EP3994283A4 - METHOD OF SEARCHING FOR SPECIFIC ORGANISMS IN AN INDIVIDUAL - Google Patents

METHOD OF SEARCHING FOR SPECIFIC ORGANISMS IN AN INDIVIDUAL Download PDF

Info

Publication number: EP3994283A4
Authority: EP; European Patent Office
Prior art keywords: searching; individual; specific organisms; organisms; specific
Prior art date: 2019-08-02
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.): Withdrawn

Application number

EP20849772.7A

Other languages

German (de)

French (fr)

Other versions

EP3994283A2 (en

Inventor

Sabine HAZAN

Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)

Individual

Original Assignee

Individual

Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)

2019-08-02

Filing date

2020-07-31

Publication date

2022-10-12

2020-07-31 Application filed by Individual filed Critical Individual

2022-05-11 Publication of EP3994283A2 publication Critical patent/EP3994283A2/en

2022-10-12 Publication of EP3994283A4 publication Critical patent/EP3994283A4/en

Status Withdrawn legal-status Critical Current

Classifications

- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Landscapes

Chemical & Material Sciences (AREA)
Life Sciences & Earth Sciences (AREA)
Organic Chemistry (AREA)
Health & Medical Sciences (AREA)
Proteomics, Peptides & Aminoacids (AREA)
Zoology (AREA)
Wood Science & Technology (AREA)
Engineering & Computer Science (AREA)
Analytical Chemistry (AREA)
Genetics & Genomics (AREA)
Immunology (AREA)
Biotechnology (AREA)
Molecular Biology (AREA)
Microbiology (AREA)
Physics & Mathematics (AREA)
Biochemistry (AREA)
Bioinformatics & Cheminformatics (AREA)
General Engineering & Computer Science (AREA)
General Health & Medical Sciences (AREA)
Biophysics (AREA)
Virology (AREA)
Pathology (AREA)
Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

EP20849772.7A 2019-08-02 2020-07-31 METHOD OF SEARCHING FOR SPECIFIC ORGANISMS IN AN INDIVIDUAL Withdrawn EP3994283A4 (en)

Applications Claiming Priority (5)

Application Number	Priority Date	Filing Date	Title
US201962882367P	2019-08-02	2019-08-02
US201962892409P	2019-08-27	2019-08-27
US202062991190P	2020-03-18	2020-03-18
US202063002486P	2020-03-31	2020-03-31
PCT/US2020/044605 WO2021026025A2 (en)	2019-08-02	2020-07-31	Method of testing for specific organisms in an individual

Publications (2)

Publication Number	Publication Date
EP3994283A2 EP3994283A2 (en)	2022-05-11
EP3994283A4 true EP3994283A4 (en)	2022-10-12

Family

ID=74503987

Family Applications (1)

Application Number	Title	Priority Date	Filing Date
EP20849772.7A Withdrawn EP3994283A4 (en)	2019-08-02	2020-07-31	METHOD OF SEARCHING FOR SPECIFIC ORGANISMS IN AN INDIVIDUAL

Country Status (4)

Country	Link
EP (1)	EP3994283A4 (en)
AU (1)	AU2020326600A1 (en)
CA (1)	CA3149221A1 (en)
WO (1)	WO2021026025A2 (en)

Families Citing this family (2)

* Cited by examiner, † Cited by third party
Publication number	Priority date	Publication date	Assignee	Title
CN114369671A (en) *	2021-11-25	2022-04-19	上海锐翌生物科技有限公司	Marker microorganism for rheumatic arthritis and application thereof
CN114410809A (en) *	2021-12-08	2022-04-29	上海金翌生物科技有限公司	Slow-transmission constipation marker microorganism and application thereof

Citations (3)

* Cited by examiner, † Cited by third party
Publication number	Priority date	Publication date	Assignee	Title
WO2014138999A1 (en) *	2013-03-14	2014-09-18	University Of Ottawa	Methods for the diagnosis and treatment of inflammatory bowel disease
WO2016164402A1 (en) *	2015-04-06	2016-10-13	Oklahoma Medical Research Foundation	Methods of diagnosing and treating autoimmune disease
WO2018085817A1 (en) *	2016-11-07	2018-05-11	Zymo Research Corporation	Automated method for release of nucleic acids from microbial samples

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number	Priority date	Publication date	Assignee	Title
CN101341410A (en) *	2005-12-21	2009-01-07	霍夫曼—拉罗奇有限公司	Method for assessing colorectal cancer by measuring hemoglobin and M2-PK in stool samples
FR2945545B1 (en) *	2009-05-14	2011-08-05	Univ Aix Marseille Ii	METHOD FOR DETECTION OF PROCARYOTE DNA EXTRACTED FROM A SAMPLE SAMPLE

2020
- 2020-07-31 AU AU2020326600A patent/AU2020326600A1/en active Pending
- 2020-07-31 EP EP20849772.7A patent/EP3994283A4/en not_active Withdrawn
- 2020-07-31 CA CA3149221A patent/CA3149221A1/en active Pending
- 2020-07-31 WO PCT/US2020/044605 patent/WO2021026025A2/en not_active Ceased

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number	Priority date	Publication date	Assignee	Title
WO2014138999A1 (en) *	2013-03-14	2014-09-18	University Of Ottawa	Methods for the diagnosis and treatment of inflammatory bowel disease
WO2016164402A1 (en) *	2015-04-06	2016-10-13	Oklahoma Medical Research Foundation	Methods of diagnosing and treating autoimmune disease
WO2018085817A1 (en) *	2016-11-07	2018-05-11	Zymo Research Corporation	Automated method for release of nucleic acids from microbial samples

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
DUYTSCHAEVER GWEN ET AL: "Cross-Sectional and Longitudinal Comparisons of the Predominant Fecal Microbiota Compositions of a Group of Pediatric Patients with Cystic Fibrosis and Their Healthy Siblings", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 77, no. 22, 15 November 2011 (2011-11-15), US, pages 8015 - 8024, XP055803783, ISSN: 0099-2240, Retrieved from the Internet <URL:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3208981/pdf/zam8015.pdf> DOI: 10.1128/AEM.05933-11 *
HOGUE STEPHANIE R ET AL: "A Customized At-Home Stool Collection Protocol for Use in Microbiome Studies Conducted in Cancer Patient Populations", MICROBIAL ECOLOGY, SPRINGER US, NEW YORK, vol. 78, no. 4, 30 March 2019 (2019-03-30), pages 1030 - 1034, XP036935475, ISSN: 0095-3628, [retrieved on 20190330], DOI: 10.1007/S00248-019-01346-2 *
KNOLL REBECCA L. ET AL: "Gut microbiota differs between children with Inflammatory Bowel Disease and healthy siblings in taxonomic and functional composition: a metagenomic analysis", AMERICAN JOURNAL OF PHYSIOLOGY - GASTROINTESTINAL AND LIVER PHYSIOLOGY, vol. 312, no. 4, 1 April 2017 (2017-04-01), US, pages G327 - G339, XP055957978, ISSN: 0193-1857, DOI: 10.1152/ajpgi.00293.2016 *
LI NING ET AL: "Correlation of Gut Microbiome Between ASD Children and Mothers and Potential Biomarkers for Risk Assessment", GENOMICS PROTEOMICS AND BIOINFORMATICS, vol. 17, no. 1, 23 April 2019 (2019-04-23), CN, pages 26 - 38, XP055803780, ISSN: 1672-0229, Retrieved from the Internet <URL:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520911/pdf/main.pdf> DOI: 10.1016/j.gpb.2019.01.002 *
PASCAL VICTORIA ET AL: "A microbial signature for Crohn's disease", GUT MICROBIOTA, vol. 66, no. 5, 1 May 2017 (2017-05-01), UK, pages 813 - 822, XP055958121, ISSN: 0017-5749, Retrieved from the Internet <URL:https://gut.bmj.com/content/gutjnl/66/5/813.full.pdf> DOI: 10.1136/gutjnl-2016-313235 *
SOURAV SEN GUPTA ET AL: "Metagenome of the gut of a malnourished child", GUT PATHOGENS, BIOMED CENTRAL LTD, LONDON, UK, vol. 3, no. 1, 20 May 2011 (2011-05-20), pages 7, XP021102178, ISSN: 1757-4749, DOI: 10.1186/1757-4749-3-7 *

Also Published As

Publication number	Publication date
EP3994283A2 (en)	2022-05-11
WO2021026025A3 (en)	2021-03-18
CA3149221A1 (en)	2021-02-11
WO2021026025A2 (en)	2021-02-11
AU2020326600A1 (en)	2022-02-24

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Legal Events

Date	Code	Title	Description
2021-02-12	STAA	Information on the status of an ep patent application or granted ep patent	Free format text: STATUS: THE INTERNATIONAL PUBLICATION HAS BEEN MADE
2022-04-08	PUAI	Public reference made under article 153(3) epc to a published international application that has entered the european phase	Free format text: ORIGINAL CODE: 0009012
2022-04-08	STAA	Information on the status of an ep patent application or granted ep patent	Free format text: STATUS: REQUEST FOR EXAMINATION WAS MADE
2022-05-11	17P	Request for examination filed	Effective date: 20220202
2022-05-11	AK	Designated contracting states	Kind code of ref document: A2 Designated state(s): AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR
2022-10-12	A4	Supplementary search report drawn up and despatched	Effective date: 20220914
2022-10-12	RIC1	Information provided on ipc code assigned before grant	Ipc: C12Q 1/70 20060101ALI20220908BHEP Ipc: C12Q 1/6883 20180101ALI20220908BHEP Ipc: G16B 30/00 20190101ALI20220908BHEP Ipc: G01N 33/574 20060101ALI20220908BHEP Ipc: C12Q 1/689 20180101AFI20220908BHEP
2022-11-09	DAV	Request for validation of the european patent (deleted)
2022-11-09	DAX	Request for extension of the european patent (deleted)
2023-06-21	P01	Opt-out of the competence of the unified patent court (upc) registered	Effective date: 20230516
2025-03-21	STAA	Information on the status of an ep patent application or granted ep patent	Free format text: STATUS: THE APPLICATION HAS BEEN WITHDRAWN
2025-04-23	18W	Application withdrawn	Effective date: 20250317