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SG11201912273WA - Charge-tagged nucleotides and methods of use thereof - Google Patents

Charge-tagged nucleotides and methods of use thereof

Info

Publication number
SG11201912273WA
SG11201912273WA SG11201912273WA SG11201912273WA SG11201912273WA SG 11201912273W A SG11201912273W A SG 11201912273WA SG 11201912273W A SG11201912273W A SG 11201912273WA SG 11201912273W A SG11201912273W A SG 11201912273WA SG 11201912273W A SG11201912273W A SG 11201912273WA
Authority
SG
Singapore
Prior art keywords
charge
methods
tagged nucleotides
tagged
nucleotides
Prior art date
Application number
SG11201912273WA
Other languages
English (en)
Inventor
Jeffrey Mandell
Silvia Gravina
Sergio Peisajovich
Kaitlin Pugliese
Yin Nah Teo
Xiangyuan Yang
Original Assignee
Illumina Inc
Illumina Singapore Pte Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Illumina Inc, Illumina Singapore Pte Ltd filed Critical Illumina Inc
Publication of SG11201912273WA publication Critical patent/SG11201912273WA/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2521/00Reaction characterised by the enzymatic activity
    • C12Q2521/50Other enzymatic activities
    • C12Q2521/543Immobilised enzyme(s)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/101Modifications characterised by incorporating non-naturally occurring nucleotides, e.g. inosine
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122Massive parallel sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/113Nucleic acid detection characterized by the use of physical, structural and functional properties the label being electroactive, e.g. redox labels
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B70/00Tags or labels specially adapted for combinatorial chemistry or libraries, e.g. fluorescent tags or bar codes

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
SG11201912273WA 2018-02-16 2019-02-19 Charge-tagged nucleotides and methods of use thereof SG11201912273WA (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201862710461P 2018-02-16 2018-02-16
US201862710362P 2018-02-16 2018-02-16
US201862710327P 2018-02-16 2018-02-16
US201862710333P 2018-02-16 2018-02-16
PCT/US2019/018565 WO2019161381A1 (fr) 2018-02-16 2019-02-19 Nucléotides marqués par une charge et leurs procédés d'utilisation

Publications (1)

Publication Number Publication Date
SG11201912273WA true SG11201912273WA (en) 2020-01-30

Family

ID=67619079

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201912273WA SG11201912273WA (en) 2018-02-16 2019-02-19 Charge-tagged nucleotides and methods of use thereof

Country Status (16)

Country Link
US (2) US10851131B2 (fr)
EP (1) EP3752631A4 (fr)
JP (2) JP6938690B2 (fr)
KR (2) KR102430323B1 (fr)
CN (1) CN111164222A (fr)
AU (2) AU2019221691B2 (fr)
BR (1) BR112019027628A2 (fr)
CA (1) CA3067433C (fr)
IL (1) IL271303A (fr)
MX (1) MX2019015011A (fr)
PH (1) PH12019502905A1 (fr)
RU (1) RU2751359C2 (fr)
SA (1) SA519410901B1 (fr)
SG (1) SG11201912273WA (fr)
WO (1) WO2019161381A1 (fr)
ZA (1) ZA201908276B (fr)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2019161381A1 (fr) 2018-02-16 2019-08-22 Illumina, Inc. Nucléotides marqués par une charge et leurs procédés d'utilisation
KR102429576B1 (ko) * 2020-04-29 2022-08-03 경희대학교 산학협력단 전도성 태그를 이용한 dna 염기서열을 식별하는 방법 및 장치
JP2023524079A (ja) * 2020-04-30 2023-06-08 アリゾナ・ボード・オブ・リージェンツ・オン・ビハーフ・オブ・アリゾナ・ステイト・ユニバーシティー 生体高分子の配列決定のための方法
US20250109433A1 (en) * 2023-09-22 2025-04-03 Illumina, Inc. Macromolecule blocks for nanopore sequencing

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WO1991006678A1 (fr) 1989-10-26 1991-05-16 Sri International Sequençage d'adn
US7057026B2 (en) 2001-12-04 2006-06-06 Solexa Limited Labelled nucleotides
US7414116B2 (en) 2002-08-23 2008-08-19 Illumina Cambridge Limited Labelled nucleotides
US20090186343A1 (en) * 2003-01-28 2009-07-23 Visigen Biotechnologies, Inc. Methods for preparing modified biomolecules, modified biomolecules and methods for using same
EP1725572B1 (fr) * 2003-11-05 2017-05-31 AGCT GmbH Composes nucleotidiques macromoleculaires et leurs procedes d'utilisation
EP4105644A3 (fr) 2006-03-31 2022-12-28 Illumina, Inc. Systèmes et procédés pour analyse de séquençage par synthèse
ES2614078T3 (es) 2008-03-31 2017-05-29 Pacific Biosciences Of California, Inc. Generación de polimerasas modificadas para precisión mejorada en secuenciación de una única molécula
EP2346889B1 (fr) 2008-09-03 2015-11-11 Quantumdx Group Limited Conception, synthese et utilisation de nucleotides synthetiques comprenant des rapporteurs ioniques
US20100311144A1 (en) 2009-06-05 2010-12-09 Life Technologies Corporation Mutant dna polymerases
US8986930B2 (en) 2010-07-12 2015-03-24 Pacific Biosciences Of California, Inc. Sequencing reactions with alkali metal cations for pulse width control
US9164053B2 (en) 2011-09-26 2015-10-20 The Regents Of The University Of California Electronic device for monitoring single molecule dynamics
JP5970049B2 (ja) * 2013-11-28 2016-08-17 日本特殊陶業株式会社 スパークプラグおよびその製造方法
CA2943952A1 (fr) * 2014-03-24 2015-10-01 The Trustees Of Columbia University In The City Of New York Procedes chimiques pour produire des nucleotides etiquetes
CN107075579B (zh) * 2014-07-15 2021-10-08 亿明达股份有限公司 生物化学激活的电子装置
EP3294908B1 (fr) 2015-05-12 2021-06-23 Illumina, Inc. Procédés de séquençage d'acides nucléiques
EP3332033B1 (fr) * 2015-08-06 2021-04-21 Pacific Biosciences of California, Inc. Systèmes et procédés de séquençage par nanofet à molécule simple
US10975426B2 (en) * 2015-09-10 2021-04-13 Roche Sequencing Solutions, Inc. Polypeptide tagged nucleotides and use thereof in nucleic acid sequencing by nanopore detection
CN108472121A (zh) * 2015-11-20 2018-08-31 加利福尼亚太平洋生物科学股份有限公司 受保护的染料标记的试剂
US11225687B2 (en) * 2016-04-04 2022-01-18 The Trustees Of Columbia University In The City Of New York DNA sequencing by synthesis with nucleotide analogues and Raman detection
CN109072297B (zh) 2016-04-22 2022-09-13 加利福尼亚太平洋生物科学股份有限公司 使用增强的核苷酸特异性三元复合物形成检测的核酸测序方法和系统
US10584379B2 (en) 2016-04-29 2020-03-10 Omniome, Inc. Method of nucleic acid sequence determination
US10655174B2 (en) 2016-05-27 2020-05-19 Roche Sequencing Solutions, Inc. Tagged multi-nucleotides useful for nucleic acid sequencing
JP6833079B2 (ja) 2017-08-01 2021-02-24 イラミーナ インコーポレーテッド 電界効果センサ
WO2019161381A1 (fr) 2018-02-16 2019-08-22 Illumina, Inc. Nucléotides marqués par une charge et leurs procédés d'utilisation

Also Published As

Publication number Publication date
EP3752631A4 (fr) 2021-11-10
US11578094B2 (en) 2023-02-14
US10851131B2 (en) 2020-12-01
ZA201908276B (en) 2022-07-27
WO2019161381A1 (fr) 2019-08-22
CN111164222A (zh) 2020-05-15
KR102430323B1 (ko) 2022-08-08
US20200123193A1 (en) 2020-04-23
RU2019141361A3 (fr) 2021-06-15
BR112019027628A2 (pt) 2020-08-25
US20210179657A1 (en) 2021-06-17
JP6938690B2 (ja) 2021-09-22
KR20210138136A (ko) 2021-11-18
CA3067433C (fr) 2022-11-22
PH12019502905A1 (en) 2020-09-14
KR102330071B1 (ko) 2021-11-23
AU2019221691A1 (en) 2020-01-16
EP3752631A1 (fr) 2020-12-23
WO2019161381A9 (fr) 2019-11-28
KR20200028344A (ko) 2020-03-16
IL271303A (en) 2020-01-30
MX2019015011A (es) 2021-01-08
SA519410901B1 (ar) 2022-07-17
RU2019141361A (ru) 2021-06-15
AU2019221691B2 (en) 2022-04-28
JP2020534790A (ja) 2020-12-03
RU2751359C2 (ru) 2021-07-13
AU2022202417A1 (en) 2022-05-05
JP2022000029A (ja) 2022-01-04
CA3067433A1 (fr) 2019-08-22

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