RU2019111924A3 - - Google Patents
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- Publication number
- RU2019111924A3 RU2019111924A3 RU2019111924A RU2019111924A RU2019111924A3 RU 2019111924 A3 RU2019111924 A3 RU 2019111924A3 RU 2019111924 A RU2019111924 A RU 2019111924A RU 2019111924 A RU2019111924 A RU 2019111924A RU 2019111924 A3 RU2019111924 A3 RU 2019111924A3
- Authority
- RU
- Russia
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/10—Ploidy or copy number detection
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Physics & Mathematics (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Chemical & Material Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- General Health & Medical Sciences (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Biotechnology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Evolutionary Biology (AREA)
- Medical Informatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Theoretical Computer Science (AREA)
- Genetics & Genomics (AREA)
- Molecular Biology (AREA)
- Organic Chemistry (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Electrotherapy Devices (AREA)
- Soil Working Implements (AREA)
- Image Processing (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201662398354P | 2016-09-22 | 2016-09-22 | |
| US62/398,354 | 2016-09-22 | ||
| US201762447065P | 2017-01-17 | 2017-01-17 | |
| US62/447,065 | 2017-01-17 | ||
| PCT/US2017/052766 WO2018057770A1 (en) | 2016-09-22 | 2017-09-21 | Somatic copy number variation detection |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| RU2019111924A RU2019111924A (ru) | 2020-10-22 |
| RU2019111924A3 true RU2019111924A3 (ru) | 2020-10-22 |
| RU2768718C2 RU2768718C2 (ru) | 2022-03-24 |
Family
ID=60002106
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| RU2019111924A RU2768718C2 (ru) | 2016-09-22 | 2017-09-21 | Обнаружение соматического варьирования числа копий |
Country Status (11)
| Country | Link |
|---|---|
| US (1) | US20230207048A1 (ru) |
| EP (1) | EP3516564A1 (ru) |
| JP (1) | JP6839268B2 (ru) |
| KR (2) | KR102711907B1 (ru) |
| CN (2) | CN110024035B (ru) |
| AU (2) | AU2017332381A1 (ru) |
| CA (3) | CA3213915A1 (ru) |
| MX (1) | MX2019003344A (ru) |
| NZ (1) | NZ751798A (ru) |
| RU (1) | RU2768718C2 (ru) |
| WO (1) | WO2018057770A1 (ru) |
Families Citing this family (13)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DK3246416T3 (da) | 2011-04-15 | 2024-09-02 | Univ Johns Hopkins | Sikkert sekventeringssystem |
| ES2886507T5 (es) | 2012-10-29 | 2024-11-15 | Univ Johns Hopkins | Prueba de Papanicolaou para cánceres de ovario y de endometrio |
| WO2017027653A1 (en) | 2015-08-11 | 2017-02-16 | The Johns Hopkins University | Assaying ovarian cyst fluid |
| CN111868260B (zh) | 2017-08-07 | 2025-02-21 | 约翰斯霍普金斯大学 | 用于评估和治疗癌症的方法和材料 |
| AU2018367488B2 (en) | 2017-11-16 | 2021-09-16 | Illumina, Inc. | Systems and methods for determining microsatellite instability |
| WO2019209884A1 (en) | 2018-04-23 | 2019-10-31 | Grail, Inc. | Methods and systems for screening for conditions |
| CN109920485B (zh) * | 2018-12-29 | 2023-10-31 | 浙江安诺优达生物科技有限公司 | 对测序序列进行变异模拟的方法及其应用 |
| CN114502744B (zh) * | 2019-12-11 | 2023-06-23 | 深圳华大基因股份有限公司 | 一种基于血液循环肿瘤dna的拷贝数变异检测方法和装置 |
| CN110993022B (zh) * | 2019-12-20 | 2023-09-05 | 北京优迅医学检验实验室有限公司 | 检测拷贝数扩增的方法和装置及建立检测拷贝数扩增的动态基线的方法和装置 |
| CN115516108A (zh) | 2020-02-14 | 2022-12-23 | 约翰斯霍普金斯大学 | 评估核酸的方法和材料 |
| CN113192555A (zh) * | 2021-04-21 | 2021-07-30 | 杭州博圣医学检验实验室有限公司 | 一种通过计算差异等位基因测序深度检测二代测序数据smn基因拷贝数的方法 |
| CN113823353B (zh) * | 2021-08-12 | 2024-02-09 | 上海厦维医学检验实验室有限公司 | 基因拷贝数扩增检测方法、装置及可读介质 |
| WO2025072716A1 (en) * | 2023-09-28 | 2025-04-03 | Integrated Dna Technologies, Inc. | Copy number variant detection |
Family Cites Families (33)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5846719A (en) | 1994-10-13 | 1998-12-08 | Lynx Therapeutics, Inc. | Oligonucleotide tags for sorting and identification |
| US5750341A (en) | 1995-04-17 | 1998-05-12 | Lynx Therapeutics, Inc. | DNA sequencing by parallel oligonucleotide extensions |
| ATE364718T1 (de) | 1997-04-01 | 2007-07-15 | Solexa Ltd | Verfahren zur vervielfältigung von nukleinsäure |
| US6969488B2 (en) | 1998-05-22 | 2005-11-29 | Solexa, Inc. | System and apparatus for sequential processing of analytes |
| US7001792B2 (en) | 2000-04-24 | 2006-02-21 | Eagle Research & Development, Llc | Ultra-fast nucleic acid sequencing device and a method for making and using the same |
| US7057026B2 (en) | 2001-12-04 | 2006-06-06 | Solexa Limited | Labelled nucleotides |
| SI3363809T1 (sl) | 2002-08-23 | 2020-08-31 | Illumina Cambridge Limited | Modificirani nukleotidi za polinukleotidno sekvenciranje |
| GB0321306D0 (en) | 2003-09-11 | 2003-10-15 | Solexa Ltd | Modified polymerases for improved incorporation of nucleotide analogues |
| JP2007525571A (ja) | 2004-01-07 | 2007-09-06 | ソレクサ リミテッド | 修飾分子アレイ |
| EP1828412B2 (en) | 2004-12-13 | 2019-01-09 | Illumina Cambridge Limited | Improved method of nucleotide detection |
| WO2006120433A1 (en) | 2005-05-10 | 2006-11-16 | Solexa Limited | Improved polymerases |
| GB0514936D0 (en) | 2005-07-20 | 2005-08-24 | Solexa Ltd | Preparation of templates for nucleic acid sequencing |
| US7329860B2 (en) | 2005-11-23 | 2008-02-12 | Illumina, Inc. | Confocal imaging methods and apparatus |
| JP5147084B2 (ja) * | 2006-11-21 | 2013-02-20 | 公立大学法人秋田県立大学 | Ｄｎａマイクロアレイデータにおける欠陥を検出する方法 |
| US8262900B2 (en) | 2006-12-14 | 2012-09-11 | Life Technologies Corporation | Methods and apparatus for measuring analytes using large scale FET arrays |
| US8349167B2 (en) | 2006-12-14 | 2013-01-08 | Life Technologies Corporation | Methods and apparatus for detecting molecular interactions using FET arrays |
| AU2007334393A1 (en) | 2006-12-14 | 2008-06-26 | Life Technologies Corporation | Methods and apparatus for measuring analytes using large scale FET arrays |
| US20100137143A1 (en) | 2008-10-22 | 2010-06-03 | Ion Torrent Systems Incorporated | Methods and apparatus for measuring analytes |
| EP2419729A4 (en) * | 2009-04-13 | 2015-11-25 | Canon Us Life Sciences Inc | FAST PROCEDURE FOR PATTERN RECOGNITION, MACHINE TRAINING AND AUTOMATED GENOTYPIC CLASSIFICATION THROUGH CORRELATION ANALYSIS OF DYNAMIC SIGNALS |
| EP2526415B1 (en) * | 2010-01-19 | 2017-05-03 | Verinata Health, Inc | Partition defined detection methods |
| US20120035860A1 (en) * | 2010-04-29 | 2012-02-09 | Akmaev Viatcheslav R | GC Wave Correction for Array-Based Comparative Genomic Hybridization |
| US8725422B2 (en) * | 2010-10-13 | 2014-05-13 | Complete Genomics, Inc. | Methods for estimating genome-wide copy number variations |
| JP6073902B2 (ja) | 2011-10-06 | 2017-02-01 | セクエノム， インコーポレイテッド | 遺伝的変異の非侵襲的評価のための方法およびプロセス |
| EP2844771A4 (en) * | 2012-05-04 | 2015-12-02 | Complete Genomics Inc | METHOD FOR DETERMINING THE ABSOLUTE GENOME-WIDE COPY COUNTER CHANGES OF COMPLEX TUMORS |
| ES2656023T3 (es) * | 2012-05-14 | 2018-02-22 | Bgi Genomics Co., Ltd. | Procedimiento, sistema y medio legible por ordenador para determinar la información de bases en una región predeterminada del genoma del feto |
| AU2013204536A1 (en) * | 2012-07-20 | 2014-02-06 | Verinata Health, Inc. | Detecting and classifying copy number variation in a cancer genome |
| KR102393608B1 (ko) * | 2012-09-04 | 2022-05-03 | 가던트 헬쓰, 인크. | 희귀 돌연변이 및 카피수 변이를 검출하기 위한 시스템 및 방법 |
| CN105722994B (zh) * | 2013-06-17 | 2020-12-18 | 维里纳塔健康公司 | 用于确定性染色体中的拷贝数变异的方法 |
| BR112016007401B1 (pt) * | 2013-10-04 | 2023-04-11 | Sequenom, Inc. | Método para determinar a presença ou ausência de uma aneuploidia cromossômica em uma amostra |
| EP4227947A1 (en) | 2013-10-21 | 2023-08-16 | Verinata Health, Inc. | Method for improving the sensitivity of detection in determining copy number variations |
| US20150347676A1 (en) * | 2014-05-30 | 2015-12-03 | Sequenom, Inc. | Chromosome representation determinations |
| JP6659672B2 (ja) * | 2014-05-30 | 2020-03-04 | ベリナタ ヘルス インコーポレイテッド | 胎児染色体部分異数性およびコピー数変動の検出 |
| CN105760712B (zh) * | 2016-03-01 | 2019-03-26 | 西安电子科技大学 | 一种基于新一代测序的拷贝数变异检测方法 |
-
2017
- 2017-09-21 CA CA3213915A patent/CA3213915A1/en active Pending
- 2017-09-21 JP JP2019515874A patent/JP6839268B2/ja not_active Expired - Fee Related
- 2017-09-21 KR KR1020227022321A patent/KR102711907B1/ko active Active
- 2017-09-21 AU AU2017332381A patent/AU2017332381A1/en not_active Abandoned
- 2017-09-21 CN CN201780070781.3A patent/CN110024035B/zh active Active
- 2017-09-21 MX MX2019003344A patent/MX2019003344A/es unknown
- 2017-09-21 RU RU2019111924A patent/RU2768718C2/ru active
- 2017-09-21 CA CA3214358A patent/CA3214358A1/en active Pending
- 2017-09-21 CN CN202311358695.6A patent/CN117352050A/zh active Pending
- 2017-09-21 NZ NZ751798A patent/NZ751798A/en not_active IP Right Cessation
- 2017-09-21 CA CA3037917A patent/CA3037917C/en active Active
- 2017-09-21 US US16/333,933 patent/US20230207048A1/en active Pending
- 2017-09-21 WO PCT/US2017/052766 patent/WO2018057770A1/en not_active Ceased
- 2017-09-21 KR KR1020197011535A patent/KR102416441B1/ko active Active
- 2017-09-21 EP EP17778119.2A patent/EP3516564A1/en not_active Withdrawn
-
2021
- 2021-01-12 AU AU2021200154A patent/AU2021200154B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| EP3516564A1 (en) | 2019-07-31 |
| KR20190058556A (ko) | 2019-05-29 |
| RU2768718C2 (ru) | 2022-03-24 |
| JP6839268B2 (ja) | 2021-03-03 |
| CN110024035B (zh) | 2023-11-14 |
| CA3214358A1 (en) | 2018-03-29 |
| KR102711907B1 (ko) | 2024-09-27 |
| NZ751798A (en) | 2022-02-25 |
| US20230207048A1 (en) | 2023-06-29 |
| MX2019003344A (es) | 2019-09-04 |
| AU2017332381A1 (en) | 2019-04-18 |
| AU2021200154B2 (en) | 2022-12-15 |
| RU2019111924A (ru) | 2020-10-22 |
| JP2019537095A (ja) | 2019-12-19 |
| AU2021200154A1 (en) | 2021-03-18 |
| CA3037917A1 (en) | 2018-03-29 |
| CN117352050A (zh) | 2024-01-05 |
| KR102416441B1 (ko) | 2022-07-04 |
| CN110024035A (zh) | 2019-07-16 |
| CA3213915A1 (en) | 2018-03-29 |
| KR20220098812A (ko) | 2022-07-12 |
| CA3037917C (en) | 2024-05-28 |
| WO2018057770A1 (en) | 2018-03-29 |