案中,靶向基團進一步通過硫代磷酸酯鍵結合到有義鏈的任一端。在一些實施方案中,靶向基團進一步通過硫代磷酸酯鍵結合到有義鏈的 5’ 端。在某些實施方案中,有義鏈的 5’ 末端包括一個反向脫鹼基殘基或imann殘基,其中反向脫鹼基殘基或imann殘基通過硫代磷酸酯鍵連接到有義鏈的核苷酸序列的 5’ 末端的相鄰核苷酸。在某些實施方案中,所述有義鏈還包括與有義鏈5'末端的反向脫鹼基殘基或imann殘基連接的靶向基團,其中靶向基團通過硫代磷酸酯鍵與相鄰的反向脫鹼基殘基或imann殘基連接,並且可選地靶向基團是N-乙醯半乳糖胺 (GalNAc)。在上述dsRNA劑的一些實施方案中,與 PD-L1 mRNA 轉錄物的部分互補的區域包含至少 15、16、17、18或19個連續核苷酸,這些核苷酸與PD-L1 mRNA 轉錄物的上述任一靶區域的互補序列相差不超過 0、1、2 或 3 個核苷酸。在某些實施方案中,dsRNA 劑的反義鏈至少基本上與 SEQ ID NO: 1 的任一靶區域互補,並在表 1-3 中的任一個中提供。在上述 dsRNA 藥劑的一些實施方案中,PD-L1 mRNA 轉錄本是 SEQ ID NO: 1。In some embodiments, the dsRNA agent includes a targeting group fused to the 5' end of the sense chain, preferably, the targeting group is selected from any one of the aforementioned GLO-1 to GLO-16 and GLS-1* to GLS-16*, more preferably, the targeting group is the aforementioned GLS-15*. In some embodiments, the dsRNA agent includes a targeting group fused to the 5' end of the sense chain. In some embodiments, the antisense chain includes a reverse debasing residue at the 3' end. In some embodiments, the sense chain includes one or two reverse debasing residues and/or one or two imann residues at the 3' or/and 5' ends. In some embodiments, the 3' and 5' ends of the sense chain each independently include a reverse debasing residue. In some embodiments, the 3' and 5' ends of the sense chain each independently include an imann residue. In some embodiments, the two reverse debasing residues contained at the 3' and 5' ends of the sense chain, and the residue at the 3' or 5' end is further fused to a targeting group, and the targeting group is preferably the aforementioned GLS-15*. In some embodiments, the two imann residues contained at the 3' and 5' ends of the sense chain, and the residue at the 3' or 5' end is further fused to a targeting group, and the targeting group is preferably the aforementioned GLS-15*. In some embodiments, the dsRNA reagent has two blunt ends. In some embodiments, at least one chain includes a 3' overhang of at least 1 nucleotide. In some embodiments, at least one chain comprises a 3' overhang of at least 2 nucleotides. In some embodiments, one or more reverse desaccharide residues or one or more imann residues are bound to either or both ends of the sense chain through a thiophosphate bond. In some embodiments, the targeting group is further bound to either end of the sense chain through a thiophosphate bond. In some embodiments, the targeting group is further bound to the 5' end of the sense chain through a thiophosphate bond. In some embodiments, the 5' end of the sense chain includes a reverse desaccharide residue or an imann residue, wherein the reverse desaccharide residue or the imann residue is connected to the adjacent nucleotide at the 5' end of the nucleotide sequence of the sense chain through a thiophosphate bond. In certain embodiments, the sense strand further comprises a targeting group linked to the reverse debasing residue or imann residue at the 5' end of the sense strand, wherein the targeting group is linked to the adjacent reverse debasing residue or imann residue via a phosphorothioate bond, and optionally the targeting group is N-acetylgalactosamine (GalNAc). In some embodiments of the above dsRNA agent, the region complementary to a portion of the PD-L1 mRNA transcript comprises at least 15, 16, 17, 18 or 19 consecutive nucleotides, which differ from the complementary sequence of any of the above target regions of the PD-L1 mRNA transcript by no more than 0, 1, 2 or 3 nucleotides. In certain embodiments, the antisense strand of the dsRNA agent is at least substantially complementary to any of the target regions of SEQ ID NO: 1 and provided in any of Tables 1-3. In some embodiments of the above dsRNA agents, the PD-L1 mRNA transcript is SEQ ID NO: 1.
在一些實施方案中,表1中的任一有義鏈可進一步按照上述式(I)或(III)所示的模式進行修飾。In some embodiments, any sense chain in Table 1 can be further modified according to the pattern shown in formula (I) or (III) above.
在一些實施方案中,表1中的任一反義鏈可進一步按照上述式(II)或(III)所示的模式進行修飾。In some embodiments, any antisense chain in Table 1 can be further modified according to the pattern shown in formula (II) or (III) above.
在一些實施方案中,表1中的任一雙鏈可進一步按照上述式(III)所示的模式進行修飾。In some embodiments, any of the bichains in Table 1 can be further modified according to the pattern shown in the above formula (III).
根據本發明的一個方面,提供了一種組合物,其包括上述本發明 dsRNA劑方面的任何實施方案。在某些實施方案中,該組合物還包括藥學上可接受的載體。在某些實施方案中,該組合物還包括一種或多種額外的治療劑。在某些實施方案中,該組合物包裝在試劑盒、容器、包裝、分配器、預填充注射器或小瓶中。在某些實施方案中,該組合物配製用於皮下給藥或配製用於靜脈內 (IV) 給藥。According to one aspect of the present invention, a composition is provided, which includes any embodiment of the above-mentioned dsRNA agent of the present invention. In certain embodiments, the composition further includes a pharmaceutically acceptable carrier. In certain embodiments, the composition further includes one or more additional therapeutic agents. In certain embodiments, the composition is packaged in a kit, container, package, dispenser, prefilled syringe or vial. In certain embodiments, the composition is formulated for subcutaneous administration or formulated for intravenous (IV) administration.
根據本發明的另一個方面,提供了一種細胞,其包括上述本發明dsRNA劑方面的任何實施方案。在某些實施方案中,所述細胞是哺乳動物細胞,任選地是人類細胞。According to another aspect of the present invention, a cell is provided, which includes any embodiment of the above-mentioned dsRNA agent of the present invention. In some embodiments, the cell is a mammalian cell, optionally a human cell.
根據本發明的另一方面,提供了抑制細胞中PD-L1基因表達的方法,該方法包括:(i)製備包含有效量的本發明上述dsRNA劑方面的任何實施方案或本發明上述組合物的任何實施方案的細胞。在某些實施方案中,該方法還包括:(ii)維持製備的細胞足夠的時間以獲得PD-L1基因的mRNA轉錄物的降解,從而抑制細胞中PD-L1基因的表達。在某些實施方案中,細胞在受試者體內,並且dsRNA劑通過皮下施用於受試者。在某些實施方案中,細胞在受試者體內,並且dsRNA劑通過靜脈內施用施用於受試者。在某些實施方案中,該方法還包括在向受試者施用dsRNA藥劑後評估PD-L1基因的抑制,其中評估方式包括:(i) 確定受試者的PD-L1相關疾病或狀況的一個或多個生理特徵,和 (ii) 將確定的生理特徵與PD-L1相關疾病或狀況的治療前基線生理特徵和/或PD-L1相關疾病或狀況的對照生理特徵進行比較,其中所述比較表明受試者的PD-L1基因表達抑制的存在或不存在中的一個或多個。在某些實施方案中,生理特徵是以下一項或多項: PD-L1 mRNA水平(通過肝活檢)、PD-L1蛋白水平,PD-L1表達的降低還可以通過測量PD-L1生物活性的降低來間接評估、或與PD-L1水平升高相關的其他病理(優選在血液或肝臟中)、或需要抑制PD-L1表達的其他治療方法。可使用本領域技術人員常規的方法(例如northern印跡、qRT-PCR)確定PD-L1 mRNA水平、PD-L1蛋白水平的一項或多項的降低;通過使用本領域技術人員常規的方法(例如Western印跡法、免疫學技術)確定PD-L1的蛋白質水平。還可以通過測量PD-L1生物活性的降低或測量受試者樣品(例如血清樣品)中的PD-L1水平來間接評估PD-L1表達的降低。According to another aspect of the present invention, a method for inhibiting PD-L1 gene expression in a cell is provided, the method comprising: (i) preparing a cell comprising an effective amount of any embodiment of the above-mentioned dsRNA agent of the present invention or any embodiment of the above-mentioned composition of the present invention. In certain embodiments, the method further comprises: (ii) maintaining the prepared cells for a sufficient time to obtain degradation of the mRNA transcript of the PD-L1 gene, thereby inhibiting the expression of the PD-L1 gene in the cell. In certain embodiments, the cell is in a subject, and the dsRNA agent is administered to the subject subcutaneously. In certain embodiments, the cell is in a subject, and the dsRNA agent is administered to the subject by intravenous administration. In certain embodiments, the method further comprises assessing inhibition of the PD-L1 gene after administering the dsRNA agent to the subject, wherein the assessing comprises: (i) determining one or more physiological characteristics of a PD-L1-associated disease or condition in the subject, and (ii) comparing the determined physiological characteristics to a pre-treatment baseline physiological characteristic of the PD-L1-associated disease or condition and/or a control physiological characteristic of the PD-L1-associated disease or condition, wherein the comparison indicates one or more of the presence or absence of inhibition of PD-L1 gene expression in the subject. In certain embodiments, the physiological characteristic is one or more of: PD-L1 mRNA level (by liver biopsy), PD-L1 protein level, the reduction of PD-L1 expression can also be indirectly assessed by measuring the reduction of PD-L1 biological activity, or other pathologies associated with elevated PD-L1 levels (preferably in the blood or liver), or other treatments that require inhibition of PD-L1 expression. The reduction of one or more of PD-L1 mRNA level, PD-L1 protein level can be determined using methods routine to those skilled in the art (e.g., northern blot, qRT-PCR); the protein level of PD-L1 can be determined by using methods routine to those skilled in the art (e.g., Western blot, immunological techniques). The reduction of PD-L1 expression can also be indirectly assessed by measuring the reduction of PD-L1 biological activity or measuring the PD-L1 level in a subject sample (e.g., serum sample).
根據本發明的另一個方面,提供了一種抑制受試者體內PD-L1基因表達的方法,該方法包括向受試者施用有效量的本發明上述dsRNA劑方面的實施方案或本發明上述組合物的實施方案。在某些實施方案中,dsRNA劑通過皮下施用給受試者。在某些實施方案中,dsRNA劑通過靜脈內施用給受試者。在某些實施方案中,該方法還包括:在施用dsRNA藥劑後評估PD-L1基因的抑制,其中評估方法包括:(i)確定受試者中PD-L1相關疾病或病症的一種或多種生理特徵,以及(ii)將確定的生理特徵與PD-L1相關疾病或病症的治療前基線生理特徵和/或PD-L1相關疾病或病症的對照生理特徵進行比較,其中比較表明受試者中PD-L1基因表達的抑制的存在或不存在中的一種或多種。在某些實施方案中,可以通過使用本領域技術人員常規的方法(例如northern印跡、qRT-PCR)測定與PD-L1基因的表達相關的任何變量(例如PD-L1的mRNA水平或PD-L1的蛋白質水平)的水平或水平的變化,來評估PD-L1基因的表達;通過使用本領域技術人員常規的方法(如Western印跡法、免疫學技術)確定PD-L1的蛋白質水平。還可以通過測量PD-L1生物活性的降低或測量受試者樣品(例如血清樣品)中的PD-L1水平來間接評估PD-L1表達的降低。According to another aspect of the present invention, a method for inhibiting PD-L1 gene expression in a subject is provided, the method comprising administering to the subject an effective amount of the dsRNA agent of the present invention or the composition of the present invention. In certain embodiments, the dsRNA agent is administered to the subject subcutaneously. In certain embodiments, the dsRNA agent is administered to the subject intravenously. In certain embodiments, the method further comprises: assessing inhibition of the PD-L1 gene after administration of the dsRNA agent, wherein the assessment method comprises: (i) determining one or more physiological characteristics of a PD-L1-associated disease or disorder in the subject, and (ii) comparing the determined physiological characteristics to a pre-treatment baseline physiological characteristic of the PD-L1-associated disease or disorder and/or a control physiological characteristic of the PD-L1-associated disease or disorder, wherein the comparison indicates one or more of the presence or absence of inhibition of PD-L1 gene expression in the subject. In certain embodiments, the expression of the PD-L1 gene can be assessed by measuring the level or change in the level of any variable associated with the expression of the PD-L1 gene (e.g., PD-L1 mRNA level or PD-L1 protein level) using a conventional method for a person skilled in the art (e.g., northern blot, qRT-PCR); the protein level of PD-L1 can be determined by using a conventional method for a person skilled in the art (e.g., Western blot, immunological technique). The reduction in PD-L1 expression can also be assessed indirectly by measuring the reduction in PD-L1 biological activity or measuring the PD-L1 level in a subject sample (e.g., serum sample).
根據本發明的另一個方面,提供了一種治療與PD-L1蛋白存在相關的疾病或病症的方法,該方法包括:向受試者施用有效量的本發明的任何上述dsRNA劑方面的實施方案或本發明的任何上述組合物的實施方案,以抑制PD-L1基因表達。在某些實施方案中,與PD-L1相關的疾病、病症或病況選自:腫瘤或血液系統惡性腫瘤(例如淋巴瘤/白血病、血液系統惡性腫瘤、乳腺癌、肺癌、結腸癌、卵巢癌、黑色素瘤、膀胱癌、肝癌、唾液腺癌、胃癌、神經膠質瘤、甲狀腺癌、胸腺上皮癌、頭部癌、腎癌、胰腺癌 和頸部癌症)、感染病(例如病毒、細菌、真菌或寄生蟲病)。在某些實施方案中,感染病是慢性感染病,例如由病毒(例如HIV、HBV、HCV和 HTLV等)、細菌(例如幽門螺桿菌等)和寄生蟲(例如曼氏血吸蟲)引起的。According to another aspect of the present invention, a method for treating a disease or condition associated with the presence of PD-L1 protein is provided, the method comprising: administering to a subject an effective amount of any of the above-mentioned dsRNA agent embodiments of the present invention or any of the above-mentioned composition embodiments of the present invention to inhibit PD-L1 gene expression. In certain embodiments, the disease, disorder or condition associated with PD-L1 is selected from: tumors or hematological malignancies (e.g., lymphoma/leukemia, hematological malignancies, breast cancer, lung cancer, colon cancer, ovarian cancer, melanoma, bladder cancer, liver cancer, salivary gland cancer, gastric cancer, neuroglioma, thyroid cancer, thymic epithelial cancer, head cancer, kidney cancer, pancreatic cancer and neck cancer), infectious diseases (e.g., viral, bacterial, fungal or parasitic diseases). In certain embodiments, the infectious disease is a chronic infectious disease, such as caused by viruses (such as HIV, HBV, HCV and HTLV, etc.), bacteria (such as Helicobacter pylori, etc.) and parasites (such as Schistosoma mansoni).
在某些實施方案中,感染病治療的有效性可以通過例如感染因子存在量的減少來證明,例如,通過無法從受試者樣本中培養出病原體來證明感染因子存在量的減少。感染病治療的有效性可以通過感染因子存在量的減少來證明,如感染因子中存在的蛋白質、核酸或碳水化合物的減少來證明。治療的有效性可以通過例如免疫反應的存在來證明,如針對感染因子的抗體或免疫細胞的存在所證明。感染病治療的有效性可以通過感染因子存在的減少來證明,如通過感染的一種或多種症狀或體徵(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來證明。具體的症狀或體徵取決於具體的病原體。在某些實施方案中,通過評估如下所述的血清學標誌物的組合來監測本發明方法在治療HBV感染中的功效。可以通過檢測受試者血清中的乙肝抗原 (HBsAg) HBeAg 或 HB cccDNA 水平來監測HBV受試者的治療效果,以表明該疾病的有效治療。治療效果也可以通過檢測受試者的抗 HBsAg 抗體水平來確定。In certain embodiments, the effectiveness of a treatment for an infectious disease can be demonstrated, for example, by a reduction in the amount of an infectious agent present, such as by the inability to culture the pathogen from a subject's sample. The effectiveness of a treatment for an infectious disease can be demonstrated by a reduction in the amount of an infectious agent present, such as a reduction in the amount of a protein, nucleic acid, or carbohydrate present in the infectious agent. The effectiveness of a treatment can be demonstrated, for example, by the presence of an immune response, such as the presence of antibodies or immune cells directed against the infectious agent. The effectiveness of a treatment for an infectious disease can be demonstrated by a reduction in the presence of an infectious agent, such as by a reduction in one or more symptoms or signs of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss). The specific symptoms or signs depend on the specific pathogen. In certain embodiments, the efficacy of the methods of the present invention in treating HBV infection is monitored by evaluating a combination of serological markers as described below. The treatment effect of HBV subjects can be monitored by detecting the level of hepatitis B antigen (HBsAg) HBeAg or HB cccDNA in the serum of the subject to indicate effective treatment of the disease. The treatment effect can also be determined by detecting the level of anti-HBsAg antibodies in the subject.
在某些實施方案中,本發明方法在癌症治療中的功效可以通過評估受試者的原發性腫瘤或轉移性腫瘤的腫瘤負荷的維持或優選減少或轉移的預防來監測。檢測和監測腫瘤負荷的方法是本領域已知的。治療效果也可以通過檢測具有PD-L1升高或PD-L1反應性腫瘤患者的此類疾病或病症的嚴重程度、體徵、症狀或標誌物的減少來確定。In certain embodiments, the efficacy of the methods of the invention in the treatment of cancer can be monitored by assessing the maintenance or preferably reduction of tumor burden or prevention of metastasis in a subject's primary or metastatic tumor. Methods for detecting and monitoring tumor burden are known in the art. The efficacy of treatment can also be determined by detecting a reduction in the severity, signs, symptoms or markers of such diseases or conditions in patients with elevated PD-L1 or PD-L1 responsive tumors.
在某些實施方案中,還可以通過測量或觀察PD-L1相關疾病的至少一種體徵或症狀的變化(優選臨床相關變化)來間接評估PD-L1表達的降低。可以例如通過測量疾病進展、疾病緩解、症狀嚴重程度、疼痛減輕、生活質量、維持治療效果所需的藥物劑量、疾病標誌物的水平或任何其他適合於所治療或預防的特定疾病的可測量參數來評估疾病的治療或預防的功效。本領域技術人員完全能夠通過測量這些參數中的任何一個或任何參數組合來監測治療或預防的功效。例如,通過增強免疫反應可以提高疾病(例如感染病,例如病毒性疾病,例如肝炎或癌症)的治療效果。臨床上適當的方式對至少統計學上顯著的一部分患者產生有益效果,例如症狀改善、治癒、疾病減輕、壽命延長、生活質量提高,或通常被熟悉治療PD-L1相關疾病的醫生認為是積極的其他效果,例如本文提供的HBV診斷標準中所提供的。In certain embodiments, the reduction of PD-L1 expression can also be indirectly assessed by measuring or observing a change (preferably a clinically relevant change) in at least one sign or symptom of a PD-L1-related disease. The efficacy of the treatment or prevention of a disease can be assessed, for example, by measuring disease progression, disease remission, symptom severity, pain relief, quality of life, the amount of medication required to maintain the therapeutic effect, the level of a disease marker, or any other measurable parameter suitable for the specific disease being treated or prevented. Those skilled in the art are fully capable of monitoring the efficacy of treatment or prevention by measuring any one or any combination of these parameters. For example, the therapeutic effect of a disease (e.g., an infectious disease, such as a viral disease, such as hepatitis or cancer) can be improved by enhancing the immune response. A clinically appropriate approach produces a beneficial effect on at least a statistically significant portion of patients, such as symptom improvement, cure, disease reduction, prolonged life, improved quality of life, or other effects that are generally considered positive by physicians familiar with treating PD-L1-related diseases, such as provided in the HBV diagnostic criteria provided herein.
在某些實施方案中,該方法還包括:向受試者施用另外的治療方案。在某些實施方案中,另外的治療方案包括治療PD-L1相關疾病或病症。在某些實施方案中,另外的治療方案包括:向受試者施用本發明的一種或多種PD-L1反義多核苷酸,向受試者施用非PD-L1 dsRNA治療劑,以及對受試者進行行為改變。在一些實施方案中,另外的癌症治療劑選自手術、放射療法、化學療法、靶向療法、免疫療法或激素療法組成的組。在某些實施方案中,化療化合物包括但不限於阿侖單抗(alemtuzumab)、六甲蜜胺(altretamine)、阿紮胞苷(azacitidine)、苯達莫司汀(bendamustine)、博來黴素(bleomycin)、硼替佐米(bortezomib)、白消安(busulfan)、卡巴他賽(cabazitaxel)、卡培他濱(capecitabine)、卡鉑(carboplatin)、卡莫呋(carmofur)、卡莫司汀(carmustine)、苯丁酸氮芥(chlorambucil)、氯甲嗪(chlormethine)、順鉑(cisplatin)、克拉屈濱(cladribine)、氯法拉濱(clofarabine)、環磷醯胺(cyclophosphamide)、阿糖胞苷(cytarabine)、達卡巴嗪(dacarbazine)、放線菌素(dactinomycin)、柔紅黴素(daunorubicin)、地西他濱(decitabine)、地諾單抗(denosumab)、多西他賽(docetaxel)、多柔比星(doxorubicin)、表柔比星(epirubicin)、雌莫司汀(estramustine)、依託泊苷(etoposide)、依維莫司(everolimus)、氟尿苷(floxuridine)、氟達拉濱(fludarabine)、氟尿嘧啶(fluorouracil)、福莫司汀(fotemustine)、吉西他濱(gemcitabine)、吉妥珠單抗(gemtuzumab)、羥基脲(hydroxycarbamide)、伊布替莫單抗(ibritumomab)、伊達比星(idarubicin)、異環磷醯胺(ifosfamide)、伊立替康(irinotecan)、伊沙匹隆(ixabepilone)、洛莫司汀(lomustine)、美法侖(melphalan)、巰嘌呤(mercaptopurine)、甲氨蝶呤(methotrexate)、絲裂黴素(mitomycin)、米托蒽醌(mitoxantrone)、奈達鉑(nedaplatin)、奈拉濱(nelarabine)、奧法木單抗(ofatumumab)、奧沙利鉑(oxaliplatin)、紫杉醇(paclitaxel)、培美曲塞(pemetrexed)、戊司他丁(pentostatin)、帕妥珠單抗(pertuzumab)、丙卡巴肼(procarbazine)、雷替曲塞(raltitrexed)、鏈脲佐菌素(streptozotocin)、替加氟(tegafur)、替莫唑胺(temozolomide)、替西羅莫司(temsirolimus)、替尼泊苷(teniposide)、硫鳥嘌呤(tioguanine)、拓撲替康(topotecan)、托西莫單抗(tositumomab)、戊柔比星(valrubicin)、長春花鹼(vinblastine)、長春新鹼(vincristine)、長春地辛(vindesine)、長春氟寧(vinflunine)、或長春瑞濱(vinorelbine),或其任意組合。 在某些實施方案中,靶向治療包括但不限於蛋白激酶抑制劑、檢查點抑制劑、VEGF抑制劑。蛋白激酶抑制劑是小分子、化合物、多糖、脂質、肽、多肽、蛋白質、抗體、核苷、核苷類似物、核苷酸、核苷酸類似物、核酸或寡核苷酸。在某些實施方案中,蛋白激酶抑制劑包括但不限於阿卡替尼(acalabrutinib)、阿達色替(adavosertib)、阿法替尼(afatinib)、阿來替尼(alectinib)、阿西替尼(axitinib)、比尼替尼(binimetinib)、博舒替尼(bosutinib)、布格替尼(brigatinib)、西地尼布(cediranib)、色瑞替尼(ceritinib)、西妥昔單抗(cetuximab)、考比替尼(cobimetinib)、克唑替尼(crizotinib)、卡博替尼(cabozantinib)、達克替尼(dacomitinib)、達沙替尼(dasatinib)、恩曲替尼(entrectinib)、厄達替尼(erdafitinib)、厄洛替尼(erlotinib)、福他替尼(fostamatinib)、吉非替尼(gefitinib)、依布替尼(ibrutinib)、伊馬替尼(imatinib)、拉帕替尼(lapatinib)、侖伐替尼(lenvatinib)、來他替尼(lestaurtinib)、洛他替尼(lortatinib)、馬賽替尼(masitinib)、莫米洛替尼(momelotinib)、莫布替尼(mubritinib)、來那替尼(neratinib)、尼羅替尼(nilotinib)、尼達尼布(nintedanib)、奧莫替尼(olmutinib)、奧希替尼(osimertinib)、帕克替尼(pacritinib)、帕尼單抗(panitumumab)、帕唑帕尼(pazopanib)、呱加替尼(pegaptanib)、普納替尼(ponatinib),拉多替尼(radotinib)、瑞戈非尼(regorafenib)、羅西替尼(rociletinib)、蘆可替尼(ruxolitinib)、司美替尼(selumetinib)、司馬沙尼(semaxanib)、索拉非尼(sorafenib)、舒尼替尼(sunitinib)、SU6656、替沃紮尼(tivozanib)、托塞尼布(toceranib)、曲美替尼(trametinib)、曲妥珠單抗(trastuzumab)、凡德他尼(vandetanib)或維莫非尼(vemurafenib)或其任意組合。在某些實施方案中,檢查點抑制劑是小分子、化合物、多糖、脂質、肽、多肽、蛋白質、抗體、核苷、核苷類似物、核苷酸、核苷酸類似物、核酸或寡核苷酸。在某些實施方案中,免疫檢查點是PD-1/PD-L1檢查點。在某些實施方案中,PD-1檢查點包括但不限於納武單抗(nivolumab)、帕博利珠單抗(pembrolizumab)、斯巴達珠單抗(spartalizumab)、西米普利單抗(cemiplimab)、卡瑞利珠單抗(camrelizumab)、信迪利單抗(sintilimab)、替雷利珠單抗(tislelizumab)、特瑞普利單抗(toripalimab)、AMP-224或AMP-514,或其任意組合。在某些實施方案中,PD-L1檢查點抑制劑包括但不限於阿替利珠單抗(atezolizumab)、阿維單抗(avelumab)、度伐單抗(durvalumab)、KN035、AUNP12、CA-170或BMS-986189,或其任意組合。在某些實施方案中,免疫檢查點是CTLA-4檢查點。在某些實施方案中,CTLA-4檢查點抑制劑包括但不限於伊匹單抗(ipilimumab)或曲米單抗(tremilimumab),或其任何組合。在某些實施方案中,VEGF抑制劑是小分子、化合物、多糖、脂質、肽、多肽、蛋白質、抗體、核苷、核苷類似物、核苷酸、核苷酸類似物、核酸或寡核苷酸。在某些實施方案中,VEGF抑制劑包括但不限於阿柏西普(aflibercept)、阿昔替尼(axitinib)、貝伐單抗(bevacizumab)、布立尼布(brivanib)、卡博替尼(cabozantinib)、西地尼布(cediranib)、侖伐替尼(lenvatinib)、利尼夫米布(linifmib)、尼達尼布(nintedanib)、帕唑帕尼(pazopanib)、普納替尼(ponatinib)、雷莫蘆單抗(ramucirumab)、瑞戈非尼(regorafenib)、司馬沙尼(semaxanib)、索拉非尼(sorafenib)、舒尼替尼(sunitinib)、替沃紮尼(tivozanib)、托塞尼布(toceranib)或凡德他尼(vandetanib),或其任何組合。在某些實施方案中,選自由抗病毒藥物組成的額外的治療劑是指施用以治療病毒感染的藥物組合物。在某些實施方案中,病毒感染是由腺病毒(adenovirus)、埃博拉病毒(Ebola virus)、冠狀病毒(coronavirus)、愛潑斯坦-巴爾病毒 (EBV)、弗倫德病毒(Friend virus)、漢坦病毒(hantavirus)、乙肝病毒 (HBV)、丙肝病毒 (HCV)、單純皰疹病毒(herpes simplex virus)、人類免疫缺陷病毒 (HIV)、人類偏肺病毒(human metapneumovirus)、人乳頭瘤病毒 (HPV)、流感病毒(influenza virus)、日本腦炎病毒(Japanese encephalitis virus)、卡波西肉瘤相關皰疹病毒(Kaposi’s sarcoma-associated herpesvirus)、淋巴細胞脈絡叢腦膜炎病毒(lymphocytic choriomeningitis virus)、副流感病毒(parainfluenza virus)、狂犬病毒(rabies virus)、呼吸道合胞病毒(respiratory syncytial virus)、鼻病毒(rhinovirus)、水痘帶狀皰疹病毒(varicella zoster virus)引起的。在某些實施方案中,抗病毒藥物是小分子、化合物、多糖、脂質、肽、多肽、蛋白質、抗體、核苷、核苷類似物、核苷酸、核苷酸類似物、核酸或寡核苷酸。在某些實施方案中,抗病毒藥物是干擾素、衣殼組裝調節劑、序列特異性寡核苷酸、進入抑制劑或小分子免疫調節劑。在某些實施方案中,抗病毒藥物包括但不限於 AB-423、AB-506、ABI-H2158、ABI-H0731、阿昔洛韋(acyclovir)、阿達普明(adapromine)、阿德福韋(adefovir)、艾拉芬胺(alafenamide)、金剛烷胺(amantadine)、阿舒那普韋(asunaprevir)、巴洛沙韋酯(baloxavir marboxil)、貝克拉布韋(beclabuvir)、波賽普韋(boceprevir)、溴比夫定(brivudine)、西多福韋(cidofovir)、西盧普韋(ciluprevir)、克拉夫定(clevudine)、阿糖胞苷(cytarabine)、達卡他韋(daclatasvir)、達諾普韋(danoprevir)、達塞布韋(dasabuvir)、德萊布韋(deleobuvir)、阿德福韋酯(dipivoxil)、依度尿苷(edoxudine)、艾爾巴韋(elbasvir)、恩替卡韋(entecavir)、法達瑞韋(faldaprevir)、泛昔洛韋(famciclovir)、法匹拉韋(favipiravir)、非利布韋(filibuvir)、福米韋生(fomivirsen)、膦甲酸(foscamet)、加利司韋(galidesivir)、更昔洛韋(ganciclovir)、格卡瑞韋(glecaprevir)、GLS4、格拉瑞韋(grazoprevir)、碘苷(idoxuridine)、咪喹莫特(imiquimod)、IFN-a、干擾素alfa 2b、JNJ-440、JNJ-6379、拉米夫定(lamivudine)、拉尼米韋(laninamivir)、雷迪帕韋(ledipasvir)、美西他濱(mericitabine)、美替沙腙(methisazone)、MK-608、嗎啉胍(moroxydine)、那拉匹韋(narlaprevir)、NITD008、NZ-4、奧達拉韋(odalasvir)、奧比他韋(ombitasvir)、奧司他韋(oseltamivir)、帕瑞他韋(paritaprevir)、聚乙二醇干擾素α-2a、噴昔洛韋(penciclovir)、帕拉米韋(peramivir)、呱侖他韋(pibrentasvir)、吡莫地韋(pimodivir)、普可那利(pleconaril)、鬼臼毒素(podophyllotoxin)、普沙托韋(presatovir)、瑞達布韋(radalbuvir)、拉維達韋(ravidasvir)、瑞德西韋(remdesivir)、REP 2139、REP 2165、雷西莫特(resiquimod)、RG7907、利巴韋林(ribavirin)、利福平(rifampicin)、金剛乙胺(rimantadine)、盧紮司韋(ruzasvir)、沙他司韋(samatasvir)、塞曲布韋(setrobuvir)、司美匹韋(simeprevir)、索非布韋(sofosbuvir)、索立夫定(sorivudine)、索伐瑞韋(sovaprevir)、塔利韋林(taribavirin)、特拉瑞韋(telaprevir)、替比夫定(telbivudine)、替諾福韋(tenofovir)、替諾福韋酯(tenofovir disoproxil)、三氮唑核苷(triazavirin)、三氟尿苷(trifl uridine)、曲金剛胺(tromantadine)、阿比多爾(umifenovir)、烏磷布韋(uprifosbuvir)、伐昔洛韋(valaciclovir)、纈更昔洛韋(valgancicovir)、伐尼瑞韋(vaniprevir)、維德瑞韋(vedroprevir)、維帕他韋(velpatasvir)、阿糖腺苷(vidarabine)、伏西瑞韋(voxilaprevir)或紮那米韋(zanamivir)或其任意組合。In some embodiments, the method further comprises: administering an additional treatment regimen to the subject. In some embodiments, the additional treatment regimen comprises treating a PD-L1-related disease or condition. In some embodiments, the additional treatment regimen comprises: administering one or more PD-L1 antisense polynucleotides of the present invention to the subject, administering a non-PD-L1 dsRNA therapeutic to the subject, and performing behavioral changes on the subject. In some embodiments, the additional cancer therapeutic agent is selected from the group consisting of surgery, radiation therapy, chemotherapy, targeted therapy, immunotherapy, or hormone therapy. In certain embodiments, the chemotherapeutic compound includes, but is not limited to, alemtuzumab, altretamine, azacitidine, bendamustine, bleomycin, bortezomib, busulfan, cabazitaxel, capecitabine, carboplatin, carmofur, carmustine, chlorambucil, chlormethine, cisplatin, cladribine, clofarabine, cyclophosphamide, osphamide, cytarabine, dacarbazine, dactinomycin, daunorubicin, decitabine, denosumab, docetaxel, doxorubicin, epirubicin, estramustine, etoposide, everolimus, floxuridine, fludarabine, fluorouracil, fotemustine, gemcitabine, gemtuzumab b), hydroxycarbamide, ibritumomab, idarubicin, ifosfamide, irinotecan, ixabepilone, lomustine, melphalan, mercaptopurine, methotrexate, mitomycin, mitoxantrone, nedaplatin, nelarabine, ofatumumab, oxaliplatin, paclitaxel, pemetrexed, pentathiaprine In some embodiments, the targeted therapy includes but is not limited to protein kinase inhibitors, checkpoint inhibitors, and VEGF inhibitors. The protein kinase inhibitor is a small molecule, a compound, a polysaccharide, a lipid, a peptide, a polypeptide, a protein, an antibody, a nucleoside, a nucleoside analog, a nucleotide, a nucleotide analog, a nucleic acid or an oligonucleotide. In certain embodiments, the protein kinase inhibitor includes but is not limited to acalabrutinib, adavosertib, afatinib, alectinib, axitinib, binimetinib, bosutinib, brigatinib, cediranib, ceritinib, cetuximab, cobimetinib, crizotinib, b), cabozantinib, dacomitinib, dasatinib, entrectinib, erdafitinib, erlotinib, fostamatinib, gefitinib, ibrutinib, imatinib, lapatinib, lenvatinib, lestaurtinib, lortati nib), masitinib, momelotinib, mubritinib, neratinib, nilotinib, nintedanib, olmutinib, osimertinib, pacritinib, panitumumab, pazopanib, pegaptanib, ponatinib, radotinib ), regorafenib, rociletinib, ruxolitinib, selumetinib, semaxanib, sorafenib, sunitinib, SU6656, tivozanib, toceranib, trametinib, trastuzumab, vandetanib or vemurafenib or any combination thereof. In certain embodiments, the checkpoint inhibitor is a small molecule, a compound, a polysaccharide, a lipid, a peptide, a polypeptide, a protein, an antibody, a nucleoside, a nucleoside analog, a nucleotide, a nucleotide analog, a nucleic acid or an oligonucleotide. In certain embodiments, the immune checkpoint is a PD-1/PD-L1 checkpoint. In certain embodiments, the PD-1 checkpoint includes but is not limited to nivolumab, pembrolizumab, spartalizumab, cemiplimab, camrelizumab, sintilimab, tislelizumab, toripalimab, AMP-224 or AMP-514, or any combination thereof. In certain embodiments, the PD-L1 checkpoint inhibitor includes but is not limited to atezolizumab, avelumab, durvalumab, KN035, AUNP12, CA-170 or BMS-986189, or any combination thereof. In certain embodiments, the immune checkpoint is the CTLA-4 checkpoint. In some embodiments, the CTLA-4 checkpoint inhibitor includes but is not limited to ipilimumab or tremilimumab, or any combination thereof. In some embodiments, the VEGF inhibitor is a small molecule, a compound, a polysaccharide, a lipid, a peptide, a polypeptide, a protein, an antibody, a nucleoside, a nucleoside analog, a nucleotide, a nucleotide analog, a nucleic acid, or an oligonucleotide. In certain embodiments, VEGF inhibitors include, but are not limited to, aflibercept, axitinib, bevacizumab, brivanib, cabozantinib, cediranib, lenvatinib, linifmib, nintedanib, pazopanib, ponatinib, ramucirumab, regorafenib, semaxanib, sorafenib, sunitinib, tivozanib, toceranib, or vandetanib, or any combination thereof. In certain embodiments, the additional therapeutic agent selected from the group consisting of antiviral drugs refers to a drug composition administered to treat a viral infection. In certain embodiments, the viral infection is caused by adenovirus, Ebola virus, coronavirus, EBV, Friend virus, hantavirus, HBV, HCV, herpes simplex virus, HIV, human metapneumovirus, HPV, influenza virus, Japanese encephalitis virus, Kaposi's sarcoma-associated herpesvirus, lymphocytic choriomeningitis virus, parainfluenza virus, rabies virus, respiratory syncytial virus, In some embodiments, the antiviral drug is a small molecule, a compound, a polysaccharide, a lipid, a peptide, a polypeptide, a protein, an antibody, a nucleoside, a nucleoside analog, a nucleotide, a nucleotide analog, a nucleic acid or an oligonucleotide. In some embodiments, the antiviral drug is an interferon, a capsid assembly modulator, a sequence-specific oligonucleotide, an entry inhibitor or a small molecule immunomodulator. In certain embodiments, antiviral drugs include, but are not limited to, AB-423, AB-506, ABI-H2158, ABI-H0731, acyclovir, adapromine, adefovir, alafenamide, amantadine, asunaprevir, baloxavir marboxil), beclabuvir, boceprevir, brivudine, cidofovir, ciluprevir, clevudine, cytarabine, daclatasvir, danoprevir, dasabuvir, deleobuvir, dipivoxil, edoxudine, elbasvir ), entecavir, faldaprevir, famciclovir, favipiravir, filibuvir, fomivirsen, foscamet, galidesivir, ganciclovir, glecaprevir, GLS4, grazoprevir, idoxuridine, imiquimod, IFN-a, interferon alfa 2b, JNJ-440, JNJ-6379, lamivudine, laninamivir, ledipasvir, mericitabine, methisazone, MK-608, moroxydine, narlaprevir, NITD008, NZ-4, odalasvir, ombitasvir, oseltamivir ), paritaprevir, peginterferon alpha-2a, penciclovir, peramivir, pibrentasvir, pimodivir, pleconaril, podophyllotoxin, presatovir, radalbuvir, ravidasvir, remdesivir, REP 2139, REP 2165, resiquimod, RG7907, ribavirin, rifampicin, rimantadine, ruzasvir, samatasvir, setrobuvir, simeprevir, sofosbuvir, sorivudine, sovaprevir, taribavirin, telaprevir, telbivudine, tenofovir, tenofovir disoproxil, triazavirin, trifluridine uridine, tromantadine, umifenovir, uprifosbuvir, valacilovir, valgancicovir, vaniprevir, vedroprevir, velpatasvir, vidarabine, voxilaprevir, or zanamivir, or any combination thereof.
在某些實施方案中,dsRNA藥劑通過皮下方式施用於受試者。在某些實施方案中,dsRNA藥劑通過靜脈注射施用於受試者。在某些實施方案中,該方法還包括確定所施予的雙鏈核糖核酸 (dsRNA) 藥劑對受試者的功效。In some embodiments, the dsRNA agent is administered to the subject subcutaneously. In some embodiments, the dsRNA agent is administered to the subject by intravenous injection. In some embodiments, the method further comprises determining the efficacy of the administered double-stranded RNA (dsRNA) agent on the subject.
在某些實施方案中,確定受試者的治療效果的方法包括:(i)確定受試者的PD-L1相關疾病或病症的一個或多個生理特徵,以及(ii)將確定的生理特徵與PD-L1相關疾病或病症的基線治療前生理特徵進行比較,其中比較表明向受試者施用雙鏈核糖核酸 (dsRNA)藥劑的功效的存在、不存在和水平中的一個或多個。In certain embodiments, a method of determining a treatment effect in a subject comprises: (i) determining one or more physiological characteristics of a PD-L1-associated disease or disorder in the subject, and (ii) comparing the determined physiological characteristics to a baseline, pre-treatment physiological characteristic of the PD-L1-associated disease or disorder, wherein the comparison indicates one or more of the presence, absence, and level of efficacy of administering a double-stranded RNA (dsRNA) agent to the subject.
在某些實施方案中,可基於受試者中與PD-L1基因表達相關的任何變量的水平或水平變化(例如PD-L1 mRNA水平、PD-L1蛋白水平)來評估PD-L1基因的表達。 PD-L1表達的減少通過以下方面來間接評估:通過測量受試者樣品(例如,血清樣品)中的PD-L1生物活性的降低或PD-L1水平來評估,通過測量傳染原中存在的蛋白質、核酸或碳水化合物的減少來評估,通過評估針對傳染源的抗體或免疫細胞來免疫反應來評估,通過一種或多種感染體徵或症狀(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來評估,通過測量受試者血清中的乙肝抗原(HBsAg)、HBeAg或HB cccDNA的水平來評估,通過檢測受試者的抗HBsAg抗體水平來評估。In certain embodiments, the expression of the PD-L1 gene can be assessed based on the level or level change of any variable associated with the expression of the PD-L1 gene in the subject (e.g., PD-L1 mRNA level, PD-L1 protein level). Reduction in PD-L1 expression is assessed indirectly by measuring a decrease in PD-L1 biological activity or PD-L1 levels in a sample from a subject (e.g., a serum sample), by measuring a decrease in proteins, nucleic acids, or carbohydrates present in an infectious agent, by assessing an immune response against antibodies or immune cells directed against an infectious agent, by a decrease in one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by measuring the level of hepatitis B antigen (HBsAg), HBeAg, or HB cccDNA in the subject's serum, or by detecting the subject's anti-HBsAg antibody level.
根據本發明的另一方面,提供了一種與受試者體內PD-L1蛋白的治療前基線水平相比降低受試者體內PD-L1蛋白水平的方法,所述方法包括向受試者施用有效量的本發明的任何上述dsRNA藥劑的實施方案或本發明的任何上述組合物的實施方案,以降低PD-L1基因表達水平。在某些實施方案中,dsRNA藥劑通過皮下施用給受試者或通過靜脈注射施用給受試者。According to another aspect of the present invention, a method for reducing the level of PD-L1 protein in a subject compared to the pre-treatment baseline level of PD-L1 protein in the subject is provided, the method comprising administering to the subject an effective amount of any of the above-mentioned dsRNA agent embodiments of the present invention or any of the above-mentioned composition embodiments of the present invention to reduce the expression level of the PD-L1 gene. In certain embodiments, the dsRNA agent is administered to the subject subcutaneously or by intravenous injection.
根據本發明的另一個方面,提供了一種與受試者的PD-L1相關疾病或病症的治療前基線生理特徵相比,改變受試者的PD-L1相關疾病或病症的生理特徵的方法,該方法包括向受試者施用有效量的本發明的任何上述dsRNA藥劑的實施方案或本發明的任何上述組合物的實施方案,以改變受試者的PD-L1相關疾病或病症的生理特徵。在某些實施方案中,dsRNA藥劑皮下施用給受試者或通過靜脈注射施用給受試者。在某些實施方案中,生理特徵和症狀是以下中的一個或多個:受試者的PD-L1 mRNA水平、 PD-L1蛋白水平,PD-L1表達的減少通過以下方面來間接評估:通過測量受試者樣品(例如,血清樣品)中的PD-L1生物活性的降低或PD-L1水平來評估,通過測量傳染原中存在的蛋白質、核酸或碳水化合物的減少來評估,通過評估針對傳染源的抗體或免疫細胞來免疫反應來評估,通過一種或多種感染體徵或症狀(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來評估,通過測量受試者血清中的乙肝抗原(HBsAg)、HBeAg或HB cccDNA的水平來評估,通過檢測受試者的抗HBsAg抗體水平來評估。According to another aspect of the present invention, a method of changing the physiological characteristics of a PD-L1-related disease or condition in a subject compared to the physiological characteristics of the PD-L1-related disease or condition before treatment of the subject is provided, the method comprising administering to the subject an effective amount of any of the above-mentioned dsRNA agent embodiments of the present invention or any of the above-mentioned composition embodiments of the present invention to change the physiological characteristics of the PD-L1-related disease or condition in the subject. In certain embodiments, the dsRNA agent is administered to the subject subcutaneously or by intravenous injection. In certain embodiments, the physiological characteristics and symptoms are one or more of the following: PD-L1 mRNA level, PD-L1 protein level in the subject, a decrease in PD-L1 expression is assessed indirectly by measuring a decrease in PD-L1 biological activity or PD-L1 level in a sample (e.g., a serum sample) from the subject, by measuring a decrease in protein, nucleic acid, or carbohydrate present in an infectious agent, by assessing an immune response to an infectious agent by assessing antibodies or immune cells, by assessing a decrease in one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by measuring hepatitis B antigen (HBsAg), HBeAg, or HB in the subject's serum. The level of cccDNA is assessed by testing the level of anti-HBsAg antibodies in the subjects.
根據本發明的另一個方面,提供了上述dsRNA劑用於治療與PD-L1蛋白存在相關的疾病或病症的方法。在某些實施方案中,所述疾病或病症是以下一種或多種:腫瘤或血液系統惡性腫瘤(例如淋巴瘤/白血病、血液系統惡性腫瘤、乳腺癌、肺癌、結腸癌、卵巢癌、黑色素瘤、膀胱癌、肝癌、唾液腺癌、胃癌、神經膠質瘤、甲狀腺癌、胸腺上皮癌、頭部癌、腎癌、胰腺癌 和頸部癌症)、感染病(例如病毒、細菌、真菌或寄生蟲病)。在某些實施方案中,感染病是慢性感染病,例如由病毒(例如HIV、HBV、HCV和HTLV等)、細菌(例如幽門螺桿菌等)和寄生蟲(例如曼氏血吸蟲)引起的。According to another aspect of the present invention, a method for treating a disease or condition associated with the PD-L1 protein using the above-mentioned dsRNA agent is provided. In certain embodiments, the disease or condition is one or more of the following: tumors or hematological malignancies (e.g., lymphoma/leukemia, hematological malignancies, breast cancer, lung cancer, colon cancer, ovarian cancer, melanoma, bladder cancer, liver cancer, salivary gland cancer, gastric cancer, neuroglioma, thyroid cancer, thymic epithelial cancer, head cancer, kidney cancer, pancreatic cancer and neck cancer), infectious diseases (e.g., viral, bacterial, fungal or parasitic diseases). In certain embodiments, the infectious disease is a chronic infectious disease, such as caused by viruses (such as HIV, HBV, HCV and HTLV, etc.), bacteria (such as Helicobacter pylori, etc.) and parasites (such as Schistosoma mansoni).
根據本發明的另一個方面,提供了一種用於抑制PD-L1蛋白表達的反義多核苷酸藥劑,所述藥劑包括10至30個連續的核苷酸,其中至少一個連續的核苷酸是修飾的核苷酸,並且其中所述藥劑的核苷酸序列在其整個長度上與SEQ ID NO: 1的核苷酸序列的等效區域約80%互補。在某些實施方案中,等效區域是SEQ ID NO: 1的靶區域中的任何一個,互補序列是表1-3之一中提供的序列。在某些實施方案中,反義多核苷酸藥劑包括表1-3之一中提供的反義序列之一。According to another aspect of the present invention, an antisense polynucleotide agent for inhibiting PD-L1 protein expression is provided, the agent comprising 10 to 30 consecutive nucleotides, wherein at least one consecutive nucleotide is a modified nucleotide, and wherein the nucleotide sequence of the agent is about 80% complementary to the equivalent region of the nucleotide sequence of SEQ ID NO: 1 over its entire length. In certain embodiments, the equivalent region is any one of the target regions of SEQ ID NO: 1, and the complementary sequence is a sequence provided in one of Tables 1-3. In certain embodiments, the antisense polynucleotide agent comprises one of the antisense sequences provided in one of Tables 1-3.
根據本發明的另一個方面,提供了一種包括上述任何反義多核苷酸劑的實施方案的組合物。在某些實施方案中,該組合物還包括藥學上可接受的載體。在某些實施方案中,該組合物還包括一種或多種用於治療PD-L1相關疾病或病症的額外治療劑。在某些實施方案中,該組合物包裝在試劑盒、容器、包裝、分配器、預填充注射器或小瓶中。在某些實施方案中,該組合物配製用於皮下或靜脈內給藥。According to another aspect of the present invention, a composition comprising any of the embodiments of the antisense polynucleotide agents described above is provided. In certain embodiments, the composition further comprises a pharmaceutically acceptable carrier. In certain embodiments, the composition further comprises one or more additional therapeutic agents for treating PD-L1-related diseases or conditions. In certain embodiments, the composition is packaged in a kit, container, package, dispenser, prefilled syringe or vial. In certain embodiments, the composition is formulated for subcutaneous or intravenous administration.
根據本發明的另一個方面,提供了一種包括上述任一反義多核苷酸劑的實施方案的細胞。在某些實施方案中,所述細胞是哺乳動物細胞,任選地是人類細胞。According to another aspect of the present invention, a cell comprising any one of the embodiments of the antisense polynucleotide agent described above is provided. In certain embodiments, the cell is a mammalian cell, optionally a human cell.
根據本發明的另一個方面,提供了一種抑制細胞中PD-L1基因表達的方法,該方法包括:(i)製備包含有效量的上述任一反義多核苷酸劑的細胞。在某些實施方案中,該方法還包括(ii)將(i)中製備的細胞維持足夠的時間以獲得PD-L1基因的mRNA轉錄物的降解,從而抑制細胞中PD-L1基因的表達。According to another aspect of the present invention, a method for inhibiting the expression of PD-L1 gene in cells is provided, the method comprising: (i) preparing cells containing an effective amount of any of the above antisense polynucleotide agents. In certain embodiments, the method further comprises (ii) maintaining the cells prepared in (i) for a sufficient time to obtain degradation of the mRNA transcript of the PD-L1 gene, thereby inhibiting the expression of the PD-L1 gene in the cells.
根據本發明的另一個方面,提供了抑制受試者中PD-L1基因表達的方法,該方法包括向受試者施用有效量的上述任何反義多核苷酸藥劑的實施方案。According to another aspect of the present invention, a method for inhibiting PD-L1 gene expression in a subject is provided, the method comprising administering to the subject an effective amount of any of the above-mentioned antisense polynucleotide agent embodiments.
根據本發明的另一個方面,提供了治療與PD-L1蛋白存在相關的疾病或病症的方法,所述方法包括向受試者施用有效量的上述任何一種反義多核苷酸藥劑的實施方案或上述任何一種本發明組合物的實施方案,以抑制PD-L1基因表達。在某些實施方案中,所述疾病或病症是以下一種或多種:腫瘤或血液系統惡性腫瘤(例如淋巴瘤/白血病、血液系統惡性腫瘤、乳腺癌、肺癌、結腸癌、卵巢癌、黑色素瘤、膀胱癌、肝癌、唾液腺癌、胃癌、神經膠質瘤、甲狀腺癌、胸腺上皮癌、頭部癌、腎癌、胰腺癌 和頸部癌症)、感染病(例如病毒、細菌、真菌或寄生蟲病)。在某些實施方案中,感染病是慢性感染病,例如由病毒(例如HIV、HBV、HCV和HTLV等)、細菌(例如幽門螺桿菌等)和寄生蟲(例如曼氏血吸蟲)引起的。According to another aspect of the present invention, a method for treating a disease or condition associated with the presence of PD-L1 protein is provided, the method comprising administering to a subject an effective amount of any one of the above-mentioned antisense polynucleotide agent embodiments or any one of the above-mentioned compositions of the present invention embodiments to inhibit PD-L1 gene expression. In certain embodiments, the disease or condition is one or more of the following: tumors or hematological malignancies (e.g., lymphoma/leukemia, hematological malignancies, breast cancer, lung cancer, colon cancer, ovarian cancer, melanoma, bladder cancer, liver cancer, salivary gland cancer, gastric cancer, neuroglioma, thyroid cancer, thymic epithelial cancer, head cancer, kidney cancer, pancreatic cancer and neck cancer), infectious diseases (e.g., viral, bacterial, fungal or parasitic diseases). In certain embodiments, the infectious disease is a chronic infectious disease, such as caused by viruses (such as HIV, HBV, HCV and HTLV, etc.), bacteria (such as Helicobacter pylori, etc.) and parasites (such as Schistosoma mansoni).
根據本發明的另一個方面,提供了與受試者體內PD-L1蛋白的治療前基線水平相比降低受試者體內PD-L1蛋白水平的方法,該方法包括向受試者施用有效量的上述任何反義多核苷酸藥劑的實施方案或上述任何本發明組合物的實施方案,以降低PD-L1基因表達水平。在某些實施方案中,反義多核苷酸藥劑通過皮下或靜脈內給藥施用於受試者。According to another aspect of the present invention, a method for reducing the level of PD-L1 protein in a subject compared to the pre-treatment baseline level of PD-L1 protein in the subject is provided, the method comprising administering to the subject an effective amount of any of the above-mentioned antisense polynucleotide agent embodiments or any of the above-mentioned compositions of the present invention embodiments to reduce the PD-L1 gene expression level. In certain embodiments, the antisense polynucleotide agent is administered to the subject subcutaneously or intravenously.
根據本發明的另一個方面,提供了一種用於抑制PD-L1基因表達的反義多核苷酸藥劑,所述藥劑包括10至30個連續的核苷酸,其中至少一個連續的核苷酸是修飾的核苷酸,並且其中所述藥劑的核苷酸序列在其整個長度上與SEQ ID NO:1的核苷酸序列的等同區域約80%或約85%互補。According to another aspect of the present invention, an antisense polynucleotide agent for inhibiting PD-L1 gene expression is provided, wherein the agent comprises 10 to 30 consecutive nucleotides, wherein at least one consecutive nucleotide is a modified nucleotide, and wherein the nucleotide sequence of the agent is complementary to the equivalent region of the nucleotide sequence of SEQ ID NO: 1 by about 80% or about 85% over its entire length.
根據本發明的另一個方面,提供了與受試者的PD-L1相關疾病或病症的治療前基線生理特徵相比改變受試者的PD-L1相關疾病或病症的生理特徵的方法,該方法包括向受試者施用有效量的上述任何反義多核苷酸劑的實施方案或上述任何本發明組合物的實施方案,以改變受試者的PD-L1疾病或病症的生理特徵。在某些實施方案中,反義多核苷酸劑通過皮下或靜脈注射施用給受試者。在某些實施方案中,生理特徵和症狀是以下中的一個或多個:受試者的PD-L1 mRNA水平、 PD-L1蛋白水平,或PD-L1表達的減少通過以下方面來間接評估:通過測量受試者樣品(例如,血清樣品)中的PD-L1生物活性的降低或PD-L1水平來評估,通過測量傳染原中存在的蛋白質、核酸或碳水化合物的減少來評估,通過評估針對傳染源的抗體或免疫細胞來免疫反應來評估,通過一種或多種感染體徵或症狀(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來評估,通過測量受試者血清中的乙肝抗原(HBsAg)、HBeAg或HB cccDNA的水平來評估,通過檢測受試者的抗HBsAg抗體水平來評估。 序列的簡要說明 According to another aspect of the present invention, a method for changing the physiological characteristics of a PD-L1-related disease or condition in a subject compared to the physiological characteristics of the PD-L1-related disease or condition before treatment of the subject is provided, the method comprising administering to the subject an effective amount of any of the above-mentioned antisense polynucleotide agent embodiments or any of the above-mentioned compositions of the present invention embodiments to change the physiological characteristics of the PD-L1 disease or condition in the subject. In certain embodiments, the antisense polynucleotide agent is administered to the subject by subcutaneous or intravenous injection. In certain embodiments, the physiological characteristics and symptoms are one or more of the following: a decrease in the subject's PD-L1 mRNA level, PD-L1 protein level, or PD-L1 expression is assessed indirectly by measuring a decrease in PD-L1 biological activity or PD-L1 level in a sample (e.g., a serum sample) from the subject, by measuring a decrease in the presence of a protein, nucleic acid, or carbohydrate in an infectious agent, by assessing an immune response to an infectious agent by antibodies or immune cells, by a decrease in one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by measuring hepatitis B antigen (HBsAg), HBeAg, or HB in the subject's serum. The level of cccDNA is assessed by testing the level of anti-HBsAg antibodies in the subjects .
SEQ ID NO:1和SEQ ID NO:2(反向互補)是智人CD274 /PD-L1 轉錄變體1, mRNA [NCBI 參考序列:NM_014143.4] 。SEQ ID NO: 1 and SEQ ID NO: 2 (reverse complement) are Homo sapiens CD274 /PD-L1 transcript variant 1, mRNA [NCBI Reference Sequence: NM_014143.4].
SEQ ID NO:3和 SEQ ID NO:4 (反向互補)是Mus musculus(家鼠)PD-L1 mRNA [NCBI 參考序列:NM_021893.3]。SEQ ID NO: 3 and SEQ ID NO: 4 (reverse complement) are Mus musculus (house mouse) PD-L1 mRNA [NCBI Reference Sequence: NM_021893.3].
SEQ ID NO:5-168如表1所示,均為有義鏈序列。SEQ ID NOs: 5-168 are shown in Table 1, all of which are sense chain sequences.
SEQ ID NO:169-332如表1所示,為反義鏈序列。SEQ ID NO: 169-332 are shown in Table 1, which are antisense chain sequences.
SEQ ID NO:333-496如表2所示,為經過化學修飾的序列。SEQ ID NOs: 333-496 are shown in Table 2 and are chemically modified sequences.
SEQ ID NO:497-602如表3所示,遞送分子在每條有義鏈的3'端或5'端表示為“GLX-__”。SEQ ID NOs: 497-602 are shown in Table 3, and the delivery molecule at the 3' end or 5' end of each sense strand is represented as "GLX-__".
本發明部分包括RNAi劑,例如但不限於雙鏈(ds)RNAi劑,其能夠抑制PD-L1基因表達。本發明部分還包括包含PD-L1 RNAi劑的組合物以及所述組合物的使用方法。本文公開的PD-L1 RNAi劑可以附著於遞送化合物以遞送至細胞,包括肝細胞。本發明的藥物組合物可以包括至少一種dsRNAPD-L1劑和遞送化合物。在本發明的組合物和方法的一些實施方案中,遞送化合物是含GalNAc的遞送化合物。遞送至細胞的PD-L1 RNAi劑能夠抑制PD-L1基因表達,從而降低細胞中該基因的PD-L1蛋白產物的活性。本發明的dsRNAi劑可用於治療PD-L1相關疾病和病症。The present invention includes, in part, RNAi agents, such as but not limited to double-stranded (ds) RNAi agents, which can inhibit PD-L1 gene expression. The present invention also includes, in part, compositions comprising PD-L1 RNAi agents and methods of using the compositions. The PD-L1 RNAi agents disclosed herein can be attached to a delivery compound for delivery to cells, including hepatocytes. The pharmaceutical compositions of the present invention may include at least one dsRNA PD-L1 agent and a delivery compound. In some embodiments of the compositions and methods of the present invention, the delivery compound is a GalNAc-containing delivery compound. The PD-L1 RNAi agent delivered to cells can inhibit PD-L1 gene expression, thereby reducing the activity of the PD-L1 protein product of the gene in the cell. The dsRNAi agent of the present invention can be used to treat PD-L1 related diseases and disorders.
在本發明的一些實施方案中,降低細胞或受試者中的PD-L1表達分別治療與細胞或受試者中的PD-L1表達相關的疾病或病症。可通過降低PD-L1活性來治療的疾病和病症的非限制性實例是:緩解或改善與不想要的或過度的PD-L1表達相關的一種或多種症狀(如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕),原發性腫瘤或轉移性腫瘤的腫瘤負荷的減少或轉移的預防。“治療”還可以指與未治療時的預期生存期相比延長生存期。In some embodiments of the invention, reducing PD-L1 expression in a cell or subject treats a disease or condition associated with PD-L1 expression in a cell or subject, respectively. Non-limiting examples of diseases and conditions that can be treated by reducing PD-L1 activity are: alleviation or improvement of one or more symptoms associated with unwanted or excessive PD-L1 expression (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), reduction of tumor burden in primary or metastatic tumors, or prevention of metastasis. "Treatment" may also refer to prolonging survival compared to the expected survival without treatment.
如本文所用,“G”、“C”、“A”和“U”通常分別代表含有鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶作為鹼基的核苷酸。然而,應理解,術語“核糖核苷酸”或“核苷酸”也可以指修飾的核苷酸(如下文進一步詳述)或替代替換部分。本領域技術人員理解,鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶可以被其他部分替換,而不會顯著改變包含帶有此類替換部分的核苷酸的寡核苷酸的鹼基配對特性。例如,但不限於,包含肌苷作為鹼基的核苷酸可以與含有腺嘌呤、胞嘧啶或尿嘧啶的核苷酸鹼基配對。因此,在本發明的核苷酸序列中,含有尿嘧啶、鳥嘌呤或腺嘌呤的核苷酸可以被含有例如肌苷的核苷酸替換。包含此類替換部分的序列是本發明的實施例。As used herein, "G", "C", "A" and "U" generally represent nucleotides containing guanine, cytosine, adenine and uracil as bases, respectively. However, it should be understood that the term "ribonucleotide" or "nucleotide" can also refer to modified nucleotides (as further described below) or alternative replacement moieties. Those skilled in the art understand that guanine, cytosine, adenine and uracil can be replaced by other moieties without significantly changing the base pairing properties of the oligonucleotide containing nucleotides with such replacement moieties. For example, but not limited to, nucleotides containing inosine as a base can be paired with nucleotide bases containing adenine, cytosine or uracil. Therefore, in the nucleotide sequences of the present invention, nucleotides containing uracil, guanine or adenine can be replaced by nucleotides containing, for example, inosine. Sequences containing such replacement moieties are embodiments of the present invention.
本文使用的“ CD274 ” , “程序性細胞死亡-配體1” 與術語“B7 同源物 1 (B7-H1)” 、 “程序性死亡配體 1”互換使用,或“ PD-L1 ”是指天然存在的編碼PD-L1蛋白的基因,其來自任何脊椎動物或哺乳動物來源,包括但不限於人類、牛、雞、齧齒動物、小鼠、大鼠、豬、綿羊、靈長類動物、猴子和豚鼠,除非另有說明。該術語還指保留天然PD-L1的至少一種體內或體外活性的天然PD-L1的片段和變體。人類PD-L1基因的參考序列的氨基酸和完整編碼序列可以在例如GenBank Ref Seq Accession No. NM_014143.4(SEQ ID NO:1和SEQ ID NO:2)、Mus musculus(家鼠) NM_021893.3 (SEQ ID NO:3 和 SEQ ID NO:4)中找到。使用公開可用的數據庫(例如 GenBank、UniProt、Ensembl 和 OMIM)可以輕鬆獲得PD-L1 mRNA序列的更多示例。As used herein, "CD274", "programmed cell death-ligand 1" is used interchangeably with the terms "B7 homolog 1 (B7-H1)", "programmed death ligand 1", or "PD-L1" refers to a naturally occurring gene encoding a PD-L1 protein from any vertebrate or mammalian source, including but not limited to humans, cows, chickens, rodents, mice, rats, pigs, sheep, primates, monkeys and guinea pigs, unless otherwise indicated. The term also refers to fragments and variants of native PD-L1 that retain at least one in vivo or in vitro activity of native PD-L1. The amino acid and complete coding sequence of the reference sequence of the human PD-L1 gene can be found, for example, in GenBank Ref Seq Accession No. NM_014143.4 (SEQ ID NO: 1 and SEQ ID NO: 2), Mus musculus (house mouse) NM_021893.3 (SEQ ID NO: 3 and SEQ ID NO: 4). More examples of PD-L1 mRNA sequences can be easily obtained using publicly available databases such as GenBank, UniProt, Ensembl, and OMIM.
以下描述了如何製備和使用包含PD-L1單鏈(ssRNA)和dsRNA的組合物來抑制PD-L1基因表達,以及用於治療由PD-L1基因表達引起或受其調節的疾病和病症的組合物和方法。術語“RNAi”在本領域中也是已知的,並且可以稱為“siRNA”。The following describes how to prepare and use compositions comprising PD-L1 single chain (ssRNA) and dsRNA to inhibit PD-L1 gene expression, as well as compositions and methods for treating diseases and disorders caused or regulated by PD-L1 gene expression. The term "RNAi" is also known in the art and may be referred to as "siRNA".
如本文所用,術語“RNAi”是指包含RNA並通過RNA誘導沉默複合體(RISC)途徑介導RNA轉錄物的靶向切割的藥劑。如本領域所知,RNAi靶區域是指在基因轉錄過程中形成的mRNA分子的核苷酸序列的連續部分,包括在初級轉錄產物的RNA加工過程中的產物mRNA。序列的靶部分將至少足夠長,以用作該部分或該部分附近的 RNAi指導切割的底物。靶序列的長度可為8-30個核苷酸(含端值)、10-30個核苷酸(含端值)、12-25個核苷酸(含端值)、15-23個核苷酸(含端值)、16-23個核苷酸(含端值)或18-23個核苷酸(含端值),包括每個所述範圍內的所有較短長度。在本發明的一些實施例中,靶序列的長度為9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25或26個核苷酸。在某些實施例中,靶序列的長度為9至26個核苷酸(含端值),包括其間的所有子範圍和整數。例如,儘管並非旨在限制,但在本發明的某些實施方案中,靶序列的長度為8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個核苷酸,且該序列與PD-L1基因的RNA轉錄物的至少一部分完全互補或至少基本互補。本發明的一些方面包括包含一種或多種PD-L1 dsRNA藥劑和藥學上可接受的載體的藥物組合物。在本發明的某些實施方案中,如本文所述的PD-L1 RNAi 抑制PD-L1蛋白的表達。As used herein, the term "RNAi" refers to an agent that contains RNA and mediates targeted cleavage of RNA transcripts through an RNA-induced silencing complex (RISC) pathway. As known in the art, an RNAi target region refers to a continuous portion of the nucleotide sequence of an mRNA molecule formed during gene transcription, including product mRNAs during RNA processing of primary transcription products. The target portion of the sequence will be at least long enough to serve as a substrate for RNAi-guided cleavage near the portion or portions. The length of the target sequence may be 8-30 nucleotides (inclusive), 10-30 nucleotides (inclusive), 12-25 nucleotides (inclusive), 15-23 nucleotides (inclusive), 16-23 nucleotides (inclusive), or 18-23 nucleotides (inclusive), including all shorter lengths within each of the ranges. In some embodiments of the present invention, the target sequence is 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, or 26 nucleotides in length. In certain embodiments, the target sequence is 9 to 26 nucleotides in length (inclusive), including all subranges and integers therebetween. For example, although not intended to be limiting, in certain embodiments of the present invention, the target sequence is 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides in length, and the sequence is fully complementary or at least substantially complementary to at least a portion of the RNA transcript of the PD-L1 gene. Some aspects of the invention include pharmaceutical compositions comprising one or more PD-L1 dsRNA agents and a pharmaceutically acceptable carrier. In certain embodiments of the invention, the PD-L1 RNAi as described herein inhibits the expression of PD-L1 protein.
本文使用的“dsRNA藥劑”是指含有 RNA 或 RNA 樣(例如,化學修飾的 RNA)寡核苷酸分子的組合物,該寡核苷酸分子能夠以序列特異性方式降解或抑制目標 mRNA 的信使 RNA (mRNA) 轉錄物的翻譯。儘管不希望侷限於特定理論,但本發明的 dsRNA藥劑可以通過 RNA 干擾機制(即通過與哺乳動物細胞的 RNA 干擾途徑機制(RNA 誘導的沉默複合物或 RISC)相互作用來誘導 RNA 干擾)或通過任何替代機制或途徑起作用。本領域中熟知用於沉默植物、無脊椎動物和脊椎動物細胞中的基因的方法是[參見例如(Sharp et al., Genes Dev. 2001, 15:485; Bernstein, et al., (2001) Nature 409:363; Nykanen, et al., (2001) Cell 107:309; and Elbashir, et al., (2001) Genes Dev. 15:188)],其中每一篇的公開內容均以引用的方式全文併入本文中]。本領域已知的基因沉默程序可與本文提供的公開內容結合使用,以抑制PD-L1的表達。As used herein, a "dsRNA agent" refers to a composition containing an RNA or RNA-like (e.g., chemically modified RNA) oligonucleotide molecule that is capable of degrading or inhibiting translation of a messenger RNA (mRNA) transcript of a target mRNA in a sequence-specific manner. Although not wishing to be limited to a particular theory, the dsRNA agents of the present invention may act through an RNA interference mechanism (i.e., by inducing RNA interference by interacting with the RNA interference pathway mechanism of mammalian cells (RNA-induced silencing complex or RISC)) or through any alternative mechanism or pathway. Methods for silencing genes in plant, invertebrate and vertebrate cells are well known in the art [see, e.g., (Sharp et al., Genes Dev. 2001, 15:485; Bernstein, et al., (2001) Nature 409:363; Nykanen, et al., (2001) Cell 107:309; and Elbashir, et al., (2001) Genes Dev. 15:188)], the disclosures of each of which are incorporated herein by reference in their entirety]. Gene silencing procedures known in the art can be used in conjunction with the disclosure provided herein to inhibit the expression of PD-L1.
本文公開的 dsRNA劑由一條有義鏈和一條反義鏈組成,包括但不限於:短干擾 RNA (siRNA)、RNAi 劑、微 RNA (miRNA)、短髮夾 RNA (shRNA) 和切丁酶底物。本文描述的 dsRNA劑的反義鏈至少部分與目標mRNA 互補。本領域中已知不同長度的dsRNA雙鏈結構可用於抑制靶基因表達。例如,已知具有19、20、21、22和23個鹼基對的雙鏈結構的dsRNA可有效誘導RNA干擾(Elbashir et al., EMBO 2001, 20:6877-6888)。本領域中還已知較短或較長的RNA雙鏈結構也可有效誘導RNA干擾。在某些實施方案中,有義鏈和反義鏈的長度可以相同或不同。在某些實施方案中,每條鏈的長度不超過40個核苷酸。在某些實施方案中,每條鏈的長度不超過30個核苷酸。在某些實施方案中,每條鏈的長度不超過25個核苷酸。在某些實施方案中,每條鏈的長度不超過23個核苷酸。在某些實施方案中,每條鏈的長度不超過21個核苷酸。在某些實施方案中,RNAi劑的有義鏈和反義鏈的長度可以分別為15至49個核苷酸。在某些實施方案中,反義鏈的長度獨立地為15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個核苷酸。在某些實施方案中,有義鏈的長度獨立地為15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48或49個核苷酸。在某些實施方案中,有義鏈和反義鏈的長度均為21個核苷酸。在某些實施方案中,有義鏈與反義鏈互補或基本互補,互補區域的長度為15至23個核苷酸。在某些實施方案中,互補區域的長度為19-21個核苷酸。在某些實施方案中,互補區域的長度為 14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29 或 30 個核苷酸。本發明的某些實施方案中的PD-L1 dsRNA可以包括至少一條長度至少為 21 nt 的鏈,或者可以具有基於表 1-3 中任一個中列出的序列之一的較短雙鏈體,但與表 1-3 中列出的 dsRNA相比,一端或兩端分別減少 1、2、3 或 4 個核苷酸也可能有效。在本發明的一些實施方案中, PD-L1 dsRNA藥劑可具有來自表 1-3 中的一個或多個序列的至少 15、16、17、18、19、20 或更多個連續核苷酸的部分序列,並且其抑制PD-L1基因表達的能力與包含完整序列的dsRNA產生的抑制水平相差不超過 5%、10%、15%、20%、25% 或 30%。表1-3中公開的有義序列、反義序列和雙鏈體可在本文中稱為“親本”序列,這意味著表1-3中公開的序列可如本文所述進行修飾、縮短、加長、包括替換等,所得序列在本發明的方法和組合物中保留其親本序列的全部或至少一部分功效。本發明的 dsRNA中包含的有義鏈和反義鏈是獨立選擇的。如本文所用,術語“獨立選擇”是指兩個或更多個相似元素中的每一個可以獨立於其他元素的選擇而進行選擇。例如,雖然並非旨在限制,但在製備本發明的 dsRNA時,可以選擇兩條鏈的“元素”以包括在雙鏈中。一個選定的元素,即有義序列可以是 SEQ ID NO: 334(如表 2 所示),而另一個選定的元素,即反義序列,可以是 SEQ ID NO: 416,或者可以是與其親本序列 SEQ ID NO: 416 相比經過修飾、縮短、加長和/或包括 1、2 或 3 個替換的 SEQ ID NO: 416。應當理解,本發明的雙鏈不必同時包括表1-3中所示的雙鏈中成對的有義和反義序列。表中每個有義和反義鏈序列後面緊跟著其SEQ ID NO。The dsRNA agents disclosed herein consist of a sense strand and an antisense strand, including but not limited to: short interfering RNA (siRNA), RNAi agents, micro RNA (miRNA), short hairpin RNA (shRNA) and Dicer substrates. The antisense strand of the dsRNA agents described herein is at least partially complementary to the target mRNA. It is known in the art that dsRNA duplex structures of different lengths can be used to inhibit target gene expression. For example, dsRNAs with duplex structures of 19, 20, 21, 22 and 23 base pairs are known to effectively induce RNA interference (Elbashir et al., EMBO 2001, 20:6877-6888). It is also known in the art that shorter or longer RNA duplex structures can also effectively induce RNA interference. In certain embodiments, the length of the sense strand and the antisense strand can be the same or different. In certain embodiments, the length of each strand is no more than 40 nucleotides. In certain embodiments, the length of each strand is no more than 30 nucleotides. In certain embodiments, the length of each strand is no more than 25 nucleotides. In certain embodiments, the length of each strand is no more than 23 nucleotides. In certain embodiments, the length of each strand is no more than 21 nucleotides. In certain embodiments, the length of the sense strand and the antisense strand of the RNAi agent can be 15 to 49 nucleotides, respectively. In some embodiments, the length of the antisense strand is independently 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides. In some embodiments, the length of the sense strand is independently 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, or 49 nucleotides. In some embodiments, the length of the sense strand and the antisense strand are both 21 nucleotides. In some embodiments, the sense strand and the antisense strand complement or substantially complement each other, and the complementary region is 15 to 23 nucleotides in length. In some embodiments, the complementary region is 19-21 nucleotides in length. In some embodiments, the complementary region is 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30 nucleotides in length. The PD-L1 dsRNA in certain embodiments of the present invention may include at least one strand of at least 21 nt in length, or may have a shorter duplex based on one of the sequences listed in any one of Tables 1-3, but compared with the dsRNA listed in Tables 1-3, it may also be effective to reduce 1, 2, 3 or 4 nucleotides at one or both ends, respectively. In some embodiments of the present invention, the PD-L1 dsRNA agent may have a partial sequence of at least 15, 16, 17, 18, 19, 20 or more consecutive nucleotides from one or more sequences in Tables 1-3, and its ability to inhibit PD-L1 gene expression differs from the inhibition level produced by the dsRNA containing the complete sequence by no more than 5%, 10%, 15%, 20%, 25% or 30%. The sense sequences, antisense sequences and duplexes disclosed in Tables 1-3 may be referred to herein as "parent" sequences, meaning that the sequences disclosed in Tables 1-3 may be modified, shortened, lengthened, include substitutions, etc. as described herein, and the resulting sequences retain all or at least a portion of the efficacy of their parent sequences in the methods and compositions of the present invention. The sense and antisense strands contained in the dsRNA of the present invention are independently selected. As used herein, the term "independent selection" means that each of two or more similar elements can be selected independently of the selection of other elements. For example, although not intended to be limiting, when preparing the dsRNA of the present invention, "elements" of the two strands can be selected to be included in the duplex. One selected element, the sense sequence, may be SEQ ID NO: 334 (as shown in Table 2), and the other selected element, the antisense sequence, may be SEQ ID NO: 416, or may be SEQ ID NO: 416 that has been modified, shortened, lengthened, and/or includes 1, 2, or 3 substitutions compared to its parent sequence SEQ ID NO: 416. It should be understood that the double chains of the present invention do not necessarily include the paired sense and antisense sequences in the double chains shown in Tables 1-3. Each sense and antisense chain sequence in the table is followed by its SEQ ID NO.
本發明的組合物和方法的某些實施方案包括在組合物中和/或施用給受試者的單鏈RNA。例如,表1-3中任一表所列的反義鏈可以是組合物或施用給受試者的組合物,以降低受試者體內的PD-L1多肽活性和/或PD-L1基因表達。表1顯示了某些PD-L1 dsRNA劑反義鏈和有義鏈核心延伸鹼基序列。可包括在本發明的某些組合物中和/或施用在本發明的某些方法中的單鏈反義分子在本文中稱為“單鏈反義劑”或“反義多核苷酸劑”。可包括在本發明的某些組合物中和/或施用在本發明的某些方法中的單鏈有義分子在本文中稱為“單鏈有義劑”或“有義多核苷酸劑”。術語“鹼基序列”在本文中用於指沒有化學修飾或遞送化合物的多核苷酸序列。例如,表1中所示的有義鏈 CCAUUCCAGAAAGAUGAGGAA (SEQ ID NO: 6 ) 是表2中SEQ ID NO: 334的鹼基序列和表3中SEQ ID NO: 497的鹼基序列,其中顯示了SEQ ID NO: 334和SEQ ID NO:497及其化學修飾和遞送化合物。本文公開的序列可分配標識符。例如,單鏈有義序列可以用“有義鏈SS#”來識別;單鏈反義序列可以用“反義鏈AS#”來識別,並且包括有義鏈和反義鏈的雙鏈可以用“雙鏈AD#/AV#”來識別。Certain embodiments of the compositions and methods of the present invention include single-stranded RNA in the composition and/or administered to the subject. For example, the antisense chain listed in any of Tables 1-3 can be a composition or a composition administered to the subject to reduce the PD-L1 polypeptide activity and/or PD-L1 gene expression in the subject. Table 1 shows certain PD-L1 dsRNA agent antisense chain and sense chain core extension base sequences. Single-stranded antisense molecules that may be included in certain compositions of the present invention and/or administered in certain methods of the present invention are referred to herein as "single-stranded antisense agents" or "antisense polynucleotide agents". Single-stranded sense molecules that may be included in certain compositions of the present invention and/or administered in certain methods of the present invention are referred to herein as "single-stranded sense agents" or "sense polynucleotide agents". The term "base sequence" is used herein to refer to a polynucleotide sequence without chemical modifications or delivery compounds. For example, the sense strand CCAUUCCAGAAAGAUGAGGAA (SEQ ID NO: 6) shown in Table 1 is the base sequence of SEQ ID NO: 334 in Table 2 and the base sequence of SEQ ID NO: 497 in Table 3, wherein SEQ ID NO: 334 and SEQ ID NO: 497 and chemical modifications and delivery compounds thereof are shown. Sequences disclosed herein may be assigned identifiers. For example, a single-strand sense sequence may be identified by "sense strand SS#"; a single-strand antisense sequence may be identified by "antisense strand AS#", and a double strand including a sense strand and an antisense strand may be identified by "double strand AD#/AV#".
表1包括有義鏈和反義鏈,並提供了表1中同一行上由有義鏈和反鏈形成的雙鏈的標識號。在本發明的某些實施方案中,反義序列包括反義序列位置1處的核鹼基u或核鹼基a。在本發明的某些實施方案中,反義序列包括反義序列位置1處的核鹼基u。如本文所用,有義鏈和反義鏈中的術語“匹配位置”是當兩條鏈為雙鏈時每條鏈中“配對”的位置。例如,在21個核鹼基的有義鏈和21個核鹼基的反義鏈中,有義鏈位置1處的核鹼基和反義鏈位置21處的核鹼基處於“匹配位置”。在又一個非限制性示例中,在23個核鹼基的有義鏈和23個核鹼基的反義鏈中,有義鏈的核鹼基2和反義鏈的22位處於匹配位置。在又一個非限制性示例中,在18個核鹼基的有義鏈和18個核鹼基的反義鏈中,有義鏈的1位的核鹼基和反義鏈的18位的核鹼基處於匹配位置,有義鏈的核鹼基4和反義鏈的核鹼基15處於匹配位置。本領域技術人員將瞭解如何識別是或將是雙鏈和成對鏈的有義鏈和反義鏈中的匹配位置。Table 1 includes a sense chain and an antisense chain, and provides the identification number of the double chain formed by the sense chain and the antisense chain on the same line in Table 1. In certain embodiments of the present invention, the antisense sequence includes a nucleobase u or a nucleobase a at position 1 of the antisense sequence. In certain embodiments of the present invention, the antisense sequence includes a nucleobase u at position 1 of the antisense sequence. As used herein, the term "matching position" in the sense chain and the antisense chain is the position of "pairing" in each chain when the two chains are double chains. For example, in a sense chain of 21 nucleobases and an antisense chain of 21 nucleobases, the nucleobase at position 1 of the sense chain and the nucleobase at position 21 of the antisense chain are in a "matching position". In yet another non-limiting example, in a 23-nucleobase sense chain and a 23-nucleobase antisense chain, nucleobase 2 of the sense chain and nucleobase 22 of the antisense chain are in matching positions. In yet another non-limiting example, in an 18-nucleobase sense chain and an 18-nucleobase antisense chain, nucleobase 1 of the sense chain and nucleobase 18 of the antisense chain are in matching positions, and nucleobase 4 of the sense chain and nucleobase 15 of the antisense chain are in matching positions. Those skilled in the art will understand how to identify matching positions in sense chains and antisense chains that are or will be double chains and paired chains.
表1中的第一列表示包含同一表行中的有義和反義序列的雙鏈體的雙鏈AV/AD #。例如,表1公開了指定為雙鏈AV00938.um的雙鏈,其包含有義鏈SEQ ID NO: 6和反義鏈SEQ ID NO: 170。因此,表1中的每一行都標識了本發明的雙鏈,每個雙鏈都包含同一行中顯示的有義和反義序列,每個雙鏈的分配標識符顯示在行的第一列中。The first column in Table 1 indicates the duplex AV/AD # of the duplex containing the sense and antisense sequences in the same table row. For example, Table 1 discloses a duplex designated as duplex AV00938.um, which contains the sense strand SEQ ID NO: 6 and the antisense strand SEQ ID NO: 170. Thus, each row in Table 1 identifies a duplex of the present invention, each duplex containing the sense and antisense sequences shown in the same row, and the assigned identifier of each duplex is shown in the first column of the row.
在本發明的方法的一些實施方案中,向受試者施用包含表1-3中任一個所示的多核苷酸序列的RNAi劑。在本發明的一些實施方案中,向受試者施用的RNAi劑包括雙鏈體,該雙鏈體包括表1中列出的至少一個鹼基序列,包括0、1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23或24個序列修飾。在本發明的方法的一些實施方案中,將包含表1-3中任一個所示的多核苷酸序列的RNAi劑附著到遞送分子上,遞送分子的非限制性實例是包含GalNAc化合物或GLS-15 *化合物的遞送化合物。In some embodiments of the methods of the present invention, an RNAi agent comprising a polynucleotide sequence shown in any one of Tables 1-3 is administered to a subject. In some embodiments of the present invention, the RNAi agent administered to a subject comprises a duplex comprising at least one base sequence listed in Table 1, comprising 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23 or 24 sequence modifications. In some embodiments of the methods of the present invention, an RNAi agent comprising a polynucleotide sequence shown in any one of Tables 1-3 is attached to a delivery molecule, a non-limiting example of a delivery molecule is a delivery compound comprising a GalNAc compound or a GLS-15* compound.
表 1:未修飾的PD-L1 RNAi 劑反義鏈和有義鏈序列。所有序列均以 5' 至 3' 方向顯示。雙鏈AV/AD #是分配給表中同一行中兩條鏈的雙鏈的編號。
表2顯示了本發明的某些化學修飾的PD-L1 RNAi劑反義鏈和有義鏈序列。在本發明的方法的一些實施方案中,將具有表2中所示的多核苷酸序列的RNAi劑施用於細胞和/或受試者。在本發明的方法的一些實施方案中,將具有表2中所示的多核苷酸序列的RNAi劑施用於受試者。在本發明的一些實施方案中,施用於受試者的RNAi劑包括表2一行中標識的雙鏈體,並且包括表2中同一行第三列和第六列中分別顯示的有義鏈和反義鏈序列中的序列修飾。在本發明的方法的一些實施方案中,表2中所示的序列可以附著於(本文中也稱為“結合於”)能夠將RNAi劑遞送至受試者的細胞和/或組織的化合物。可用於本發明的某些實施方案中的遞送化合物的非限制性示例是含GalNAc的化合物或含GLS-15*的化合物。在表2中,第一列表示表1中所示的鹼基序列的雙鏈AV#。表2公開了雙鏈AV#,還顯示了雙鏈的有義和反義序列中包含的化學修飾。例如,表1顯示了鹼基單鏈序列SEQ ID NO:6(有義序列)和SEQ ID NO:170(反義序列),它們一起構成雙鏈體雙鏈,標識為:雙鏈AV#AV00938.um,表2列出了雙鏈AV#AV00938,這表明SEQ ID NO:334和SEQ ID NO:416的雙鏈分別包括SEQ ID NO:6和SEQ ID NO:170的鹼基序列,但分別具有第三列和第六列中所示的有義和反義序列中所示的化學修飾。表2第二列中的“有義鏈SS#”是同一行第三列中所示的有義序列(包括修飾)的分配標識符。表2第五列中的“反義鏈AS#”是第六列中所示的反義序列(包括修飾)的分配標識符。Table 2 shows certain chemically modified PD-L1 RNAi agent antisense and sense strand sequences of the present invention. In some embodiments of the methods of the present invention, an RNAi agent having a polynucleotide sequence shown in Table 2 is administered to a cell and/or a subject. In some embodiments of the methods of the present invention, an RNAi agent having a polynucleotide sequence shown in Table 2 is administered to a subject. In some embodiments of the present invention, the RNAi agent administered to a subject comprises a duplex identified in a row of Table 2 and comprises sequence modifications in the sense strand and antisense strand sequences shown in the third and sixth columns of the same row of Table 2, respectively. In some embodiments of the methods of the present invention, the sequences shown in Table 2 may be attached to (also referred to herein as "bound to") a compound capable of delivering the RNAi agent to cells and/or tissues of a subject. Non-limiting examples of delivery compounds that can be used in certain embodiments of the present invention are compounds containing GalNAc or compounds containing GLS-15*. In Table 2, the first column represents the double-stranded AV# of the base sequence shown in Table 1. Table 2 discloses the double-stranded AV# and also shows the chemical modifications contained in the sense and antisense sequences of the double-stranded. For example, Table 1 shows the base single strand sequences SEQ ID NO:6 (sense sequence) and SEQ ID NO:170 (antisense sequence), which together form a duplex duplex, identified as: duplex AV#AV00938.um, and Table 2 lists duplex AV#AV00938, which indicates that the duplexes of SEQ ID NO:334 and SEQ ID NO:416 include the base sequences of SEQ ID NO:6 and SEQ ID NO:170, respectively, but have the chemical modifications shown in the sense and antisense sequences shown in the third and sixth columns, respectively. The "sense strand SS#" in the second column of Table 2 is the assigned identifier for the sense sequence (including modifications) shown in the third column of the same row. The "antisense strand AS#" in the fifth column of Table 2 is the assigned identifier for the antisense sequence (including modifications) shown in the sixth column.
表 2:提供了具有化學修飾的PD-L1 RNAi劑反義鏈和有義鏈序列。所有序列均顯示為5'至3'。這些序列用於本文描述的某些
體外測試研究。
表3顯示了本發明的某些化學修飾的PD-L1 RNAi 劑反義鏈和有義鏈序列。在本發明的方法的一些實施方案中,將表3中所示的RNAi劑施用於細胞和/或受試者。在本發明的方法的一些實施方案中,將具有表3中所示的多核苷酸序列的RNAi劑施用於受試者。在本發明的一些實施方案中,施用於受試者的RNAi劑包括表3中的一行中第一列標識的雙鏈體,並且包括表3中同一行的第三列和第六列中分別顯示的有義鏈和反義鏈序列的序列修飾和/或遞送化合物。這些序列用於本文其他地方描述的某些體內測試研究。在本發明的方法的一些實施方案中,表3中所示的序列可以附著於(本文也稱為“結合於”)用於遞送的化合物,其非限制性示例是含GalNAc的化合物,其中遞送化合物在表3中第三列的有義鏈上標識為“GLX-n”。如本文所用,“GLX-n”用於表示“GLS-n*”或“GLO-n”遞送化合物(“X”可以是“S”或“O”),而GLX-0可以是任何可在合成過程中附著於寡核苷酸3'端的“GLS-n*”和“GLO-n”遞送化合物。如本文所用並在表3中所示,“GLX-n”用於表示所附的含GalNAc化合物是化合物GLS-1*、GLS-2*、GLS-3*、GLS-4*、GLS-5*、GLS-6*、GLS-7*、GLS-8*、GLS-9*、GLS-10*、GLS-11*、GLS-12*、GLS-13*、GLS-14*、GLS-15*、GLS-16*、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種,每種化合物的結構在本文其他地方提供。本領域技術人員將能夠製備和使用本發明的dsRNA化合物,其中所附著的遞送化合物是GLS-1*、GLS-2*、GLS-3*、GLS-4*、GLS-5*、GLS-6*、GLS-7*、GLS-8*、GLS-9*、GLS-10*、GLS-11*、GLS-12*、GLS-13*、GLS-14*、GLS-15*、GLS-16*、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任意一種。表3的第一列提供了分配給該行中有義和反義序列的雙鏈的雙鏈AD#。例如,雙鏈AD#AD00880是有義鏈SEQ ID NO:497和反義鏈SEQ ID NO:550的雙鏈。表3中的每一行都提供了一條有義鏈和一條反義鏈,並公開了所示有義鏈和反義鏈的雙鏈。表3第二列中的“有義鏈SS#”是同一行第3列中所示有義序列(包括修飾)的分配標識符。表3第五列中的“反義鏈AS#”是第六列中所示反義序列(包括修飾)的分配標識符。某些連接的含GalNAc的“GLO-n”或“GLS-n*”化合物的標識符顯示為GLS-5*、GLS-15*或GLX-0,並且應當理解,另一種“GLO-n”或“GLS-n*”化合物可以替代顯示為GLO-0的化合物,所得化合物包括在本發明的方法和/或組合物的實施例中。Table 3 shows certain chemically modified PD-L1 RNAi agent antisense and sense strand sequences of the present invention. In some embodiments of the methods of the present invention, the RNAi agent shown in Table 3 is administered to a cell and/or a subject. In some embodiments of the methods of the present invention, an RNAi agent having a polynucleotide sequence shown in Table 3 is administered to a subject. In some embodiments of the present invention, the RNAi agent administered to a subject comprises a duplex identified in the first column of a row in Table 3 and comprises sequence modifications and/or delivery compounds of the sense and antisense strand sequences shown in the third and sixth columns of the same row in Table 3, respectively. These sequences are used in certain in vivo testing studies described elsewhere herein. In some embodiments of the methods of the present invention, the sequences shown in Table 3 can be attached to (also referred to herein as "bound to") a compound for delivery, a non-limiting example of which is a GalNAc-containing compound, wherein the delivery compound is identified as "GLX-n" on the sense strand in the third column of Table 3. As used herein, "GLX-n" is used to represent a "GLS-n*" or "GLO-n" delivery compound ("X" can be "S" or "O"), and GLX-0 can be any "GLS-n*" and "GLO-n" delivery compound that can be attached to the 3' end of an oligonucleotide during synthesis. As used herein and shown in Table 3, "GLX-n" is used to indicate that the enclosed GalNAc-containing compound is any one of compounds GLS-1*, GLS-2*, GLS-3*, GLS-4*, GLS-5*, GLS-6*, GLS-7*, GLS-8*, GLS-9*, GLS-10*, GLS-11*, GLS-12*, GLS-13*, GLS-14*, GLS-15*, GLS-16*, GLO-1, GLO-2, GLO-3, GLO-4, GLO-5, GLO-6, GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO-13, GLO-14, GLO-15 and GLO-16, the structures of each of which are provided elsewhere herein. Those skilled in the art will be able to prepare and use the dsRNA compounds of the invention wherein the attached delivery compound is any one of GLS-1*, GLS-2*, GLS-3*, GLS-4*, GLS-5*, GLS-6*, GLS-7*, GLS-8*, GLS-9*, GLS-10*, GLS-11*, GLS-12*, GLS-13*, GLS-14*, GLS-15*, GLS-16*, GLO-1, GLO-2, GLO-3, GLO-4, GLO-5, GLO-6, GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO-13, GLO-14, GLO-15 and GLO-16. The first column of Table 3 provides the double chain AD# assigned to the double chain of the sense and antisense sequences in that row. For example, double chain AD#AD00880 is a double chain of sense chain SEQ ID NO:497 and antisense chain SEQ ID NO:550. Each row in Table 3 provides a sense chain and an antisense chain, and discloses the double chain of the sense chain and antisense chain shown. The "Sense Chain SS#" in the second column of Table 3 is the assigned identifier of the sense sequence (including modifications) shown in the third column of the same row. The "Antisense Chain AS#" in the fifth column of Table 3 is the assigned identifier of the antisense sequence (including modifications) shown in the sixth column. The identifiers for certain linked GalNAc-containing "GLO-n" or "GLS-n*" compounds are shown as GLS-5*, GLS-15*, or GLX-0, and it should be understood that another "GLO-n" or "GLS-n*" compound can be substituted for the compound shown as GLO-0, and the resulting compounds are included in the embodiments of the methods and/or compositions of the present invention.
表3提供了化學修飾的PD-L1RNAi劑反義鏈和有義鏈序列。所有序列均以5'至3'表示。這些序列用於本文其他地方描述的某些體內測試研究。
體內研究中使用的遞送分子在每個有義鏈的3'端或5'端表示為“GLO-n”或“GLS-n*”。
在本發明的某些實施例中,dsRNA(本文中也稱為“雙鏈體”)是表1-3之一中公開的dsRNA。表1-3中的每一行都公開了包含該表行中的有義鏈序列和反義鏈序列的雙鏈體。除了表1-3中公開的雙鏈體之外,應理解的是,在一些實施例中,本發明的雙鏈體可以包括與表1-3中所示的有義和反義序列相差零個、一個、兩個或三個核苷酸的核苷酸序列。因此,作為非限制性例子,在某些實施方案中,本發明的雙鏈體中的反義鏈可以是分別與SEQ ID NO: 169、180、196、218或248的核苷酸序列相差零個、一個、兩個或三個核苷酸的核苷酸序列。In certain embodiments of the present invention, the dsRNA (also referred to herein as a "duplex") is a dsRNA disclosed in one of Tables 1-3. Each row in Tables 1-3 discloses a duplex comprising the sense strand sequence and the antisense strand sequence in that row of the table. In addition to the duplexes disclosed in Tables 1-3, it should be understood that in some embodiments, the duplexes of the present invention may include nucleotide sequences that differ from the sense and antisense sequences shown in Tables 1-3 by zero, one, two, or three nucleotides. Therefore, as a non-limiting example, in certain embodiments, the antisense strand in the duplex of the present invention may be a nucleotide sequence that differs from the nucleotide sequence of SEQ ID NO: 169, 180, 196, 218, or 248 by zero, one, two, or three nucleotides, respectively.
應理解,本發明的雙鏈中的有義鏈序列和反義鏈序列可以獨立選擇。因此,本發明的dsRNA可以包括表1-3中一行中公開的有義鏈和反義鏈的雙鏈。或者,在本發明的dsRNA中,dsRNA中所選的有義鏈和反義鏈中的一條或兩條可包括表1-3中所示的序列,但有義鏈和反義鏈中的一條或兩條包括來自親本序列的1、2、3或更多個核鹼基取代。在某些實施方案中,所選序列可以比其親本序列更長或更短。因此,本發明包括的dsRNA劑可以但不必包括表1-3中作為雙鏈公開的有義鏈和反義鏈對的精確序列。Should be understood that the sense strand sequence and the antisense strand sequence in the double strand of the present invention can be selected independently. Therefore, the dsRNA of the present invention can include the sense strand and the double strand of the antisense strand disclosed in a row in Table 1-3. Or, in the dsRNA of the present invention, one or two of the sense strand and the antisense strand selected in the dsRNA can include the sequence shown in Table 1-3, but one or two of the sense strand and the antisense strand include 1,2,3 or more nucleobase substitutions from the parent sequence. In some embodiments, the selected sequence can be longer or shorter than its parent sequence. Therefore, the dsRNA agent included in the present invention can but need not include the exact sequence of the sense strand and the antisense strand disclosed as double strands in Table 1-3.
在某些實施方案中,dsRNA劑包含一條有義鏈和一條反義鏈,反義鏈中的核苷酸位置2至18包含與PD-L1 RNA轉錄物互補的區域,其中互補的區域包含與表1-3之一中列出的反義序列之一相差0、1、2或3個核苷酸的至少15個連續核苷酸,並且任選地包含靶向配體。在一些情況下,與PD-L1 RNA轉錄物互補的區域包含至少15、16、17、18或19個連續核苷酸,所述連續核苷酸與表1-3之一中列出的反義序列之一相差不超過3個核苷酸。在本發明的dsRNA劑的一些實施方案中,dsRNA的反義鏈至少基本與SEQ ID NO:1的靶區域中的任一個互補,並在表1-3的任一個中提供。在某些實施方案中,本發明的dsRNA劑的反義鏈完全與SEQ ID NO:1的靶區域中的任一個互補,並在表1-3的任一個中提供。在某些實施方案中,dsRNA劑包括表1-3的任一個中列出的有義鏈序列,並且有義鏈序列至少基本與dsRNA劑中的反義鏈序列互補。在其他實施方案中,本發明的dsRNA劑包括表1-3的任一個中列出的有義鏈序列,並且有義鏈序列完全與dsRNA劑中的反義鏈序列互補。在一些情況下,本發明的dsRNA劑包括表1-3的任一個中列出的反義鏈序列。本發明的dsRNA劑的一些實施方案包括表1-3任一個中公開的有義和反義序列的雙鏈。如本文所述,應理解,本發明的雙鏈中的有義鏈和反義鏈可以獨立地選擇。 錯配 In certain embodiments, the dsRNA agent comprises a sense strand and an antisense strand, wherein nucleotide positions 2 to 18 in the antisense strand comprise a region complementary to a PD-L1 RNA transcript, wherein the complementary region comprises at least 15 consecutive nucleotides that differ by 0, 1, 2, or 3 nucleotides from one of the antisense sequences listed in one of Tables 1-3, and optionally comprises a targeting ligand. In some cases, the region complementary to a PD-L1 RNA transcript comprises at least 15, 16, 17, 18, or 19 consecutive nucleotides that differ by no more than 3 nucleotides from one of the antisense sequences listed in one of Tables 1-3. In some embodiments of the dsRNA agents of the present invention, the antisense strand of the dsRNA is at least substantially complementary to any one of the target regions of SEQ ID NO: 1 and is provided in any one of Tables 1-3. In certain embodiments, the antisense strand of the dsRNA agents of the present invention is completely complementary to any one of the target regions of SEQ ID NO: 1 and is provided in any one of Tables 1-3. In certain embodiments, the dsRNA agents include a sense strand sequence listed in any one of Tables 1-3, and the sense strand sequence is at least substantially complementary to the antisense strand sequence in the dsRNA agent. In other embodiments, the dsRNA agents of the present invention include a sense strand sequence listed in any one of Tables 1-3, and the sense strand sequence is completely complementary to the antisense strand sequence in the dsRNA agent. In some cases, the dsRNA agents of the invention include an antisense strand sequence listed in any one of Tables 1-3. Some embodiments of the dsRNA agents of the invention include a double strand of sense and antisense sequences disclosed in any one of Tables 1-3 . As described herein, it is understood that the sense strand and antisense strand in the double strand of the invention can be independently selected.
本領域技術人員已知,錯配對於dsRNA的療效是可以被容忍的,尤其是dsRNA末端區域的錯配。某些錯配的容忍度更高,例如擺動鹼基對G:U和A:C的錯配對於療效的容忍度更高(Du et el., A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites. Nucleic Acids Res. 2005 Mar 21;33(5):1671-7. Doi: 10.1093/nar/gki312. Nucleic Acids Res. 2005;33(11):3698)。在本發明的方法和化合物的一些實施方案中, PD-L1 dsRNA藥劑可能包含一個或多個與PD-L1靶序列的錯配。在某些實施方案中,本發明的PD-L1 dsRNA藥劑不含錯配。在某些實施方案中,本發明的PD-L1 dsRNA劑包含不超過1個錯配。在某些實施方案中,本發明的PD-L1 dsRNA劑包含不超過2個錯配。在某些實施方案中,本發明的PD-L1 dsRNA劑包含不超過3個錯配。在本發明的一些實施方案中,PD-L1 dsRNA劑的反義鏈包含與PD-L1靶序列的錯配,這些錯配不位於互補區域的中心。在某些實施方案中,PD-L1 dsRNA劑的反義鏈包含1、2、3、4或更多個錯配,這些錯配位於互補區域的5'或3'端之一或兩者的最後的5、4、3、2 或1個核苷酸內。本文描述的方法和/或本領域已知的方法可用於確定與PD-L1靶序列錯配的PD-L1 dsRNA藥劑是否有效抑制PD-L1基因的表達。 互補性 It is known to those skilled in the art that mismatches are tolerated for the therapeutic effect of dsRNA, especially mismatches in the terminal regions of dsRNA. Some mismatches are more tolerated, for example, mismatches of the dangling base pairs G:U and A:C are more tolerated for therapeutic effect (Du et el., A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites. Nucleic Acids Res. 2005 Mar 21;33(5):1671-7. Doi: 10.1093/nar/gki312. Nucleic Acids Res. 2005;33(11):3698). In some embodiments of the methods and compounds of the present invention, the PD-L1 dsRNA agent may contain one or more mismatches with the PD-L1 target sequence. In certain embodiments, the PD-L1 dsRNA agent of the present invention contains no mismatches. In certain embodiments, the PD-L1 dsRNA agent of the present invention contains no more than 1 mismatch. In certain embodiments, the PD-L1 dsRNA agent of the present invention contains no more than 2 mismatches. In certain embodiments, the PD-L1 dsRNA agent of the present invention contains no more than 3 mismatches. In some embodiments of the present invention, the antisense strand of the PD-L1 dsRNA agent contains mismatches with the PD-L1 target sequence, and these mismatches are not located in the center of the complementary region. In certain embodiments, the antisense strand of the PD-L1 dsRNA agent comprises 1, 2, 3, 4 or more mismatches located within the last 5, 4, 3, 2 or 1 nucleotides of one or both of the 5' or 3' ends of the complementary region. The methods described herein and/or methods known in the art can be used to determine whether a PD-L1 dsRNA agent that mismatches with a PD-L1 target sequence is effective in inhibiting the expression of the PD-L1 gene. Complementarity
如本文所用,除非另有說明,術語“互補”在用於描述第一核苷酸序列(例如, PD-L1 dsRNA劑有義鏈或靶向PD-L1 mRNA)相對於第二核苷酸序列(例如,PD-L1 dsRNA劑反義鏈或單鏈反義多核苷酸)時,是指包括第一核苷酸序列的寡核苷酸或多核苷酸與包括第二核苷酸序列的寡核苷酸或多核苷酸雜交[在哺乳動物生理條件下(或 體外類似條件下)形成鹼基對氫鍵]並在某些條件下形成雙鏈或雙螺旋結構的能力。可以應用其他條件,例如生物體內可能發生的生理相關條件。根據所述雜交核苷酸的最終應用,技術人員應該能夠確定最適合於測試兩個序列的互補性的一組條件。互補序列包括沃森-克裡克鹼基對或非沃森-克裡克鹼基對,包括天然或修飾的核苷酸或核苷酸模擬物,只要能滿足上述關於其雜交能力的條件即可。序列同一性或互補性與修飾無關。 As used herein, unless otherwise indicated, the term "complementary" when used to describe a first nucleotide sequence (e.g., a PD-L1 dsRNA agent sense strand or a targeted PD-L1 mRNA) relative to a second nucleotide sequence (e.g., a PD-L1 dsRNA agent antisense strand or a single-stranded antisense polynucleotide) refers to the ability of an oligonucleotide or polynucleotide comprising the first nucleotide sequence to hybridize [form base-pair hydrogen bonds under mammalian physiological conditions (or similar conditions in vitro )] with an oligonucleotide or polynucleotide comprising the second nucleotide sequence and form a double chain or double helical structure under certain conditions. Other conditions may apply, such as physiologically relevant conditions that may occur in an organism. Depending on the ultimate application of the hybridized nucleotides, a skilled person should be able to determine a set of conditions that are most suitable for testing the complementarity of the two sequences. Complementary sequences include Watson-Crick base pairs or non-Watson-Crick base pairs, including natural or modified nucleotides or nucleotide mimetics, as long as the above conditions regarding their hybridization ability are met. Sequence identity or complementarity is independent of modification.
互補序列,例如,在本文所述的PD-L1 dsRNA內,包括在包含第一核苷酸序列的寡核苷酸或多核苷酸與包含第二核苷酸序列的寡核苷酸或多核苷酸之間的鹼基配對,所述鹼基配對貫穿於其中一個核苷酸序列的整個長度或貫穿於這兩個核苷酸序列的整個長度。本文中,此類序列可稱為彼此“完全互補”。應理解,在實施方案中,當兩個寡核苷酸被設計為在雜交時形成一個或多個單鏈突出端時,此類突出端在本文的互補性確定方面不被視為錯配。例如,包含一個長度為19個核苷酸的寡核苷酸和另一個長度為20個核苷酸的寡核苷酸的PD-L1 dsRNA劑,其中較長的寡核苷酸包含與較短的寡核苷酸完全互補的19個核苷酸的序列,在本文所述的目的下仍能稱其為“完全互補”。因此,本文所用的“完全互補”是指第一個多核苷酸的連續序列中的所有鹼基(100%)將與第二個多核苷酸的連續序列中相同數量的鹼基雜交。連續序列可以包括第一個或第二個核苷酸序列的全部或部分。Complementary sequences, for example, within the PD-L1 dsRNA described herein, include base pairing between an oligonucleotide or polynucleotide comprising a first nucleotide sequence and an oligonucleotide or polynucleotide comprising a second nucleotide sequence, the base pairing extending throughout the entire length of one of the nucleotide sequences or throughout the entire length of both nucleotide sequences. Such sequences may be referred to herein as being "fully complementary" to each other. It should be understood that, in embodiments, when two oligonucleotides are designed to form one or more single-stranded overhangs upon hybridization, such overhangs are not considered mismatches in the determination of complementarity herein. For example, a PD-L1 dsRNA agent comprising one oligonucleotide of 19 nucleotides in length and another oligonucleotide of 20 nucleotides in length, wherein the longer oligonucleotide comprises a 19-nucleotide sequence that is completely complementary to the shorter oligonucleotide, can still be referred to as "completely complementary" for the purposes described herein. Thus, "completely complementary" as used herein means that all bases (100%) in the contiguous sequence of the first polynucleotide will hybridize with the same number of bases in the contiguous sequence of the second polynucleotide. The contiguous sequence may include all or part of the first or second nucleotide sequence.
本文所用的術語“基本上互補”是指在雜交的核鹼基序列對中,第一個多核苷酸的連續序列中至少約85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%(但不是全部)的鹼基將與第二個多核苷酸的連續序列中相同數量的鹼基雜交。術語“基本互補”可用於指第一序列相對於第二序列,如果這兩個序列在雜交時形成多達15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個鹼基對(bp)的雙鏈體中包含一個或多個(例如至少1、2、3、4或5個)錯配的鹼基對,但同時保留在與其最終應用(例如,通過RISC通路抑制PD-L1基因表達)最相關的條件下進行雜交能力。The term "substantially complementary" as used herein means that in a hybridized nucleobase sequence pair, at least about 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% (but not all) of the bases in the contiguous sequence of the first polynucleotide will hybridize with the same number of bases in the contiguous sequence of the second polynucleotide. The term "substantially complementary" may be used to refer to a first sequence relative to a second sequence if the two sequences, when hybridized, form a duplex of up to 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30 base pairs (bp) containing one or more (e.g., at least 1, 2, 3, 4 or 5) mismatched base pairs, but at the same time retain the ability to hybridize under conditions most relevant to its ultimate application (e.g., inhibition of PD-L1 gene expression via the RISC pathway).
術語“部分互補”在本文中可用於指雜交的核鹼基序列對,其中第一多核苷酸的連續序列中至少75%(但不是全部)的鹼基將與第二多核苷酸的連續序列中相同數量的鹼基雜交。在某些實施方案中,“部分互補”是指第一多核苷酸的連續序列中至少76%、77%、78%、79%、80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%的鹼基將與第二多核苷酸的連續序列中相同數量的鹼基雜交。The term "partial complement" can be used herein to refer to a hybridized nucleobase sequence pair, wherein at least 75% (but not all) of the bases in the contiguous sequence of the first polynucleotide will hybridize with the same number of bases in the contiguous sequence of the second polynucleotide. In certain embodiments, "partial complement" refers to at least 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% of the bases in the contiguous sequence of the first polynucleotide will hybridize with the same number of bases in the contiguous sequence of the second polynucleotide.
本文使用的術語“互補”、“完全互補”、“基本互補”和“部分互補”是指PD-L1 dsRNA藥物的有義鏈和反義鏈之間、PD-L1 dsRNA藥物的反義鏈與靶PD-L1 mRNA序列之間或單鏈反義寡核苷酸與靶PD-L1 mRNA序列之間的鹼基配對。應理解,術語“PD-L1 dsRNA藥物的反義鏈”可以指“PD-L1反義多核苷酸藥物”的相同序列。The terms "complementary", "completely complementary", "substantially complementary" and "partially complementary" as used herein refer to base pairing between the sense and antisense strands of a PD-L1 dsRNA drug, between the antisense strand of a PD-L1 dsRNA drug and a target PD-L1 mRNA sequence, or between a single-stranded antisense oligonucleotide and a target PD-L1 mRNA sequence. It should be understood that the term "antisense strand of a PD-L1 dsRNA drug" may refer to the same sequence of a "PD-L1 antisense polynucleotide drug".
如本文所用,術語“基本相同”或“基本同一性”用於指代核酸序列時,是指包含與參考序列相比具有至少約85%或更多序列同一性的序列的核酸序列,優選至少90%、至少91%、至少92%、至少93%、至少94%、至少95%、至少96%、至少97%、至少98%或至少99%的序列。通過在比較窗口上比較兩個最佳比對的序列來確定序列同一性百分比。通過確定兩個序列中出現相同核酸鹼基的位置數以得出匹配位置數,將匹配位置數除以比較窗口中的總位置數,並將結果乘以100以得出序列同一性百分比來計算百分比。本文所公開的發明涵蓋與本文所公開的核苷酸序列基本相同的核苷酸序列,例如,在表1-3中列出的。在某些實施方案中,本文公開的序列與本文(例如表1-3)公開的序列完全相同,或至少約85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%相同。As used herein, the term "substantially identical" or "substantial identity" when used to refer to a nucleic acid sequence refers to a nucleic acid sequence comprising a sequence having at least about 85% or more sequence identity compared to a reference sequence, preferably at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99%. The percent sequence identity is determined by comparing the two best aligned sequences over a comparison window. The percent is calculated by determining the number of positions where the same nucleic acid base occurs in the two sequences to obtain the number of matching positions, dividing the number of matching positions by the total number of positions in the comparison window, and multiplying the result by 100 to obtain the percent sequence identity. The invention disclosed herein encompasses nucleotide sequences substantially identical to the nucleotide sequences disclosed herein, for example, those listed in Tables 1-3. In certain embodiments, the sequences disclosed herein are identical, or at least about 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identical to the sequences disclosed herein (e.g., Tables 1-3).
本文所用的術語“包含序列的鏈”是指包含核苷酸鏈的寡核苷酸,該核苷酸鏈由使用標準核苷酸命名法所指的序列描述。本文所用的術語“雙鏈RNA”或“dsRNA”是指包括具有雜交雙鏈區域的RNA分子或分子複合物的RNAi,該雜交雙鏈區域包含兩個反向平行且基本上或完全互補的核酸鏈,其相對於靶PD-L1 RNA具有“有義”和“反義”方向。雙鏈區域可以是任何長度,只要允許通過RISC途徑特異性降解所需的靶PD-L1 RNA,但通常長度範圍為9至30個鹼基對,例如長度為15-30個鹼基對。考慮到9至30個鹼基對之間的雙鏈體,該雙鏈體的長度可以是在該範圍內的任意長度,例如9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30,以及其間任意子範圍的長度,包括但不限於15-30個鹼基對、15-26個鹼基對、15-23個鹼基對、15-22個鹼基對、15-21個鹼基對、15-20個鹼基對、15-19個鹼基對、15-18個鹼基對、15-17個鹼基對、18-30個鹼基對、18-26個鹼基對、18-23個鹼基對、18-22個鹼基對,18-21個鹼基對、18-20個鹼基對、19-30個鹼基對、19-26個鹼基對、19-23個鹼基對、19-22個鹼基對、19-21個鹼基對、19-20個鹼基對、20-30個鹼基對、20-26個鹼基對、20-25個鹼基對、20-24個鹼基對、20-23個鹼基對、20-22個鹼基對、20-21個鹼基對、21-30個鹼基對、21-26個鹼基對、21-25個鹼基對、21-24個鹼基對、21-23個鹼基對或21-22個鹼基對。通過用Dicer和類似酶加工在細胞中產生的PD-L1 dsRNA劑的長度通常在19-22個鹼基對的範圍內。PD-L1 dsRNA藥劑的雙鏈區中的一條鏈包含與靶PD-L1 RNA區域基本互補的序列。形成雙鏈結構的兩條鏈可來自具有至少一個自互補區域的單個RNA分子,或者可由兩個或更多個單獨的RNA分子形成。當雙鏈區由單個分子的兩條鏈形成時,該分子可具有由一條鏈的3'端和形成雙鏈結構的另一條鏈的5'端之間的單鏈核苷酸鏈(本文稱為“髮夾環”)隔開的雙鏈區。在本發明的一些實施方案中,髮夾結構包含至少1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20或更多個未配對核苷酸。當PD-L1 dsRNA劑的兩條基本上互補的鏈由單獨的RNA分子組成時,這些分子不需要但可以共價連接。當兩條鏈通過髮夾環以外的方式共價連接時,連接結構稱為“接頭”。術語“ siRNA ”也用於本文中指本文所述的dsRNA劑。The term "chain comprising a sequence" as used herein refers to an oligonucleotide comprising a nucleotide chain described by a sequence referred to using standard nucleotide nomenclature. The term "double-stranded RNA" or "dsRNA" as used herein refers to an RNAi comprising an RNA molecule or a complex of molecules having a hybrid duplex region comprising two antiparallel and substantially or completely complementary nucleic acid chains having "sense" and "antisense" orientations relative to the target PD-L1 RNA. The duplex region can be of any length as long as it allows for specific degradation of the desired target PD-L1 RNA via the RISC pathway, but is typically in the range of 9 to 30 base pairs in length, such as 15-30 base pairs in length. Considering duplexes between 9 and 30 base pairs, the length of the duplex can be any length within this range, for example 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30, and any subrange therebetween. Length, including but not limited to 15-30 base pairs, 15-26 base pairs, 15-23 base pairs, 15-22 base pairs, 15-21 base pairs, 15-20 base pairs, 15-19 base pairs, 15-18 base pairs, 15-17 base pairs, 18-30 base pairs, 18-26 base pairs base pairs, 18-23 base pairs, 18-22 base pairs, 18-21 base pairs, 18-20 base pairs, 19-30 base pairs, 19-26 base pairs, 19-23 base pairs, 19-22 base pairs, 19-21 base pairs, 19-20 base pairs, 20-30 base pairs, 20- 26 base pairs, 20-25 base pairs, 20-24 base pairs, 20-23 base pairs, 20-22 base pairs, 20-21 base pairs, 21-30 base pairs, 21-26 base pairs, 21-25 base pairs, 21-24 base pairs, 21-23 base pairs or 21-22 base pairs. The length of the PD-L1 dsRNA agent produced in the cell by processing with Dicer and similar enzymes is generally in the range of 19-22 base pairs. One of the double-stranded regions of the PD-L1 dsRNA agent contains a sequence that is substantially complementary to the target PD-L1 RNA region. The two chains forming the duplex structure may be from a single RNA molecule having at least one self-complementary region, or may be formed by two or more separate RNA molecules. When the duplex region is formed by two chains of a single molecule, the molecule may have a duplex region separated by a single-stranded nucleotide chain (referred to herein as a "hairpin loop") between the 3' end of one chain and the 5' end of the other chain forming the duplex structure. In some embodiments of the invention, the hairpin structure comprises at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20 or more unpaired nucleotides. When the two substantially complementary strands of the PD-L1 dsRNA agent consist of separate RNA molecules, these molecules need not but can be covalently linked. When the two strands are covalently linked by means other than a hairpin loop, the linking structure is referred to as a "linker." The term "siRNA" is also used herein to refer to the dsRNA agents described herein.
在本發明的一些實施方案中,PD-L1 dsRNA劑可以包括在dsRNA劑的一端或兩端沒有未配對核苷酸或核苷酸類似物的有義序列和反義序列。沒有未配對核苷酸的序列的末端稱為“平端”,並且沒有核苷酸突出。如果dsRNA劑的兩端都是平端,則dsRNA被稱為“平端”。在本發明的一些實施方案中,dsRNA劑的第一端是平端,在某些實施方案中,dsRNA劑的第二端是平端,並且在本發明的某些實施方案中,PD-L1 dsRNA劑的兩端都是平端。In some embodiments of the present invention, the PD-L1 dsRNA agent may include a sense sequence and an antisense sequence without unpaired nucleotides or nucleotide analogs at one or both ends of the dsRNA agent. The ends of the sequences without unpaired nucleotides are called "blunt ends" and have no nucleotide overhangs. If both ends of the dsRNA agent are blunt ends, the dsRNA is called "blunt ends". In some embodiments of the present invention, the first end of the dsRNA agent is a blunt end, in some embodiments, the second end of the dsRNA agent is a blunt end, and in some embodiments of the present invention, both ends of the PD-L1 dsRNA agent are blunt ends.
在本發明的dsRNA試劑的一些實施方案中,dsRNA不具有一個或兩個平端。在這種情況下,dsRNA試劑鏈的末端至少有一個未配對的核苷酸。例如,當dsRNA一條鏈的3'端延伸到另一條鏈的5'端之外,或反之亦然時,存在核苷酸突出端。dsRNA可以包含至少1、2、3、4、5、6或更多個核苷酸的突出端。核苷酸突出端可以包含或由核苷酸/核苷類似物(包括脫氧核苷酸/核苷)組成。應理解,在某些實施方案中,核苷酸突出端位於dsRNA試劑的有義鏈上、dsRNA試劑的反義鏈上或dsRNA試劑的兩端,並且突出端的核苷酸可存在於dsRNA反義鏈或有義鏈的5'端、3'端或兩端。在本發明的某些實施方案中,突出端中的一個或多個核苷酸被核苷硫代磷酸酯取代。In some embodiments of the dsRNA reagent of the present invention, the dsRNA does not have one or two blunt ends. In this case, the end of the dsRNA reagent chain has at least one unpaired nucleotide. For example, when the 3' end of one dsRNA chain extends beyond the 5' end of the other chain, or vice versa, there is a nucleotide overhang. The dsRNA can include an overhang of at least 1, 2, 3, 4, 5, 6 or more nucleotides. The nucleotide overhang can include or be composed of nucleotide/nucleoside analogs (including deoxynucleotides/nucleosides). It should be understood that in certain embodiments, the nucleotide overhang is located on the sense chain of the dsRNA reagent, on the antisense chain of the dsRNA reagent, or at both ends of the dsRNA reagent, and the nucleotides of the overhang can be present at the 5' end, 3' end or both ends of the dsRNA antisense chain or sense chain. In certain embodiments of the invention, one or more nucleotides in the overhang are substituted with nucleoside phosphorothioates.
本文所用的術語“反義鏈”或“引導鏈”是指PD-L1 dsRNA劑的鏈,該鏈包括與PD-L1靶序列基本互補的區域。本文所用的術語“有義鏈”或“過客鏈”是指PD-L1 dsRNA劑的鏈,該鏈包括與PD-L1 dsRNA劑的反義鏈區域基本互補的區域。 修飾 As used herein, the term "antisense strand" or "guide strand" refers to the strand of a PD-L1 dsRNA agent that includes a region that is substantially complementary to the PD-L1 target sequence. As used herein, the term "sense strand" or "passenger strand" refers to the strand of a PD-L1 dsRNA agent that includes a region that is substantially complementary to the antisense strand region of the PD-L1 dsRNA agent. Modifications
在本發明的某些實施方案中,PD-L1 RNAi劑的RNA經過化學修飾以增強穩定性和/或一種或多種其他有益特性。本發明的某些實施方案中的核酸可通過本領域中已充分確立的方法合成和/或修飾,例如,在“Current protocols in Nucleic Acid Chemistry," Beaucage, S. L. et al. (Eds.), John Wiley & Sons, Inc., New York, N.Y., USA,其通過引用併入本文。本發明的PD-L1 dsRNA藥劑的某些實施方案中可存在的修飾包括,例如,(a)末端修飾,例如,5'末端修飾(磷酸化、綴合、反向連接等)、3'末端修飾(綴合、DNA核苷酸、反向連接等),(b)鹼基修飾,例如,用穩定鹼基、不穩定鹼基或與擴展的配對物庫鹼基配對的鹼基替換、鹼基(脫鹼基核苷酸)或結合鹼基,(c)糖修飾(例如,在2'位置或4'位置)或糖的替換,以及(d)主鏈修飾,包括磷酸二酯鍵的修飾或替換。在本發明的PD-L1 dsRNA劑、 PD-L1反義多核苷酸和PD-L1有義多核苷酸的某些實施方案中有用的RNA化合物的具體例子包括但不限於包含修飾的主鏈或無天然核苷間鍵的RNA。作為非限制性例子,具有修飾主鏈的RNA可能在主鏈中不具有磷原子。在核苷間主鏈中不具有磷原子的RNA可以稱為寡核苷。在本發明的某些實施方案中,修飾的RNA在其核苷間主鏈中具有磷原子。In certain embodiments of the present invention, the RNA of the PD-L1 RNAi agent is chemically modified to enhance stability and/or one or more other beneficial properties. The nucleic acids in certain embodiments of the present invention can be synthesized and/or modified by methods that are well established in the art, for example, in "Current protocols in Nucleic Acid Chemistry," Beaucage, S. L. et al. (Eds.), John Wiley & Sons, Inc., New York, N.Y., USA, which is incorporated herein by reference. Modifications that may be present in certain embodiments of the PD-L1 dsRNA agents of the present invention include, for example, (a) terminal modifications, such as 5' terminal modifications (phosphorylation, conjugation, reverse ligation, etc.), 3' terminal modifications (conjugation, DNA nucleotides, reverse ligation, etc.), (b) base modifications, such as replacement of a base with a stable base, an unstable base, or a base that pairs with an expanded library of partner bases, a base (abasic nucleotides), or a conjugated base, (c) sugar modifications (e.g., at the 2' position or the 4' position) or replacement of sugars, and (d) backbone modifications, including modification or replacement of phosphodiester bonds. Specific examples of RNA compounds useful in certain embodiments of the PD-L1 dsRNA agents, PD-L1 antisense polynucleotides, and PD-L1 sense polynucleotides of the present invention include, but are not limited to, RNAs containing modified backbones or no natural internucleoside bonds. As a non-limiting example, RNAs with modified backbones may not have phosphorus atoms in the backbone. RNAs without phosphorus atoms in the internucleoside backbone may be referred to as oligonucleosides. In certain embodiments of the present invention, the modified RNA has a phosphorus atom in its internucleoside backbone.
應理解的是,術語“RNA分子”或“RNA”或“核糖核酸分子”不僅涵蓋自然界中表達或發現的RNA分子,還包括包含一種或多種本文所述或本領域已知的核糖核苷酸/核糖核苷類似物或衍生物的RNA類似物和衍生物。術語“核糖核苷”和“核糖核苷酸”在本文中可互換使用。RNA分子可在核鹼基結構或核糖-磷酸骨架結構中進行修飾,例如如下所述,並且包含核糖核苷類似物或衍生物的分子必須保留形成雙鏈的能力。作為非限制性例子,RNA分子還可以包括至少一種修飾的核糖核苷,包括但不限於2'-O-甲基修飾的核苷、包含5'硫代磷酸酯基團的核苷、連接到膽固醇衍生物或十二烷酸雙癸醯胺基團的末端核苷、鎖定核苷、脫鹼基核苷、2'-脫氧-2'-氟修飾的核苷、2'-氨基修飾的核苷、2'-烷基修飾的核苷、嗎啉代核苷、氨基磷酸酯或包含非天然鹼基的核苷,或其任意組合。在本發明的一些實施方案中,RNA 分子包含至少 1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20 個或最多全長的 PD -L1 dsRNA藥物分子的核糖核苷,這些核糖核苷是修飾的核糖核苷。RNA 分子中這些多個修飾的核糖核苷中的每一個的修飾不必相同。It should be understood that the term "RNA molecule" or "RNA" or "ribonucleic acid molecule" encompasses not only RNA molecules expressed or found in nature, but also RNA analogs and derivatives comprising one or more ribonucleotide/ribonucleoside analogs or derivatives described herein or known in the art. The terms "ribonucleoside" and "ribonucleotide" are used interchangeably herein. RNA molecules can be modified in the nucleobase structure or the ribose-phosphate backbone structure, for example as described below, and the molecule comprising the ribonucleoside analog or derivative must retain the ability to form a double chain. As non-limiting examples, the RNA molecule may further include at least one modified ribonucleoside, including but not limited to a 2'-O-methyl modified nucleoside, a nucleoside containing a 5' phosphorothioate group, a terminal nucleoside linked to a cholesterol derivative or a dodecanoic acid bisdecylamide group, a locked nucleoside, a debasic nucleoside, a 2'-deoxy-2'-fluoro modified nucleoside, a 2'-amino modified nucleoside, a 2'-alkyl modified nucleoside, a morpholino nucleoside, a phosphoramidate, or a nucleoside containing an unnatural base, or any combination thereof. In some embodiments of the invention, the RNA molecule comprises at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20 or up to the full length of the PD-L1 dsRNA drug molecule, which are modified ribonucleosides. The modification of each of the multiple modified ribonucleosides in the RNA molecule need not be the same.
在本發明某些實施方案中的dsRNA劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸可包含一個或多個獨立選擇的修飾核苷酸和/或一個或多個獨立選擇的非磷酸二酯鍵。本文中用於指代選定元素(例如修飾核苷酸、非磷酸二酯鍵等)的術語“獨立選擇”是指兩個或多個選定元素可以但不必彼此相同。In certain embodiments of the present invention, the dsRNA agent, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide may contain one or more independently selected modified nucleotides and/or one or more independently selected non-phosphodiester bonds. The term "independently selected" used herein to refer to selected elements (e.g., modified nucleotides, non-phosphodiester bonds, etc.) means that two or more selected elements may, but need not, be identical to each other.
如本文所用,“核苷酸鹼基”、“核苷酸”或“核鹼基”是雜環嘧啶或嘌呤化合物,是所有核酸的標準成分,包括形成核苷酸腺嘌呤、鳥嘌呤、胞嘧啶、胸腺嘧啶和尿嘧啶的鹼基。核鹼基可進一步修飾以包括(但不限於):通用鹼基、疏水性鹼基、混雜鹼基、尺寸擴大的鹼基和氟化鹼基。術語“核糖核苷酸”或“核苷酸”可在本文中用於指未修飾的核苷酸、修飾的核苷酸或替代替代部分。本領域技術人員將認識到,鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶可被其他部分取代,而不會顯著改變包含帶有此類替代部分的核苷酸的寡核苷酸的鹼基配對特性。As used herein, "nucleotide bases", "nucleotides" or "nucleobases" are heterocyclic pyrimidine or purine compounds that are standard components of all nucleic acids, including bases that form the nucleotides adenine, guanine, cytosine, thymine and uracil. Nucleobases can be further modified to include, but are not limited to: universal bases, hydrophobic bases, mixed bases, size-expanded bases and fluorinated bases. The term "ribonucleotide" or "nucleotide" can be used herein to refer to unmodified nucleotides, modified nucleotides or alternative substitution moieties. Those skilled in the art will recognize that guanine, cytosine, adenine and uracil can be replaced by other moieties without significantly changing the base pairing properties of oligonucleotides containing nucleotides with such substitution moieties.
在一個實施例中,考慮用於本文所述方法和組合物的修飾RNA是肽核酸(PNA),其具有形成所需雙鏈結構的能力,並且允許或介導靶 RNA 通過 RISC 通路進行特異性降解。在本發明的某些實施例中,PD-L1 RNA干擾劑包括與靶PD-L1 RNA序列相互作用以指導靶PD-L1 RNA的裂解的單鏈RNA。In one embodiment, the modified RNA contemplated for use in the methods and compositions described herein is a peptide nucleic acid (PNA), which has the ability to form a desired double-stranded structure and allows or mediates specific degradation of the target RNA through the RISC pathway. In certain embodiments of the present invention, the PD-L1 RNA interferor includes a single-stranded RNA that interacts with a target PD-L1 RNA sequence to direct the cleavage of the target PD-L1 RNA.
修飾的RNA主鏈可包括例如硫代磷酸酯、手性硫代磷酸酯、二硫代磷酸酯、磷酸三酯、氨基烷基磷酸三酯、甲基和其它烷基膦酸酯(包括3'-亞烷基膦酸酯和手性膦酸酯)、亞膦酸酯、氨基磷酸酯(包括3'-氨基氨基磷酸酯和氨基烷基氨基磷酸酯)、硫代磷酸酯、硫代烷基膦酸酯、硫代烷基磷酸三酯和具有正常3'-5'鍵的硼烷磷酸酯、這些的2'-5'連接類似物以及具有反轉極性的那些(其中相鄰的核苷單元對以3'-5'至5'-3'或2'-5'至5'-2'連接)。還包括各種鹽、混合鹽和游離酸形式。製備含磷鍵的方法是本領域的常規方法,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA藥劑、某些修飾的PD-L1反義多核苷酸、和/或某些修飾的PD-L1有義多核苷酸。The RNA backbone of modification can include, for example, phosphorothioates, chiral phosphorothioates, phosphorodithioates, phosphotriesters, aminoalkylphosphotriesters, methyl and other alkylphosphonates (including 3'-alkylenephosphonates and chiral phosphonates), phosphinates, phosphoramidates (including 3'-aminophosphoramidates and aminoalkylphosphoramidates), phosphorothioates, thioalkylphosphonates, thioalkylphosphotriesters and boranephosphates with normal 3'-5' bonds, 2'-5' connection analogs of these and those with reversed polarity (wherein adjacent nucleoside unit pairs are connected with 3'-5' to 5'-3' or 2'-5' to 5'-2'). Various salts, mixed salts and free acid forms are also included. Methods for preparing phospho-bond-containing proteins are routine in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents, certain modified PD-L1 antisense polynucleotides, and/or certain modified PD-L1 sense polynucleotides of the present invention.
不含磷原子的修飾RNA主鏈具有由短鏈烷基或環烷基核苷間鍵、混合雜原子和烷基或環烷基核苷間鍵或一個或多個短鏈雜原子或雜環核苷間鍵形成的主鏈。這些包括具有嗎啉鍵(部分由核苷的糖部分形成)的主鏈;矽氧烷主鏈;硫化物、亞碸和碸主鏈;甲醯和硫代甲醯主鏈;亞甲基甲醯和硫代甲醯主鏈;含烯烴主鏈;氨基磺酸鹽主鏈;亞甲基亞氨基和亞甲基肼基主鏈;磺酸鹽和磺醯胺主鏈;醯胺主鏈;以及具有混合N、O、S和CH 2組成部分的其他主鏈。製備不包括磷原子的修飾RNA骨架的方法是本領域的常規做法,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA藥劑、某些修飾的PD-L1反義多核苷酸、和/或某些修飾的PD-L1有義多核苷酸。 The modified RNA backbone that does not contain a phosphorus atom has a backbone formed by short-chain alkyl or cycloalkyl nucleoside bonds, mixed heteroatom and alkyl or cycloalkyl nucleoside bonds, or one or more short-chain heteroatom or heterocyclic nucleoside bonds. These include backbones with morpholine bonds (formed in part by the sugar portion of the nucleoside); siloxane backbones; sulfide, sulfone, and sulfonate backbones; formyl and thioformyl backbones; methyleneformyl and thioformyl backbones; olefin-containing backbones; sulfamate backbones; methyleneimido and methylenehydrazino backbones; sulfonate and sulfonamide backbones; amide backbones; and other backbones with mixed N, O, S, and CH2 constituents. Methods for preparing modified RNA backbones that do not include phosphorus atoms are routine in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents, certain modified PD-L1 antisense polynucleotides, and/or certain modified PD-L1 sense polynucleotides of the present invention.
在本發明的某些實施方案中,RNA模擬物包括在PD-L1 dsRNA、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸中,例如但不限於:用新基團替換核苷酸單元的糖和核苷間鍵,即主鏈。在此類實施方案中,鹼基單元被保留以與適當的PD-L1核酸靶化合物雜交。一種這樣的寡聚化合物,即已顯示具有優異雜交性能的RNA模擬物,被稱為肽核酸(PNA)。在PNA化合物中,RNA的糖主鏈被含醯胺主鏈替換,特別是氨基乙基甘氨酸主鏈。核鹼基被保留並直接或間接地與主鏈醯胺部分的氮雜氮原子結合。製備RNA模擬物的方法在本領域中是常規實踐的,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA藥劑。In certain embodiments of the present invention, RNA mimetics are included in PD-L1 dsRNA, PD-L1 antisense polynucleotides and/or PD-L1 sense polynucleotides, for example but not limited to: replacing the sugar and internucleoside bonds of the nucleotide units, i.e., the backbone, with new groups. In such embodiments, the base units are retained to hybridize with appropriate PD-L1 nucleic acid target compounds. One such oligomeric compound, an RNA mimetic that has been shown to have excellent hybridization properties, is called a peptide nucleic acid (PNA). In PNA compounds, the sugar backbone of RNA is replaced by an amide-containing backbone, particularly an aminoethylglycine backbone. The nucleobase is retained and is directly or indirectly bound to the nitrogen-nitrogen atom of the amide portion of the backbone. Methods for preparing RNA mimetics are routinely practiced in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents of the present invention.
本發明的一些實施方案包括具有硫代磷酸酯骨架的RNA和具有雜原子骨架的寡核苷,特別是-CH 2-NH-CH 2-、-CH 2-N(CH 3)-O-CH 2-[稱為亞甲基(甲基亞氨基)或MMI骨架]、-CH 2-ON(CH 3)-CH 2-、-CH 2-N(CH 3)-N(CH 3)-CH 2-和-N(CH 3)-CH 2-[其中天然磷酸二酯骨架表示為-OPO-CH 2-]。製備具有硫代磷酸酯骨架的RNA和具有雜原子骨架的寡核苷的方法在本領域中是常規實踐的,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA劑、某些PD-L1反義多核苷酸和/或某些PD-L1有義多核苷酸。 Some embodiments of the present invention include RNAs having phosphorothioate backbones and oligonucleosides having heteroatom backbones, particularly -CH2 -NH- CH2- , -CH2- N ( CH3 )-O- CH2- [referred to as methylene (methylimino) or MMI backbones], -CH2- ON ( CH3 ) -CH2- , -CH2- N (CH3)-N( CH3 ) -CH2- , and -N( CH3 ) -CH2- [wherein the natural phosphodiester backbone is represented as -OPO- CH2- ]. Methods for preparing RNAs having phosphorothioate backbones and oligonucleosides having heteroatom backbones are routinely practiced in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents, certain PD-L1 antisense polynucleotides and/or certain PD-L1 sense polynucleotides of the present invention.
修飾的RNA還可以含有一個或多個取代的糖部分。本發明的PD-L1 dsRNA、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸可以在2'位置包含以下之一:OH;F;O-、S-或N-烷基;O-、S-或N-烯基;O-、S-或N-炔基;或O-烷基-O-烷基,其中烷基、烯基和炔基可以是取代或未取代的C 1至C 10烷基或C 2至C 10烯基和炔基。示例性的合適的修飾包括O[(CH 2) nO] mCH 3、O(CH 2) nOCH 3、O(CH 2) nNH 2、O(CH 2) nCH 3、O(CH 2) nONH 2和O(CH 2) nON[(CH 2) nCH 3)] 2,其中n和m為1至10。在其他實施方案中,dsRNA在2'位置包括以下之一:C 1至C 10低級烷基、取代的低級烷基、烷芳基、芳烷基、O-烷芳基或O-芳烷基、SH、SCH 3、OCN、Cl、Br、CN、CF 3、OCF 3、SOCH 3、SO 2CH 3、ONO 2、NO 2、N 3、NH 2、雜環烷基、雜環烷芳基、氨基烷基氨基、聚烷基氨基、取代的矽基、RNA切割基團、報告基團、嵌入劑、用於改善PD-L1 dsRNA藥物的藥代動力學性質的基團、或用於改善PD-L1dsRNA藥物、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的藥效學性質的基團,以及具有類似性質的其他取代基。在某些實施方案中,修飾包括2'-甲氧基乙氧基(2'-O-CH 2CH 2OCH 3,也稱為2'-O-(2-甲氧基乙基)或2'-MOE)( Martin et al., Helv. Chim. Acta, 1995, 78:486-504),即烷氧基-烷氧基。另一種示例性修飾是2'-二甲基氨基氧乙氧基,即O(CH 2) 2ON(CH 3) 2基團,也稱為2'-DMAOE,如下文實施例中所述,以及2'-二甲基氨基乙氧基乙氧基(在本領域中也稱為2'-O-二甲基氨基乙氧基乙基或2'-DMAEOE),即2'-O-CH 2-O-CH 2-N(CH 2) 2。製備所述修飾RNA的方法在本領域中是常規實踐的,並且此類方法可用於製備本發明的某些修飾PD-L1 dsRNA藥劑。 The modified RNA may also contain one or more substituted sugar moieties. The PD-L1 dsRNA, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide of the present invention may comprise one of the following at the 2' position: OH; F; O-, S- or N-alkyl; O-, S- or N-alkenyl; O-, S- or N-alkynyl; or O-alkyl-O-alkyl, wherein the alkyl, alkenyl and alkynyl groups may be substituted or unsubstituted C 1 to C 10 alkyl or C 2 to C 10 alkenyl and alkynyl groups. Exemplary suitable modifications include O[( CH2 ) nO ] mCH3 , O( CH2 ) nOCH3 , O(CH2) nNH2 , O( CH2 ) nCH3 , O( CH2 ) nONH2 , and O( CH2 ) nON [( CH2 ) nCH3 )] 2 , wherein n and m are 1-10. In other embodiments, the dsRNA includes one of the following at the 2' position: C1 to C10 lower alkyl, substituted lower alkyl, alkaryl, aralkyl, O-alkaryl or O-aralkyl, SH, SCH3 , OCN, Cl, Br, CN, CF3 , OCF3 , SOCH3 , SO2CH3, ONO2 , NO2 , N3 , NH2 , heterocycloalkyl, heterocycloalkaryl, aminoalkylamino, polyalkylamino, substituted silyl, RNA cleavage group, reporter group, intercalator, group for improving the pharmacokinetic properties of PD-L1 dsRNA drug, or group for improving the pharmacodynamic properties of PD-L1 dsRNA drug, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide, and other substituents with similar properties. In certain embodiments, the modification includes 2'-methoxyethoxy (2'-O-CH 2 CH 2 OCH 3 , also known as 2'-O-(2-methoxyethyl) or 2'-MOE) (Martin et al., Helv. Chim. Acta, 1995, 78:486-504), i.e., alkoxy-alkoxy. Another exemplary modification is 2'-dimethylaminooxyethoxy, i.e., O(CH 2 ) 2 ON(CH 3 ) 2 group, also known as 2'-DMAOE, as described in the Examples below, and 2'-dimethylaminoethoxyethoxy (also known in the art as 2'-O-dimethylaminoethoxyethyl or 2'-DMAEOE), i.e., 2'-O-CH 2 -O-CH 2 -N(CH 2 ) 2 . Methods for preparing such modified RNAs are routinely practiced in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents of the present invention.
其他修飾包括2'-甲氧基(2'-OCH 3)、2'-氨基丙氧基(2'-OCH 2CH 2CH 2NH 2)和2'-氟(2'-F)。還可在本發明的PD-L1 dsRNA劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的RNA上的其他位置進行類似修飾,特別是3'末端核苷酸上或2'-5'連接的PD-L1 dsRNA、PD-L1反義多核苷酸或PD-L1有義多核苷酸中的糖的3'位置,以及5'末端核苷酸的5'位置。PD-L1 dsRNA劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸還可具有糖模擬物,例如用環丁基部分代替戊呋喃糖。製備所述修飾的RNA的方法是本領域的常規做法,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA藥劑、PD-L1反義多核苷酸、和/或PD-L1有義多核苷酸。 Other modifications include 2'-methoxy (2'-OCH 3 ), 2'-aminopropoxy (2'-OCH 2 CH 2 CH 2 NH 2 ) and 2'-fluoro (2'-F). Similar modifications can also be made at other positions on the RNA of the PD-L1 dsRNA agent, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide of the present invention, particularly the 3' position of the sugar on the 3' terminal nucleotide or in the 2'-5' linked PD-L1 dsRNA, PD-L1 antisense polynucleotide or PD-L1 sense polynucleotide, and the 5' position of the 5' terminal nucleotide. The PD-L1 dsRNA agent, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide may also have a sugar mimetic, such as replacing the pentofuranosyl with a cyclobutyl moiety. Methods for preparing the modified RNA are routine in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents, PD-L1 antisense polynucleotides, and/or PD-L1 sense polynucleotides of the present invention.
在某些實施方案中,PD-L1 dsRNA劑、 PD-L1反義多核苷酸和/或PD-L1有義多核苷酸可能包括核鹼基(在本領域中通常簡稱為“鹼基”)修飾或取代。本文所用的“未修飾”或“天然”核鹼基包括嘌呤鹼基腺嘌呤和鳥嘌呤,以及嘧啶鹼基胸腺嘧啶、胞嘧啶和尿嘧啶。修飾的核鹼基包括其他合成和天然核鹼基,例如5-甲基胞嘧啶(5-Me-C)、5-羥甲基胞嘧啶、黃嘌呤、次黃嘌呤、2-氨基腺嘌呤、腺嘌呤和鳥嘌呤的6-甲基和其他烷基衍生物、腺嘌呤和鳥嘌呤的2-丙基和其他烷基衍生物、2-硫尿嘧啶、2-硫胸腺嘧啶和2-硫胞嘧啶、5-鹵尿嘧啶和胞嘧啶、5-炔丙基尿嘧啶和胞嘧啶、6-偶氮尿嘧啶、胞嘧啶和胸腺嘧啶、5-尿嘧啶(假尿嘧啶)、4-硫尿嘧啶、8-鹵素、8-氨基、8-硫醇、8-硫烷基、8-羥基和其他8-取代的腺嘌呤和鳥嘌呤、5-鹵素(特別是5-溴)、5-三氟甲基以及其他5-取代的尿嘧啶和胞嘧啶、7-甲基鳥嘌呤和7-甲基腺嘌呤、8-氮雜鳥嘌呤和8-氮雜腺嘌呤、7-脫氮鳥嘌呤和7-脫氮腺嘌呤以及3-脫氮鳥嘌呤和3-脫氮腺嘌呤。本領域已知可包含在本發明的PD-L1 dsRNA藥劑的某些實施方案中的其他核鹼基,參見例如:Modified Nucleosides in Biochemistry, Biotechnology and Medicine, Herdewijn, P. Ed. Wiley-VCH, 2008; The Concise Encyclopedia Of Polymer Science And Engineering, pages 858-859, Kroschwitz, J. L, Ed. John Wiley & Sons, 1990, English et al., Angewandte Chemie, International Edition, 1991, 30, 613, Sanghvi, Y S., Chapter 15, dsRNA Research and Applications, pages 289-302, Crooke, S. T. and Lebleu, B., Ed., CRC Press, 1993。製備包含核鹼基修飾和/或取代(例如本文描述的那些)的dsRNA、PD-L1反義鏈多核苷酸和/或PD-L1有義鏈多核苷酸的方法在本領域中是常規實踐的,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA劑、PD-L1有義多核苷酸和/或PD-L1反義多核苷酸。In certain embodiments, the PD-L1 dsRNA agent, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide may include nucleobase (commonly referred to as "base" in the art) modification or substitution. As used herein, "unmodified" or "natural" nucleobases include the purine bases adenine and guanine, and the pyrimidine bases thymine, cytosine and uracil. Modified nucleobases include other synthetic and natural nucleobases such as 5-methylcytosine (5-Me-C), 5-hydroxymethylcytosine, xanthine, hypoxanthine, 2-aminoadenine, 6-methyl and other alkyl derivatives of adenine and guanine, 2-propyl and other alkyl derivatives of adenine and guanine, 2-thiouracil, 2-thiothymine and 2-thiocytosine, 5-halogenuracil and cytosine, 5-propargyluracil and cytosine, 6-azouracil, cytosine and thymine. adenine, 5-uracil (pseudouracil), 4-thiouracil, 8-halogen, 8-amino, 8-thiol, 8-sulfanyl, 8-hydroxy and other 8-substituted adenines and guanines, 5-halogen (especially 5-bromo), 5-trifluoromethyl and other 5-substituted uracils and cytosines, 7-methylguanine and 7-methyladenine, 8-azaguanine and 8-azaadenine, 7-deazaguanine and 7-deazaadenine and 3-deazaguanine and 3-deazaadenine. Other nucleobases that may be included in certain embodiments of the PD-L1 dsRNA agents of the present invention are known in the art, see, for example: Modified Nucleosides in Biochemistry, Biotechnology and Medicine, Herdewijn, P. Ed. Wiley-VCH, 2008; The Concise Encyclopedia Of Polymer Science And Engineering, pages 858-859, Kroschwitz, J. L, Ed. John Wiley & Sons, 1990, English et al., Angewandte Chemie, International Edition, 1991, 30, 613, Sanghvi, Y S., Chapter 15, dsRNA Research and Applications, pages 289-302, Crooke, S. T. and Lebleu, B., Ed., CRC Press, 1993. Methods for preparing dsRNA, PD-L1 antisense polynucleotides and/or PD-L1 sense polynucleotides comprising nucleobase modifications and/or substitutions (such as those described herein) are routinely practiced in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents, PD-L1 sense polynucleotides and/or PD-L1 antisense polynucleotides of the present invention.
本發明的PD-L1 dsRNA藥劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的某些實施方案包括經修飾以包含一個或多個鎖定核酸(LNA)的RNA。鎖定核酸是具有經修飾的核糖部分的核苷酸,該部分包含連接2'和4'碳的額外橋。該結構有效地將核糖“鎖定”在3'-內結構構象中。在本發明的PD-L1 dsRNA劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸中添加鎖定核酸可增加血清中的穩定性,並減少脫靶效應(Elmen, J. 等人,(2005) Nucleic Acids Research 33(1):439-447;Mook, O R. 等人,(2007)Mol Canc Ther 6(3):833-843;Grunweller, A. 等人,(2003) Nucleic Acids Research 31(12):3185-3193)。製備包含鎖定核酸的 dsRNA劑、 PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的PD-L1 dsRNA劑。Certain embodiments of the PD-L1 dsRNA agents, PD-L1 antisense polynucleotides, and/or PD-L1 sense polynucleotides of the present invention include RNA modified to include one or more locking nucleic acids (LNAs). Locking nucleic acids are nucleotides with a modified ribose moiety that includes an additional bridge connecting the 2' and 4' carbons. This structure effectively "locks" the ribose in a 3'-endo conformation. Adding a locking nucleic acid to the PD-L1 dsRNA agent, PD-L1 antisense polynucleotide and/or PD-L1 sense polynucleotide of the present invention can increase stability in serum and reduce off-target effects (Elmen, J. et al., (2005) Nucleic Acids Research 33(1):439-447; Mook, O R. et al., (2007) Mol Canc Ther 6(3):833-843; Grunweller, A. et al., (2003) Nucleic Acids Research 31(12):3185-3193). Methods for preparing dsRNA agents comprising a locking nucleic acid, PD-L1 antisense polynucleotides and/or PD-L1 sense polynucleotides are routinely practiced in the art, and such methods can be used to prepare certain modified PD-L1 dsRNA agents of the present invention.
本發明的PD-L1 dsRNA化合物、有義多核苷酸和/或反義多核苷酸的某些實施方案包括至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包括:2'-O-甲基核苷酸、2'-氟核苷酸、2'-脫氧核苷酸、2'3'- seco核苷酸模擬物、鎖定核苷酸、2'-F-阿拉伯糖核苷酸、2'-甲氧基乙基核苷酸、2'-氨基修飾的核苷酸、2'-烷基修飾的核苷酸、嗎啉代核苷酸和3'-OMe核苷酸、包含5'-硫代磷酸酯基團的核苷酸、或與膽固醇衍生物或十二烷酸雙癸醯胺基團連接的末端核苷酸、2'-氨基修飾的核苷酸、氨基磷酸酯或包含非天然鹼基的核苷酸。在某些實施方案中,PD-L1 dsRNA化合物在反義鏈的 5’端包含E-乙烯基膦酸酯核苷酸,在本文中也稱為引導鏈。Certain embodiments of the PD-L1 dsRNA compounds, sense polynucleotides and/or antisense polynucleotides of the present invention comprise at least one modified nucleotide, wherein the at least one modified nucleotide comprises: 2'-O-methyl nucleotides, 2'-fluoro nucleotides, 2'-deoxy nucleotides, 2'3'-seco nucleotide mimetics, locked nucleotides, 2'-F-arabinose nucleotides, 2'-methoxyethyl nucleotides, 2'-amino modified nucleotides, 2'-alkyl modified nucleotides, morpholino nucleotides and 3'-OMe nucleotides, nucleotides comprising a 5'-phosphorothioate group, or a terminal nucleotide linked to a cholesterol derivative or dodecanoic acid bisdecylamide group, 2'-amino modified nucleotides, phosphoramidates, or nucleotides comprising an unnatural base. In certain embodiments, the PD-L1 dsRNA compound comprises an E-vinylphosphonate nucleotide at the 5' end of the antisense strand, also referred to herein as the guide strand.
本發明的PD-L1 dsRNA化合物、有義多核苷酸的3'和5'端和/或反義多核苷酸的3'端的某些實施方案包括至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包括:脫鹼基核苷酸、核糖醇、反向核苷酸、反向脫鹼基核苷酸、反向2'-OMe核苷酸、反向2'-脫氧核苷酸。本領域技術人員已知,在寡核苷酸末端包括脫鹼基或反向脫鹼基核苷酸可增強穩定性(Czauderna et al. Structural variations and stabilizing modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res. 2003;31(11):2705-2716. doi:10.1093/nar/gkg393)。在某些實施方案中, PD-L1 dsRNA化合物在3'端或5'端,或3'端和5'端均包含一個或多個反向脫鹼基殘基(invab)。示例性的反向脫鹼基殘基(invab)包括但不限於以下: Certain embodiments of the PD-L1 dsRNA compounds, the 3' and 5' ends of the sense polynucleotides and/or the 3' end of the antisense polynucleotides of the present invention include at least one modified nucleotide, wherein the at least one modified nucleotide includes: a debasic nucleotide, ribitol, inverted nucleotide, inverted debasic nucleotide, inverted 2'-OMe nucleotide, inverted 2'-deoxynucleotide. It is known to those skilled in the art that including debasic or inverted debasic nucleotides at the end of an oligonucleotide can enhance stability (Czauderna et al. Structural variations and stabilizing modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res. 2003;31(11):2705-2716. doi:10.1093/nar/gkg393). In certain embodiments, the PD-L1 dsRNA compound comprises one or more inverted debasing residues (invab) at the 3' end or the 5' end, or at both the 3' end and the 5' end. Exemplary inverted debasing residues (invab) include, but are not limited to, the following:
本發明的PD-L1 dsRNA化合物、有義多核苷酸的3'和5'端和/或反義多核苷酸的3'端的某些實施方案包括至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包括:異甘露醇核苷酸或所述異甘露醇核苷酸的立體異構體。異甘露醇核苷酸或所述異甘露醇核苷酸的立體異構體的具體實例包括但不限於: 、 、 、 、 、 、 、 、 、 、 和 ,其中短語“ Olig”各自獨立地表示多核苷酸部分。示例性的異甘露醇殘基(imann)包括但不限於以下: 或者 。 Certain embodiments of the PD-L1 dsRNA compounds, the 3' and 5' ends of the sense polynucleotides and/or the 3' end of the antisense polynucleotides of the present invention include at least one modified nucleotide, wherein the at least one modified nucleotide includes: isomannitol nucleotides or stereoisomers of the isomannitol nucleotides. Specific examples of isomannitol nucleotides or stereoisomers of the isomannitol nucleotides include but are not limited to: , , , , , , , , , , and , wherein the phrase "Olig" each independently represents a polynucleotide portion. Exemplary isomannide residues (imann) include, but are not limited to, the following: or .
在某些實施方案中,異甘露醇核苷酸可以進一步綴合至一個或多個靶向基團或遞送分子,例如GalNAc部分。In certain embodiments, the isomannitol nucleotides can be further conjugated to one or more targeting groups or delivery molecules, such as a GalNAc moiety.
本發明的PD-L1 dsRNA化合物、反義多核苷酸的某些實施方案包括至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包括解鎖的核酸核苷酸(UNA)或/和乙二醇核酸核苷酸(GNA)。本領域技術人員已知,UNA和GNA是熱不穩定的化學修飾,可以顯著改善siRNA化合物的脫靶特性(Janas, et al., Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity. Nat Commun. 2018;9(1):723. doi:10.1038/s41467-018-02989-4; Laursen et al., Utilization of unlocked nucleic acid (UNA) to enhance siRNA performance in vitro and in vivo. Mol BioSyst. 2010;6:862–70)。Certain embodiments of the PD-L1 dsRNA compounds and antisense polynucleotides of the present invention include at least one modified nucleotide, wherein the at least one modified nucleotide includes an unlocked nucleic acid nucleotide (UNA) or/and a glycol nucleic acid nucleotide (GNA). It is known to those skilled in the art that UNA and GNA are thermally unstable chemical modifications that can significantly improve the off-target properties of siRNA compounds (Janas, et al., Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity. Nat Commun. 2018;9(1):723. doi:10.1038/s41467-018-02989-4; Laursen et al., Utilization of unlocked nucleic acid (UNA) to enhance siRNA performance in vitro and in vivo. Mol BioSyst. 2010;6:862–70).
本發明的PD-L1 dsRNA藥劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的某些實施方案的RNA中可能包含另一種修飾,其包括與RNA化學連接的一種或多種配體、部分(moieties)或綴合物,所述配體、部分(moieties)或綴合物分別增強PD-L1 dsRNA藥劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的一種或多種特性。可增強的特性的非限制性示例為:PD-L1 dsRNA藥劑、PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的活性、細胞分佈、PD-L1 dsRNA藥劑的遞送、PD-L1 dsRNA藥劑的藥代動力學特性以及PD-L1 dsRNA藥劑的細胞攝取。在本發明的一些實施方案中,PD-L1 dsRNA劑包含一個或多個靶向基團或連接基團,在本發明的PD-L1 dsRNA劑的某些實施方案中,所述靶向基團或連接基團與有義鏈結合。靶向基團的非限制性實例是包含N-乙醯半乳糖胺(GalNAc)的化合物。術語“靶向基團”、“靶向劑”、“連接劑”、“靶向化合物”、“遞送分子”、“遞送化合物”和“靶向配體”可在本文中互換使用。在本發明的某些實施方案中, PD-L1 dsRNA劑包含與有義鏈 5' 末端結合的靶向化合物。在本發明的某些實施方案中, PD-L1 dsRNA劑包含與有義鏈 3' 末端結合的靶向化合物。在本發明的一些實施方案中, PD-L1 dsRNA劑包含包含 GalNAc 的靶向基團。在本發明的某些實施方案中, PD-L1 dsRNA藥劑不包括與有義鏈的 3' 末端和 5' 末端之一或兩者結合的靶向化合物。在本發明的某些實施方案中,PD-L1 dsRNA藥劑不包括與有義鏈的5'末端和3'末端之一或兩者結合的含GalNAc靶向化合物。Certain embodiments of the PD-L1 dsRNA agents, PD-L1 antisense polynucleotides and/or PD-L1 sense polynucleotides of the present invention may comprise another modification in the RNA, which includes one or more ligands, moieties or conjugates chemically linked to the RNA, wherein the ligands, moieties or conjugates enhance one or more properties of the PD-L1 dsRNA agents, PD-L1 antisense polynucleotides and/or PD-L1 sense polynucleotides, respectively. Non-limiting examples of properties that can be enhanced are: activity of PD-L1 dsRNA agents, PD-L1 antisense polynucleotides and/or PD-L1 sense polynucleotides, cellular distribution, delivery of PD-L1 dsRNA agents, pharmacokinetic properties of PD-L1 dsRNA agents, and cellular uptake of PD-L1 dsRNA agents. In some embodiments of the present invention, the PD-L1 dsRNA agent comprises one or more targeting groups or linking groups, and in certain embodiments of the PD-L1 dsRNA agent of the present invention, the targeting group or linking group is bound to the sense chain. A non-limiting example of a targeting group is a compound comprising N-acetylgalactosamine (GalNAc). The terms "targeting group", "targeting agent", "linker", "targeting compound", "delivery molecule", "delivery compound" and "targeting ligand" are used interchangeably herein. In certain embodiments of the present invention, the PD-L1 dsRNA agent comprises a targeting compound bound to the 5' end of the sense chain. In certain embodiments of the present invention, the PD-L1 dsRNA agent comprises a targeting compound bound to the 3' end of the sense chain. In certain embodiments of the present invention, the PD-L1 dsRNA agent comprises a targeting group comprising GalNAc. In certain embodiments of the present invention, the PD-L1 dsRNA agent does not include a targeting compound bound to one or both of the 3' end and the 5' end of the sense chain. In certain embodiments of the invention, the PD-L1 dsRNA agent does not include a GalNAc-containing targeting compound bound to one or both of the 5' end and the 3' end of the sense strand.
另外的靶向劑和連接劑是本領域所熟知的,例如,可用於本發明的某些實施方案的靶向劑和連接劑包括但不限於脂質部分。例如膽固醇部分(Letsinger et al., Proc. Natl. Acid. Sci. USA, 1989, 86: 6553-6556)、膽酸((Manoharan et al., Biorg. Med. Chem. Let., 1994, 4:1053-1060)、硫醚,例如beryl-S-三苯甲基硫醇(Manoharan et al., Ann. N.Y. Acad. Sci., 1992, 660:306-309; Manoharan et al., Biorg. Med. Chem. Let., 1993, 3:2765-2770),硫代膽固醇(Oberhauser et al., Nucl. Acids Res., 1992, 20:533-538),脂肪族鏈,例如十二烷二醇或十一烷基殘基(Saison-Behmoaras et al., EMBO J, 1991, 10:1111-1118; Kabanov et al., FEBS Lett., 1990, 259:327-330; Svinarchuk et al., Biochimie, 1993, 75:49-54),磷脂,例如二-十六烷基-rac-甘油或三乙基銨1,2-二-O-十六烷基-rac-甘油-3-膦酸酯(Manoharan et al.、Tetrahedron Lett.、1995、36:3651-3654;Shea et al.、Nucl. Acids Res.、1990、18:3777-3783), 多胺或聚乙二醇鏈(Manoharan et al.、Nucleosides & Nucleotides、1995、14:969-973);或金剛烷乙酸(Manoharan et al.、Tetrahedron Lett.、1995、36:3651-3654);棕櫚基部分(Mishra et al.、Biochim. Biophys. Acta、1995、1264:229-237);或者十八胺或己基氨基-羰基氧基膽固醇部分(Crooke et al.、J. Pharmacol. Exp. Ther.、1996、277:923-937)。Additional targeting agents and linking agents are well known in the art, for example, targeting agents and linking agents that can be used in certain embodiments of the present invention include but are not limited to lipid moieties. For example, the cholesterol moiety (Letsinger et al., Proc. Natl. Acid. Sci. USA, 1989, 86: 6553-6556), cholic acid (Manoharan et al., Biorg. Med. Chem. Let., 1994, 4: 1053-1060), thioethers, such as beryl-S-tritylthiol (Manoharan et al., Ann. N.Y. Acad. Sci., 1992, 660: 306-309; Manoharan et al., Biorg. Med. Chem. Let., 1993, 3: 2765-2770), thiocholesterol (Oberhauser et al., Nucl. Acids Res., 1992, 20:533-538), an aliphatic chain, for example dodecanediol or an undecyl residue (Saison-Behmoaras et al., EMBO J, 1991, 10:1111-1118; Kabanov et al., FEBS Lett., 1990, 259:327-330; Svinarchuk et al., Biochimie, 1993, 75:49-54), a phospholipid, for example di-hexadecyl-rac-glycerol or triethylammonium 1,2-di-O-hexadecyl-rac-glycerol-3-phosphonate (Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654; Shea et al., Nucl. Acids Res., 1990, 18:3777-3783), polyamine or polyethylene glycol chain (Manoharan et al., Nucleosides & Nucleotides, 1995, 14:969-973); or adamantane acetic acid (Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654); palmityl moiety (Mishra et al., Biochim. Biophys. Acta, 1995, 1264:229-237); or octadecylamine or hexylamino-carbonyloxycholesterol moiety (Crooke et al., J. Pharmacol. Exp. Ther., 1996, 277:923-937).
包含PD-L1 dsRNA藥劑、 PD-L1反義多核苷酸和/或PD-L1有義多核苷酸的組合物的某些實施方案可包含改變PD-L1 dsRNA藥劑的分佈、靶向等的配體。在包含本發明的PD-L1 dsRNA藥劑的組合物的一些實施方案中,與不存在此類配體的物種相比,配體增加對選定靶標(例如分子、細胞或細胞類型、區室,例如細胞或器官區室、組織、器官或身體區域)的親和力。可用於本發明的組合物和/或方法的配體可以是天然存在的物質,例如蛋白質(例如人血清白蛋白(HSA)、低密度脂蛋白(LDL)或球蛋白);碳水化合物(例如葡聚糖、普魯蘭多糖、幾丁質、殼聚糖、菊粉、環糊精或透明質酸);或脂質。配體也可以是重組或合成分子,例如合成聚合物,例如合成聚氨基酸或聚胺。聚氨基酸的例子是聚賴氨酸(PLL)、聚L-天冬氨酸、聚L-谷氨酸、苯乙烯-馬來酸酐共聚物、聚(L-丙交酯-共-乙醇酸)共聚物、二乙烯基醚-馬來酸酐共聚物、N-(2-羥丙基)甲基丙烯醯胺共聚物(HMPA)、聚乙二醇(PEG)、聚乙烯醇(PVA)、聚氨酯、聚(2-乙基丙烯酸)、N-異丙基丙烯醯胺聚合物或聚磷嗪。多胺的例子包括:聚乙烯亞胺、聚賴氨酸(PLL)、精胺、亞精胺、多胺、假肽多胺、肽模擬物多胺、樹枝狀多胺、精氨酸、脒、魚精蛋白、陽離子脂質、陽離子卟啉、多胺的季鹽或α螺旋肽。Certain embodiments of compositions comprising PD-L1 dsRNA agents, PD-L1 antisense polynucleotides, and/or PD-L1 sense polynucleotides may comprise a ligand that alters the distribution, targeting, etc. of the PD-L1 dsRNA agent. In some embodiments of compositions comprising the PD-L1 dsRNA agents of the invention, the ligand increases affinity for a selected target (e.g., a molecule, a cell or cell type, a compartment, such as a cell or organ compartment, a tissue, an organ, or a body region) compared to a species in which such ligand is absent. Ligands useful in the compositions and/or methods of the invention may be naturally occurring substances, such as proteins (e.g., human serum albumin (HSA), low-density lipoprotein (LDL), or globulins); carbohydrates (e.g., dextran, pullulan, chitin, chitosan, inulin, cyclodextrin, or hyaluronic acid); or lipids. Ligands may also be recombinant or synthetic molecules, such as synthetic polymers, such as synthetic polyamino acids or polyamines. Examples of polyamino acids are polylysine (PLL), poly-L-aspartic acid, poly-L-glutamic acid, styrene-maleic anhydride copolymers, poly(L-lactide-co-glycolic acid) copolymers, divinyl ether-maleic anhydride copolymers, N-(2-hydroxypropyl)methacrylamide copolymers (HMPA), polyethylene glycol (PEG), polyvinyl alcohol (PVA), polyurethanes, poly(2-ethylacrylic acid), N-isopropylacrylamide polymers, or polyphosphazenes. Examples of polyamines include polyethyleneimine, polylysine (PLL), spermine, spermidine, polyamines, pseudopeptide polyamines, peptidomimetic polyamines, dendrimer polyamines, arginine, amidine, protamine, cationic lipids, cationic porphyrins, quaternary salts of polyamines, or alpha helical peptides.
本發明的組合物和/或方法中包含的配體可以包含靶向基團,其非限制性實例是細胞或組織靶向劑,例如凝集素、糖蛋白、脂質或蛋白質,例如與特定細胞類型(例如腎細胞或肝細胞)結合的抗體。靶向基團可以是促甲狀腺激素、促黑素、凝集素、糖蛋白、表面活性蛋白A、黏蛋白碳水化合物、多價乳糖、多價半乳糖、N-乙醯半乳糖胺、N-乙醯葡糖胺多價甘露糖、多價岩藻糖、糖基化聚氨基酸、多價半乳糖、轉鐵蛋白、雙膦酸鹽、聚谷氨酸、聚天冬氨酸、脂質、膽固醇、類固醇、膽汁酸、葉酸、維生素B12、維生素A、生物素或RGD肽或RGD肽模擬物。The ligands included in the compositions and/or methods of the invention may comprise a targeting group, non-limiting examples of which are cell or tissue targeting agents, such as lectins, glycoproteins, lipids, or proteins, such as antibodies that bind to specific cell types (e.g., kidney cells or liver cells). The targeting group can be thyroid stimulating hormone, melanocyte stimulating hormone, lectin, glycoprotein, surfactant protein A, mucin carbohydrate, polyvalent lactose, polyvalent galactose, N-acetylgalactosamine, N-acetyl glucosamine polyvalent mannose, polyvalent fucose, glycosylated polyamino acid, polyvalent galactose, transferrin, bisphosphonate, polyglutamic acid, polyaspartic acid, lipid, cholesterol, steroid, bile acid, folic acid, vitamin B12, vitamin A, biotin or RGD peptide or RGD peptide mimetic.
配體的其他實例包括染料、嵌入劑(例如吖啶)、交聯劑(例如補骨脂素、絲裂黴素C)、卟啉(TPPC4、特克薩菲林、薩菲林)、多環芳烴(例如吩嗪、二氫吩嗪)、人工核酸內切酶(例如EDTA)、親脂性分子(例如膽固醇、膽酸、金剛烷乙酸、1-芘丁酸、雙氫睾酮、1,3-雙-O(十六烷基)甘油、香葉氧己基、十六烷基甘油、冰片、薄荷醇、1,3-丙二醇、十七烷基、棕櫚酸、肉豆蔻酸、O3-(油醯基)石膽酸、O3-(油醯基)膽烯酸、二甲氧基三苯甲基或吩惡嗪)和肽綴合物(例如,觸角足肽、Tat肽)、烷化劑、磷酸鹽、氨基、巰基、PEG(例如,PEG-40K)、MPEG、[MPEG] 2、聚氨基、烷基、取代的烷基、放射性標記物、酶、半抗原(例如,生物素)、轉運/吸收促進劑(例如,阿司匹林、維生素E、葉酸)、合成核糖核酸酶(例如,咪唑、雙咪唑、組胺、咪唑簇、吖啶-咪唑綴合物、四氮雜大環的Eu3+複合物)、二硝基苯基、HRP或AP。 Other examples of ligands include dyes, intercalators (e.g., acridine), crosslinkers (e.g., psoralen, mitomycin C), porphyrins (TPPC4, texaphylline, saphthrin), polycyclic aromatic hydrocarbons (e.g., phenazine, dihydrophenazine), artificial endonucleases (e.g., EDTA), lipophilic molecules (e.g., cholesterol, bile acid, adamantaneacetic acid, 1-pyrenebutyric acid, dihydrotestosterone, 1,3-bis-O(hexadecyl)glycerol, Geranyloxyhexyl, hexadecylglycerol, borneol, menthol, 1,3-propylene glycol, heptadecyl, palmitic acid, myristic acid, O3-(oleyl)cholestyric acid, O3-(oleyl)cholestyric acid, dimethoxytrityl or phenoxazine) and peptide conjugates (e.g., tripeptide, Tat peptide), alkylating agents, phosphates, amino, hydroxyl, PEG (e.g., PEG-40K), MPEG, [MPEG] 2. Polyamino, alkyl, substituted alkyl, radiolabel, enzyme, hapten (e.g., biotin), transport/absorption enhancer (e.g., aspirin, vitamin E, folic acid), synthetic ribonuclease (e.g., imidazole, bisimidazole, histamine, imidazole cluster, acridine-imidazole conjugate, tetrazamacrocyclic Eu3+ complex), dinitrophenyl, HRP or AP.
本發明的組合物和/或方法中包含的配體可以是蛋白質,例如糖蛋白或肽,例如對輔助配體具有特定親和力的分子,或抗體,例如與特定細胞類型(例如癌細胞、內皮細胞、心臟細胞或骨細胞)結合的抗體。在本發明的組合物和/或方法的實施例中有用的配體可以是激素或激素受體。在本發明的組合物和/或方法的實施例中有用的配體可以是脂質、凝集素、碳水化合物、維生素、輔因子、多價乳糖、多價半乳糖、N-乙醯半乳糖胺、N-乙醯葡糖胺多價甘露糖或多價岩藻糖。在本發明的組合物和/或方法的實施方案中有用的配體可以是能夠增加PD-L1 dsRNA藥劑進入細胞的物質,例如,通過破壞細胞的細胞骨架,例如,通過破壞細胞的微管、微絲和/或中間絲。這種藥劑的非限制性例子是:taxon、長春新鹼、長春花鹼、細胞鬆弛素、nocodazole、japlakinolide、latrunculin A、phalloidin、swinholide A、indanocine和myoservin。The ligand included in the compositions and/or methods of the present invention can be a protein, such as a glycoprotein or a peptide, such as a molecule with a specific affinity for a co-ligand, or an antibody, such as an antibody that binds to a specific cell type (e.g., cancer cells, endothelial cells, heart cells, or bone cells). The ligand useful in embodiments of the compositions and/or methods of the present invention can be a hormone or a hormone receptor. The ligand useful in embodiments of the compositions and/or methods of the present invention can be a lipid, a lectin, a carbohydrate, a vitamin, a cofactor, a multivalent lactose, a multivalent galactose, N-acetylgalactosamine, N-acetylglucosamine, a multivalent mannose, or a multivalent fucose. Ligands useful in embodiments of the compositions and/or methods of the invention can be substances that increase the entry of a PD-L1 dsRNA agent into a cell, for example, by disrupting the cell's cytoskeleton, for example, by disrupting the cell's microtubules, microfilaments and/or intermediate filaments. Non-limiting examples of such agents are: taxon, vincristine, vinblastine, cytorelaxin, nocodazole, japlakinolide, latrunculin A, phalloidin, swinholide A, indanocine, and myoservin.
在一些實施方案中,連接至本發明的PD-L1 dsRNA藥劑的配體充當藥代動力學 (PK) 調節劑。可用於本發明的組合物和方法的PK調節劑的例子包括但不限於:親脂性物質、膽汁酸、類固醇、磷脂類似物、肽、蛋白質結合劑、PEG、維生素、膽固醇、脂肪酸、膽酸、石膽酸、二烷基甘油酯、二醯基甘油酯、磷脂、鞘脂、萘普生、布洛芬、維生素E、生物素、結合血清蛋白的適體等。含有大量硫代磷酸酯鍵的寡核苷酸還已知能與血清蛋白結合,因此主鏈中包含多個硫代磷酸酯鍵的短寡核苷酸(例如約5個鹼基、10個鹼基、15個鹼基或20個鹼基的寡核苷酸)也可用作本發明的組合物和/或方法中的配體。 PD-L1 dsRNA 藥物組合物 In some embodiments, the ligand linked to the PD-L1 dsRNA agent of the present invention acts as a pharmacokinetic (PK) modulator. Examples of PK modulators that can be used in the compositions and methods of the present invention include, but are not limited to, lipophilic substances, bile acid, steroids, phospholipid analogs, peptides, protein binders, PEG, vitamins, cholesterol, fatty acids, bile acid, cholestyric acid, dialkylglycerides, diacylglycerides, phospholipids, sphingolipids, naproxen, ibuprofen, vitamin E, biotin, serum protein-binding aptamers, etc. Oligonucleotides containing a large number of phosphorothioate bonds are also known to bind to serum proteins, so short oligonucleotides containing multiple phosphorothioate bonds in the backbone (e.g., oligonucleotides of about 5 bases, 10 bases, 15 bases, or 20 bases) can also be used as ligands in the compositions and/or methods of the present invention. PD-L1 dsRNA Drug Compositions
在本發明的一些實施方案中,PD-L1 dsRNA藥劑存在於組合物中。本發明的組合物可以包括一種或多種PD-L1 dsRNA藥劑,以及可選的一種或多種藥學上可接受的載體、遞送劑、靶向劑、可檢測標記等。根據本發明方法的一些實施方案可能有用的靶向劑的非限制性實例是將本發明的PD-L1 dsRNA藥劑引導至待治療的細胞和/或進入待治療的細胞的藥劑。靶向劑的選擇將取決於以下因素: PD-L1相關疾病或病症的性質,以及所靶向的細胞類型。在非限制性實例中,在本發明的一些實施方案中,可能希望將PD-L1 dsRNA藥劑引導至肝細胞和/或進入肝細胞。應理解,在本發明方法的一些實施方案中,治療劑包括僅具有遞送劑的PD-L1 dsRNA劑,例如包含N-乙醯半乳糖胺 (GalNAc)的遞送劑,而沒有任何附加元素。例如,在本發明的一些方面,PD-L1 dsRNA劑可以附著於包含GalNAc的遞送化合物,並包含在包含藥學上可接受的載體的組合物中,並且在不附著任何可檢測標記或靶向劑等的情況下施用於細胞或受試者。In some embodiments of the invention, the PD-L1 dsRNA agent is present in a composition. The composition of the invention may include one or more PD-L1 dsRNA agents, and optionally one or more pharmaceutically acceptable carriers, delivery agents, targeting agents, detectable markers, etc. Non-limiting examples of targeting agents that may be useful according to some embodiments of the methods of the invention are agents that direct the PD-L1 dsRNA agent of the invention to the cells to be treated and/or into the cells to be treated. The choice of targeting agent will depend on the following factors: the nature of the PD-L1-related disease or condition, and the type of cell being targeted. In a non-limiting example, in some embodiments of the invention, it may be desirable to direct a PD-L1 dsRNA agent to and/or into hepatocytes. It should be understood that in some embodiments of the methods of the invention, the therapeutic agent includes a PD-L1 dsRNA agent with only a delivery agent, such as a delivery agent comprising N-acetylgalactosamine (GalNAc), without any additional elements. For example, in some aspects of the invention, a PD-L1 dsRNA agent can be attached to a delivery compound comprising GalNAc and contained in a composition comprising a pharmaceutically acceptable carrier and administered to a cell or subject without any detectable label or targeting agent attached thereto or the like.
當本發明的PD-L1 dsRNA藥劑與一種或多種遞送劑、靶向劑、標記劑等一起施用和/或附著於一種或多種遞送劑、靶向劑、標記劑等時,本領域技術人員將瞭解並能夠選擇和使用適合於本發明方法的藥劑。標記劑可用於本發明的某些方法中以確定PD-L1 dsRNA藥劑在細胞和組織中的位置,並且可用於確定包含已在本發明方法中施用的PD-L1 dsRNA藥劑的治療組合物的細胞、組織或器官位置。用於連接和利用標記試劑例如酶標記、染料、放射性標記等的手段是本領域眾所周知的。應當理解,在本發明的組合物和方法的一些實施方案中,標記劑附著於 PD -L1 dsRNA藥劑中包含的有義多核苷酸和反義多核苷酸中的一個或兩個。 PD-L1 dsRNA 藥物和 PD-L1 反義多核苷酸藥物的遞送 When the PD-L1 dsRNA agent of the present invention is administered together with and/or attached to one or more delivery agents, targeting agents, labeling agents, etc., a person skilled in the art will understand and be able to select and use agents suitable for the methods of the present invention. Labeling agents can be used in certain methods of the present invention to determine the location of PD-L1 dsRNA agents in cells and tissues, and can be used to determine the cell, tissue or organ location of a therapeutic composition containing a PD-L1 dsRNA agent that has been administered in the methods of the present invention. Means for attaching and utilizing labeling agents such as enzyme labels, dyes, radioactive labels, etc. are well known in the art. It should be understood that in some embodiments of the compositions and methods of the present invention, the labeling agent is attached to one or both of the sense polynucleotide and the antisense polynucleotide contained in the PD-L1 dsRNA agent. Delivery of PD-L1 dsRNA Agents and PD-L1 Antisense Polynucleotide Agents
本發明方法的某些實施方案包括將PD-L1 dsRNA藥劑遞送至細胞中。本文所用的術語“遞送”是指促進或影響細胞的攝取或吸收。PD-L1 dsRNA藥劑的吸收或攝取可通過獨立的擴散或活化細胞過程,或通過使用可與本發明的PD-L1 dsRNA藥劑相關的遞送劑、靶向劑等發生。適用於本發明方法的遞送方式包括但不限於: 體內遞送,其中將PD-L1 dsRNA藥劑注射至組織部位或全身施用。在本發明的一些實施方案中,PD-L1 dsRNA藥劑附著至遞送劑。 Certain embodiments of the methods of the present invention include delivering a PD-L1 dsRNA agent to a cell. The term "delivery" as used herein refers to promoting or affecting the uptake or absorption of a cell. The absorption or uptake of a PD-L1 dsRNA agent may occur through an independent diffusion or activation cell process, or through the use of a delivery agent, a targeting agent, etc. that may be associated with the PD-L1 dsRNA agent of the present invention. Delivery methods suitable for the methods of the present invention include, but are not limited to: in vivo delivery, in which the PD-L1 dsRNA agent is injected into a tissue site or administered systemically. In some embodiments of the present invention, the PD-L1 dsRNA agent is attached to a delivery agent.
可用於將PD-L1 dsRNA藥劑遞送至細胞、組織和/或受試者的方法的非限制性實例包括:PD-L1 dsRNA-GalNAc綴合物、SAMiRNA技術、基於LNP的遞送方法和裸RNA遞送。這些和其他遞送方法已在本領域中成功用於遞送治療性RNAi藥劑以治療各種疾病和病症,例如但不限於:肝病、急性間歇性紫質症(AIP)、血友病、肺纖維化等。各種遞送方法的詳情可參見以下出版物:Nikam, R.R. & K. R. Gore (2018) Nucleic Acid Ther, 28 (4), 209-224 Aug 2018; Springer A.D. & S.F. Dowdy (2018) Nucleic Acid Ther. Jun 1; 28(3): 109–118; Lee, K. et al., (2018) Arch Pharm Res, 41(9), 867-874; and Nair, J.K. et al., (2014) J. Am. Chem. Soc. 136:16958-16961,其內容均通過引用併入本文中。Non-limiting examples of methods that can be used to deliver PD-L1 dsRNA agents to cells, tissues, and/or subjects include: PD-L1 dsRNA-GalNAc conjugates, SAMiRNA technology, LNP-based delivery methods, and naked RNA delivery. These and other delivery methods have been successfully used in the art to deliver therapeutic RNAi agents to treat various diseases and conditions, such as, but not limited to: liver disease, acute intermittent porphyria (AIP), hemophilia, pulmonary fibrosis, etc. Details of various delivery methods can be found in the following publications: Nikam, R.R. & K. R. Gore (2018) Nucleic Acid Ther, 28 (4), 209-224 Aug 2018; Springer A.D. & S.F. Dowdy (2018) Nucleic Acid Ther. Jun 1; 28(3): 109–118; Lee, K. et al., (2018) Arch Pharm Res, 41(9), 867-874; and Nair, J.K. et al., (2014) J. Am. Chem. Soc. 136:16958-16961, all of which are incorporated herein by reference.
本發明的一些實施方案包括使用脂質奈米顆粒(LNP)將本發明的PD-L1 dsRNA藥劑遞送至細胞、組織和/或受試者。LNP通常用於 體內遞送PD-L1 dsRNA藥劑,包括治療性PD-L1 dsRNA藥劑。使用 LNP 或其他遞送劑的一個好處是,當使用 LNP 或其他遞送劑將 PD-L1 RNA 藥物遞送至受試者時,其穩定性更高。在本發明的一些實施方案中,LNP包括載有一個或多個本發明的PD-L1 RNAi分子的陽離子LNP。將包含PD-L1 RNAi分子的LNP施用於受試者,LNPs及其附著的PD-L1 RNAi 分子通過內吞作用被細胞吸收,它們的存在導致 RNAi 觸發分子的釋放,從而介導 RNAi。 Some embodiments of the present invention include using lipid nanoparticles (LNPs) to deliver the PD-L1 dsRNA agents of the present invention to cells, tissues and/or subjects. LNPs are generally used to deliver PD-L1 dsRNA agents in vivo , including therapeutic PD-L1 dsRNA agents. One advantage of using LNPs or other delivery agents is that when PD-L1 RNA drugs are delivered to subjects using LNPs or other delivery agents, they are more stable. In some embodiments of the present invention, LNPs include cationic LNPs carrying one or more PD-L1 RNAi molecules of the present invention. LNPs containing PD-L1 RNAi molecules are administered to subjects. LNPs and their attached PD-L1 RNAi molecules are taken up by cells via endocytosis, and their presence leads to the release of RNAi trigger molecules, thereby mediating RNAi.
可用於本發明的實施方案中以將本發明的PD-L1 dsRNA藥劑遞送至細胞、組織和/或受試者的遞送劑的另一個非限制性實例是包含GalNAc的藥劑,其連接至本發明的PD-L1 dsRNA藥劑並將PD-L1 dsRNA藥劑遞送至細胞、組織和/或受試者。可以在本發明的方法和組合物的某些實施方案中使用的包含GalNAc的某些另外的遞送劑的實例公開於PCT申請:WO2020191183A1(其全部內容併入本文)中。 可用於本發明的組合物和方法以將PD-L1 dsRNA藥劑遞送至細胞的GalNAc靶向配體的一個非限制性實例是靶向配體簇。本文中呈現的靶向配體簇的實例稱為:具有磷酸二酯連接的GalNAc配體 (GLO) 和具有硫代磷酸酯連接的GalNAc配體 (GLS)。術語“GLX-n”可以在此用於表示所附著的含GalNAc的化合物是化合物GLS-1*、GLS-2*、GLS-3*、GLS-4*、GLS-5*、GLS-6*、GLS-7*、GLS-8*、GLS-9*、GLS-10*、GLS-11*、GLS-12*、GLS-13*、GLS-14*、GLS-15*、GLS-16*、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種,其各自的結構如下所示,其中GalNAc靶向配體與本發明的RNAi劑的連接位置為每個的最右側(用“
⸾”顯示) ,GLS-1*、GLS-2*、GLS-3*、GLS-4*、GLS-5*、GLS-6*、GLS-7*、GLS-8*、GLS-9*、GLS-10*、GLS-11*、GLS-12*、GLS-13*、GLS-14*、GLS-15*、GLS-16*、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16亞磷醯胺已公佈在WO2023/045995A1中 (全文併入本文中)。應當理解,本發明的任何RNAi和dsRNA分子均可連接至GLS-1*、GLS-2*、GLS-3*、GLS-4*、GLS-5*、GLS-6*、GLS-7*、GLS-8*、GLS-9*、GLS-10*、GLS-11*、GLS-12*、GLS-13*、GLS-14*、GLS-15*、GLS-16*、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16、GLO-1至GLO-16以及GLS-1*至GLS-16*結構如下所示。
在某些實施方案中,上述異甘露醇核苷酸可以進一步與一種或多種GalNAc靶向配體綴合。與GalNAc靶向配體綴合的異甘露醇核苷酸的具體例子包括但不限於: , ,其中短語“olig”各自獨立地代表多核苷酸部分。 In certain embodiments, the above-mentioned isomannose nucleotides can be further conjugated with one or more GalNAc targeting ligands. Specific examples of isomannose nucleotides conjugated with GalNAc targeting ligands include but are not limited to: , , wherein the phrases "olig" each independently represent a polynucleotide portion.
在本發明的一些實施方案中, 體內遞送也可以通過β-葡聚糖遞送系統進行,例如美國專利號5,032,401和5,607,677以及美國公開號2005/0281781中描述的那些,這些專利在此通過引用整體併入本文。還可以使用本領域已知的方法(例如電穿孔和脂質轉染)將PD-L1 RNAi劑體外引入細胞。在本發明方法的某些實施方案中,PD-L1 dsRNA是在沒有靶向劑的情況下遞送的。這些RNA可以作為“裸露”RNA分子遞送。作為非限制性實例,本發明的PD-L1 dsRNA可以以包含RNAi劑但不包括靶向劑(例如GalNAc靶向化合物)的藥物組合物的形式施用於受試者以治療受試者的PD-L1相關疾病或病症(例如心血管疾病)。 In some embodiments of the invention, in vivo delivery can also be performed by β-glucan delivery systems, such as those described in U.S. Patent Nos. 5,032,401 and 5,607,677 and U.S. Publication No. 2005/0281781, which are hereby incorporated by reference in their entirety. PD-L1 RNAi agents can also be introduced into cells in vitro using methods known in the art, such as electroporation and lipofection. In certain embodiments of the methods of the invention, PD-L1 dsRNA is delivered without a targeting agent. These RNAs can be delivered as "naked" RNA molecules. As a non-limiting example, the PD-L1 dsRNA of the present invention can be administered to a subject in the form of a pharmaceutical composition comprising an RNAi agent but not a targeting agent (e.g., a GalNAc targeting compound) to treat a PD-L1-related disease or disorder (e.g., cardiovascular disease) in the subject.
除了本文描述的某些遞送方法之外,應當理解,RNAi 遞送方法(例如但不限於本文描述的和本領域中使用的方法)可與本文描述的PD-L1 RNAi藥劑和治療方法的實施方案結合使用。In addition to certain delivery methods described herein, it will be appreciated that RNAi delivery methods (such as, but not limited to, those described herein and used in the art) can be used in conjunction with the embodiments of the PD-L1 RNAi agents and treatment methods described herein.
本發明的PD-L1 dsRNA藥劑可以以有效降低細胞和/或受試者中PD-L1多肽的水平和活性的量和方式施用於受試者。在本發明方法的一些實施方案中,將一種或多種PD-L1 dsRNA藥劑施用於細胞和/或受試者以治療與PD-L1表達和活性相關的疾病或病症。在某些實施方案中,本發明的方法包括將一種或多種PD-L1 dsRNA藥劑施用於需要此類治療的受試者以降低受試者中與PD-L1表達相關的疾病或病症。可以施用本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑以降低 體外、 離體和 體內細胞中的一種或多種中的PD-L1表達和/或活性。 The PD-L1 dsRNA agents of the present invention can be administered to a subject in an amount and manner effective to reduce the level and activity of PD-L1 polypeptides in cells and/or subjects. In some embodiments of the methods of the present invention, one or more PD-L1 dsRNA agents are administered to cells and/or subjects to treat diseases or conditions associated with PD-L1 expression and activity. In certain embodiments, the methods of the present invention include administering one or more PD-L1 dsRNA agents to a subject in need of such treatment to reduce a disease or condition associated with PD-L1 expression in the subject. The PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents of the present invention can be administered to reduce PD-L1 expression and/or activity in one or more of in vitro , ex vivo , and in vivo cells .
在本發明的一些實施方案中,通過將PD-L1 dsRNA劑或PD-L1反義多核苷酸劑遞送(例如引入)到細胞中來降低細胞中PD-L1多肽的水平,從而降低其活性。靶向劑和方法可用於幫助將PD-L1 dsRNA劑或PD-L1反義多核苷酸劑遞送到受試者內的特定細胞類型、細胞亞型、器官、空間區域和/或細胞內的亞細胞區域。在本發明的某些方法中,可以單獨施用PD-L1 dsRNA劑,或者與一種或多種另外的PD-L1 dsRNA劑組合施用。在某些實施方案中,向受試者施用 2、3、4 或更多種獨立選擇的PD-L1 dsRNA劑。In some embodiments of the present invention, the level of PD-L1 polypeptide in a cell is reduced by delivering (e.g., introducing) a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent into a cell, thereby reducing its activity. Targeting agents and methods can be used to help deliver PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents to specific cell types, cell subtypes, organs, spatial regions, and/or subcellular regions within cells in a subject. In certain methods of the present invention, a PD-L1 dsRNA agent can be administered alone or in combination with one or more additional PD-L1 dsRNA agents. In certain embodiments, 2, 3, 4 or more independently selected PD-L1 dsRNA agents are administered to a subject.
在本發明的某些實施方案中,將PD-L1 dsRNA藥劑與一種或多種用於治療PD-L1相關疾病或病症的另外的治療方案一起施用於受試者以治療PD-L1相關疾病或病症。另外的治療方案的非限制性示例為:施用一種或多種本發明的PD-L1反義多核苷酸、施用非PD-L1 dsRNA治療劑和行為改變。另外的治療方案可在以下一個或多個時間施用:施用本發明的PD-L1 dsRNA藥劑之前、同時和之後。應理解,本文使用的“同時”是指零點五分鐘內、零點十分鐘內、零點三十分鐘內、零點四十五分鐘內和零點六十分鐘內,“零點”是指向受試者施用本發明的PD-L1 dsRNA藥劑的時間。非PD-L1 dsRNA治療劑的非限制性例子包括:選自由手術、放射治療、化學治療、靶向治療、免疫治療或激素治療組成的其他癌症治療劑。包括但不限於阿侖單抗(alemtuzumab)、六甲蜜胺(altretamine)、阿紮胞苷(azacitidine)、苯達莫司汀(bendamustine)、博來黴素(bleomycin)、硼替佐米(bortezomib)、白消安(busulfan)、卡巴他賽(cabazitaxel)、卡培他濱(capecitabine)、卡鉑(carboplatin)、卡莫呋(carmofur)、卡莫司汀(carmustine)、苯丁酸氮芥(chlorambucil)、氯甲嗪(chlormethine)、順鉑(cisplatin)、克拉屈濱(cladribine)、氯法拉濱(clofarabine)、環磷醯胺(cyclophosphamide)、阿糖胞苷(cytarabine)、達卡巴嗪(dacarbazine)、放線菌素(dactinomycin)、柔紅黴素(daunorubicin)、地西他濱(decitabine)、地諾單抗(denosumab)、多西他賽(docetaxel)、多柔比星(doxorubicin)、表柔比星(epirubicin)、雌莫司汀(estramustine)、依託泊苷(etoposide)、依維莫司(everolimus)、氟尿苷(floxuridine)、氟達拉濱(fludarabine)、氟尿嘧啶(fluorouracil)、福莫司汀(fotemustine)、吉西他濱(gemcitabine)、吉妥珠單抗(gemtuzumab)、羥基脲(hydroxycarbamide)、伊布替莫單抗(ibritumomab)、伊達比星(idarubicin)、異環磷醯胺(ifosfamide)、伊立替康(irinotecan)、伊沙匹隆(ixabepilone)、洛莫司汀(lomustine)、美法侖(melphalan)、巰嘌呤(mercaptopurine)、甲氨蝶呤(methotrexate)、絲裂黴素(mitomycin)、米托蒽醌(mitoxantrone)、奈達鉑(nedaplatin)、奈拉濱(nelarabine)、奧法木單抗(ofatumumab)、奧沙利鉑(oxaliplatin)、紫杉醇(paclitaxel)、培美曲塞(pemetrexed)、戊司他丁(pentostatin)、帕妥珠單抗(pertuzumab)、丙卡巴肼(procarbazine)、雷替曲塞(raltitrexed)、鏈脲佐菌素(streptozotocin)、替加氟(tegafur)、替莫唑胺(temozolomide)、替西羅莫司(temsirolimus)、替尼泊苷(teniposide)、硫鳥嘌呤(tioguanine)、拓撲替康(topotecan)、托西莫單抗(tositumomab)、戊柔比星(valrubicin)、長春花鹼(vinblastine)、長春新鹼(vincristine)、長春地辛(vindesine)、長春氟寧(vinflunine)、或長春瑞濱(vinorelbine)、阿卡替尼(acalabrutinib)、阿達色替(adavosertib)、阿法替尼(afatinib)、阿來替尼(alectinib)、阿西替尼(axitinib)、比尼替尼(binimetinib)、博舒替尼(bosutinib)、布格替尼(brigatinib)、西地尼布(cediranib)、色瑞替尼(ceritinib)、西妥昔單抗(cetuximab)、考比替尼(cobimetinib)、克唑替尼(crizotinib)、卡博替尼(cabozantinib)、達克替尼(dacomitinib)、達沙替尼(dasatinib)、恩曲替尼(entrectinib)、厄達替尼(erdafitinib)、厄洛替尼(erlotinib)、福他替尼(fostamatinib)、吉非替尼(gefitinib)、依布替尼(ibrutinib)、伊馬替尼(imatinib)、拉帕替尼(lapatinib)、侖伐替尼(lenvatinib)、來他替尼(lestaurtinib)、洛他替尼(lortatinib)、馬賽替尼(masitinib)、莫米洛替尼(momelotinib)、莫布替尼(mubritinib)、來那替尼(neratinib)、尼羅替尼(nilotinib)、尼達尼布(nintedanib)、奧莫替尼(olmutinib)、奧希替尼(osimertinib)、帕克替尼(pacritinib)、帕尼單抗(panitumumab)、帕唑帕尼(pazopanib)、呱加替尼(pegaptanib)、普納替尼(ponatinib),拉多替尼(radotinib)、瑞戈非尼(regorafenib)、羅西替尼(rociletinib)、蘆可替尼(ruxolitinib)、司美替尼(selumetinib)、司馬沙尼(semaxanib)、索拉非尼(sorafenib)、舒尼替尼(sunitinib)、SU6656、替沃紮尼(tivozanib)、托塞尼布(toceranib)、曲美替尼(trametinib)、曲妥珠單抗(trastuzumab)、凡德他尼(vandetanib)或維莫非尼(vemurafenib)、納武單抗(nivolumab)、帕博利珠單抗(pembrolizumab)、斯巴達珠單抗(spartalizumab)、西米普利單抗(cemiplimab)、卡瑞利珠單抗(camrelizumab)、信迪利單抗(sintilimab)、替雷利珠單抗(tislelizumab)、特瑞普利單抗(toripalimab)、AMP-224或AMP-514、阿替利珠單抗(atezolizumab)、阿維單抗(avelumab)、度伐單抗(durvalumab)、KN035、AUNP12、CA-170或BMS-986189、伊匹單抗(ipilimumab)或曲米單抗(tremilimumab)、阿柏西普(aflibercept)、阿昔替尼(axitinib)、貝伐單抗(bevacizumab)、布立尼布(brivanib)、卡博替尼(cabozantinib)、西地尼布(cediranib)、侖伐替尼(lenvatinib)、利尼夫米布(linifmib)、尼達尼布(nintedanib)、帕唑帕尼(pazopanib)、普納替尼(ponatinib)、雷莫蘆單抗(ramucirumab)、瑞戈非尼(regorafenib)、司馬沙尼(semaxanib)、索拉非尼(sorafenib)、舒尼替尼(sunitinib)、替沃紮尼(tivozanib)、托塞尼布(toceranib)或凡德他尼(vandetanib)、AB-423、AB-506、ABI-H2158、ABI-H0731、阿昔洛韋(acyclovir)、阿達普明(adapromine)、阿德福韋(adefovir)、艾拉芬胺(alafenamide)、金剛烷胺(amantadine)、阿舒那普韋(asunaprevir)、巴洛沙韋酯(baloxavir marboxil)、貝克拉布韋(beclabuvir)、波賽普韋(boceprevir)、溴比夫定(brivudine)、西多福韋(cidofovir)、西盧普韋(ciluprevir)、克拉夫定(clevudine)、阿糖胞苷(cytarabine)、達卡他韋(daclatasvir)、達諾普韋(danoprevir)、達塞布韋(dasabuvir)、德萊布韋(deleobuvir)、阿德福韋酯(dipivoxil)、依度尿苷(edoxudine)、艾爾巴韋(elbasvir)、恩替卡韋(entecavir)、法達瑞韋(faldaprevir)、泛昔洛韋(famciclovir)、法匹拉韋(favipiravir)、非利布韋(filibuvir)、福米韋生(fomivirsen)、膦甲酸(foscamet)、加利司韋(galidesivir)、更昔洛韋(ganciclovir)、格卡瑞韋(glecaprevir)、GLS4、格拉瑞韋(grazoprevir)、碘苷(idoxuridine)、咪喹莫特(imiquimod)、IFN-a、干擾素alfa 2b、JNJ-440、JNJ-6379、拉米夫定(lamivudine)、拉尼米韋(laninamivir)、雷迪帕韋(ledipasvir)、美西他濱(mericitabine)、美替沙腙(methisazone)、MK-608、嗎啉胍(moroxydine)、那拉匹韋(narlaprevir)、NITD008、NZ-4、奧達拉韋(odalasvir)、奧比他韋(ombitasvir)、奧司他韋(oseltamivir)、帕瑞他韋(paritaprevir)、聚乙二醇干擾素α-2a、噴昔洛韋(penciclovir)、帕拉米韋(peramivir)、呱侖他韋(pibrentasvir)、吡莫地韋(pimodivir)、普可那利(pleconaril)、鬼臼毒素(podophyllotoxin)、普沙托韋(presatovir)、瑞達布韋(radalbuvir)、拉維達韋(ravidasvir)、瑞德西韋(remdesivir)、REP 2139、REP 2165、雷西莫特(resiquimod)、RG7907、利巴韋林(ribavirin)、利福平(rifampicin)、金剛乙胺(rimantadine)、盧紮司韋(ruzasvir)、沙他司韋(samatasvir)、塞曲布韋(setrobuvir)、司美匹韋(simeprevir)、索非布韋(sofosbuvir)、索立夫定(sorivudine)、索伐瑞韋(sovaprevir)、塔利韋林(taribavirin)、特拉瑞韋(telaprevir)、替比夫定(telbivudine)、替諾福韋(tenofovir)、替諾福韋酯(tenofovir disoproxil)、三氮唑核苷(triazavirin)、三氟尿苷(trifl uridine)、曲金剛胺(tromantadine)、阿比多爾(umifenovir)、烏磷布韋(uprifosbuvir)、伐昔洛韋(valaciclovir)、纈更昔洛韋(valgancicovir)、伐尼瑞韋(vaniprevir)、維德瑞韋(vedroprevir)、維帕他韋(velpatasvir)、阿糖腺苷(vidarabine)、伏西瑞韋(voxilaprevir)或紮那米韋(zanamivir),或其任意組合。 這些和其他治療劑和行為改變是本領域已知的,用於治療受試者的PD-L1相關疾病或病症,並且可以與本發明的一種或多種PD-L1 dsRNA藥劑的施用聯合施用給受試者以治療PD-L1相關疾病或病症。施用給細胞或受試者以治療PD-L1相關疾病或病症的本發明的PD-L1 dsRNA藥劑可以與一種或多種其他治療劑或活化劑協同作用,並提高一種或多種治療劑或活化劑的有效性和/或提高PD-L1 dsRNA藥劑在治療PD-L1相關疾病或病症方面的有效性。In certain embodiments of the present invention, a PD-L1 dsRNA agent is administered to a subject together with one or more additional treatment regimens for treating a PD-L1-related disease or condition to treat a PD-L1-related disease or condition. Non-limiting examples of additional treatment regimens are: administration of one or more PD-L1 antisense polynucleotides of the present invention, administration of non-PD-L1 dsRNA therapeutic agents, and behavioral changes. Additional treatment regimens may be administered at one or more of the following times: before, simultaneously, and after administration of the PD-L1 dsRNA agent of the present invention. It should be understood that "simultaneously" as used herein refers to within 0.5 minutes, within 0.10 minutes, within 0.30 minutes, within 0.45 minutes, and within 0.60 minutes, and "zero" refers to the time when the PD-L1 dsRNA agent of the present invention is administered to the subject. Non-limiting examples of non-PD-L1 dsRNA therapeutics include: other cancer therapeutics selected from surgery, radiation therapy, chemotherapy, targeted therapy, immunotherapy, or hormonal therapy. Including but not limited to alemtuzumab, altretamine, azacitidine, bendamustine, bleomycin, bortezomib, busulfan, cabazitaxel, capecitabine, carboplatin, carmofur, carmustine, chlorambucil, chlormethine, cisplatin, cladribine, clofarabine, cyclophosphamide, cytarabine, dacarbazine, dactinomycin cin), daunorubicin, decitabine, denosumab, docetaxel, doxorubicin, epirubicin, estramustine, etoposide, everolimus, floxuridine, fludarabine, fluorouracil, fotemustine, gemcitabine, gemtuzumab, hydroxycarbamide, ibritumomab, idarubicin, ifosfamide, irinotecan, ixabepilone, epilone, lomustine, melphalan, mercaptopurine, methotrexate, mitomycin, mitoxantrone, nedaplatin, nelarabine, ofatumumab, oxaliplatin, paclitaxel, pemetrexed, pentostatin, pertuzumab, procarbazine, raltitrexed, streptozotocin, tegafur, temozolomide, temsirolimus, teniposide iposide, tioguanine, topotecan, tositumomab, valrubicin, vinblastine, vincristine, vindesine, vinflunine, or vinorelbine, acalabrutinib, adavosertib, afatinib, alectinib, axitinib, binimetinib, bosutinib, brigatinib, cediranib, ceritinib, cetuximab, cobimetinib, crizotinib Crizotinib, cabozantinib, dacomitinib, dasatinib, entrectinib, erdafitinib, erlotinib, fostamatinib, gefitinib, ibrutinib, imatinib, lapatinib, lenvatinib, lestaurtinib, lortatinib, masitinib, momelotinib, mubritinib, neratinib, nilotinib, nintedanib, olmutinib , osimertinib, pacritinib, panitumumab, pazopanib, pegaptanib, ponatinib, radotinib, regorafenib, rociletinib, ruxolitinib, selumetinib, semaxanib, sorafenib, sunitinib, SU6656, tivozanib, toceranib, trametinib, trastuzumab, vandetanib or vemurafenib, nivolumab, pembrolizumab pembrolizumab, spartalizumab, cemiplimab, camrelizumab, sintilimab, tislelizumab, toripalimab, AMP-224 or AMP-514, atezolizumab, avelumab, durvalumab, KN035, AUNP12, CA-170 or BMS-986189, ipilimumab or tremilimumab, aflibercept, axitinib, bevacizumab, brivanib, cabozantinib, cediran ib), lenvatinib, linifmib, nintedanib, pazopanib, ponatinib, ramucirumab, regorafenib, semaxanib, sorafenib, sunitinib, tivozanib ), toceranib or vandetanib, AB-423, AB-506, ABI-H2158, ABI-H0731, acyclovir, adapromine, adefovir, alafenamide, amantadine, asunaprevir, baloxavir marboxil), beclabuvir, boceprevir, brivudine, cidofovir, ciluprevir, clevudine, cytarabine, daclatasvir, danoprevir, dasabuvir, deleobuvir, dipivoxil, edoxudine, elbasvir ), entecavir, faldaprevir, famciclovir, favipiravir, filibuvir, fomivirsen, foscamet, galidesivir, ganciclovir, glecaprevir, GLS4, grazoprevir, idoxuridine, imiquimod, IFN-a, interferon alfa 2b, JNJ-440, JNJ-6379, lamivudine, laninamivir, ledipasvir, mericitabine, methisazone, MK-608, moroxydine, narlaprevir, NITD008, NZ-4, odalasvir, ombitasvir, oseltamivir ), paritaprevir, peginterferon alpha-2a, penciclovir, peramivir, pibrentasvir, pimodivir, pleconaril, podophyllotoxin, presatovir, radalbuvir, ravidasvir, remdesivir, REP 2139, REP 2165, resiquimod, RG7907, ribavirin, rifampicin, rimantadine, ruzasvir, samatasvir, setrobuvir, simeprevir, sofosbuvir, sorivudine, sovaprevir, taribavirin, telaprevir, telbivudine, tenofovir, tenofovir disoproxil, triazavirin, trifluridine uridine), tromantadine, umifenovir, uprifosbuvir, valaciclovir, valgancicovir, vaniprevir, vedroprevir, velpatasvir, vidarabine, voxilaprevir or zanamivir, or any combination thereof. These and other therapeutic agents and behavioral changes are known in the art for treating a PD-L1-related disease or disorder in a subject and can be administered to a subject in combination with administration of one or more PD-L1 dsRNA agents of the present invention to treat a PD-L1-related disease or disorder. The PD-L1 dsRNA agent of the present invention administered to cells or subjects for the treatment of PD-L1-related diseases or disorders can act synergistically with one or more other therapeutic agents or activators and enhance the effectiveness of one or more therapeutic agents or activators and/or enhance the effectiveness of the PD-L1 dsRNA agent in treating PD-L1-related diseases or disorders.
本發明的治療方法包括施用PD-L1 dsRNA藥劑,可在PD-L1相關疾病或病症發作之前和/或PD-L1相關疾病或病症存在時使用,包括疾病或病症的早期、中期和晚期以及這些階段之前和之後的所有時間。本發明的方法還可用於治療之前已用一種或多種其他治療劑和/或治療活動治療過PD-L1相關疾病或病症的受試者,這些治療劑和/或治療活動在治療受試者的PD-L1相關疾病或病症方面沒有成功、成功率很低和/或不再成功。 載體編碼的 dsRNAs The treatment methods of the present invention include administering a PD-L1 dsRNA agent, which can be used before the onset of a PD-L1-related disease or condition and/or while a PD-L1-related disease or condition exists, including the early, middle and late stages of the disease or condition and all times before and after these stages. The methods of the present invention can also be used to treat subjects who have previously been treated for a PD-L1-related disease or condition with one or more other therapeutic agents and/or therapeutic activities that were unsuccessful, had low success rates and/or were no longer successful in treating the subject's PD-L1-related disease or condition. Vector-Encoded dsRNAs
在本發明的某些實施方案中,可以使用載體將PD-L1 dsRNA劑遞送到細胞中。PD-L1 dsRNA劑轉錄單元可以包含在DNA或RNA載體中。用於將序列遞送到細胞和/或對象中的此類編碼轉基因的載體的製備和使用是本領域公知的。可在本發明的方法中使用導致PD-L1 dsRNA瞬時表達的載體,瞬時表達例如至少1、2、3、4、5、6、7、8、9、10小時或更多小時、1、2、3、4、5、6、7、8、9、10 周或更多周。瞬時表達的長度可以使用基於以下要素的常規方法確定:例如但不限於所選的特定載體構建體和靶細胞和/或組織。此類轉基因可作為線性構建體、環狀質粒或病毒載體引入,其可為整合或非整合載體。也可以構建轉基因以使其作為染色體外質粒遺傳(Gassmann, et al., Proc. Natl. Acad. Sci. USA (1995) 92:1292)。In certain embodiments of the present invention, a vector may be used to deliver a PD-L1 dsRNA agent to a cell. The PD-L1 dsRNA agent transcription unit may be contained in a DNA or RNA vector. The preparation and use of such vectors encoding transgenes for delivering sequences to cells and/or subjects are well known in the art. Vectors that cause transient expression of PD-L1 dsRNA may be used in the methods of the present invention, for example, at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 hours or more, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 weeks or more. The length of transient expression may be determined using conventional methods based on factors such as, but not limited to, the specific vector construct and target cells and/or tissues selected. Such transgenes can be introduced as linear constructs, circular plasmids or viral vectors, which can be integrating or non-integrating vectors. Transgenes can also be constructed so that they are inherited as extrachromosomal plasmids (Gassmann, et al., Proc. Natl. Acad. Sci. USA (1995) 92:1292).
PD-L1 dsRNA劑的單鏈或多鏈可以從表達載體上的啟動子轉錄。在要表達兩條單獨的鏈以產生例如dsRNA的情況下,可以使用例如轉染或感染的方式將兩個單獨的表達載體共同引入細胞。在某些實施方案中,本發明的PD-L1 dsRNA劑的每條單獨鏈可由包含在同一表達載體上的啟動子轉錄。在本發明的某些實施方案中, PD-L1 dsRNA劑被表達為通過接頭多核苷酸序列連接的反向重複多核苷酸,使得PD-L1 dsRNA劑具有莖環結構。A single strand or multiple strands of a PD-L1 dsRNA agent can be transcribed from a promoter on an expression vector. In the case where two separate strands are to be expressed to produce, for example, dsRNA, two separate expression vectors can be co-introduced into cells using, for example, transfection or infection. In certain embodiments, each separate strand of a PD-L1 dsRNA agent of the present invention can be transcribed from a promoter contained on the same expression vector. In certain embodiments of the present invention, a PD-L1 dsRNA agent is expressed as an inverted repeat polynucleotide connected by a linker polynucleotide sequence, such that the PD-L1 dsRNA agent has a stem-loop structure.
RNA 表達載體的非限制性示例是 DNA 質粒或病毒載體。本發明實施例中有用的表達載體可以與真核細胞相容。真核細胞表達載體在本領域中常規使用,並且可從許多商業來源獲得。PD-L1 dsRNA表達載體的遞送可以是全身性的,例如通過靜脈內或肌肉內給藥,通過給藥至從受試者移出的靶細胞然後再引入受試者體內,或者通過允許引入所需靶細胞的任何其他方式。Non-limiting examples of RNA expression vectors are DNA plasmids or viral vectors. Expression vectors useful in embodiments of the present invention may be compatible with eukaryotic cells. Eukaryotic cell expression vectors are routinely used in the art and are available from many commercial sources. Delivery of PD-L1 dsRNA expression vectors may be systemic, for example, by intravenous or intramuscular administration, by administration to target cells removed from a subject and then reintroduced into the subject, or by any other means that allows introduction into the desired target cells.
可包含在該方法的實施方案中的病毒載體系統包括但不限於:(a)腺病毒載體;(b)逆轉錄病毒載體,包括但不限於慢病毒載體、莫洛尼鼠白血病病毒等;(c)腺相關病毒載體;(d)單純皰疹病毒載體;(e)SV 40載體;(f)多瘤病毒載體;(g)乳頭瘤病毒載體;(h)小核糖核酸病毒載體;(i)痘病毒載體,例如正痘病毒載體或禽痘病毒載體,例如金絲雀痘病毒或雞痘病毒;以及(j)輔助依賴型或無腸腺病毒。用於重組表達PD-L1 dsRNA劑的構建體可包括調節元件,例如啟動子、增強子等,其可被選擇以提供組成性或受調節/誘導的表達。病毒載體系統、啟動子和增強子等的使用是本領域的常規技術,並且可以與本文描述的方法和組合物結合使用。Viral vector systems that may be included in embodiments of the method include, but are not limited to: (a) adenoviral vectors; (b) retroviral vectors, including but not limited to lentiviral vectors, Moloney murine leukemia virus, etc.; (c) adeno-associated viral vectors; (d) herpes simplex virus vectors; (e) SV 40 vectors; (f) polyoma virus vectors; (g) papilloma virus vectors; (h) picornavirus vectors; (i) poxvirus vectors, such as orthopoxvirus vectors or avipoxvirus vectors, such as canarypox virus or chickenpox virus; and (j) helper-dependent or intestinal adenovirus. Constructs for recombinant expression of PD-L1 dsRNA agents may include regulatory elements, such as promoters, enhancers, etc., which may be selected to provide constitutive or regulated/induced expression. The use of viral vector systems, promoters and enhancers, etc. is routine in the art and can be used in conjunction with the methods and compositions described herein.
本發明的某些實施方案包括使用病毒載體將PD-L1 dsRNA藥劑遞送到細胞中。本領域常規使用多種基於腺病毒的遞送系統遞送到例如肺、肝、中樞神經系統、內皮細胞和肌肉。可用於本發明方法的病毒載體的非限制性實例是:AAV載體、痘病毒(例如牛痘病毒)、改良安卡拉病毒 (MVA)、NYVAC、禽痘如禽痘或金絲雀痘病毒。Certain embodiments of the present invention include the use of viral vectors to deliver PD-L1 dsRNA agents to cells. A variety of adenovirus-based delivery systems are routinely used in the art for delivery to, for example, the lungs, liver, central nervous system, endothelial cells, and muscle. Non-limiting examples of viral vectors that can be used in the methods of the present invention are: AAV vectors, poxviruses (e.g., vaccinia virus), modified Ankara virus (MVA), NYVAC, avian pox such as fowlpox or canarypox virus.
本發明的某些實施方案包括使用載體將PD-L1 dsRNA藥劑遞送到細胞中的方法,並且此類載體可以存在於藥學上可接受的載體中,該載體可以但不必包括嵌入基因遞送載體的緩釋基質。在某些實施方案中,遞送PD-L1 dsRNA的載體可以由重組細胞產生,並且本發明的藥物組合物可以包括產生PD-L1 dsRNA遞送系統的一個或多個細胞。 含有 PD-L1 dsRNA 或 ssRNA 試劑的藥物組合物 Certain embodiments of the present invention include methods of delivering PD-L1 dsRNA agents to cells using vectors, and such vectors may be present in a pharmaceutically acceptable carrier that may, but need not, include a sustained release matrix into which the gene delivery vector is embedded. In certain embodiments, the vector that delivers PD-L1 dsRNA may be produced by recombinant cells, and the pharmaceutical compositions of the present invention may include one or more cells that produce the PD-L1 dsRNA delivery system. Pharmaceutical compositions containing PD-L1 dsRNA or ssRNA agents
本發明的某些實施方案包括含有PD-L1 dsRNA劑或PD-L1反義多核苷酸劑和藥學上可接受的載體的藥物組合物的用途。含有PD-L1 dsRNA劑或PD-L1反義多核苷酸劑的藥物組合物可用於本發明的方法中以降低細胞中的PD-L1基因表達和PD-L1活性,並且可用於治療PD-L1相關疾病或病症。此類藥物組合物可根據遞送方式配製。用於遞送方式的製劑的非限制性實例是:配製用於皮下遞送的組合物、配製用於通過腸胃外遞送全身給藥的組合物、配製用於靜脈內 (IV) 遞送的組合物、配製用於鞘內遞送的組合物、配製用於直接遞送到腦中的組合物等。施用本發明的藥物組合物以將PD-L1 dsRNA劑或PD-L1反義多核苷酸劑遞送到細胞中可以使用一種或多種方式進行,例如:局部 (例如,通過透皮貼劑)、肺部,例如,通過吸入或吹入粉末或氣霧劑,包括通過霧化器;氣管內、鼻內、表皮和透皮、口服或腸胃外。腸胃外給藥包括靜脈內、動脈內、皮下、腹膜內或肌肉內注射或輸注;皮下,例如,通過植入裝置;或顱內,例如通過腦實質內、鞘內或腦室內給藥。PD -L1 dsRNA劑或PD-L1反義多核苷酸劑也可直接遞送至靶組織,例如直接遞送至肝臟、直接遞送至腎臟等。應理解,“遞送PD-L1 dsRNA劑”或“遞送PD-L1反義多核苷酸劑”進入細胞分別包括直接遞送PD-L1 dsRNA劑或PD-L1反義多核苷酸劑,以及直接在細胞中表達PD-L1 dsRNA試劑以及從遞送到細胞中的編碼載體表達PD-L1 dsRNA試劑,或使得PD-L1 dsRNA或PD-L1反義多核苷酸試劑出現在細胞中的任何合適的方式。製劑的製備和使用以及用於遞送抑制性RNA的手段是本領域公知的和常規使用的。Certain embodiments of the present invention include the use of a pharmaceutical composition containing a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent and a pharmaceutically acceptable carrier. The pharmaceutical composition containing a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent can be used in the method of the present invention to reduce PD-L1 gene expression and PD-L1 activity in cells, and can be used to treat PD-L1 related diseases or conditions. Such pharmaceutical compositions can be formulated according to the delivery method. Non-limiting examples of formulations for delivery modes are: compositions formulated for subcutaneous delivery, compositions formulated for systemic administration via parenteral delivery, compositions formulated for intravenous (IV) delivery, compositions formulated for intrathecal delivery, compositions formulated for direct delivery to the brain, etc. Administration of the pharmaceutical compositions of the present invention to deliver PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents to cells can be performed using one or more modes, such as: topical (e.g., via a transdermal patch), pulmonary, for example, by inhalation or insufflation of a powder or aerosol, including via a nebulizer; intratracheal, intranasal, epidermal and transdermal, oral or parenteral. Parenteral administration includes intravenous, intraarterial, subcutaneous, intraperitoneal or intramuscular injection or infusion; subcutaneous, for example, by implantation; or intracranial, for example, by intraparenchymal, intrathecal or intraventricular administration. PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents can also be delivered directly to target tissues, such as directly to the liver, directly to the kidneys, etc. It should be understood that "delivering a PD-L1 dsRNA agent" or "delivering a PD-L1 antisense polynucleotide agent" into a cell includes directly delivering a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent, respectively, and expressing a PD-L1 dsRNA agent directly in a cell and expressing a PD-L1 dsRNA agent from an encoding vector delivered to a cell, or any suitable means for causing a PD-L1 dsRNA or a PD-L1 antisense polynucleotide agent to appear in a cell. The preparation and use of the formulation and the means for delivering inhibitory RNA are well known and routinely used in the art.
本文所用的“藥物組合物”包括藥理學有效量的本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑以及藥學上可接受的載體。術語“藥學上可接受的載體”是指用於施用治療劑的載體。此類載體包括但不限於鹽水、緩衝鹽水、葡萄糖、水、甘油、乙醇及其組合。該術語明確排除細胞培養基。對於口服給藥的藥物,藥學上可接受的載體包括但不限於藥學上可接受的賦形劑,例如惰性稀釋劑、崩解劑、黏合劑、潤滑劑、甜味劑、調味劑、著色劑和防腐劑。合適的惰性稀釋劑包括碳酸鈉和碳酸鈣、磷酸鈉和磷酸鈣以及乳糖,而玉米澱粉和海藻酸是合適的崩解劑。黏合劑可以包括澱粉和明膠,而潤滑劑(如果存在)通常是硬脂酸鎂、硬脂酸或滑石粉。如果需要,片劑可以用諸如單硬脂酸甘油酯或二硬脂酸甘油酯之類的材料包衣,以延遲胃腸道的吸收。藥物製劑中包含的藥劑將在下文進一步描述。The "pharmaceutical composition" used herein includes a pharmacologically effective amount of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention and a pharmaceutically acceptable carrier. The term "pharmaceutically acceptable carrier" refers to a carrier for administering a therapeutic agent. Such carriers include, but are not limited to, saline, buffered saline, glucose, water, glycerol, ethanol, and combinations thereof. The term explicitly excludes cell culture media. For drugs administered orally, pharmaceutically acceptable carriers include, but are not limited to, pharmaceutically acceptable excipients, such as inert diluents, disintegrants, binders, lubricants, sweeteners, flavorings, coloring agents, and preservatives. Suitable inert diluents include sodium and calcium carbonates, sodium and calcium phosphates, and lactose, while corn starch and alginic acid are suitable disintegrants. Binders may include starches and gelatin, while lubricants, if present, are typically magnesium stearate, stearic acid, or talc. If desired, tablets may be coated with materials such as glyceryl monostearate or glyceryl distearate to delay gastrointestinal absorption. The agents included in the pharmaceutical formulations will be further described below.
本文使用的術語如:“藥理學有效量”、“治療有效量”和“有效量”是指本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑產生預期藥理學、治療或預防結果的量。例如,如果當與疾病或病症相關的可測量參數至少降低10%時,則認為給定的臨床治療有效,那麼用於治療該疾病或病症的藥物的治療有效量是使該參數至少降低10%所需的量。例如,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的治療有效量可以將PD-L1多肽水平降低至少10%。 有效量 As used herein, terms such as "pharmacologically effective amount", "therapeutically effective amount" and "effective amount" refer to the amount of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention that produces the desired pharmacological, therapeutic or preventive result. For example, if a given clinical treatment is considered effective when a measurable parameter associated with a disease or condition is reduced by at least 10%, then the therapeutically effective amount of the drug used to treat the disease or condition is the amount required to reduce the parameter by at least 10%. For example, a therapeutically effective amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent can reduce the level of PD-L1 polypeptide by at least 10%. Effective amount
本發明的方法在某些方面包括使細胞與有效量的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑接觸,以降低所接觸細胞中的PD-L1基因表達。本發明方法的某些實施方案包括向受試者施用有效量的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑以降低受試者的PD-L1基因表達並治療受試者的PD-L1相關疾病或病症。在降低PD-L1表達和/或治療PD-L1相關疾病或病症方面使用的“有效量”是實現所需生物學效應所必需或足夠的量。例如,用於治療PD-L1 相關疾病或病症的 PD-L1 dsRNA藥劑或PD -L1反義多核苷酸藥劑的有效量可以是 (i) 減緩或停止疾病或病症進展所必需的量;或 (ii) 逆轉、減輕或消除該疾病或病症的一種或多種症狀。在本發明的一些方面,有效量是當向需要治療PD-L1相關疾病或病症的受試者施用時,導致預防和/或治療該疾病或病症的治療反應的PD-L1 dsRNA劑或PD-L1反義多核苷酸劑的量。根據本發明的一些方面,有效量是當與用於 PD-L1 相關疾病或病症的另一種治療方法組合或共同施用時,導致預防和/或治療該疾病或病症的治療反應的本發明的PD-L1 dsRNA劑或PD-L1反義多核苷酸劑的量。在本發明的一些實施方案中,用本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑治療受試者的生物學效應可以是PD-L1相關疾病或病症所導致的症狀的改善和/或完全消除。在本發明的一些實施方案中,生物學效應是PD-L1相關疾病或病症的完全消除,例如,通過診斷測試表明受試者沒有PD-L1相關疾病或病症來證明。可以檢測到的生理症狀的非限制性示例包括施用本發明的藥劑後受試者肝臟中PD-L1水平的降低。可以使用本領域已知的其他評估PD-L1相關疾病或病症狀態的方法來確定本發明的藥劑和/或方法對PD-L1相關疾病或病症的影響。The methods of the present invention in certain aspects include contacting cells with an effective amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to reduce PD-L1 gene expression in the contacted cells. Certain embodiments of the methods of the present invention include administering an effective amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to a subject to reduce PD-L1 gene expression in the subject and treat a PD-L1-related disease or condition in the subject. An "effective amount" used in reducing PD-L1 expression and/or treating a PD-L1-related disease or condition is an amount necessary or sufficient to achieve a desired biological effect. For example, an effective amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent for treating a PD-L1-related disease or disorder may be an amount necessary to (i) slow or stop the progression of the disease or disorder; or (ii) reverse, alleviate or eliminate one or more symptoms of the disease or disorder. In some aspects of the present invention, an effective amount is an amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent that, when administered to a subject in need of treatment for a PD-L1-related disease or disorder, results in a therapeutic response that prevents and/or treats the disease or disorder. According to some aspects of the invention, an effective amount is an amount of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the invention that, when combined or co-administered with another treatment method for a PD-L1-related disease or condition, results in a therapeutic response that prevents and/or treats the disease or condition. In some embodiments of the invention, the biological effect of treating a subject with the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the invention may be an improvement and/or complete elimination of symptoms caused by a PD-L1-related disease or condition. In some embodiments of the invention, the biological effect is complete elimination of a PD-L1-related disease or condition, as demonstrated, for example, by a diagnostic test showing that the subject does not have a PD-L1-related disease or condition. Non-limiting examples of physiological symptoms that can be detected include a decrease in the level of PD-L1 in the liver of a subject after administration of the medicament of the present invention. Other methods known in the art for assessing the status of PD-L1-related diseases or disorders can be used to determine the effects of the medicaments and/or methods of the present invention on PD-L1-related diseases or disorders.
通常在臨床試驗中確定將黃PD-L1多肽活性降低至治療PD-L1相關疾病或病症的水平的PD-L1 dsRNA試劑或PD-L1反義多核苷酸試劑的有效量,這樣的臨床試驗在盲法研究中為測試人群與對照人群建立有效劑量。在某些實施方案中,有效量是導致期望反應的量,例如,在患有該疾病或病症的細胞、組織和/或受試者中減輕PD-L1相關疾病或病症的量。因此,用於治療可通過降低PD-L1多肽活性來治療的PD-L1相關疾病或病症的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的有效量可以是這樣的量,即當施用時,將受試者體內的PD-L1多肽活性量降低至小於未施用PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑時細胞、組織和/或受試者體內存在的PD-L1多肽活性量的量。在本發明的某些方面,未接觸或未施用本發明的PD- L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的細胞、組織和/或受試者體內存在的PD-L1多肽活性和/或PD-L1基因表達水平稱為“對照”量。在本發明的方法的一些實施方案中,受試者的對照量是受試者的治療前量,換句話說,換言之,受試者在施用PD-L1試劑之前的水平可以是該受試者的對照水平,並且用於與其在向受試者施用siRNA後的PD-L1多肽活性和/或PD-L1基因表達水平相比較。在治療PD-L1相關疾病或病症的情況下,期望的反應可能是減少或消除細胞、組織和/或受試者中疾病或病症的一種或多種症狀。減少或消除可能是暫時的,也可能是永久的。應理解,可以使用確定PD-L1多肽活性、PD-L1基因表達、症狀評估、臨床測試等方法來監測 PD-L1 相關疾病或病症的狀態。在本發明的一些方面,對PD-L1相關疾病或病症的治療的期望反應是延遲疾病或病症的發作甚至預防疾病或病症的發作。The effective amount of a PD-L1 dsRNA reagent or a PD-L1 antisense polynucleotide reagent that reduces the activity of a yellow PD-L1 polypeptide to a level that treats a PD-L1-related disease or condition is generally determined in a clinical trial, where an effective dose is established for a test population versus a control population in a blinded study. In certain embodiments, an effective amount is an amount that results in a desired response, for example, an amount that reduces a PD-L1-related disease or condition in cells, tissues, and/or subjects suffering from the disease or condition. Therefore, the effective amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent for treating a PD-L1-related disease or condition that can be treated by reducing the activity of a PD-L1 polypeptide may be an amount that, when administered, reduces the amount of PD-L1 polypeptide activity in a subject to an amount less than the amount of PD-L1 polypeptide activity present in cells, tissues, and/or subjects when the PD-L1 dsRNA agent or the PD-L1 antisense polynucleotide agent is not administered. In certain aspects of the present invention, the PD-L1 polypeptide activity and/or PD-L1 gene expression level present in cells, tissues, and/or subjects that are not contacted with or administered the PD-L1 dsRNA agent or the PD-L1 antisense polynucleotide agent of the present invention is referred to as a "control" amount. In some embodiments of the methods of the present invention, the control amount of the subject is the pre-treatment amount of the subject. In other words, the level of the subject before the administration of the PD-L1 agent can be the control level of the subject and is used to compare with its PD-L1 polypeptide activity and/or PD-L1 gene expression level after the siRNA is administered to the subject. In the case of treating a PD-L1-related disease or condition, the desired response may be to reduce or eliminate one or more symptoms of the disease or condition in cells, tissues and/or subjects. The reduction or elimination may be temporary or permanent. It should be understood that the status of PD-L1-related diseases or conditions can be monitored using methods such as determining PD-L1 polypeptide activity, PD-L1 gene expression, symptom assessment, clinical testing, etc. In some aspects of the invention, the desired response to treatment of a PD-L1-associated disease or disorder is to delay the onset of the disease or disorder or even prevent the onset of the disease or disorder.
還可以通過評估施用PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑對細胞或受試者的生理效應(例如施用後PD-L1相關疾病或病症的減少)來確定降低PD-L1多肽活性的化合物的有效量。可以使用受試者的測定和/或症狀監測來確定本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑(其可以以本發明的藥物化合物形式施用)的功效,並確定對治療有無反應。一個非限制性例子是,一種或多種本領域已知的PD-L1生物活性測試,通過免疫反應的存在來評估,免疫反應的表現為針對傳染原的抗體或免疫細胞的存在,通過感染(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的一種或多種體徵或症狀的減少來評估,通過檢測受試者體內的抗HBsAg抗體水平來評估受試者血清中的乙型肝炎表面抗原( HBsAg) 、 HBeAg或HB cccDNA。另一個非限制性例子是,在用本發明的PD-L1 dsRNA藥劑治療受試者之前和之後,可以使用一種或多種本領域已知的肝功能測試來確定受試者體內PD-L1相關脂質失衡的狀態。The effective amount of a compound that reduces the activity of a PD-L1 polypeptide can also be determined by evaluating the physiological effects of administering a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to cells or subjects (e.g., a reduction in PD-L1-related diseases or conditions after administration). Assays and/or symptom monitoring of subjects can be used to determine the efficacy of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention (which can be administered in the form of a pharmaceutical compound of the present invention) and to determine whether there is a response to treatment. As a non-limiting example, one or more PD-L1 biological activity tests known in the art are evaluated by the presence of an immune response, which is manifested by the presence of antibodies or immune cells against an infectious agent, by the reduction of one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by detecting the level of anti-HBsAg antibodies in the subject to evaluate the hepatitis B surface antigen (HBsAg), HBeAg or HB cccDNA in the subject's serum. As another non-limiting example, one or more liver function tests known in the art can be used to determine the state of PD-L1-related lipid imbalance in the subject before and after treatment of the subject with the PD-L1 dsRNA agent of the present invention.
本發明的一些實施方案包括確定向受試者施用的本發明的PD-L1 dsRNA試劑或PD-L1反義多核苷酸試劑來治療PD-L1相關疾病或病症的功效的方法,其通過評估和/或監測受試者中PD-L1相關疾病或病症的一種或更多種“生理特徵”來進行。PD-L1相關疾病或病症的生理特徵的非限制性示例是PD-L1 mRNA水平、 PD-L1蛋白水平或PD-L1表達的減少通過以下方面來間接評估:通過測量受試者樣品(例如,血清樣品)中的PD-L1生物活性的降低或PD-L1水平來評估,通過測量傳染原中存在的蛋白質、核酸或碳水化合物的減少來評估,通過評估針對傳染源的抗體或免疫細胞來免疫反應來評估,通過一種或多種感染體徵或症狀(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來評估,通過測量受試者血清中的乙肝抗原(HBsAg)、HBeAg或HB cccDNA的水平來評估,通過檢測受試者的抗HBsAg抗體水平來評估。確定這種生理特徵的標準方法是本領域已知的,包括但不限於血液測試、影像學研究、身體檢查等。Some embodiments of the invention include methods of determining the efficacy of a PD-L1 dsRNA reagent or a PD-L1 antisense polynucleotide reagent of the invention administered to a subject for treating a PD-L1-related disease or disorder by assessing and/or monitoring one or more "physiological characteristics" of the PD-L1-related disease or disorder in the subject. Non-limiting examples of physiological characteristics of a PD-L1-related disease or disorder are PD-L1 mRNA levels, PD-L1 protein levels, or a decrease in PD-L1 expression assessed indirectly by measuring a decrease in PD-L1 biological activity or PD-L1 levels in a subject sample (e.g., a serum sample), by measuring a decrease in proteins, nucleic acids, or carbohydrates present in an infectious agent, by assessing an immune response against an infectious agent by antibodies or immune cells, by a decrease in one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by measuring the level of hepatitis B antigen (HBsAg), HBeAg, or HB cccDNA in a subject's serum, by detecting anti-HBsAg antibody levels in a subject. Standard methods for determining such physiological characteristics are known in the art and include, but are not limited to, blood tests, imaging studies, physical examination, etc.
應理解的是,可以至少部分地基於對受試者的疾病和/或病症狀態和/或生理特徵的確定來調整向受試者施用的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的量。治療量可以例如通過增加或減少PD-L1 -dsRNA藥劑或PD-L1反義多核苷酸藥劑的量、通過改變分別施用PD-L1 dsRNA藥劑或PD- L1反義多核苷酸藥劑的組合物、通過改變給藥途徑、通過改變給藥時間等來改變。PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的有效量將隨著所治療的特定病症、所治療受試者的年齡和身體狀況、病症的嚴重程度、治療持續時間、共同治療的性質(如果有)、具體給藥途徑以及健康從業者的知識和專長範圍內的其他因素而變化。 例如,有效量可能取決於有效治療PD-L1相關疾病或病症的所需PD-L1多肽活性和/或PD-L1基因表達水平。技術人員可以根據經驗確定用於本發明方法的特定PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的有效量,而無需過度實驗。結合本文提供的教導,通過從本發明的各種PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑中進行選擇,並權衡諸如效力、相對生物利用度、患者體重、不良副作用的嚴重程度和優選的給藥方式等因素,可以規劃有效治療特定受試者的有效預防或治療方案。如在本發明的實施方案中使用的,本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的有效量可以是當與細胞接觸時在細胞中產生所需生物學效應的量。It should be understood that the amount of PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent administered to a subject can be adjusted based at least in part on the determination of the subject's disease and/or condition state and/or physiological characteristics. The therapeutic amount can be changed, for example, by increasing or decreasing the amount of PD-L1-dsRNA agent or PD-L1 antisense polynucleotide agent, by changing the composition of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent, respectively, by changing the route of administration, by changing the time of administration, etc. The effective amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent will vary with the specific condition being treated, the age and physical condition of the subject being treated, the severity of the condition, the duration of treatment, the nature of co-treatment (if any), the specific route of administration, and other factors within the knowledge and expertise of a health practitioner. For example, the effective amount may depend on the desired PD-L1 polypeptide activity and/or PD-L1 gene expression level for effective treatment of a PD-L1-related disease or condition. The effective amount of a specific PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent for use in the methods of the present invention can be determined empirically by a skilled artisan without undue experimentation. In combination with the teachings provided herein, by selecting from the various PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents of the present invention and weighing factors such as potency, relative bioavailability, patient weight, severity of adverse side effects, and preferred administration methods, an effective preventive or therapeutic regimen can be planned to effectively treat a particular subject. As used in the embodiments of the present invention, an effective amount of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention can be an amount that produces a desired biological effect in a cell when in contact with the cell.
應認識到, PD-L1基因沉默可在任何表達PD-L1的細胞中確定,無論是組成型的還是通過基因組工程進行,以及通過任何適當的測定。在本發明的一些實施方案中,通過施用本發明的PD-L1 dsRNA藥劑,PD-L1基因表達降低至少5%、6%、7%、8%、9%、10%、15%、20%、25%、30%、35%、40%、45%、50%、55%、60%、65%、70%、75%、80%、85%、90%、95%或100%。在本發明的一些實施方案中,通過施用本發明的PD-L1 dsRNA藥劑,PD-L1基因表達降低5%至10%、5%至25%、10%至50%、10%至75%、25%至75%、25%至100% 或50%至100%。 給藥劑量 It should be recognized that PD-L1 gene silencing can be determined in any cell expressing PD-L1, whether constitutively or by genomic engineering, and by any appropriate assay. In some embodiments of the invention, PD-L1 gene expression is reduced by at least 5%, 6%, 7%, 8%, 9%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95% or 100% by administering a PD-L1 dsRNA agent of the invention. In some embodiments of the present invention, by administering the PD-L1 dsRNA agent of the present invention, PD-L1 gene expression is reduced by 5% to 10%, 5% to 25%, 10% to 50%, 10% to 75%, 25% to 75%, 25% to 100%, or 50% to 100%. Dosage
PD-L1 dsRNA藥劑和PD-L1反義多核苷酸藥劑以足以抑制PD-L1基因表達的劑量在藥物組合物中遞送。在本發明的某些實施方案中,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的劑量在接受者每天每公斤體重 0.01 至 200.0 毫克的範圍內,一般為每天1至50mg/kg體重、5至40mg/kg體重、10至30mg/kg體重、1至20mg/kg體重、1至10mg/kg體重、4至15mg/kg體重,包括端值。例如,PD-L1 dsRNA試劑或PD-L1反義多核苷酸試劑的每單次給藥可以從約0.01mg/kg、0.05mg/kg、0.1mg/kg、0.2mg/kg、0.3mg/kg、0.4mg/kg、0.5mg/kg、1mg/kg、1.1mg/kg、1.2mg/kg、1.3mg/kg、1.4mg/kg、1.5mg/kg、1.6mg/kg、1.7mg/kg、1.8mg/kg、1.9mg/kg、2mg/kg、2.1mg/kg、2.2mg/kg、2.3mg/kg、2.4mg/kg、2.5mg/kg、2.6mg/kg、2.7mg/kg、2.8mg/kg、2.9mg/kg、3.0mg/kg、3.1mg/kg、3.2mg/kg、3.3mg/kg、3.4mg/kg、3.5mg/kg、3.6mg/kg、3.7mg/kg、3.8mg/kg、3.9mg/kg、4mg/kg、4.1mg/kg、4.2mg/kg、4.3mg/kg、4.4mg/kg、4.5mg/kg、4.6mg/kg、4.7mg/kg、4.8mg/kg、4.9mg/kg、5mg/kg、5.1mg/kg、5.2mg/kg、5.3mg/kg、5.4mg/kg、5.5mg/kg、5.6mg/kg、5.7mg/kg、5.8mg/kg、5.9mg/kg、6mg/kg、6.1mg/kg、6.2mg/kg、6.3mg/kg、6.4mg/kg、6.5mg/kg、6.6mg/kg、6.7mg/kg、6.8mg/kg、6.9mg/kg、7mg/kg、7.1mg/kg、7.2mg/kg、7.3mg/kg、7.4mg/kg、7.5mg/kg、7.6mg/kg、7.7mg/kg、7.8mg/kg、7.9mg/kg、8mg/kg、8.1mg/kg、8.2mg/kg、8.3mg/kg、8.4mg/kg、8.5mg/kg、8.6mg/kg、8.7mg/kg、8.8mg/kg、8.9mg/kg、9mg/kg、9.1mg/kg、9.2mg/kg、9.3mg/kg、9.4mg/kg、9.5mg/kg、9.6mg/kg、9.7mg/kg、9.8mg/kg、9.9mg/kg、10mg/kg、11mg/kg、12mg/kg、13mg/kg、14mg/kg、15mg/kg、16mg/kg、17mg/kg、18mg/kg、19mg/kg、20mg/kg、21mg/kg、22mg/kg、23mg/kg、24mg/kg、25mg/kg、26mg/kg、27mg/kg、28mg/kg、29mg/kg、30mg/kg、31mg/kg、32mg/kg、33mg/kg、34mg/kg、35mg/kg、36mg/kg、37mg/kg、38mg/kg、39mg/kg、40mg/kg、41mg/kg、42mg/kg、43mg/kg、44mg/kg、45mg/kg、46mg/kg、47mg/kg、48mg/kg、49mg/kg,至50mg/kg體重的量來施用。PD-L1 dsRNA agents and PD-L1 antisense polynucleotide agents are delivered in a pharmaceutical composition in an amount sufficient to inhibit PD-L1 gene expression. In certain embodiments of the present invention, the dose of PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents is in the range of 0.01 to 200.0 mg per kilogram of body weight per day of the recipient, generally 1 to 50 mg/kg body weight, 5 to 40 mg/kg body weight, 10 to 30 mg/kg body weight, 1 to 20 mg/kg body weight, 1 to 10 mg/kg body weight, 4 to 15 mg/kg body weight per day, including end values. For example, PD-L1 The dosage of each single dose of the dsRNA agent or the PD-L1 antisense polynucleotide agent can be from about 0.01 mg/kg, 0.05 mg/kg, 0.1 mg/kg, 0.2 mg/kg, 0.3 mg/kg, 0.4 mg/kg, 0.5 mg/kg, 1 mg/kg, 1.1 mg/kg, 1.2 mg/kg, 1.3 mg/kg, 1.4 mg/kg, 1.5 mg/kg, 1.6 mg/kg, 1.7 mg/kg, 1.8 mg/kg, 1.9 mg/kg, 2 mg/kg, 2.1 mg/kg, 2.2 mg/kg, 2.3 mg/kg, 2.4 mg/kg, 2.5 mg/kg, 2.6 mg/kg, 2.7 mg/kg, 2.8 mg/kg, 2.9 mg/kg, 3.0 mg/kg, 3.1 mg/kg, 3.2 mg/kg, 3.3 mg/kg g, 3.4mg/kg, 3.5mg/kg, 3.6mg/kg, 3.7mg/kg, 3.8mg/kg, 3.9mg/kg, 4mg/kg, 4.1mg/kg, 4.2m g/kg, 4.3mg/kg, 4.4mg/kg, 4.5mg/kg, 4.6mg/kg, 4.7mg/kg, 4.8mg/kg, 4.9mg/kg, 5mg/kg, 5. 1mg/kg, 5.2mg/kg, 5.3mg/kg, 5.4mg/kg, 5.5mg/kg, 5.6mg/kg, 5.7mg/kg, 5.8mg/kg, 5.9mg/k g, 6mg/kg, 6.1mg/kg, 6.2mg/kg, 6.3mg/kg, 6.4mg/kg, 6.5mg/kg, 6.6mg/kg, 6.7mg/kg, 6.8mg /kg, 6.9mg/kg, 7mg/kg, 7.1mg/kg, 7.2mg/kg, 7.3mg/kg, 7.4mg/kg, 7.5mg/kg, 7.6mg/kg, 7. 7mg/kg, 7.8mg/kg, 7.9mg/kg, 8mg/kg, 8.1mg/kg, 8.2mg/kg, 8.3mg/kg, 8.4mg/kg, 8.5mg/kg, 8.6mg/kg, 8.7mg/kg, 8.8mg/kg, 8.9mg/kg, 9mg/kg, 9.1mg/kg, 9.2mg/kg, 9.3mg/kg, 9.4mg/ kg, 9.5mg/kg, 9.6mg/kg, 9.7mg/kg, 9.8mg/kg, 9.9mg/kg, 10mg/kg, 11mg/kg, 12mg/kg, 13mg/ kg, 14mg/kg, 15mg/kg, 16mg/kg, 17mg/kg, 18mg/kg, 19mg/kg, 20mg/kg, 21mg/kg, 22mg/kg, 23mg/kg, 24mg/kg, 25mg/kg, 26mg/kg, 27mg/kg, 28mg/kg, 29mg/kg, 30mg/kg, 31mg/kg, 32mg/k g, 33mg/kg, 34mg/kg, 35mg/kg, 36mg/kg, 37mg/kg, 38mg/kg, 39mg/kg, 40mg/kg, 41mg/kg, 42m g/kg, 43mg/kg, 44mg/kg, 45mg/kg, 46mg/kg, 47mg/kg, 48mg/kg, 49mg/kg, to 50mg/kg body weight.
在確定本發明的PD-L1 dsRNA藥劑的劑量和給藥時間時,可以考慮各種因素。所給藥的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的絕對量將取決於各種因素,包括共同治療、劑量數和個體受試者參數,包括年齡、身體狀況、體型大小和體重。這些因素是本領域普通技術人員所熟知的,只需常規實驗即可解決。在某些實施方案中,可以使用最大劑量,即根據合理的醫學判斷的最高安全劑量。Various factors may be considered when determining the dosage and administration schedule of the PD-L1 dsRNA agent of the present invention. The absolute amount of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent administered will depend on various factors, including co-treatment, number of doses, and individual subject parameters, including age, physical condition, body size, and weight. These factors are well known to those of ordinary skill in the art and can be resolved with routine experiments. In certain embodiments, a maximum dose may be used, i.e., the highest safe dose based on reasonable medical judgment.
在某些實施方案中,本發明的方法可以包括向受試者施用1、2、3、4、5、6、7、8、9、10 或更多劑量的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑。在一些情況下,可以至少每天、每隔一天、每週、每隔一周、每月等向受試者施用藥物化合物(例如,包含PD-L1 dsRNA藥劑或包含PD-L1反義多核苷酸藥劑)。劑量可以每天給藥一次或每天給藥多次,例如,在一個 24 小時內施用 2、3、4、5 或更多次。本發明的藥物組合物可以每天施用一次,或者PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以作為兩個、三個或更多個亞劑量在一天中以適當的間隔給藥,或者甚至使用連續輸注或通過控釋製劑遞送。在本發明方法的一些實施方案中,每天一次或多次、每週一次或多次、每月一次或多次或每年一次或多次向受試者施用本發明的藥物組合物。In certain embodiments, the methods of the invention may include administering 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more doses of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to a subject. In some cases, a drug compound (e.g., a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent) may be administered to a subject at least daily, every other day, every week, every other week, every month, etc. The dose may be administered once a day or multiple times a day, for example, 2, 3, 4, 5 or more times within a 24-hour period. The pharmaceutical composition of the present invention can be administered once a day, or the PD-L1 dsRNA agent or the PD-L1 antisense polynucleotide agent can be administered as two, three or more sub-doses at appropriate intervals throughout the day, or even by continuous infusion or by controlled release formulation. In some embodiments of the method of the present invention, the pharmaceutical composition of the present invention is administered to the subject once or more per day, once or more per week, once or more per month, or once or more per year.
本發明的方法在某些方面包括單獨施用藥物化合物、與一種或多種其他PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑聯合施用和/或與施用給患有PD-L1相關疾病或病症的受試者的其他藥物療法或治療活動或方案聯合施用藥物化合物。藥物化合物可以以藥物組合物的形式施用。本發明方法中使用的藥物組合物可以是無菌的並且含有一定量的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑,其將PD-L1多肽的活性降低到足以在適合施用給受試者的重量或體積單位中產生所需反應的水平。可以根據不同參數選擇向受試者施用的包含PD-L1 dsRNA試劑或PD-L1反義多核苷酸劑藥物組合物的劑量以降低PD-L1蛋白活性,特別是根據所使用的給藥方式和受試者的狀態來進行選擇。其他因素包括所需的治療時間。如果受試者在初始劑量下的響應不足,則可以在患者耐受性允許的範圍內採用更高的劑量(或通過不同的、更局部的遞送途徑有效地提高劑量)。 治療 The methods of the present invention include, in certain aspects, administering a drug compound alone, in combination with one or more other PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents, and/or in combination with other drug therapies or therapeutic activities or regimens administered to a subject suffering from a PD-L1-related disease or condition. The drug compound may be administered in the form of a pharmaceutical composition. The pharmaceutical composition used in the methods of the present invention may be sterile and contain an amount of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent that reduces the activity of a PD-L1 polypeptide to a level sufficient to produce the desired response in a weight or volume unit suitable for administration to a subject. The dose of the drug composition comprising a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent administered to a subject to reduce PD-L1 protein activity can be selected based on various parameters, particularly the route of administration used and the condition of the subject. Other factors include the desired duration of treatment. If a subject has an inadequate response at the initial dose, a higher dose can be used (or the dose can be effectively increased by a different, more localized route of delivery) as tolerated by the patient. Treatment
本文使用的“PD-L1相關疾病”、“PD-L1相關疾病和病症”和“由PD-L1引起和/或調節的疾病和病症”旨在包括與PD-L1基因或蛋白質相關的任何疾病。此類疾病可能由例如PD-L1蛋白的過量產生、 PD-L1基因的突變、 PD-L1蛋白的異常裂解、 PD-L1與其他蛋白質或其他內源性或外源性物質之間的異常相互作用引起。示例性的PD-L1相關疾病包括但不限於:腫瘤或血液系統惡性腫瘤(例如淋巴瘤/白血病、血液系統惡性腫瘤、乳腺癌、肺癌、結腸癌、卵巢癌、黑色素瘤、膀胱癌、肝癌、唾液腺癌、胃癌、神經膠質瘤、甲狀腺癌、胸腺上皮癌、頭部癌、腎癌、胰腺癌 和頸部癌症)、感染病(例如病毒、細菌、真菌或寄生蟲病)。在某些實施方案中,感染病是慢性感染病,例如由病毒(例如HIV、HBV、HCV 和 HTLV 等)、細菌(例如幽門螺桿菌等)和寄生蟲(例如曼氏血吸蟲)引起的。As used herein, "PD-L1-related diseases", "PD-L1-related diseases and conditions" and "diseases and conditions caused and/or regulated by PD-L1" are intended to include any disease associated with the PD-L1 gene or protein. Such diseases may be caused by, for example, overproduction of PD-L1 protein, mutation of the PD-L1 gene, abnormal cleavage of PD-L1 protein, abnormal interactions between PD-L1 and other proteins or other endogenous or exogenous substances. Exemplary PD-L1-related diseases include, but are not limited to, tumors or hematological malignancies (e.g., lymphoma/leukemia, hematological malignancies, breast cancer, lung cancer, colon cancer, ovarian cancer, melanoma, bladder cancer, liver cancer, salivary gland cancer, gastric cancer, neuroglioma, thyroid cancer, thymic epithelial cancer, head cancer, kidney cancer, pancreatic cancer, and neck cancer), infectious diseases (e.g., viral, bacterial, fungal, or parasitic diseases). In certain embodiments, the infectious disease is a chronic infectious disease, such as caused by viruses (e.g., HIV, HBV, HCV, and HTLV, etc.), bacteria (e.g., Helicobacter pylori, etc.), and parasites (e.g., Schistosoma mansoni).
在本發明的某些方面,可在診斷出PD-L1相關疾病或病症之前或之後的一個或多個時間向受試者施用本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑。在本發明的一些方面,受試者處於患有或發展PD-L1相關疾病或病症的風險中。與發展PD-L1相關疾病或病症的對照風險相比,有發展PD-L1相關疾病或病症風險的受試者是發展PD-L1相關疾病或病症的可能性提高的受試者。在本發明的一些實施方案中,與風險的對照水平相比,風險水平在統計上是顯著的。處於風險中的受試者可以包括,例如,患有或將成為患有預先存在的疾病和/或遺傳異常的受試者,這些疾病和/或遺傳異常使得受試者比沒有預先存在的疾病或遺傳異常的對照受試者更容易患上PD-L1相關疾病或病症;具有PD-L1相關疾病或病症的家族和/或個人病史的受試者;以及先前已接受過PD-L1相關疾病或病症治療的受試者。應當理解,使受試者對PD-L1相關疾病或病症更易感的預先存在的疾病和/或遺傳異常可以是這樣的疾病或遺傳異常:當存在時,其先前已被確定為與發展PD-L1相關疾病或病症的更高可能性具有相關關係。In certain aspects of the invention, the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the invention may be administered to a subject at one or more times before or after a PD-L1-related disease or condition is diagnosed. In some aspects of the invention, the subject is at risk of having or developing a PD-L1-related disease or condition. A subject at risk of developing a PD-L1-related disease or condition is a subject with an increased likelihood of developing a PD-L1-related disease or condition compared to a control risk of developing a PD-L1-related disease or condition. In some embodiments of the invention, the risk level is statistically significant compared to the control level of risk. At-risk subjects may include, for example, subjects who have or will become susceptible to a pre-existing disease and/or genetic abnormality that makes the subject more susceptible to a PD-L1-related disease or disorder than a control subject without the pre-existing disease or genetic abnormality; subjects with a family and/or personal history of a PD-L1-related disease or disorder; and subjects who have previously been treated for a PD-L1-related disease or disorder. It should be understood that a pre-existing disease and/or genetic abnormality that makes a subject more susceptible to a PD-L1-related disease or disorder may be a disease or genetic abnormality that, when present, has previously been identified as being associated with a higher likelihood of developing a PD-L1-related disease or disorder.
應理解,可根據個體受試者的醫療狀況向受試者施用PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑。例如,為受試者提供的醫療保健可評估從受試者獲得的樣本中測量的PD-L1水平,並確定通過施用本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑來降低受試者的PD-L1水平是可取的。在此示例中,即使受試者未被診斷為患有本文公開的PD-L1相關疾病,PD-L1水平也可被視為PD-L1相關疾病的生理特徵。醫療保健提供者可監測受試者的PD-L1水平變化,作為施用的本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的療效的量度。在非限制性實例中,可從受試者獲得生物樣品,例如血液或血清樣品,並在樣品中確定受試者的PD-L1水平。向受試者施用PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑,並在施用後從受試者獲得血液樣品,使用該樣品確定PD-L1水平,並將結果與受試者施用前 (先前) 樣品中確定的結果進行比較。與施用前水平相比,受試者在後續樣品中的PD-L1水平降低表明施用的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑在降低受試者的脂質水平方面有效。It should be understood that a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent may be administered to a subject according to the individual subject's medical condition. For example, the medical care provided to the subject may assess the PD-L1 level measured in a sample obtained from the subject and determine that it is desirable to reduce the subject's PD-L1 level by administering a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent of the present invention. In this example, even if the subject is not diagnosed with a PD-L1-related disease disclosed herein, the PD-L1 level may be considered a physiological characteristic of a PD-L1-related disease. A healthcare provider can monitor changes in the subject's PD-L1 level as a measure of the efficacy of the administered PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention. In a non-limiting example, a biological sample, such as a blood or serum sample, can be obtained from the subject and the subject's PD-L1 level is determined in the sample. A PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent is administered to the subject, and a blood sample is obtained from the subject after administration, the PD-L1 level is determined using the sample, and the result is compared with the result determined in the subject's sample before administration (previous). A decrease in the subject's PD-L1 level in a subsequent sample compared to the pre-administration level indicates that the administered PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent is effective in lowering the subject's lipid levels.
本發明方法的某些實施方案包括調整治療,所述治療包括向受試者施用本發明的dsRNA藥劑或PD-L1反義多核苷酸藥劑,這至少部分基於對受試者因治療導致的PD-L1相關疾病或病症的一種或多種生理特徵的變化的評估。例如,在本發明的一些實施方案中,可以確定施用的本發明的dsRNA藥劑或PD-L1反義多核苷酸藥劑對受試者的影響,並將其用於幫助調整隨後向受試者施用的本發明的dsRNA藥劑或PD-L1反義多核苷酸藥劑的量。在一個非限制性實例中,向受試者施用本發明的dsRNA藥劑或PD-L1反義多核苷酸藥劑,在施用後測定受試者的PD-L1水平,並且至少部分地基於所測定的水平,確定需要更大量的dsRNA藥劑或PD-L1反義多核苷酸藥劑以增加所施用藥劑的生理效應,例如降低或進一步降低受試者的PD-L1水平。在另一個非限制性實例中,向受試者施用本發明的dsRNA藥劑或PD-L1反義多核苷酸藥劑,在施用後測定受試者的PD-L1水平,並且至少部分地基於所測定的水平,需要向受試者施用較低量的dsRNA藥劑或PD-L1反義多核苷酸藥劑。Certain embodiments of the methods of the invention include modulating treatment comprising administering a dsRNA agent or PD-L1 antisense polynucleotide agent of the invention to a subject, based at least in part on an assessment of changes in one or more physiological characteristics of a PD-L1-related disease or condition in the subject resulting from the treatment. For example, in some embodiments of the invention, the effect of an administered dsRNA agent or PD-L1 antisense polynucleotide agent of the invention on a subject can be determined and used to help adjust the amount of the dsRNA agent or PD-L1 antisense polynucleotide agent of the invention subsequently administered to the subject. In one non-limiting example, a dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention is administered to a subject, the subject's PD-L1 level is determined after administration, and based at least in part on the determined level, it is determined that a larger amount of the dsRNA agent or PD-L1 antisense polynucleotide agent is needed to increase the physiological effect of the administered agent, such as to reduce or further reduce the subject's PD-L1 level. In another non-limiting example, a dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention is administered to a subject, the subject's PD-L1 level is determined after administration, and based at least in part on the determined level, a lower amount of the dsRNA agent or PD-L1 antisense polynucleotide agent needs to be administered to the subject.
因此,本發明的一些實施方案包括評估受試者先前治療導致的一種或多種生理特徵的變化,以調整隨後向受試者施用的本發明的 dsRNA藥劑或PD-L1反義多核苷酸藥劑的量。本發明的方法的一些實施方案包括 1、2、3、4、5、6 或更多次PD-L1相關疾病或病症的生理特徵測定,以評估和/或監測施用的本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的功效,並且任選地使用這些測定來調整以下一項或多項:本發明的 dsRNA藥劑或PD-L1反義多核苷酸藥劑的劑量、施用方案和/或施用頻率,以治療受試者的PD-L1相關疾病或病症。在本發明的一些實施方案中,向受試者施用有效量的本發明的dsRNA劑或PD-L1反義多核苷酸劑的期望結果是受試者的PD-L1 mRNA水平降低、受試者中的PD-L1蛋白水平降低,或PD-L1表達的減少通過以下方面來間接評估:通過測量受試者樣品(例如,血清樣品)中的PD-L1生物活性的降低或PD-L1水平來評估,通過測量傳染原中存在的蛋白質、核酸或碳水化合物的減少來評估,通過評估針對傳染源的抗體或免疫細胞來免疫反應來評估,通過一種或多種感染體徵或症狀(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來評估,通過測量受試者血清中的乙肝抗原(HBsAg)、HBeAg或HB cccDNA的水平來評估,通過檢測受試者的抗HBsAg抗體水平來評估。Therefore, some embodiments of the present invention include evaluating changes in one or more physiological characteristics of a subject caused by a previous treatment to adjust the amount of the dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention subsequently administered to the subject. Some embodiments of the methods of the present invention include 1, 2, 3, 4, 5, 6 or more PD-L1 related disease or disorder physiological characteristic measurements to evaluate and/or monitor the efficacy of the administered PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent, and optionally use these measurements to adjust one or more of the following: the dosage, administration regimen and/or administration frequency of the dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention to treat the PD-L1 related disease or disorder in the subject. In some embodiments of the present invention, the desired result of administering an effective amount of the dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention to a subject is to reduce the PD-L1 level in the subject. A decrease in mRNA levels, a decrease in PD-L1 protein levels in a subject, or a decrease in PD-L1 expression is assessed indirectly by measuring a decrease in PD-L1 biological activity or PD-L1 levels in a sample from the subject (e.g., a serum sample), by measuring a decrease in proteins, nucleic acids, or carbohydrates present in an infectious agent, by assessing an immune response to antibodies or immune cells directed against an infectious agent, by a decrease in one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by measuring the level of hepatitis B antigen (HBsAg), HBeAg, or HB cccDNA in the subject's serum, or by detecting the subject's anti-HBsAg antibody level.
如本文所用,當針對PD-L1相關疾病或病症使用時,術語“治療”或“已治療”或“正在治療”可以指降低受試者罹患PD-L1相關疾病或病症的可能性的預防性治療,也可以指在受試者罹患PD-L1相關疾病或病症之後進行的治療,以消除或降低PD-L1相關疾病或病症的水平、防止PD-L1相關疾病或病症變得更晚期(例如,更嚴重)和/或與未接受治療的受試者相比減緩受試者中PD-L1相關疾病或病症的進展,從而降低受試者中PD-L1多肽的活性。As used herein, when used with respect to a PD-L1-related disease or disorder, the term "treatment" or "treated" or "being treated" may refer to preventive treatment that reduces the likelihood of a subject developing a PD-L1-related disease or disorder, or may refer to treatment performed after a subject has developed a PD-L1-related disease or disorder to eliminate or reduce the level of a PD-L1-related disease or disorder, prevent the PD-L1-related disease or disorder from becoming more advanced (e.g., more severe) and/or slow down the progression of a PD-L1-related disease or disorder in a subject compared to a subject who has not received treatment, thereby reducing the activity of a PD-L1 polypeptide in the subject.
本發明的藥劑、組合物和方法的某些實施方案可用於抑制PD-L1基因表達。本文中關於PD-L1基因表達所用的術語“抑制”、“沉默”、“降低”、“下調”和“敲減”是指分別與對照的PD-L1基因轉錄的RNA水平、表達的PD-L1活性水平或從mRNA翻譯的PD-L1水平相比,當細胞、細胞組、組織、器官或受試者與本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑接觸(例如,用其處理)時,PD-L1基因的表達降低,所述表達在轉錄PD-L1基因的細胞、細胞組、組織、器官或受試者中通過以下一種或更多種來測量:從基因轉錄的RNA水平、表達的PD-L1活性水平和從mRNA翻譯的PD-L1多肽、蛋白質或蛋白質亞基的水平。在一些實施方案中,對照水平是未與PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑接觸(例如,用其治療)的細胞、組織、器官或受試者中的水平。 給藥方法 Certain embodiments of the agents, compositions and methods of the present invention can be used to inhibit PD-L1 gene expression. The terms "inhibit", "silencing", "reducing", "downregulating" and "knockdown" used herein with respect to PD-L1 gene expression refer to that when a cell, cell group, tissue, organ or subject is contacted with (e.g., treated with) the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention, the expression of the PD-L1 gene is reduced, as measured by one or more of the following in a cell, cell group, tissue, organ or subject that transcribes the PD-L1 gene: the level of RNA transcribed from the gene, the level of PD-L1 activity expressed, and the level of PD-L1 polypeptide, protein or protein subunit translated from mRNA, respectively, compared to the level of RNA transcribed from a control PD-L1 gene, the level of PD-L1 activity expressed, or the level of PD-L1 translated from mRNA. In some embodiments, the control level is the level in a cell, tissue, organ, or subject that has not been contacted with (e.g., treated with) a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent .
PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的多種給藥途徑可用於本發明的方法。所選的具體給藥方式至少部分取決於所治療的具體病症和達到治療效果所需的劑量。一般而言,本發明的方法可使用醫學上可接受的任何給藥方式來實施,即任何產生有效水平的PD-L1相關疾病或病症的治療而不引起臨床上不可接受的不良反應的方式。在本發明的一些實施方案中,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可通過口服、腸內、黏膜、皮下和/或腸外途徑給藥。術語“腸外”包括皮下、靜脈內、鞘內、肌肉內、腹膜內和胸骨內注射或輸注技術。其他途徑包括但不限於鼻腔(例如,通過胃鼻管)、皮膚、陰道、直腸、舌下和吸入。本發明的遞送途徑可以包括鞘內、腦室內或顱內。在本發明的一些實施方案中, PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以放置在緩釋基質中,並通過將基質放置在受試者體內來施用。在本發明的一些方面,可以使用塗有靶向特定細胞或細胞器的遞送劑的奈米顆粒將PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑遞送至受試者細胞。本領域已知各種遞送手段、方法、藥劑。本文其他地方還提供了遞送方法和遞送劑的非限制性示例。在本發明的一些方面,關於PD-L1 dsRNA劑或PD-L1反義多核苷酸劑的術語“遞送”可以指向細胞或受試者施用一種或多種“裸露的” PD-L1 dsRNA劑或PD-L1反義多核苷酸劑序列,並且在本發明的某些方面,“遞送”指經由轉染手段向細胞或受試者施用、向受試者遞送包含PD-L1 dsRNA劑或PD-L1反義多核苷酸劑的細胞、向細胞和/或受試者遞送編碼PD-L1 dsRNA劑或PD-L1反義多核苷酸劑的載體等。使用轉染手段遞送PD-L1 dsRNA劑或PD-L1反義多核苷酸劑可以包括向細胞和/或受試者施用載體。A variety of routes of administration of PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents can be used in the methods of the present invention. The specific mode of administration selected depends at least in part on the specific condition being treated and the dose required to achieve the therapeutic effect. In general, the methods of the present invention can be implemented using any medically acceptable mode of administration, i.e., any mode that produces an effective level of treatment for a PD-L1-related disease or condition without causing clinically unacceptable adverse reactions. In some embodiments of the present invention, PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents can be administered orally, enterally, mucosally, subcutaneously and/or parenterally. The term "parenteral" includes subcutaneous, intravenous, intrathecal, intramuscular, intraperitoneal and intrasternal injection or infusion techniques. Other routes include, but are not limited to, nasal (e.g., through a gastric nasal tube), skin, vagina, rectum, sublingual, and inhalation. The delivery route of the present invention may include intrathecal, intraventricular, or intracranial. In some embodiments of the present invention, a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent may be placed in a sustained-release matrix and administered by placing the matrix in the subject. In some aspects of the present invention, nanoparticles coated with a delivery agent targeting specific cells or organelles may be used to deliver a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to a subject's cells. Various delivery means, methods, and agents are known in the art. Non-limiting examples of delivery methods and delivery agents are also provided elsewhere herein. In some aspects of the present invention, the term "delivery" with respect to a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent may refer to the administration of one or more "naked" PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent sequences to a cell or a subject, and in certain aspects of the present invention, "delivery" refers to administration to a cell or a subject via transfection means, delivery of cells comprising a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to a subject, delivery of a vector encoding a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to a cell and/or a subject, etc. Delivery of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent using transfection means may include administering a vector to a cell and/or a subject.
在本發明的一些方法中,一種或多種PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以以製劑形式施用,所述製劑可以以藥學上可接受的溶液形式施用,所述溶液通常可以含有藥學上可接受濃度的鹽、緩衝劑、防腐劑、相容載體、佐劑和任選的其他治療成分。在本發明的一些實施方案中,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以與另一種治療劑一起配製以同時施用。根據本發明的方法,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以以藥物組合物形式施用。通常,藥物組合物包含PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑和任選的藥學上可接受的載體。藥學上可接受的載體是本領域普通技術人員所熟知的。如本文所用,藥學上可接受的載體是指不干擾活性成分的生物活性的有效性(例如,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑抑制細胞或受試者中PD-L1基因表達的能力)的無毒材料。本領域已知多種用於治療用途的dsRNA藥劑或PD-L1反義多核苷酸藥劑的給藥和遞送方法,並且可用於本發明的方法中。In some methods of the invention, one or more PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents may be administered in a formulation that may be administered in a pharmaceutically acceptable solution, which may generally contain pharmaceutically acceptable concentrations of salt, buffers, preservatives, compatible carriers, adjuvants, and optional other therapeutic ingredients. In some embodiments of the invention, PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents may be formulated with another therapeutic agent for simultaneous administration. According to the methods of the invention, PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents may be administered in the form of a pharmaceutical composition. Typically, the pharmaceutical composition comprises a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent and an optional pharmaceutically acceptable carrier. Pharmaceutically acceptable carriers are well known to those of ordinary skill in the art. As used herein, a pharmaceutically acceptable carrier refers to a non-toxic material that does not interfere with the effectiveness of the biological activity of the active ingredient (e.g., the ability of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent to inhibit PD-L1 gene expression in a cell or subject). A variety of methods for administering and delivering dsRNA agents or PD-L1 antisense polynucleotide agents for therapeutic use are known in the art and can be used in the methods of the present invention.
藥學上可接受的載體包括稀釋劑、填充劑、鹽、緩衝劑、穩定劑、增溶劑和本領域中眾所周知的其他材料。示例性的藥學上可接受的載體在美國專利號 5,211,657 中描述,並且本領域技術人員已知的其他載體。此類製劑通常可含有鹽、緩衝劑、防腐劑、相容性載體和任選的其他治療劑。當用於藥物中時,鹽應該是藥學上可接受的,但非藥學上可接受的鹽可方便地用於製備其藥學上可接受的鹽,並且不排除在本發明的範圍之外。此類藥理學和藥學上可接受的鹽包括但不限於由以下酸製備的鹽:鹽酸、氫溴酸、硫酸、硝酸、磷酸、馬來酸、乙酸、水楊酸、檸檬酸、甲酸、丙二酸、琥珀酸等。此外,藥學上可接受的鹽可以製備為鹼金屬或鹼土鹽,例如鈉鹽、鉀鹽或鈣鹽。Pharmaceutically acceptable carriers include diluents, fillers, salts, buffers, stabilizers, solubilizers, and other materials well known in the art. Exemplary pharmaceutically acceptable carriers are described in U.S. Patent No. 5,211,657, and other carriers known to those skilled in the art. Such formulations may generally contain salts, buffers, preservatives, compatible carriers, and optional other therapeutic agents. When used in a drug, the salt should be pharmaceutically acceptable, but non-pharmaceutically acceptable salts may be conveniently used to prepare pharmaceutically acceptable salts thereof and are not excluded from the scope of the present invention. Such pharmacologically and pharmaceutically acceptable salts include, but are not limited to, salts prepared from the following acids: hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, maleic acid, acetic acid, salicylic acid, citric acid, formic acid, malonic acid, succinic acid, etc. In addition, pharmaceutically acceptable salts can be prepared as alkaline metal or alkaline earth salts, such as sodium salts, potassium salts or calcium salts.
本發明的方法的一些實施方案包括將一種或多種PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑直接施用至組織。在某些實施方案中,施用化合物的組織是存在或可能出現PD-L1相關疾病或病症的組織,其非限制性實例是肝臟。直接組織施用可通過直接注射或其他方式實現。許多口服遞送的化合物自然地到達並穿過肝臟和腎臟,本發明的治療方法的一些實施方案包括向受試者口服施用一種或多種PD-L1 dsRNA藥劑。PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑,無論是單獨施用還是與其他治療劑聯合施用,都可以施用一次,或者可以分多次施用。如果多次施用,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以通過不同的途徑施用。例如,儘管並非旨在限制,第一次(或前幾次)給藥可以通過皮下方式進行,並且一次或多次額外給藥可以是口服和/或全身給藥。Some embodiments of the methods of the present invention include administering one or more PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents directly to a tissue. In certain embodiments, the tissue to which the compound is administered is a tissue in which a PD-L1-related disease or condition exists or may occur, a non-limiting example of which is the liver. Direct tissue administration can be achieved by direct injection or other means. Many orally delivered compounds naturally reach and pass through the liver and kidneys, and some embodiments of the treatment methods of the present invention include orally administering one or more PD-L1 dsRNA agents to a subject. PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents, whether administered alone or in combination with other therapeutic agents, can be administered once, or can be administered multiple times. If multiple administrations are given, the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent may be administered by different routes. For example, although not intended to be limiting, the first (or first few) administrations may be subcutaneous, and one or more additional administrations may be oral and/or systemic.
對於本發明的實施方案,其中希望全身性地施用PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可以配製用於通過注射進行腸胃外施用,例如通過推注或持續輸注。注射製劑可以以單位劑量形式存在,例如在安瓿瓶或多劑量容器中,添加或不添加防腐劑。PD-L1 dsRNA藥劑製劑(也稱為藥物組合物)可以採用油性或水性載體中的懸浮液、溶液或乳液等形式,並且可以含有配製劑,例如懸浮劑、穩定劑和/或分散劑。For embodiments of the invention in which it is desired to administer the PD-L1 dsRNA agent or the PD-L1 antisense polynucleotide agent systemically, the PD-L1 dsRNA agent or the PD-L1 antisense polynucleotide agent can be formulated for parenteral administration by injection, such as by bolus injection or continuous infusion. Injectable formulations can be in unit dose form, such as in ampoules or multi-dose containers, with or without added preservatives. The PD-L1 dsRNA agent formulation (also referred to as a pharmaceutical composition) can be in the form of a suspension, solution or emulsion in an oily or aqueous vehicle, and can contain a formulation agent, such as a suspending agent, a stabilizer and/or a dispersing agent.
用於腸外給藥的製劑包括無菌水性或非水性溶液、懸浮液和乳劑。非水性溶劑的例子有丙二醇、聚乙二醇、植物油(如橄欖油)和可注射有機酯(如油酸乙酯)。水性載體包括水、醇/水性溶液、乳劑或懸浮液,包括鹽水和緩衝介質。腸外載體包括氯化鈉溶液、林格氏葡萄糖、葡萄糖和氯化鈉、乳酸林格氏溶液或不揮發性油。靜脈內載體包括液體和營養補充劑、電解質補充劑(如基於林格氏葡萄糖的補充劑)等。還可以存在防腐劑和其他添加劑,例如抗菌劑、抗氧化劑、螯合劑和惰性氣體等。其他給藥形式(如靜脈內給藥)的劑量會較低。如果受試者在初始劑量下反應不足,則可在患者耐受範圍內使用更高劑量(或通過不同的、更局部的遞送途徑有效地提高施用劑量)。可根據需要每天使用多劑量,以達到一種或多種 PD -L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的適當全身或局部水平,並實現PD-L1蛋白活性的適當降低。Preparations for parenteral administration include sterile aqueous or non-aqueous solutions, suspensions and emulsions. Examples of non-aqueous solvents include propylene glycol, polyethylene glycol, vegetable oils (such as olive oil) and injectable organic esters (such as ethyl oleate). Aqueous carriers include water, alcohol/aqueous solutions, emulsions or suspensions, including saline and buffered media. Parenteral carriers include sodium chloride solution, Ringer's dextrose, dextrose and sodium chloride, lactated Ringer's solution or non-volatile oils. Intravenous carriers include liquids and nutritional supplements, electrolyte supplements (such as supplements based on Ringer's dextrose), etc. Preservatives and other additives may also be present, such as antimicrobial agents, antioxidants, chelating agents, and inert gases. Other forms of administration (such as intravenous administration) will have lower doses. If the subject does not respond adequately to the initial dose, a higher dose may be used within the patient's tolerance range (or the dose may be effectively increased by a different, more localized delivery route). Multiple doses may be used daily as needed to achieve appropriate systemic or local levels of one or more PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents and to achieve an appropriate reduction in PD-L1 protein activity.
在其它實施例中,本發明的方法包括使用遞送載體,例如適合植入接受者(例如受試者)的生物相容性微粒、奈米顆粒或植入物。根據該方法可能有用的示例性生物可蝕性植入物在 PCT 公開號 WO 95/24929(通過引用併入本文)中進行了描述,該公開號描述了用於容納生物大分子的生物相容性、生物可降解的聚合物基質。In other embodiments, the methods of the invention include the use of a delivery vehicle, such as a biocompatible microparticle, nanoparticle, or implant suitable for implantation into a recipient, such as a subject. Exemplary bioerodible implants that may be useful according to the methods are described in PCT Publication No. WO 95/24929 (incorporated herein by reference), which describes a biocompatible, biodegradable polymer matrix for containing biomacromolecules.
本發明的方法中,可以使用不可生物降解和可生物降解的聚合物基質來將一種或多種PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑遞送至受試者。在某些實施方案中,基質可以是可生物降解的。基質聚合物可以是天然或合成聚合物。可以根據需要釋放的時間段來選擇聚合物,通常為幾小時到一年或更長時間。通常,可以使用幾小時到三到十二個月之間的一段時間內的釋放。聚合物可選地為水凝膠的形式,其可以吸收高達其重量的約90%的水,並且進一步可選地與多價離子或其他聚合物交聯。In the methods of the present invention, non-biodegradable and biodegradable polymer matrices can be used to deliver one or more PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents to a subject. In certain embodiments, the matrix can be biodegradable. The matrix polymer can be a natural or synthetic polymer. The polymer can be selected based on the time period over which release is required, typically from a few hours to a year or more. Typically, release over a period of time between a few hours and three to twelve months can be used. The polymer is optionally in the form of a hydrogel that can absorb up to about 90% of its weight in water and is further optionally cross-linked with multivalent ions or other polymers.
一般而言,在本發明的一些實施方案中,PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑可使用生物可蝕性植入物通過擴散或通過聚合物基質的降解來遞送。用於此類用途的示例性合成聚合物在本領域中是眾所周知的。生物可降解聚合物和生物不可降解聚合物可用於使用本領域已知的方法遞送PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑。生物黏附性聚合物如生物可蝕性水凝膠(參見H. S. Sawhney, C. P. Pathak and J. A. Hubell in Macromolecules, 1993, 26, 581-587,其教導通過引用併入本文)也可用於遞送PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑以治療PD-L1相關疾病或病症。其他合適的遞送系統可以包括緩釋、延遲釋放或持續釋放遞送系統。此類系統可以避免重複施用PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑,從而為受試者和醫療保健專業人員增加便利性。許多類型的釋放遞送系統可供本領域普通技術人員使用和瞭解。(參見例如:美國專利號 5,075,109;4,452,775;4,675,189;5,736,152;3,854,480;5,133,974;和 5,407,686(每個專利的教導均通過引用併入本文)。此外,可以使用基於泵的硬件遞送系統,其中一些適用於植入。In general, in some embodiments of the invention, PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents can be delivered by diffusion or by degradation of a polymer matrix using a bioerodible implant. Exemplary synthetic polymers for such uses are well known in the art. Biodegradable polymers and non-biodegradable polymers can be used to deliver PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents using methods known in the art. Bioadhesive polymers such as bioerodible hydrogels (see H. S. Sawhney, C. P. Pathak and J. A. Hubell in Macromolecules, 1993, 26, 581-587, the teachings of which are incorporated herein by reference) can also be used to deliver PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents to treat PD-L1 related diseases or conditions. Other suitable delivery systems may include slow release, delayed release, or sustained release delivery systems. Such systems can avoid repeated administration of PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents, thereby increasing convenience for subjects and healthcare professionals. Many types of release delivery systems are available and understood by those of ordinary skill in the art. (See, e.g., U.S. Patent Nos. 5,075,109; 4,452,775; 4,675,189; 5,736,152; 3,854,480; 5,133,974; and 5,407,686 (the teachings of each of which are incorporated herein by reference). In addition, pump-based hardware delivery systems may be used, some of which are suitable for implantation.
使用長期緩釋植入物可能適合於對受試者進行預防性治療,也適合於有患復發性PD-L1相關疾病或病症風險的受試者。本文所用的長期釋放是指植入物的構造和佈置能夠在至少長達10天、20天、30天、60天、90天、六個月、一年或更長時間內持續遞送治療水平的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑。長期緩釋植入物是本領域普通技術人員所熟知的,包括上述一些釋放系統。The use of long-term sustained release implants may be appropriate for preventive treatment of subjects and for subjects at risk for recurrent PD-L1-related diseases or conditions. As used herein, long-term release refers to the construction and arrangement of the implant to continuously deliver therapeutic levels of PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents for at least 10 days, 20 days, 30 days, 60 days, 90 days, six months, a year or more. Long-term sustained release implants are well known to those of ordinary skill in the art and include some of the release systems described above.
PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的治療製劑可通過將具有所需純度的分子或化合物與可選的藥學上可接受的載體、賦形劑或穩定劑混合來製備,以凍乾製劑或水溶液的形式儲存[Remington's Pharmaceutical Sciences第21版,(2006)]。可接受的載體、賦形劑或穩定劑在所採用的劑量和濃度下對接受者無毒,包括緩衝劑,例如磷酸鹽、檸檬酸鹽和其他有機酸;抗氧化劑,包括抗壞血酸和蛋氨酸;防腐劑(例如十八烷基二甲基苄基氯化銨;六甲氯銨;苯紮氯銨、苄索氯銨;苯酚、丁醇或苄醇;烷基對羥基苯甲酸酯例如甲基或丙基對羥基苯甲酸酯;兒茶酚;間苯二酚;環己醇;3-戊醇;和間甲酚);低分子量(少於約10個殘基)多肽;蛋白質,例如血清白蛋白、明膠或免疫球蛋白;親水性聚合物例如聚乙烯吡咯烷酮;氨基酸例如甘氨酸、穀氨醯胺、天冬醯胺、組氨酸、精氨酸或賴氨酸;單糖、二糖和其他碳水化合物,包括葡萄糖、甘露糖或糊精;螯合劑例如EDTA;糖例如蔗糖、甘露醇、海藻糖或山梨糖醇;成鹽的反離子例如鈉;金屬複合物(例如,Zn-蛋白質複合物);和/或非離子表面活性劑,例如 TWEEN ®、PLURONICS ®或聚乙二醇(PEG)。 細胞、受試者和對照 Therapeutic preparations of PD-L1 dsRNA agents or PD-L1 antisense polynucleotide agents can be prepared by mixing a molecule or compound having the desired purity with an optional pharmaceutically acceptable carrier, excipient or stabilizer, and stored in the form of a lyophilized preparation or an aqueous solution [Remington's Pharmaceutical Sciences 21st edition, (2006)]. Acceptable carriers, excipients or stabilizers are nontoxic to recipients at the dosages and concentrations employed, and include buffers such as phosphates, citrates and other organic acids; antioxidants including ascorbic acid and methionine; preservatives (e.g., octadecyldimethylbenzylammonium chloride; hexamethylammonium chloride; benzoammonium chloride, benzethonium chloride; phenol, butyl or benzyl alcohol; alkyl parabens such as methyl or propyl parabens; catechol; resorcinol; cyclohexanol; 3-pentanol; and m-cresol); low molecular weight (less than about 10 residues) polypeptides; proteins such as serum albumin, gelatin, or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino acids such as glycine, glutamine, asparagine, histidine, arginine, or lysine; monosaccharides, disaccharides, and other carbohydrates, including glucose, mannose, or dextrins; chelating agents such as EDTA; sugars such as sucrose, mannitol, trehalose, or sorbitol; salt-forming counterions such as sodium; metal complexes (e.g., Zn-protein complexes); and/or nonionic surfactants such as TWEEN ® , PLURONICS ® , or polyethylene glycol (PEG). Cells, subjects, and controls
本發明的方法可與細胞、組織、器官和/或受試者一起使用。在本發明的一些方面,受試者是人類或脊椎動物哺乳動物,包括但不限於狗、貓、馬、牛、山羊、小鼠、大鼠和靈長類動物,例如猴子。因此,本發明可用於治療人類和非人類受試者的PD-L1相關疾病或病症。在本發明的一些方面,受試者可以是農場動物、動物園動物、家養動物或非家養動物,並且本發明的方法可用於獸醫預防和治療方案。在本發明的一些實施方案中,受試者是人類,並且本發明的方法可用於人類預防和治療方案。The methods of the present invention can be used with cells, tissues, organs and/or subjects. In some aspects of the present invention, the subject is a human or a vertebrate mammal, including but not limited to dogs, cats, horses, cows, goats, mice, rats, and primates, such as monkeys. Therefore, the present invention can be used to treat PD-L1-related diseases or conditions in human and non-human subjects. In some aspects of the present invention, the subject can be a farm animal, a zoo animal, a domestic animal, or a non-domestic animal, and the methods of the present invention can be used in veterinary prevention and treatment programs. In some embodiments of the present invention, the subject is a human, and the methods of the present invention can be used in human prevention and treatment programs.
可應用本發明的受試者的非限制性實例是被診斷患有、懷疑患有或有風險患有與以下疾病或病症相關的疾病或病症的受試者:高於期望的PD-L1表達和/或活性,也稱為“升高的PD-L1表達水平”。與高於期望的PD-L1表達和/或活性相關的疾病和病症的非限制性實例在本文其他地方描述。本發明的方法可應用於在治療時被診斷患有與高於期望的PD-L1表達和/或活性相關的疾病或病症的受試者,或被認為有患上或發展與高於期望的PD-L1表達和/或活性相關的疾病或病症的風險的受試者。在本發明的一些方面,與高於期望的PD-L1表達水平和/或活性相關的疾病或病症是急性疾病或病症,而在本發明的某些方面,與高於期望的PD-L1表達水平和/或活性相關的疾病或病症是慢性疾病或病症。Non-limiting examples of subjects to which the present invention may be applied are subjects diagnosed with, suspected of having, or at risk of having a disease or condition associated with: higher than desired PD-L1 expression and/or activity, also referred to as "elevated PD-L1 expression levels". Non-limiting examples of diseases and conditions associated with higher than desired PD-L1 expression and/or activity are described elsewhere herein. The methods of the present invention may be applied to subjects diagnosed with a disease or condition associated with higher than desired PD-L1 expression and/or activity at the time of treatment, or subjects believed to be at risk of having or developing a disease or condition associated with higher than desired PD-L1 expression and/or activity. In some aspects of the invention, the disease or condition associated with higher than desired PD-L1 expression levels and/or activity is an acute disease or condition, while in certain aspects of the invention, the disease or condition associated with higher than desired PD-L1 expression levels and/or activity is a chronic disease or condition.
可應用本發明方法的細胞包括 體外、 體內、 離體細胞。細胞可存在於受試者體內、培養物中和/或懸浮液中,或處於任何其他合適的狀態或條件中。可應用本發明方法的細胞可以是肝細胞(liver cell)、肝細胞(hepatocyte)、心臟細胞、胰腺細胞、心血管細胞、腎細胞或其他類型的脊椎動物細胞,包括人類和非人類哺乳動物細胞。在本發明的某些方面,可應用本發明方法的細胞是健康的正常細胞,其未知為疾病細胞。在本發明的某些實施例中,應用本發明方法和組合物的細胞是肝細胞(liver cell)、肝細胞(hepatocyte)、心臟細胞、胰腺細胞、心血管細胞和/或腎細胞。在本發明的某些方面,對照細胞是正常細胞,但應理解患有疾病或病症的細胞在特定情況下也可用作對照細胞,例如比較患有疾病或病症的治療細胞與患有該疾病或病症的未治療細胞的結果等。 Cells to which the methods of the present invention can be applied include in vitro , in vivo , and ex vivo cells. Cells can be present in a subject, in a culture and/or in a suspension, or in any other suitable state or condition. Cells to which the methods of the present invention can be applied can be liver cells, hepatocytes, heart cells, pancreatic cells, cardiovascular cells, kidney cells, or other types of vertebrate cells, including human and non-human mammalian cells. In certain aspects of the present invention, cells to which the methods of the present invention can be applied are healthy normal cells that are not known to be disease cells. In certain embodiments of the present invention, the cells to which the methods and compositions of the present invention are applied are liver cells, hepatocytes, heart cells, pancreatic cells, cardiovascular cells and/or kidney cells. In certain aspects of the present invention, the control cells are normal cells, but it should be understood that cells with a disease or condition can also be used as control cells in certain circumstances, such as comparing the results of treated cells with a disease or condition with untreated cells with the disease or condition, etc.
根據本發明的方法,可以測定PD-L1多肽活性水平,並將其與PD-L1多肽活性的對照水平進行比較。對照可以是預定值,其可以採用多種形式。它可以是單個截止值,例如中位數或平均值。它可以基於比較組建立,例如具有正常水平的PD-L1多肽和/或PD-L1多肽活性的組和具有增加水平的PD-L1多肽和/或PD-L1多肽活性的組。比較組的另一個非限制性例子可以是具有PD-L1相關疾病或病症的一種或多種症狀或診斷的組;不具有疾病或病症的一種或多種症狀或診斷的組;已經施用本發明的siRNA治療的受試者組;未施用本發明的siRNA治療的受試者組。通常,對照可以基於適當年齡段的表面上健康的正常個體或表面上健康的細胞。應當理解,除了預定值之外,根據本發明的對照可以是與實驗材料平行測試的材料樣品。示例包括來自對照群體的樣品或通過製造產生的對照樣品,以用於與實驗樣品進行平行測試。在本發明的一些實施方案中,對照可以包括未接觸或未用本發明的PD-L1 dsRNA藥劑處理的細胞或受試者,並且在這種情況下,可以將PD-L1多肽和/或PD-L1多肽活性的對照水平與接觸本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑的細胞或受試者中的 PD-L1多肽和/或PD-L1多肽活性水平進行比較。According to the method of the present invention, the level of PD-L1 polypeptide activity can be determined and compared with a control level of PD-L1 polypeptide activity. The control can be a predetermined value, which can take a variety of forms. It can be a single cutoff value, such as a median or mean. It can be established based on a comparison group, such as a group with normal levels of PD-L1 polypeptide and/or PD-L1 polypeptide activity and a group with increased levels of PD-L1 polypeptide and/or PD-L1 polypeptide activity. Another non-limiting example of a comparison group can be a group with one or more symptoms or diagnoses of a PD-L1-related disease or condition; a group without one or more symptoms or diagnoses of a disease or condition; a group of subjects who have been treated with the siRNA of the present invention; a group of subjects who have not been treated with the siRNA of the present invention. Typically, the control may be based on apparently healthy normal individuals of appropriate age or apparently healthy cells. It should be understood that, in addition to predetermined values, the control according to the present invention may be a sample of material tested in parallel with the experimental material. Examples include samples from a control population or control samples produced by manufacturing for parallel testing with the experimental samples. In some embodiments of the present invention, the control may include cells or subjects that have not been exposed to or treated with the PD-L1 dsRNA agent of the present invention, and in this case, the control level of PD-L1 polypeptide and/or PD-L1 polypeptide activity may be compared to the PD-L1 polypeptide and/or PD-L1 polypeptide activity level in cells or subjects exposed to the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention.
在本發明的某些實施方案中,對照水平可以是為受試者確定的PD-L1多肽水平,其中將在不同時間為同一受試者確定的PD-L1多肽水平與該對照水平進行比較。在非限制性實例中,在從未接受本發明的PD-L1治療的受試者獲得的生物樣品中測定PD-L1水平。在某些實施方案中,生物樣品是血清樣品。在從受試者獲得的樣品中測定的PD-L1多肽水平可以作為受試者的基線或對照值。在本發明的治療方法中向受試者施用一次或多次PD-L1 dsRNA藥劑後,可以從受試者獲得一個或多個另外的血清樣品,並且可以將後續樣品中的PD-L1多肽水平與受試者的對照/基線水平進行比較。這種比較可用於評估受試者中PD-L1相關疾病或病症的發作、進展或消退。例如,從受試者獲得的基線樣本中的PD-L1多肽水平高於在向同一受試者施用本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑後從該受試者獲得的水平,表明PD-L1相關疾病或狀況有所消退,並且表明施用的本發明的PD-L1 dsRNA藥劑對於治療PD-L1相關疾病或狀況有效。In certain embodiments of the present invention, the control level can be a PD-L1 polypeptide level determined for a subject, wherein the PD-L1 polypeptide level determined for the same subject at different times is compared to the control level. In a non-limiting example, the PD-L1 level is measured in a biological sample obtained from a subject who has not received the PD-L1 treatment of the present invention. In certain embodiments, the biological sample is a serum sample. The PD-L1 polypeptide level measured in the sample obtained from the subject can serve as a baseline or control value for the subject. After administering one or more PD-L1 dsRNA agents to a subject in the treatment methods of the present invention, one or more additional serum samples can be obtained from the subject, and the PD-L1 polypeptide level in the subsequent sample can be compared to the control/baseline level of the subject. Such a comparison can be used to assess the onset, progression or regression of a PD-L1-related disease or condition in a subject. For example, a PD-L1 polypeptide level in a baseline sample obtained from a subject is higher than the level obtained from the subject after administration of a PD-L1 dsRNA agent or a PD-L1 antisense polynucleotide agent of the present invention to the same subject, indicating that the PD-L1-related disease or condition has regressed, and indicating that the administered PD-L1 dsRNA agent of the present invention is effective for treating the PD-L1-related disease or condition.
在本發明的某些方面,PD-L1多肽水平和/或PD-L1多肽活性的值可用作稍後在同一受試者中比較PD-L1多肽水平和/或PD-L1活性的對照值,從而允許評估受試者中相對於“基線” PD-L1多肽活性的變化。因此,受試者中可能存在和/或確定初始PD-L1多肽水平和/或初始PD-L1多肽活性水平,並且本發明的方法和化合物可用於降低受試者中PD-L1多肽和/或PD-L1多肽活性的水平,其中初始水平用作該受試者的對照水平。In certain aspects of the invention, the value of PD-L1 polypeptide level and/or PD-L1 polypeptide activity can be used as a control value to which PD-L1 polypeptide level and/or PD-L1 activity can be compared later in the same subject, thereby allowing assessment of changes in the subject relative to a "baseline" PD-L1 polypeptide activity. Thus, an initial PD-L1 polypeptide level and/or initial PD-L1 polypeptide activity level may be present and/or determined in a subject, and the methods and compounds of the invention can be used to reduce the level of PD-L1 polypeptide and/or PD-L1 polypeptide activity in a subject, wherein the initial level is used as a control level for that subject.
使用本發明的方法,可將本發明的PD-L1 dsRNA藥劑和/或PD-L1反義多核苷酸藥劑施用於受試者。當與在先前時間點從受試者獲得的血清樣本中的 PD-L1多肽的給藥前水平相比,或與非接觸對照水平(例如對照血清樣本中的PD-L1多肽水平)相比,從受試者獲得的血清樣本中的PD-L1多肽水平降低至少 0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80%、90%、95% 或更多時,可以評估本發明的給藥和治療的有效性。應理解,PD-L1 多肽的水平和PD-L1多肽活性的水平都與PD-L1基因表達的水平相關。本發明方法的某些實施方案包括向受試者施用有效量的本發明的PD-L1 dsRNA和/或PD-L1反義劑以抑制PD-L1基因表達並從而降低受試者的PD-L1多肽水平並降低PD-L1多肽活性水平。Using the methods of the present invention, the PD-L1 dsRNA agent and/or the PD-L1 antisense polynucleotide agent of the present invention can be administered to a subject. When the level of PD-L1 polypeptide in a serum sample obtained from a subject is reduced by at least 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95% or more compared to the pre-administration level of PD-L1 polypeptide in a serum sample obtained from the subject at a previous time point, or compared to a non-contact control level (e.g., the level of PD-L1 polypeptide in a control serum sample), the effectiveness of the administration and treatment of the present invention can be assessed. It should be understood that both the level of PD-L1 polypeptide and the level of PD-L1 polypeptide activity are related to the level of PD-L1 gene expression. Certain embodiments of the methods of the present invention include administering to a subject an effective amount of the PD-L1 dsRNA and/or PD-L1 antisense of the present invention to inhibit PD-L1 gene expression and thereby reduce the subject's PD-L1 polypeptide level and PD-L1 polypeptide activity level.
本發明的某些實施方案,包括從一種或多種受試者中獲得的一種或多種生物樣品中確定PD-L1多肽的存在、不存在和/或量(本文中也稱為水平)。該確定可用於評估本發明的治療方法的有效性。例如,本發明的方法和組合物可用於確定從先前用本發明的PD-L1 dsRNA藥劑和/或PD-L1反義藥劑治療的受試者獲得的生物樣品中的PD- L1多肽水平。從治療的受試者獲得的血清樣品中測定的PD-L1多肽水平與為受試者確定的治療前PD-L1多肽水平相比或與非接觸對照生物樣品水平相比低至少0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80%、90%、95%或更多,表明給予受試者的治療的功效的水平。Certain embodiments of the present invention include determining the presence, absence, and/or amount (also referred to herein as level) of a PD-L1 polypeptide in one or more biological samples obtained from one or more subjects. This determination can be used to assess the effectiveness of the treatment methods of the present invention. For example, the methods and compositions of the present invention can be used to determine the level of a PD-L1 polypeptide in a biological sample obtained from a subject previously treated with a PD-L1 dsRNA agent and/or a PD-L1 antisense agent of the present invention. A level of PD-L1 polypeptide measured in a serum sample obtained from a treated subject that is at least 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95% or more lower than the pre-treatment PD-L1 polypeptide level determined for the subject or compared to the level in an uncontacted control biological sample indicates a level of efficacy of the treatment administered to the subject.
在本發明的一些實施方案中,針對受試者確定的PD-L1相關疾病或狀況的生理特徵可以作為對照結果,並將同一受試者在不同時間的生理特徵的確定結果與對照結果進行比較。在非限制性例子中,生理特徵如受試者的PD-L1 mRNA水平、 PD-L1蛋白水平,PD-L1表達的減少通過以下方面來間接評估:通過測量受試者樣品(例如,血清樣品)中的PD-L1生物活性的降低或PD-L1水平來評估,通過測量傳染原中存在的蛋白質、核酸或碳水化合物的減少來評估,通過評估針對傳染源的抗體或免疫細胞來免疫反應來評估,通過一種或多種感染體徵或症狀(例如發燒、疼痛、噁心、嘔吐、血液化學異常、體重減輕)的減少來評估,通過測量受試者血清中的乙肝抗原(HBsAg)、HBeAg或HB cccDNA的水平來評估,通過檢測受試者的抗HBsAg抗體水平來評估,通過檢測受試者或血漿或組織樣本中的抗HBsAg抗體水平來評估,該抗體水平是在從未接受本發明的PD-L1治療的受試者獲得的生物樣本(例如血清樣本)中確定的基準。從受試者獲得的樣本中確定的PD-L1 mRNA水平(和/或PD-L1疾病或病症的其他生理特徵)可用作受試者的基線或對照值。在本發明的治療方法中向受試者施用一次或多次PD-L1 dsRNA藥劑後,可從受試者獲得一個或多個額外的血清樣本,並將後續樣本中的PD-L1 mRNA 水平和/或PD-L1蛋白水平分別與受試者的對照/基線水平和/或比率進行比較。此類比較可用於評估受試者中PD-L1相關疾病或病症的發作、進展或消退。例如,從受試者獲得的基線樣本中的PD-L1 mRNA水平高於在向同一受試者施用本發明的PD-L1 dsRNA藥劑或PD-L1反義多核苷酸藥劑後從該受試者獲得的樣本中測定的PD-L1 mRNA水平,表明PD-L1相關疾病或狀況有所消退,並且表明施用的本發明的PD-L1 dsRNA藥劑對於治療PD-L1相關疾病或狀況有效。In some embodiments of the present invention, the physiological characteristics of a PD-L1-related disease or condition determined for a subject can be used as a control result, and the results of the determination of the physiological characteristics of the same subject at different times can be compared with the control results. In non-limiting examples, physiological characteristics such as PD-L1 mRNA levels, PD-L1 protein levels in a subject, a decrease in PD-L1 expression is assessed indirectly by measuring a decrease in PD-L1 biological activity or PD-L1 levels in a sample (e.g., a serum sample) from the subject, by measuring a decrease in proteins, nucleic acids, or carbohydrates present in an infectious agent, by assessing an immune response against an infectious agent by antibodies or immune cells, by a decrease in one or more signs or symptoms of infection (e.g., fever, pain, nausea, vomiting, abnormal blood chemistry, weight loss), by measuring hepatitis B antigen (HBsAg), HBeAg, or HB in the subject's serum. cccDNA level, by detecting the level of anti-HBsAg antibodies in the subject, by detecting the level of anti-HBsAg antibodies in the subject or plasma or tissue sample, the antibody level is determined in a biological sample (e.g., serum sample) obtained from a subject who has not received the PD-L1 treatment of the present invention. The PD-L1 mRNA level (and/or other physiological characteristics of PD-L1 disease or disorder) determined in a sample obtained from the subject can be used as a baseline or control value for the subject. After administering one or more PD-L1 dsRNA agents to a subject in the treatment methods of the present invention, one or more additional serum samples may be obtained from the subject, and the PD-L1 mRNA level and/or PD-L1 protein level in the subsequent samples may be compared to the control/baseline level and/or ratio of the subject, respectively. Such comparisons may be used to assess the onset, progression, or regression of a PD-L1-related disease or condition in a subject. For example, a PD-L1 mRNA level in a baseline sample obtained from a subject that is higher than the PD-L1 mRNA level measured in a sample obtained from the subject after administration of the PD-L1 dsRNA agent or PD-L1 antisense polynucleotide agent of the present invention to the same subject indicates that the PD-L1-related disease or condition has regressed, and indicates that the administered PD-L1 dsRNA agent of the present invention is effective for treating the PD-L1-related disease or condition.
在本發明的某些方面,針對受試者確定的PD-L1相關疾病或病症的一個或多個生理特徵值可用作對照值,以便稍後比較同一受試者的生理特徵,從而允許評估受試者相對於“基線”生理特徵的變化。因此,受試者可能存在和/或確定初始生理特徵,並且本發明的方法和化合物可用於降低受試者的PD-L1多肽和/或PD-L1多肽活性的水平,其中初始生理特徵測定值用作該受試者的對照。In certain aspects of the invention, one or more physiological characteristic values determined for a subject for a PD-L1-related disease or condition can be used as a control value to later compare the physiological characteristic of the same subject, thereby allowing the subject's changes relative to a "baseline" physiological characteristic to be assessed. Thus, a subject may have and/or have an initial physiological characteristic determined, and the methods and compounds of the invention can be used to reduce the level of PD-L1 polypeptide and/or PD-L1 polypeptide activity in the subject, wherein the initial physiological characteristic measurement value is used as a control for the subject.
使用本發明的方法,可將本發明的PD-L1 dsRNA藥劑和/或PD-L1反義多核苷酸藥劑以有效量施用於受試者以治療PD-L1疾病或病症。可通過確定PD-L1疾病或病症的一種或多種生理特徵的變化來評估本發明的施用和治療的功效。在非限制性示例中,與在先前時間點從受試者獲得的血清樣本中的給藥前脂質相比,或與非接觸對照水平(例如對照血清樣本中的PD-L1 mRNA水平)相比,從受試者獲得的血清樣本中的PD-L1 mRNA水平降低至少0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80%、90%、95%或更多。應理解的是,受試者的PD-L1 mRNA水平、PD -L1蛋白水平或血漿或組織樣本中的脂質水平、甘油三酯、膽固醇水平、游離脂肪酸水平各自與PD-L1基因表達水平相關。本發明方法的某些實施方案包括向受試者施用有效量的本發明的PD-L1 dsRNA和/或PD-L1反義劑以抑制PD-L1基因表達並從而降低受試者的PD-L1 mRNA水平、PD-L1蛋白水平,或以其他方式對受試者的PD-L1相關疾病或病症的生理特徵產生積極影響。Using the methods of the present invention, the PD-L1 dsRNA agent and/or PD-L1 antisense polynucleotide agent of the present invention can be administered to a subject in an effective amount to treat a PD-L1 disease or disorder. The efficacy of the administration and treatment of the present invention can be assessed by determining changes in one or more physiological characteristics of a PD-L1 disease or disorder. In a non-limiting example, the PD-L1 mRNA level in a serum sample obtained from a subject is reduced by at least 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95% or more compared to pre-dose lipids in a serum sample obtained from a subject at a previous time point, or compared to a non-contact control level (e.g., PD-L1 mRNA level in a control serum sample). It should be understood that the subject's PD-L1 mRNA level, PD-L1 protein level, or lipid level, triglyceride, cholesterol level, free fatty acid level in plasma or tissue samples are each associated with the PD-L1 gene expression level. Certain embodiments of the methods of the present invention include administering to the subject an effective amount of the PD-L1 dsRNA and/or PD-L1 antisense of the present invention to inhibit PD-L1 gene expression and thereby reduce the subject's PD-L1 mRNA level, PD-L1 protein level, or otherwise positively affect the subject's physiological characteristics of PD-L1-related diseases or disorders.
本發明的一些實施方案包括使用以下方法確定PD-L1相關疾病或病症的生理特徵的存在、不存在和/或變化,例如但不限於:(1)評估從一個或多個受試者獲得的一個或多個生物樣本的生理特徵;(2) 對受試者進行成像(例如但不限於獲取肝臟圖像);和 (3) 對受試者進行身體檢查。該確定可用於評估本發明的治療方法的有效性。 藥盒 Some embodiments of the present invention include determining the presence, absence and/or changes in physiological characteristics of a PD-L1-related disease or condition using methods such as, but not limited to: (1) evaluating physiological characteristics of one or more biological samples obtained from one or more subjects; (2) imaging the subject (such as, but not limited to, obtaining liver images); and (3) performing a physical examination on the subject. This determination can be used to evaluate the effectiveness of the treatment methods of the present invention. Kits
本發明的範圍內還包括包含一種或多種PD-L1 dsRNA劑和/或PD-L1反義多核苷酸劑及其在本發明方法中的使用說明的試劑盒。本發明的試劑盒可以包括一種或多種PD-L1 dsRNA劑、 PD-L1有義多核苷酸和PD-L1反義多核苷酸劑,它們可用於治療PD-L1相關疾病或病症。可以製備包含一種或多種PD-L1 dsRNA劑、 PD-L1有義多核苷酸和PD-L1反義多核苷酸劑的試劑盒以用於本發明的治療方法。本發明藥盒的組分可以以水性介質或凍乾形式包裝。本發明的藥盒可以包含被分隔開以在其中封閉地收納一個或更多個容器裝置或一系列容器裝置(例如試管、小瓶、燒瓶、瓶子、注射器等)的載體。第一容器裝置或一系列容器裝置可包含一種或更多種化合物,例如PD-L1 dsRNA藥劑和/或PD-L1有義或反義多核苷酸藥劑。第二容器裝置或一系列容器裝置可包含靶向劑、標記劑、遞送劑等,它們可作為PD-L1 dsRNA藥劑和/或PD-L1反義多核苷酸的一部分包括在本發明治療方法的實施方案中施用。Also included within the scope of the present invention are kits containing one or more PD-L1 dsRNA agents and/or PD-L1 antisense polynucleotide agents and instructions for use in the methods of the present invention. The kits of the present invention may include one or more PD-L1 dsRNA agents, PD-L1 sense polynucleotides, and PD-L1 antisense polynucleotide agents, which can be used to treat PD-L1 related diseases or conditions. Kits containing one or more PD-L1 dsRNA agents, PD-L1 sense polynucleotides, and PD-L1 antisense polynucleotide agents can be prepared for use in the treatment methods of the present invention. The components of the kit of the present invention can be packaged in an aqueous medium or in a lyophilized form. The kit of the present invention may include a carrier that is divided to contain one or more container devices or a series of container devices (e.g., test tubes, vials, flasks, bottles, syringes, etc.) in a sealed manner therein. The first container device or a series of container devices may contain one or more compounds, such as PD-L1 dsRNA agents and/or PD-L1 sense or antisense polynucleotide agents. The second container device or a series of container devices may contain targeting agents, labeling agents, delivery agents, etc., which can be included as part of the PD-L1 dsRNA agents and/or PD-L1 antisense polynucleotides for administration in the embodiments of the treatment methods of the present invention.
本發明的試劑盒還可包括說明書。說明書通常為書面形式,用於指導如何實施試劑盒所包含的治療以及根據該治療做出決定。The kit of the present invention may also include instructions. The instructions are usually in written form and are used to guide how to implement the treatment contained in the kit and make decisions based on the treatment.
以下實施例用於說明本發明實踐的具體實例,並非旨在限制本發明的範圍。本領域的普通技術人員將明白,本發明將應用於各種組合物和方法。 實施例 The following examples are used to illustrate specific examples of the practice of the present invention and are not intended to limit the scope of the present invention. A person of ordinary skill in the art will appreciate that the present invention will be applied to various compositions and methods.
實施例 1.Embodiment 1.
亞磷醯胺化合物2 Phosphamide compound 2
將在吡啶(400毫升)中的DMTrCl(232克,684毫摩爾,1.0當量),加入到化合物A異甘露醇(100克,684毫摩爾,1.0當量)的吡啶(600毫升)溶液中,將混合物在25°C下攪拌12小時。LC-MS顯示化合物A被完全消耗,並且檢測到一個具有所需質量的主峰。將所得反應混合物用水(500毫升)稀釋,用二氯甲烷(500毫升*2)萃取,將合併的有機相用鹽水(500毫升)洗滌,用Na 2SO 4乾燥並在真空中濃縮以獲得殘留物。殘餘物用柱層析(DCM/MeOH=100/1至50/1,0.1%Et 3N)純化,得到化合物B(150克,收率48.9%)的黃色固體。 DMTrCl (232 g, 684 mmol, 1.0 eq.) in pyridine (400 ml) was added to a solution of compound A isomannitol (100 g, 684 mmol, 1.0 eq.) in pyridine (600 ml), and the mixture was stirred at 25°C for 12 hours. LC-MS showed that compound A was completely consumed, and a main peak with the desired mass was detected. The resulting reaction mixture was diluted with water (500 ml), extracted with dichloromethane (500 ml*2), and the combined organic phases were washed with brine (500 ml), dried over Na 2 SO 4 and concentrated in vacuo to obtain a residue. The residue was purified by column chromatography (DCM/MeOH=100/1 to 50/1, 0.1% Et 3 N) to obtain compound B (150 g, yield 48.9%) as a yellow solid.
1H NMR: EC4783-404-P1B1_C (400 MHz, DMSO- d 6) δppm 7.46 (br d, J=7.63 Hz, 2 H) 7.28 - 7.37 (m, 6 H) 7.19 - 7.25 (m, 1 H) 6.90 (br d, J=7.88 Hz, 4 H) 4.70 (d, J=6.50 Hz, 1 H) 3.99 - 4.09 (m, 6 H) 3.88 - 3.96 (m, 2 H) 3.83 (br dd, J=7.82, 6.94 Hz, 1 H) 3.74 (s, 6 H) 3.41 (br t, J=8.13 Hz, 1 H) 3.05 (t, J=8.44 Hz, 1 H) 2.85 (br t, J=7.50 Hz, 1 H)。 1 H NMR: EC4783-404-P1B1_C (400 MHz, DMSO- d 6 ) δ ppm 7.46 (br d, J =7.63 Hz, 2 H) 7.28 - 7.37 (m, 6 H) 7.19 - 7.25 (m, 1 H) 6.90 (br d, J =7.88 Hz, 4 H) 4.70 (d, J =6.50 Hz, 1 H) 3.99 - 4.09 (m, 6 H) 3.88 - 3.96 (m, 2 H) 3.83 (br dd, J =7.82, 6.94 Hz, 1 H) 3.74 (s, 6 H) 3.41 (br t, J =8.13 Hz, 1H) 3.05 (t, J =8.44 Hz, 1 H) 2.85 (br t, J =7.50 Hz, 1 H).
在25°C,N 2氣氛下,向化合物 B(80.0g,178mmol,1.0 eq)的DCM(800mL)溶液中逐滴加入 2H-四唑(0.45M,436mL,1.1 eq),然後將化合物 C(80.6g,267mmol,85.0mL,1.5 eq)的DCM(200mL)溶液逐滴加入該混合物中。將反應混合物在25°C下攪拌1.0小時。LC-MS顯示化合物 B已完全消耗,檢測到一個具有所需質量的主峰。將所得反應混合物冷卻至-20°C並倒入冰冷的飽和NaHCO 3(500mL)中,用DCM(500mL*3)萃取,將合併的有機層用飽和NaHCO 3/鹽水=1:1(300mL/300mL)洗滌,經Na 2SO 4乾燥並在真空(35°C)下濃縮以獲得殘餘物(100mL)。將殘餘物通過柱色譜法(Al 2O 3,DCM/MeOH=100/1至50/1,0.1%Et 3N)純化,得到化合物2(77g,119mmol,產率66.5%)為白色固體。 To a solution of compound B (80.0 g, 178 mmol, 1.0 eq ) in DCM (800 mL) was added 2H -tetrazole (0.45 M, 436 mL, 1.1 eq ) dropwise at 25 °C under N2 atmosphere, and then a solution of compound C (80.6 g, 267 mmol, 85.0 mL, 1.5 eq ) in DCM (200 mL) was added dropwise to the mixture. The reaction mixture was stirred at 25 °C for 1.0 h. LC-MS showed that compound B was completely consumed and a major peak with the desired mass was detected. The resulting reaction mixture was cooled to -20°C and poured into ice-cold saturated NaHCO 3 (500 mL), extracted with DCM (500 mL*3), the combined organic layers were washed with saturated NaHCO 3 / brine = 1:1 (300 mL/300 mL), dried over Na 2 SO 4 and concentrated under vacuum (35°C) to obtain a residue (100 mL). The residue was purified by column chromatography (Al 2 O 3 , DCM/MeOH = 100/1 to 50/1, 0.1% Et 3 N) to give compound 2 (77 g, 119 mmol, yield 66.5%) as a white solid.
1H NMR: EC4783-423-P1B1_C (400 MHz, DMSO- d 6) δppm 7.22 (br d, J=7.50 Hz, 2 H) 7.05 - 7.14 (m, 6 H) 6.96 - 7.02 (m, 1 H) 6.67 (br dd, J=8.82, 1.81 Hz, 4 H) 3.95 - 4.07 (m, 2 H) 3.73 - 3.83 (m, 1 H) 3.62 - 3.72 (m, 2 H) 3.48 - 3.53 (m, 6 H) 3.27 - 3.37 (m, 3 H) 3.11 (s, 6 H) 2.82 (td, J=8.54, 2.31 Hz, 1 H) 2.47 - 2.63 (m, 3 H) 2.28 (br d, J=1.63 Hz, 3 H) 0.82 - 1.00 (m, 13 H)。 1 H NMR: EC4783-423-P1B1_C (400 MHz, DMSO- d 6 ) δ ppm 7.22 (br d, J=7.50 Hz, 2 H) 7.05 - 7.14 (m, 6 H) 6.96 - 7.02 (m, 1 H) 6.67 (br dd, J=8.82, 1.81 Hz, 4 H) 3.95 - 4.07 (m, 2 H) 3.73 - 3.83 (m, 1 H) 3.62 - 3.72 (m, 2 H) 3.48 - 3.53 (m, 6 H) 3.27 - 3.37 (m, 3 H) 3.11 (s, 6 H) 2.82 (td, J=8.54, 2.31 Hz, 1 H) 2.47 - 2.63 (m, 3 H) 2.28 (br d, J=1.63 Hz, 3 H) 0.82 - 1.00 (m, 13 H).
亞磷醯胺化合物1: Phosphamide compound 1:
在0-5 °C的N 2氣氛下,向化合物 B(500 mg,1.11 mmol,1.0 eq) 的DCM (5.0 mL) 溶液中添加化合物 D(607 mg,3.34 mmol,3.0 eq) 和 DIEA (432 mg,3.34 mmol,582 μL,3.0 eq),將混合物在25°C下攪拌1.0小時。LC-MS顯示化合物 B已完全消耗,LC-MS上出現幾個新峰,檢測到約70.9%的所需化合物。將所得反應混合物冷卻至-20°C並倒入冷的(0-5°C)飽和NaHCO 3(5.0mL)溶液中,用DCM(5.0mL*2)萃取,將合併的有機層用冷的(0-5°C)飽和NaHCO 3/鹽水=1:1(5.0mL/5.0mL)洗滌,經Na 2SO 4乾燥並真空濃縮得到殘餘物(~5mL)。殘餘物經柱層析純化(鹼性Al 2O 3,石油醚/乙酸乙酯=10/1至5/1,0.1%Et 3N),得到化合物 1(280mg,471μmol,產率42.3%),為白色固體。 To a solution of compound B (500 mg, 1.11 mmol, 1.0 eq) in DCM (5.0 mL) were added compound D (607 mg, 3.34 mmol, 3.0 eq) and DIEA (432 mg, 3.34 mmol, 582 μL, 3.0 eq) under N 2 atmosphere at 0-5 °C, and the mixture was stirred at 25 °C for 1.0 hour. LC-MS showed that compound B was completely consumed, several new peaks appeared on LC-MS, and about 70.9% of the desired compound was detected. The resulting reaction mixture was cooled to -20°C and poured into a cold (0-5°C) saturated NaHCO 3 (5.0 mL) solution, extracted with DCM (5.0 mL*2), and the combined organic layers were washed with cold (0-5°C) saturated NaHCO 3 / brine = 1:1 (5.0 mL/5.0 mL), dried over Na 2 SO 4 and concentrated in vacuo to obtain a residue (~5 mL). The residue was purified by column chromatography (basic Al 2 O 3 , petroleum ether/ethyl acetate = 10/1 to 5/1, 0.1% Et 3 N) to obtain compound 1 (280 mg, 471 μmol, yield 42.3%) as a white solid.
1H NMR: EC10615-49-P1N (400 MHz, DMSO- d 6) δppm 7.44 (br d, J=7.63 Hz, 2 H), 7.31 (br t, J=7.94 Hz, 6 H), 7.18 - 7.26 (m, 1 H), 6.89 (brd, J=8.00 Hz, 4 H), 4.08 - 4.13 (m, 1 H), 3.95 - 4.03 (m, 1 H), 3.84 - 3.93 (m, 1 H), 3.77 - 3.83 (m, 1 H), 3.74 (s, 6 H), 3.43 - 3.53 (m, 3 H), 3.38 (br d, J=6.75 Hz, 1 H), 2.94 - 3.04 (m, 1 H), 2.70 - 2.85 (m, 1 H), 1.09 - 1.15 (m, 12 H), 1.07 (br s, 3 H)。 1 H NMR: EC10615-49-P1N (400 MHz, DMSO- d 6 ) δ ppm 7.44 (br d, J =7.63 Hz, 2 H), 7.31 (br t, J =7.94 Hz, 6 H), 7.18 - 7.26 (m, 1 H), 6.89 (brd, J =8.00 Hz, 4 H), 4.08 - 4.13 (m, 1 H), 3.95 - 4.03 (m, 1 H), 3.84 - 3.93 (m, 1 H), 3.77 - 3.83 (m, 1 H), 3.74 (s, 6 H), 3.43 - 3.53 (m, 3 H), 3.38 (br d, J =6.75 Hz, 1 H), 2.94 - 3.04 (m, 1 H), 2.70 - 2.85 (m, 1 H), 1.09 - 1.15 (m, 12 H), 1.07 (br s, 3 H).
可以根據本文所述方法和/或現有技術(例如但不限於US426,220和WO02/36743)製備其他亞磷醯胺。Other phosphoramidites may be prepared according to the methods described herein and/or according to prior art (e.g., but not limited to, US 426,220 and WO 02/36743).
實施例2. 製備包含本發明的亞磷醯胺單體的固體載體 代表大孔胺甲基聚乙烯樹脂載體部分 Example 2. Preparation of a solid carrier containing the phosphoramidite monomer of the present invention Represents the macroporous aminomethyl polyethylene resin carrier part
在氮氣保護下將二氯甲烷(19.50kg)加入50L玻璃反應釜中,開啟攪拌;控制溫度在20~30℃,將DMTrimann(1.47kg)、三乙胺(1.50kg)、4-二甲氨基吡啶(0.164kg)和琥珀酸酐(1.34kg)加入玻璃反應釜中;在20~30℃下保溫18h,取樣,終止反應。向反應體系中加入飽和碳酸氫鈉溶液(22.50kg),攪拌10~20min,分層。分離有機相,水相用二氯甲烷萃取兩次,合併有機相,用無水硫酸鈉乾燥,過濾,真空濃縮,得殘餘物為灰色至灰白色固體1.83kg。Under nitrogen protection, add dichloromethane (19.50 kg) to a 50L glass reactor and start stirring; control the temperature at 20-30°C, add DMTrimann (1.47 kg), triethylamine (1.50 kg), 4-dimethylaminopyridine (0.164 kg) and succinic anhydride (1.34 kg) to the glass reactor; keep warm at 20-30°C for 18 hours, take a sample, and terminate the reaction. Add saturated sodium bicarbonate solution (22.50 kg) to the reaction system, stir for 10-20 minutes, and separate the layers. Separate the organic phase, extract the aqueous phase twice with dichloromethane, combine the organic phases, dry with anhydrous sodium sulfate, filter, and concentrate in vacuum to obtain a residue of 1.83 kg of gray to off-white solid.
將N,N-二甲基甲醯胺(23.50kg)加入100L玻璃釜中,攪拌。控制溫度為20~30℃,在氮氣保護下,將上步的產物、O-苯並三唑四甲基脲六氟磷酸鹽(0.33kg)和N,N-二異丙基乙胺(0.13kg)通過固體加料漏斗加入上述100L玻璃釜中,攪拌10~30分鐘,卸料至50L鋅桶中待用。將大孔胺甲基樹脂(3.25kg)(購自天津南開合成科技有限公司,批號HA2X1209,負載量0.48mmol/g)通過固體進料漏斗加入上述100L固相合成反應器中,控制溫度為20~30℃,將N,N-二甲基甲醯胺(21.00kg+21.00kg)和上一步鋅桶中的反應液加入固相合成反應器中,體系進行保溫反應,並跟蹤固體負載至≥250umol/g,負載檢測方法為紫外。在氮氣壓力下過濾,用N, N-二甲基甲醯胺洗滌濾餅三次(26.00kg+26.10kg+26.00kg),將濾餅留在釜內。將CAP.A(50%乙腈和50%醋酐,4.40kg+4.42kg+4.30kg)和CAP.B (20%吡啶和30% N-甲基咪唑和50%乙腈,4.40kg+4.40kg+4.47kg)加入80L玻璃釜中,攪拌3~8min後使用。此操作重複三次進行蓋帽,將乙腈(18.00kg+18.00kg+18.00kg+17.50kg+17.50kg)加入固相合成釜中。通氮氣鼓泡10~30min後壓濾。此操作重複四次,將固相合成釜中的濾餅用氮氣吹掃2~4h後轉入50L壓濾罐中。溫度控制在15~30℃,繼續乾燥,乾燥後得到黃色至白色固體產品,重量:3.516kg。Add N, N-dimethylformamide (23.50 kg) to a 100 L glass kettle and stir. Control the temperature to 20-30 ° C. Under nitrogen protection, add the product of the previous step, O-benzotriazole tetramethyluronium hexafluorophosphate (0.33 kg) and N, N-diisopropylethylamine (0.13 kg) to the above 100 L glass kettle through a solid addition funnel, stir for 10-30 minutes, and discharge into a 50 L zinc barrel for standby use. The macroporous amine methyl resin (3.25 kg) (purchased from Tianjin Nankai Synthesis Technology Co., Ltd., batch number HA2X1209, loading 0.48 mmol/g) was added to the above 100L solid phase synthesis reactor through a solid feeding funnel, and the temperature was controlled at 20-30°C. N, N-dimethylformamide (21.00 kg + 21.00 kg) and the reaction solution in the zinc barrel in the previous step were added to the solid phase synthesis reactor. The system was kept warm and the solid loading was tracked to ≥ 250 umol/g. The loading detection method was ultraviolet. Filter under nitrogen pressure, wash the filter cake three times with N, N-dimethylformamide (26.00 kg + 26.10 kg + 26.00 kg), and leave the filter cake in the kettle. Add CAP.A (50% acetonitrile and 50% acetic anhydride, 4.40kg+4.42kg+4.30kg) and CAP.B (20% pyridine and 30% N-methylimidazole and 50% acetonitrile, 4.40kg+4.40kg+4.47kg) to a 80L glass reactor and stir for 3~8min before use. Repeat this operation three times to cap the reactor, and add acetonitrile (18.00kg+18.00kg+18.00kg+17.50kg+17.50kg) to the solid phase synthesis reactor. Bubble nitrogen for 10~30min and filter. Repeat this operation four times, purge the filter cake in the solid phase synthesis reactor with nitrogen for 2~4h and transfer it to a 50L filter press. The temperature was controlled at 15-30°C and the drying was continued. After drying, a yellow to white solid product was obtained with a weight of 3.516 kg.
異甘露醇殘基通過本領域技術人員熟知的方法(例如反向脫鹼基(invab)方法)添加到寡核苷酸鏈的5'-端或3'-端,並進一步添加到目標基團中。The isomannitol residue is added to the 5'-end or 3'-end of the oligonucleotide chain by a method well known to those skilled in the art (e.g., the invab method), and further added to the target group.
實施例3. PD -L1 RNAi劑的合成。Example 3. Synthesis of PD-L1 RNAi agent.
上述表2-3中列出的PD-L1試劑雙鏈體是按照以下一般程序合成的:The PD-L1 reagent bichains listed in Table 2-3 above were synthesized according to the following general procedure:
使用基於亞磷醯胺化學的成熟固相合成方法,在寡核苷酸合成儀上合成siRNA的有義鏈和反義鏈序列。寡核苷酸鏈的延伸通過 4 步循環實現:脫保護、縮合、加帽和用於添加每個核苷酸的氧化或硫化步驟。合成是在由可控孔徑玻璃 (CPG,1000 Å) 製成的固體載體上進行的。單體亞磷醯胺可以從商業來源購買,也可以是實施例1中的亞磷醯胺化合物。本文中的亞磷醯胺化合物可以作為單體亞磷醯胺附著到 3' 端,並進一步附著到 CPG 固體載體上。在附著在 5' 端的情況下,亞磷醯胺化合物可用於最終的偶聯反應,並且如果需要可以進一步與靶配體結合。The sense and antisense sequences of siRNA are synthesized on an oligonucleotide synthesizer using a well-established solid phase synthesis method based on phosphoramidite chemistry. Extension of the oligonucleotide chain is achieved through a 4-step cycle: deprotection, condensation, capping, and oxidation or sulfurization steps for the addition of each nucleotide. The synthesis is carried out on a solid support made of controlled pore glass (CPG, 1000 Å). Monomer phosphoramidites can be purchased from commercial sources or can be the phosphoramidite compounds in Example 1. The phosphoramidite compounds herein can be attached to the 3' end as monomeric phosphoramidites and further attached to a CPG solid support. Once attached at the 5' end, the phosphoramidite compound can be used for the final coupling reaction and further conjugated to the target ligand if desired.
具有GalNAc配體簇(GLS-5*或GLS-15*亞磷醯胺作為非限制性實例)的亞磷醯胺在WO2023/045995A1(全文併入本文)中公開。對於用於體外篩選的siRNA(表2),合成以2µmol規模進行,而對於用於體內測試的siRNA(表3),合成以5µmol或更大的規模進行。在GalNAc配體(GLO-n亞磷醯胺作為非限制性實例在WO2023/045995A1(全文併入本文)中公開))附著在有義鏈的3'端的情況下,使用GalNAc配體附著的CPG固體載體。在GalNAc配體(作為非限制性示例,GLS-5*或GLS-15*附著在有義鏈的5'端,GLS-5*或GLS-15*具有GalNAc配體簇的亞磷醯胺在WO2023/045995A1(以其整體併入本文)中公開)附著在有義鏈的5'端的情況下,使用GalNAc亞磷醯胺進行最後的偶聯反應。將3%二氯甲烷中的三氯乙酸(TCA)用於4,4'-二甲氧基三苯甲基保護基(DMT)的脫保護。5-乙硫基-1H-四唑用作活化劑。THF/Py/H 2O中的I 2和吡啶/MeCN中的苯乙醯二硫化物(PADS)分別用於氧化和硫化反應。在最後的固相合成步驟之後,將固體載體結合的寡聚物裂解,並通過用1:1體積的40wt.%甲胺水溶液和28%氫氧化銨溶液處理來去除保護基。為了合成用於體外篩選的siRNA,濃縮粗混合物。將剩餘的固體溶解在1.0 M NaOAc中,並加入冰冷的EtOH以沉澱出單鏈產物作為鈉鹽,該鈉鹽無需進一步純化即可用於退火。為了合成用於體內測試的siRNA,通過離子配對反相HPLC(IP-RP-HPLC)進一步純化粗單鏈產物。將來自IP-RP-HPLC的純化單鏈寡核苷酸產物通過溶解在1.0 M NaOAc中轉化為鈉鹽並通過加入冰冷的EtOH沉澱。將等摩爾互補的有義鏈和反義鏈寡核苷酸在水中退火,形成雙鏈siRNA產物,凍乾後得到蓬鬆的白色固體。 Phosphoramidites with GalNAc ligand clusters (GLS-5* or GLS-15* phosphoramidites as non-limiting examples) are disclosed in WO2023/045995A1 (incorporated herein in its entirety). For siRNAs for in vitro screening (Table 2), synthesis was performed at a 2 µmol scale, while for siRNAs for in vivo testing (Table 3), synthesis was performed at a 5 µmol or greater scale. In the case where the GalNAc ligand (GLO-n phosphoramidite as a non-limiting example disclosed in WO2023/045995A1 (incorporated herein in its entirety)) is attached to the 3' end of the sense strand, a GalNAc ligand-attached CPG solid support is used. In the case where a GalNAc ligand (as a non-limiting example, GLS-5* or GLS-15* is attached to the 5' end of the sense chain, GLS-5* or GLS-15* having a GalNAc ligand cluster is disclosed in WO2023/045995A1 (incorporated herein in its entirety)) is attached to the 5' end of the sense chain, the final coupling reaction is performed using GalNAc phosphoamidite. 3% trichloroacetic acid (TCA) in dichloromethane is used for deprotection of 4,4'-dimethoxytrityl protecting group (DMT). 5-Ethylthio-1H-tetrazole is used as an activator. I 2 in THF/Py/H 2 O and phenylacetyl disulfide (PADS) in pyridine/MeCN are used for oxidation and sulfidation reactions, respectively. After the last solid phase synthesis step, the solid support bound oligomers were cleaved and the protecting groups were removed by treatment with a 1:1 volume of 40 wt.% aqueous methylamine and 28% ammonium hydroxide solution. To synthesize siRNA for in vitro screening, the crude mixture was concentrated. The remaining solid was dissolved in 1.0 M NaOAc and ice-cold EtOH was added to precipitate the single-chain product as the sodium salt, which was used for annealing without further purification. To synthesize siRNA for in vivo testing, the crude single-chain product was further purified by ion pairing reverse phase HPLC (IP-RP-HPLC). The purified single-stranded oligonucleotide product from IP-RP-HPLC was converted to sodium salt by dissolution in 1.0 M NaOAc and precipitated by adding ice-cold EtOH. Equimolar complementary sense and antisense oligonucleotides were annealed in water to form a double-stranded siRNA product, which was lyophilized to obtain a fluffy white solid.
在某些研究中,將包含 GalNAc 的靶向基團(本文中也稱為 GalNAc 遞送化合物)附著到有義鏈 5' 端的方法包括在固相合成的最後偶聯步驟中使用 GalNAc 亞磷醯胺(GLS-5* 或 GLS-15* 亞磷醯胺),使用例如在進行將核苷酸添加到有義鏈 5' 端的寡核苷酸鏈增長時所使用的合成過程。In certain studies, methods for attaching a GalNAc-containing targeting group (also referred to herein as a GalNAc delivery compound) to the 5' end of the sense strand include using a GalNAc phosphoramidite (GLS-5* or GLS-15* phosphoramidite) in the final coupling step of a solid phase synthesis, using, for example, the same synthetic process used in performing oligonucleotide chain extension to add nucleotides to the 5' end of the sense strand.
在一些研究中,將包含GalNAc的靶向基團附著到有義鏈3'端的方法包括使用包含GLO-n的固體載體(CPG)。在一些研究中,將包含GalNAc的靶向基團附著到有義鏈3'端的方法包括通過酯鍵將GalNAc靶向基團附著到CPG固體載體上,並在合成有義鏈時使用附著有GalNAc靶向基團的前述所得的CPG固體載體,從而得到附著在有義鏈3'端的GalNAc靶向基團。In some studies, the method of attaching a targeting group comprising GalNAc to the 3' end of the sense chain includes using a solid support (CPG) comprising GLO-n. In some studies, the method of attaching a targeting group comprising GalNAc to the 3' end of the sense chain includes attaching the GalNAc targeting group to the CPG solid support via an ester bond, and using the aforementioned CPG solid support to which the GalNAc targeting group is attached when synthesizing the sense chain, thereby obtaining the GalNAc targeting group attached to the 3' end of the sense chain.
可以通過本領域技術人員熟知的方法,例如反向脫鹼基殘基(invab)方法將imann殘基添加到寡核苷酸鏈的5'端或3'端,和/或進一步添加到靶向GalNAc的靶向基團中。The imann residue can be added to the 5' or 3' end of the oligonucleotide chain by methods well known to those skilled in the art, such as the invab method, and/or further added to the targeting group targeting GalNAc.
實施例4. PD-L1 siRNA雙鏈體的 體外篩選 Example 4. In vitro screening of PD-L1 siRNA duplexes
SNU-387細胞在含有10% FBS、鏈黴素和穀氨醯胺的RPMI培養基中,在37°C下,在5% CO2的環境下生長至接近匯合,然後通過胰蛋白酶消化從培養皿中釋放出來。轉染方法是將每孔14.8 uL Opti-MEM和0.2 uL Lipofectamine®RNAiMax添加每孔5uL siRNA雙鏈體放入96孔板中,室溫下孵育15分鐘。然後將含有~2x10 4SNU-387細胞的80uL完全生長培養基添加到siRNA混合物中。在RNA純化之前,將細胞孵育24小時。在0.5nM和0.05nM最終siRNA濃度下進行單劑量實驗。分離mRNA並通過qPCR確定mRNA(靶基因)的表達,使用管家基因GAPDH進行標準化。通過比較siRNA處理樣本和陰性對照處理樣本的mRNA(靶基因)表達來計算敲低百分比。所用的雙鏈序列與表2中所示的序列相對應,其結果總結在表5中。 SNU-387 cells were grown to near confluence in RPMI medium containing 10% FBS, streptomycin, and glutamine at 37°C in an atmosphere of 5% CO2 and then released from the culture dishes by trypsinization. Transfection was performed by adding 14.8 uL Opti-MEM and 0.2 uL Lipofectamine® RNAiMax per well to 5uL siRNA duplex per well in a 96-well plate and incubating for 15 minutes at room temperature. 80uL complete growth medium containing ~2x10 4 SNU-387 cells was then added to the siRNA mixture. Cells were incubated for 24 hours before RNA purification. Single-dose experiments were performed at 0.5 nM and 0.05 nM final siRNA concentrations. mRNA was isolated and expression of mRNA (target gene) was determined by qPCR, using the housekeeping gene GAPDH for normalization. Percent knockdown was calculated by comparing mRNA (target gene) expression in siRNA-treated samples to negative control-treated samples. The duplex sequences used correspond to those shown in Table 2, and the results are summarized in Table 5.
表5提供了使用各種PD-L1 RNAi藥物抑制PD-L1表達的
體外研究的實驗結果。所用的雙鏈序列與表2中所示的序列相對應。
實施例5. PD-L1 siRNA雙鏈的體內測試Example 5. In vivo testing of PD-L1 siRNA duplex
第1天,雌性C57BL/6J小鼠(每組4隻,4-6周齡)通過靜脈注射編碼人類PD-L1和螢光素酶基因的腺相關病毒8(AAV8)載體溶液進行感染。第8天,給小鼠皮下注射單劑量3mg/kg PD-L1 siRNA藥物或PBS。在第8天、siRNA給藥前、第15天、第22天和/或第29天採集血液樣本。分離血漿樣本並根據製造商推薦的方案測量血漿樣本的螢光素酶活性。由於人類PD-L1水平的表達與螢光素酶的表達水平相關,因此通過比較siRNA治療組治療前後樣本中的螢光素酶活性來計算剩餘PD-L1的百分比,並通過對照治療組樣本在相同時間段內的螢光素酶活性變化進行標準化。結果匯總在表6-8中。On day 1, female C57BL/6J mice (4-6 weeks old, 4 mice per group) were infected by intravenous injection of adeno-associated virus 8 (AAV8) vector solution encoding human PD-L1 and luciferase genes. On day 8, mice were subcutaneously injected with a single dose of 3 mg/kg PD-L1 siRNA drug or PBS. Blood samples were collected on day 8, before siRNA administration, day 15, day 22, and/or day 29. Plasma samples were separated and luciferase activity was measured according to the manufacturer's recommended protocol. Since the expression of human PD-L1 levels is correlated with the expression level of luciferase, the percentage of remaining PD-L1 was calculated by comparing the luciferase activity in the samples of the siRNA treatment group before and after treatment, and normalized by the change in luciferase activity of the samples of the control treatment group during the same time period. The results are summarized in Tables 6-8.
表6.在AAV- PD-L1轉導小鼠中,PD-L1 siRNA單次3 mpk皮下劑量篩選。小鼠血清中人類PD-L1的減少百分比根據siRNA 給藥前的PD-L1表達和PBS對照組進行標準化。
表7.在AAV- PD-L1轉導小鼠中,PD-L1 siRNA單次3 mpk皮下劑量篩選。小鼠血清中人類PD-L1的減少百分比根據siRNA給藥前的PD-L1表達和PBS對照組進行標準化。
表8.在AAV- PD-L1轉導小鼠中,PD-L1 siRNA單次3mpk皮下劑量篩選。小鼠血清中人類PD-L1的減少百分比根據siRNA給藥前的PD-L1表達和PBS對照組進行標準化。
實施例6. PD-L1 siRNA雙鏈的體內測試Example 6. In vivo testing of PD-L1 siRNA duplex
第1天,雌性C57BL/6J小鼠(每組4隻,4-6周齡)通過靜脈注射編碼人類PD-L1和螢光素酶基因的腺相關病毒8(AAV8)載體溶液進行感染。第8天,小鼠皮下注射單劑量3mg/kg PD-L1siRNA藥物或PBS。在第8天,siRNA給藥前,第15天和第22天採集血液樣本,分離血漿樣本,並根據製造商推薦的方案測量血漿樣本的螢光素酶活性。由於人類PD-L1水平的表達與螢光素酶的表達水平相關,通過比較siRNA治療組治療前後樣本中的螢光素酶活性來計算剩餘PD-L1的百分比,並通過對照治療組樣本在相同時間段內的螢光素酶活性變化進行標準化。結果總結在表9中。On day 1, female C57BL/6J mice (4-6 weeks old, 4 mice per group) were infected by intravenous injection of adeno-associated virus 8 (AAV8) vector solution encoding human PD-L1 and luciferase genes. On day 8, mice were subcutaneously injected with a single dose of 3 mg/kg PD-L1 siRNA drug or PBS. Blood samples were collected on day 8, before siRNA administration, on days 15 and 22, and plasma samples were separated and luciferase activity was measured in plasma samples according to the manufacturer's recommended protocol. Since the expression of human PD-L1 levels is correlated with the expression level of luciferase, the percentage of remaining PD-L1 was calculated by comparing the luciferase activity in the samples of the siRNA treatment group before and after treatment, and normalized by the change in luciferase activity of the samples of the control treatment group during the same period of time. The results are summarized in Table 9.
表9. 在AAV- PD-L1轉導小鼠中,PD-L1 siRNA單次3 mpk皮下劑量篩選。小鼠血清中人類PD-L1的減少百分比根據siRNA給藥前的PD-L1表達和PBS對照組進行標準化。
儘管本文已描述和說明了本發明的幾個實施例,但本領域的普通技術人員將容易地設想出各種其他手段和/或結構,用於執行功能和/或獲得結果和/或本文所述的一個或多個優點,並且這些變化和/或修改中的每一個都被視為在本發明的範圍內。更一般地,本領域的技術人員將容易地理解,本文所述的所有參數、尺寸、材料和配置都旨在作為示例,並且實際的參數、尺寸、材料和/或配置將取決於使用本發明教導的特定應用。本領域的技術人員將認識到,或能夠僅使用常規實驗就確定本文所述的本發明的具體實施例的許多等效物。因此,應理解,前述實施例僅以示例的方式呈現,並且在所附申請專利範圍及其等效物的範圍內;本發明可以以不同於具體描述和要求的方式實施。本發明涉及本文所述的每個單獨的特徵、系統、物品、材料和/或方法。此外,兩個或多個這樣的特徵、系統、物品、材料和/或方法的任意組合,如果這樣的特徵、系統、物品、材料和/或方法不互相矛盾的話,都包括在本發明的範圍內。Although several embodiments of the present invention have been described and illustrated herein, a person of ordinary skill in the art will readily devise various other means and/or structures for performing the functions and/or obtaining the results and/or one or more advantages described herein, and each of these variations and/or modifications is considered to be within the scope of the present invention. More generally, a person of ordinary skill in the art will readily appreciate that all parameters, dimensions, materials, and configurations described herein are intended to be examples, and that actual parameters, dimensions, materials, and/or configurations will depend on the specific application in which the teachings of the present invention are used. A person of ordinary skill in the art will recognize, or be able to determine using only routine experimentation, many equivalents to the specific embodiments of the present invention described herein. Therefore, it should be understood that the foregoing embodiments are presented by way of example only and are within the scope of the appended patent applications and their equivalents; the present invention may be implemented in a manner different from that specifically described and claimed. The present invention is directed to each individual feature, system, article, material and/or method described herein. In addition, any combination of two or more such features, systems, articles, materials and/or methods, if such features, systems, articles, materials and/or methods are not mutually inconsistent, are included in the scope of the present invention.
本文定義和使用的所有定義應被理解為控制詞典定義、通過引用併入的文件中的定義和/或定義術語的通常含義。All definitions, as defined and used herein, should be understood to control over dictionary definitions, definitions in documents incorporated by reference, and/or ordinary meanings of the defined terms.
本說明書和申請專利範圍中所使用的不定冠詞“a”和“an”,除非另有明確說明,應理解為“至少一個”。The indefinite articles "a" and "an" used in this specification and claims should be understood to mean "at least one" unless expressly stated otherwise.
說明書和申請專利範圍中所用的短語“和/或”應理解為所結合的要素的“任一或兩者”,即,要素在某些情況下是結合存在的,而在另一些情況下是分離存在的。除了“和/或”條款中明確標識的要素之外,還可以選擇性地存在其他要素,無論這些要素與明確標識的要素相關還是不相關,除非另有明確說明。The phrase "and/or" used in the specification and claims should be understood to mean "either or both" of the combined elements, that is, the elements are present in combination in some cases and separately in other cases. In addition to the elements expressly identified in the "and/or" clause, other elements may optionally be present, whether related or unrelated to the elements expressly identified, unless expressly stated otherwise.
本申請中引用或提及的所有參考文獻、專利和專利申請和出版物均以引用的方式全文併入本文中。All references, patents and patent applications and publications cited or referred to in this application are incorporated herein by reference in their entirety.
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